BLASTX 7.6.2
Query= UN06201 /QuerySize=1298
(1297 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297807181|ref|XP_002871474.1| hypothetical protein ARALYDRAFT... 428 2e-117
gi|7573400|emb|CAB87703.1| putative protein [Arabidopsis thaliana] 411 1e-112
gi|186522138|ref|NP_196704.2| SPOC domain / Transcription elonga... 411 1e-112
gi|297808571|ref|XP_002872169.1| hypothetical protein ARALYDRAFT... 292 9e-077
gi|42573473|ref|NP_974833.1| SPOC dand transcription elongation ... 287 4e-075
gi|225430091|ref|XP_002281873.1| PREDICTED: hypothetical protein... 155 2e-035
gi|296081928|emb|CBI20933.3| unnamed protein product [Vitis vini... 155 2e-035
gi|147841857|emb|CAN64736.1| hypothetical protein VITISV_043189 ... 154 3e-035
gi|242060932|ref|XP_002451755.1| hypothetical protein SORBIDRAFT... 150 7e-034
gi|49387896|dbj|BAD24999.1| PHD finger protein-like [Oryza sativ... 146 1e-032
gi|115444961|ref|NP_001046260.1| Os02g0208600 [Oryza sativa Japo... 146 1e-032
gi|218190291|gb|EEC72718.1| hypothetical protein OsI_06323 [Oryz... 146 1e-032
gi|222622404|gb|EEE56536.1| hypothetical protein OsJ_05842 [Oryz... 146 1e-032
gi|115468770|ref|NP_001057984.1| Os06g0595900 [Oryza sativa Japo... 126 1e-026
gi|51968872|dbj|BAD43128.1| putative transcription elongation fa... 123 9e-026
gi|79563173|ref|NP_180135.2| SPOC domain / Transcription elongat... 123 9e-026
gi|255582730|ref|XP_002532142.1| transcription elongation factor... 114 4e-023
>gi|297807181|ref|XP_002871474.1| hypothetical protein ARALYDRAFT_350338
[Arabidopsis lyrata subsp. lyrata]
Length = 819
Score = 428 bits (1098), Expect = 2e-117
Identities = 221/303 (72%), Positives = 252/303 (83%), Gaps = 21/303 (6%)
Frame = -1
Query: 1099 K*RVELG*VGLRKFIQELPKSRSRTLMVMYLACKDGISKSQRGSLFEVVDSYVADKRVGY 920
K RV L G KFIQELPKSR+R LMVMYLACKDGIS+SQRGSL EV+DSYVAD+RVGY
Sbjct: 520 KGRVRLS--GFGKFIQELPKSRTRALMVMYLACKDGISESQRGSLIEVIDSYVADQRVGY 577
Query: 919 AEPASGVELYLCPTRGETLDLLTKVISKDQLDEIKSLDSGLL-VVVWRRP-VNKPS--LK 752
AEPASGVELYLCPTRGETLDLL+KVIS++QLDE+KSLD GL+ VVVWRR V KPS +
Sbjct: 578 AEPASGVELYLCPTRGETLDLLSKVISQEQLDELKSLDIGLVGVVVWRRAVVPKPSSGSR 637
Query: 751 RQHSHAS-SGSRASVVPENKKQRGNLTEKPPVAASVGNNHHGYGGKAVEE----DDDDDA 587
RQHS +S GS+ SV+P NKKQR +++EKP V AS+ N +HGYGG+ V+ DDDDD
Sbjct: 638 RQHSSSSFLGSKTSVLPVNKKQRMHVSEKPLVVASIRNRNHGYGGEGVKHVAAGDDDDDV 697
Query: 586 PPGFGPVASRDDDDLPEFNFSSSSVVPVSSHQPLPSQPKSLDQVRQLIHMYGNSARSYNN 407
PPGFGPVASRDDDDLPEFNF SSSVVPV+S QPLP+Q KSLDQVR+LIH YG SA Y++
