BLASTX 7.6.2
Query= UN05857 /QuerySize=1051
(1050 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G27490.1 | Symbols: | 3' exoribonuclease fami... 468 3e-132
TAIR9_protein||AT3G61620.1 | Symbols: RRP41 | RRP41; 3'-5'-exori... 107 1e-023
TAIR9_protein||AT3G61620.2 | Symbols: RRP41 | RRP41; 3'-5'-exori... 107 1e-023
TAIR9_protein||AT3G46210.1 | Symbols: | 3' exoribonuclease fami... 74 2e-013
TAIR9_protein||AT3G46210.2 | Symbols: | 3' exoribonuclease fami... 74 2e-013
TAIR9_protein||AT3G46210.3 | Symbols: | 3' exoribonuclease fami... 74 2e-013
TAIR9_protein||AT3G46210.4 | Symbols: | 3' exoribonuclease fami... 74 2e-013
TAIR9_protein||AT3G46210.5 | Symbols: | 3' exoribonuclease fami... 74 2e-013
TAIR9_protein||AT5G14580.1 | Symbols: | polyribonucleotide nucl... 49 6e-006
>TAIR9_protein||AT4G27490.1 | Symbols: | 3' exoribonuclease family domain
1-containing protein | chr4:13739961-13741647 FORWARD
Length = 257
Score = 468 bits (1204), Expect = 3e-132
Identities = 236/258 (91%), Positives = 244/258 (94%), Gaps = 1/258 (0%)
Frame = +3
Query: 96 MAAKQGAAATTYSPKIMARTRPPIFKGSDLDWTRPDGRGFHQCRPALLQTGAVSAASGSA 275
MAAK GAA TYSPKI+ R+R PIFK SDLDW+RPDGRGFHQCRPALLQTGAVS+ASGSA
Sbjct: 1 MAAKPGAATPTYSPKIVGRSRLPIFKDSDLDWSRPDGRGFHQCRPALLQTGAVSSASGSA 60
Query: 276 YAEFGNTKVIVSVFGPRESKKATSYSDVGRLDCNVSYTNFASPTLGSQGTDHKEYSSMLH 455
YAEFGNTKVIVSVFGPRESKKA YSDVGRL+CNVSYTNFASPTLG QGTDHKEYSSMLH
Sbjct: 61 YAEFGNTKVIVSVFGPRESKKAMVYSDVGRLNCNVSYTNFASPTLG-QGTDHKEYSSMLH 119
Query: 456 KALEGVIMMETFPKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITAVSVSC 635
KALEGVIMMETFPKTTVDVFALVLESGGSDL V+ISCA LALADAGIMMYDLITAVSVSC
Sbjct: 120 KALEGVIMMETFPKTTVDVFALVLESGGSDLSVLISCASLALADAGIMMYDLITAVSVSC 179
Query: 636 IGKSLMIDPVTEEEGCEDGSFMMTCMPSRGEITQLTITGEWTTPNINEAMQLCVDACSKL 815
IGKSLMIDPVTEEEGCEDGSFMMTCMPSR EITQLTITGEWTTPNINEAMQLC+DA SKL
Sbjct: 180 IGKSLMIDPVTEEEGCEDGSFMMTCMPSRYEITQLTITGEWTTPNINEAMQLCLDASSKL 239
Query: 816 GEIMRDCLKQAASASDE* 869
GEIMRDCLKQ+ASASDE*
Sbjct: 240 GEIMRDCLKQSASASDE* 257
>TAIR9_protein||AT3G61620.1 | Symbols: RRP41 | RRP41; 3'-5'-exoribonuclease/ RNA
binding | chr3:22801382-22802910 REVERSE
Length = 242
Score = 107 bits (266), Expect = 1e-023
Identities = 66/221 (29%), Positives = 108/221 (48%), Gaps = 4/221 (1%)
Frame = +3
Query: 195 RPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRE--SKKATSYSDVGRL 368
R DGR F++ R + + G VS A GSA E GNTKVI +V+GPRE +K +D +
Sbjct: 10 RLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQQKKNDHAVV 69
Query: 369 DCNVSYTNFASPTLGSQGTDHK--EYSSMLHKALEGVIMMETFPKTTVDVFALVLESGGS 542
C S F++ Q D + E S ++ + +E I+ E P + +D+F VL++ G
Sbjct: 70 LCEYSMAQFSTGDRRRQKFDRRSTELSLVIRQTMEACILTELMPHSQIDIFLQVLQADGG 129
Query: 543 DLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSR 722
I+ A LALADAGI M DL + S + + ++D E+ + +P
Sbjct: 130 TRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGADVTVGILPKL 189
Query: 723 GEITQLTITGEWTTPNINEAMQLCVDACSKLGEIMRDCLKQ 845
+++ L + + L + C + E +R+ L++
Sbjct: 190 DKVSLLQMDAKLPMETFETVFALASEGCKAIAERIREVLQE 230
>TAIR9_protein||AT3G61620.2 | Symbols: RRP41 | RRP41; 3'-5'-exoribonuclease/ RNA
binding | chr3:22801382-22802910 REVERSE
Length = 242
Score = 107 bits (266), Expect = 1e-023
Identities = 66/221 (29%), Positives = 108/221 (48%), Gaps = 4/221 (1%)
Frame = +3
Query: 195 RPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRE--SKKATSYSDVGRL 368
R DGR F++ R + + G VS A GSA E GNTKVI +V+GPRE +K +D +
Sbjct: 10 RLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQQKKNDHAVV 69
Query: 369 DCNVSYTNFASPTLGSQGTDHK--EYSSMLHKALEGVIMMETFPKTTVDVFALVLESGGS 542
C S F++ Q D + E S ++ + +E I+ E P + +D+F VL++ G
Sbjct: 70 LCEYSMAQFSTGDRRRQKFDRRSTELSLVIRQTMEACILTELMPHSQIDIFLQVLQADGG 129
Query: 543 DLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSR 722
I+ A LALADAGI M DL + S + + ++D E+ + +P
Sbjct: 130 TRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLDLNYVEDSAGGADVTVGILPKL 189
Query: 723 GEITQLTITGEWTTPNINEAMQLCVDACSKLGEIMRDCLKQ 845
+++ L + + L + C + E +R+ L++
Sbjct: 190 DKVSLLQMDAKLPMETFETVFALASEGCKAIAERIREVLQE 230
>TAIR9_protein||AT3G46210.1 | Symbols: | 3' exoribonuclease family domain
1-containing protein | chr3:16976960-16978489 REVERSE
Length = 240
Score = 74 bits (179), Expect = 2e-013
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 9/161 (5%)
Frame = +3
Query: 201 DGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRESKKATSYSDVGRLDCNV 380
DGR +Q RP + GSA G+TKV+ +V+GP+ K ++
Sbjct: 7 DGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAE------KA 60
Query: 381 SYTNFASPTLGSQGTDHKEYSSMLHKALEGVIMMETFPKTTVDVFALVLESGGSDLPVVI 560
+ P G G KEY +L + ++ + ++ P TT V V+ GS LP I
Sbjct: 61 CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120
Query: 561 SCAGLALADAGIMMYDLITAVSVSCIGKS--LMIDPVTEEE 677
+ A AL DAGI M L A+ C+ ++ L++DP EE
Sbjct: 121 NAACAALVDAGIPMKHLAVAI-CCCLAENGYLVLDPNKLEE 160
>TAIR9_protein||AT3G46210.2 | Symbols: | 3' exoribonuclease family domain
1-containing protein | chr3:16976960-16978489 REVERSE
Length = 240
Score = 74 bits (179), Expect = 2e-013
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 9/161 (5%)
Frame = +3
Query: 201 DGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRESKKATSYSDVGRLDCNV 380
DGR +Q RP + GSA G+TKV+ +V+GP+ K ++
Sbjct: 7 DGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAE------KA 60
Query: 381 SYTNFASPTLGSQGTDHKEYSSMLHKALEGVIMMETFPKTTVDVFALVLESGGSDLPVVI 560
+ P G G KEY +L + ++ + ++ P TT V V+ GS LP I
Sbjct: 61 CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120
Query: 561 SCAGLALADAGIMMYDLITAVSVSCIGKS--LMIDPVTEEE 677
+ A AL DAGI M L A+ C+ ++ L++DP EE
Sbjct: 121 NAACAALVDAGIPMKHLAVAI-CCCLAENGYLVLDPNKLEE 160
>TAIR9_protein||AT3G46210.3 | Symbols: | 3' exoribonuclease family domain
1-containing protein | chr3:16976960-16978489 REVERSE
Length = 240
Score = 74 bits (179), Expect = 2e-013
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 9/161 (5%)
Frame = +3
Query: 201 DGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRESKKATSYSDVGRLDCNV 380
DGR +Q RP + GSA G+TKV+ +V+GP+ K ++
Sbjct: 7 DGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAE------KA 60