Sbjct: 698 PPGFGPVASRDDDDLPEFNF-SSSVVPVTSPQPLPAQSKSLDQVRKLIHKYGKSASIYDD 756
Query: 406 DNDDDDIPEWRPNVPSHQLPPPPPPPPGFRPEMGIQDQSRTMVRPPQDGWWDNQNGGSGQ 227
D+D+DDIPEW+P+VPSHQLPPPPPPPPGFRPE + RPPQDGWWDNQNGGSGQ
Sbjct: 757 DDDEDDIPEWQPHVPSHQLPPPPPPPPGFRPE---------VFRPPQDGWWDNQNGGSGQ 807
Query: 226 HYD 218
HY+
Sbjct: 808 HYE 810
Score = 122 bits (306), Expect = 1e-025
Identities = 58/76 (76%), Positives = 69/76 (90%)
Frame = -3
Query: 1295 SPKSDVSVKVDDDVSGLEKTPSIADIKGEKIWHGLLQLSMSSVVPVTGIFRSGEKADTSE 1116
SPK D +VKVDDDV+ LEKT +++D KGE+ W G+LQL+MSSVVPVTGIF+SGEKA+TSE
Sbjct: 453 SPKVDANVKVDDDVARLEKTSALSDDKGERAWDGILQLNMSSVVPVTGIFKSGEKAETSE 512
Query: 1115 WPAMLEVKGRVRLSGF 1068
WPAM+EVKGRVRLSGF
Sbjct: 513 WPAMVEVKGRVRLSGF 528
>gi|7573400|emb|CAB87703.1| putative protein [Arabidopsis thaliana]
Length = 871
Score = 411 bits (1056), Expect = 1e-112
Identities = 218/303 (71%), Positives = 249/303 (82%), Gaps = 23/303 (7%)
Frame = -1
Query: 1099 K*RVELG*VGLRKFIQELPKSRSRTLMVMYLACKDGISKSQRGSLFEVVDSYVADKRVGY 920
K RV L G KFIQELPKSR+R LMVMYLA KDGIS+SQRGSL EV+DSYVAD+RVGY
Sbjct: 578 KGRVRLS--GFGKFIQELPKSRTRALMVMYLAYKDGISESQRGSLIEVIDSYVADQRVGY 635
Query: 919 AEPASGVELYLCPTRGETLDLLTKVISKDQLDEIKSLDSGLL-VVVWRRP-VNKP--SLK 752
AEPASGVELYLCPTRGETLDLL KVIS++QLDE+KSLD GL+ VVVWRR V KP K
Sbjct: 636 AEPASGVELYLCPTRGETLDLLNKVISQEQLDEVKSLDIGLVGVVVWRRAVVPKPGSGSK 695
Query: 751 RQHSHASS-GSRASVVPENKKQRGNLTEKPPVAASVGNNHHGYGGKAVEEDD--DDDAPP 581
RQHS +SS GS+ SV+P NKKQR ++TEKP V AS+ N+HHGY V+ D DDD PP
Sbjct: 696 RQHSFSSSIGSKTSVLPVNKKQRVHVTEKPLVVASMRNHHHGY----VKHDTAADDDVPP 751
Query: 580 GFGPVASRDDDDLPEFNFSSSSVVPVSSHQPLPSQPKSLDQVRQLIHMYGNSARSYNNDN 401
GFGPVASRD+DDLPEFNF +SSVVPVSS QPLP+Q KSLDQVR+LIH YG SA +Y++D+
Sbjct: 752 GFGPVASRDEDDLPEFNF-NSSVVPVSSPQPLPAQSKSLDQVRKLIHKYGKSASTYDDDD 810
Query: 400 DDDDIPEWRPNVPSHQLPPPPPPPPGFRPEMGIQDQSRTMVRPPQDGWWDNQNGGSGQHY 221
D+DDIPEW+P+VPSHQLPPPPPPP GFRPE + RPPQDGW+DNQNGGSGQHY
Sbjct: 811 DEDDIPEWQPHVPSHQLPPPPPPPLGFRPE---------VFRPPQDGWYDNQNGGSGQHY 861
Query: 220 DQN 212
++N
Sbjct: 862 ERN 864
Score = 117 bits (291), Expect = 6e-024
Identities = 54/76 (71%), Positives = 67/76 (88%)
Frame = -3
Query: 1295 SPKSDVSVKVDDDVSGLEKTPSIADIKGEKIWHGLLQLSMSSVVPVTGIFRSGEKADTSE 1116
+P+ D +VKVDDD+S +EK +++D KGE+ W G+LQLSMSSVVPV GIF+SGEKA+TSE
Sbjct: 511 TPEFDANVKVDDDISRVEKAAALSDDKGERAWDGILQLSMSSVVPVAGIFKSGEKAETSE 570
Query: 1115 WPAMLEVKGRVRLSGF 1068
WPAM+EVKGRVRLSGF
Sbjct: 571 WPAMVEVKGRVRLSGF 586