Query: 381 SYTNFASPTLGSQGTDHKEYSSMLHKALEGVIMMETFPKTTVDVFALVLESGGSDLPVVI 560
+ P G G KEY +L + ++ + ++ P TT V V+ GS LP I
Sbjct: 61 CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120
Query: 561 SCAGLALADAGIMMYDLITAVSVSCIGKS--LMIDPVTEEE 677
+ A AL DAGI M L A+ C+ ++ L++DP EE
Sbjct: 121 NAACAALVDAGIPMKHLAVAI-CCCLAENGYLVLDPNKLEE 160
>TAIR9_protein||AT3G46210.4 | Symbols: | 3' exoribonuclease family domain
1-containing protein | chr3:16976960-16978489 REVERSE
Length = 240
Score = 74 bits (179), Expect = 2e-013
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 9/161 (5%)
Frame = +3
Query: 201 DGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRESKKATSYSDVGRLDCNV 380
DGR +Q RP + GSA G+TKV+ +V+GP+ K ++
Sbjct: 7 DGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAE------KA 60
Query: 381 SYTNFASPTLGSQGTDHKEYSSMLHKALEGVIMMETFPKTTVDVFALVLESGGSDLPVVI 560
+ P G G KEY +L + ++ + ++ P TT V V+ GS LP I
Sbjct: 61 CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120
Query: 561 SCAGLALADAGIMMYDLITAVSVSCIGKS--LMIDPVTEEE 677
+ A AL DAGI M L A+ C+ ++ L++DP EE
Sbjct: 121 NAACAALVDAGIPMKHLAVAI-CCCLAENGYLVLDPNKLEE 160
>TAIR9_protein||AT3G46210.5 | Symbols: | 3' exoribonuclease family domain
1-containing protein | chr3:16976960-16978489 REVERSE
Length = 240
Score = 74 bits (179), Expect = 2e-013
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 9/161 (5%)
Frame = +3
Query: 201 DGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRESKKATSYSDVGRLDCNV 380
DGR +Q RP + GSA G+TKV+ +V+GP+ K ++
Sbjct: 7 DGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAE------KA 60
Query: 381 SYTNFASPTLGSQGTDHKEYSSMLHKALEGVIMMETFPKTTVDVFALVLESGGSDLPVVI 560
+ P G G KEY +L + ++ + ++ P TT V V+ GS LP I
Sbjct: 61 CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120
Query: 561 SCAGLALADAGIMMYDLITAVSVSCIGKS--LMIDPVTEEE 677
+ A AL DAGI M L A+ C+ ++ L++DP EE
Sbjct: 121 NAACAALVDAGIPMKHLAVAI-CCCLAENGYLVLDPNKLEE 160
>TAIR9_protein||AT5G14580.1 | Symbols: | polyribonucleotide
nucleotidyltransferase, putative | chr5:4697612-4703013 REVERSE
Length = 992
Score = 49 bits (114), Expect = 6e-006
Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 15/190 (7%)
Frame = +3
Query: 135 PKIMARTRPPIFKGSDL-DWTRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVI-- 305
PK + R + + + D R DGR + RP ++ + A GSA G+T+V+
Sbjct: 343 PKAVDTVRKKVVRSRMISDGFRVDGRHVDEVRPIYCESHYLPALHGSALFSRGDTQVLCT 402
Query: 306 VSVFGPRESKKATSYSDVG----RLDCNVSYTNFASPTLGSQGTDHKE---YSSMLHKAL 464
V++ P E++ S VG R + S+ + + +G +G ++ + ++ KAL
Sbjct: 403 VTLGAPAEAQSLDSL--VGPPKKRFMLHYSFPPYCTNEVGKRGGLNRREVGHGTLAEKAL 460
Query: 465 EGVIMMETFPKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGK 644
V+ E T+ + + V+ S GS + +AL DAGI + + VSV I
Sbjct: 461 LAVLPPEEAFPYTIRINSEVMSSDGSTSMASVCGGSMALMDAGIPLRAHVAGVSVGLITD 520
Query: 645 SLMIDPVTEE 674
+DP + E
Sbjct: 521 ---VDPSSGE 527
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,585,692,879
Number of Sequences: 33410
Number of Extensions: 3585692879
Number of Successful Extensions: 132109653
Number of sequences better than 0.0: 0
|