>gi|186522138|ref|NP_196704.2| SPOC domain / Transcription elongation factor
S-II protein [Arabidopsis thaliana]
Length = 873
Score = 411 bits (1056), Expect = 1e-112
Identities = 218/303 (71%), Positives = 249/303 (82%), Gaps = 23/303 (7%)
Frame = -1
Query: 1099 K*RVELG*VGLRKFIQELPKSRSRTLMVMYLACKDGISKSQRGSLFEVVDSYVADKRVGY 920
K RV L G KFIQELPKSR+R LMVMYLA KDGIS+SQRGSL EV+DSYVAD+RVGY
Sbjct: 580 KGRVRLS--GFGKFIQELPKSRTRALMVMYLAYKDGISESQRGSLIEVIDSYVADQRVGY 637
Query: 919 AEPASGVELYLCPTRGETLDLLTKVISKDQLDEIKSLDSGLL-VVVWRRP-VNKP--SLK 752
AEPASGVELYLCPTRGETLDLL KVIS++QLDE+KSLD GL+ VVVWRR V KP K
Sbjct: 638 AEPASGVELYLCPTRGETLDLLNKVISQEQLDEVKSLDIGLVGVVVWRRAVVPKPGSGSK 697
Query: 751 RQHSHASS-GSRASVVPENKKQRGNLTEKPPVAASVGNNHHGYGGKAVEEDD--DDDAPP 581
RQHS +SS GS+ SV+P NKKQR ++TEKP V AS+ N+HHGY V+ D DDD PP
Sbjct: 698 RQHSFSSSIGSKTSVLPVNKKQRVHVTEKPLVVASMRNHHHGY----VKHDTAADDDVPP 753
Query: 580 GFGPVASRDDDDLPEFNFSSSSVVPVSSHQPLPSQPKSLDQVRQLIHMYGNSARSYNNDN 401
GFGPVASRD+DDLPEFNF +SSVVPVSS QPLP+Q KSLDQVR+LIH YG SA +Y++D+
Sbjct: 754 GFGPVASRDEDDLPEFNF-NSSVVPVSSPQPLPAQSKSLDQVRKLIHKYGKSASTYDDDD 812
Query: 400 DDDDIPEWRPNVPSHQLPPPPPPPPGFRPEMGIQDQSRTMVRPPQDGWWDNQNGGSGQHY 221
D+DDIPEW+P+VPSHQLPPPPPPP GFRPE + RPPQDGW+DNQNGGSGQHY
Sbjct: 813 DEDDIPEWQPHVPSHQLPPPPPPPLGFRPE---------VFRPPQDGWYDNQNGGSGQHY 863
Query: 220 DQN 212
++N
Sbjct: 864 ERN 866
Score = 117 bits (291), Expect = 6e-024
Identities = 54/76 (71%), Positives = 67/76 (88%)
Frame = -3
Query: 1295 SPKSDVSVKVDDDVSGLEKTPSIADIKGEKIWHGLLQLSMSSVVPVTGIFRSGEKADTSE 1116
+P+ D +VKVDDD+S +EK +++D KGE+ W G+LQLSMSSVVPV GIF+SGEKA+TSE
Sbjct: 513 TPEFDANVKVDDDISRVEKAAALSDDKGERAWDGILQLSMSSVVPVAGIFKSGEKAETSE 572
Query: 1115 WPAMLEVKGRVRLSGF 1068
WPAM+EVKGRVRLSGF
Sbjct: 573 WPAMVEVKGRVRLSGF 588
>gi|297808571|ref|XP_002872169.1| hypothetical protein ARALYDRAFT_489410
[Arabidopsis lyrata subsp. lyrata]
Length = 1027
Score = 292 bits (747), Expect = 9e-077
Identities = 172/295 (58%), Positives = 203/295 (68%), Gaps = 31/295 (10%)
Frame = -1
Query: 1099 K*RVELG*VGLRKFIQELPKSRSRTLMVMYLACKDGISKSQRGSLFEVVDSYVADKRVGY 920
K RV L G KF++ELP SRSR LMVM + CKDGIS+SQR SLFEV SYVAD+RVGY
Sbjct: 713 KGRVRLSAFG--KFVKELPLSRSRVLMVMNVVCKDGISQSQRDSLFEVTKSYVADQRVGY 770
Query: 919 AEPASGVELYLCPTRGETLDLLTKVISKDQLDEIK-SLDSGLL-VVVWRRPV-------N 767
AEP SGVELYLCP RGE L+LL+K+ISKD DE+K S D GL+ VVVWRR V +
Sbjct: 771 AEPTSGVELYLCPPRGEILELLSKIISKDHFDEVKCSEDIGLIGVVVWRRAVVASPGSRH 830
Query: 766 KPSLKRQHSHASSGSRASVV-PENKKQR-GNLTEKPPVAASVGNNHHGYGGKAVEEDDDD 593
KP KRQHS SSG++ SV+ PENK+ N+T PPV +HG G +DDD+
Sbjct: 831 KPGFKRQHS--SSGAKKSVLAPENKRSSCVNVTNPPPVVNVASMRNHGLVGC---DDDDE 885
Query: 592 DAPPGFGPVASRDDDDLPEFNFSSSSVVPVSSHQPLPSQPKSLDQVRQLIHMYGNSARS- 416
D PPGFGPVA++DDDDLPEFNFSSSS PV+S P Q +S+DQVR+LI YGNSA S
Sbjct: 886 DVPPGFGPVAAKDDDDLPEFNFSSSS-GPVTSFPQPPPQSRSMDQVRELILKYGNSAGSG 944
Query: 415 ------YNNDNDDDDIPEWRPNVPSHQLPPPPPPPPGFRPEMGIQDQSRTMVRPP 269
+ D+DDDDIPEW+P V HQ+ PPPP P++ Q SRTM RPP
Sbjct: 945 SKRPWDGHEDDDDDDIPEWQPQVTGHQVQLPPPP-----PDLSPQFHSRTMARPP 994
>gi|42573473|ref|NP_974833.1| SPOC dand transcription elongation factor S-II
domain protein [Arabidopsis thaliana]
Length = 997
Score = 287 bits (733), Expect = 4e-075
Identities = 174/320 (54%), Positives = 208/320 (65%), Gaps = 31/320 (9%)
Frame = -1
Query: 1099 K*RVELG*VGLRKFIQELPKSRSRTLMVMYLACKDGISKSQRGSLFEVVDSYVADKRVGY 920
K RV L G KF++ELP SRSR LMVM + CK+GIS+SQR SL EV SYVAD+RVGY
Sbjct: 692 KGRVRLSAFG--KFVKELPLSRSRVLMVMNVVCKNGISQSQRDSLIEVAKSYVADQRVGY 749
Query: 919 AEPASGVELYLCPTRGETLDLLTKVISKDQLDEIK-SLDSGLL-VVVWRRPV-------N 767
AEP SGVELYLCPT GETLDLL+K+ISKD LDE+K S D GL+ VVVWRR V +
Sbjct: 750 AEPTSGVELYLCPTLGETLDLLSKIISKDYLDEVKCSEDIGLIGVVVWRRAVVASPGSRH 809
Query: 766 KPSLKRQHSHASSGSRASVV-PENKKQRGNLTEKPPVAASVGNNHHGYGGKAVEEDDDDD 590
KP KRQHS S+G++ SV+ PEN+K R P V +HG G +DDD+D
Sbjct: 810 KPGFKRQHS--STGTKRSVLAPENQKSRSVSVTNPSVVNVESMRNHGLVGC---DDDDED 864
Query: 589 APPGFGPVASRDDDDLPEFNFSSSSVVPVSSHQPLPSQPKSLDQVRQLIHMYGNSARS-- 416
PPGFGPVA++DDDDLPEFNF+SSS SS +P P Q +SLDQVR+LI YGNS S
Sbjct: 865 MPPGFGPVAAKDDDDLPEFNFNSSSGPVTSSPRP-PLQSRSLDQVRELILKYGNSTGSGS 923
Query: 415 -----YNNDNDDDDIPEWRPNVPSHQLPPPPPPPPGFRPEMGIQDQSRTMVRPPQDGWWD 251
++D+DDDDIPEW+P +P PPPP P F + ++ V P GW
Sbjct: 924 KRPWDGHDDDDDDDIPEWQPQLP----PPPPDLSPQFHSGTMARPPAQRPVAGPPSGWKA 979
Query: 250 NQNGGSGQHYDQNRSRNRGF 191
NQN Q Y + RNRGF
Sbjct: 980 NQNAPRQQQY--SARRNRGF 997
>gi|225430091|ref|XP_002281873.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 1146
Score = 155 bits (390), Expect = 2e-035
Identities = 90/200 (45%), Positives = 115/200 (57%), Gaps = 16/200 (8%)
Frame = -1
Query: 1063 KFIQELPKSRSRTLMVMYLACKDGISKSQRGSLFEVVDSYVADKRVGYAEPASGVELYLC 884
KF+QELP SRSR MV+ A K+G S+ R +L EV DSYV D+RVG+AEPA G+ELY C
Sbjct: 758 KFLQELPMSRSRATMVVRFAWKEGSSEDGRANLCEVADSYVLDERVGFAEPAPGMELYFC 817
Query: 883 PTRGETLDLLTKVISKDQLDEIKSLDSGLL-VVVWRR----PVNKPSLKRQHSHASSGSR 719
P TL++++K + KDQ + + S D+GL+ VVVWR+ P+ H H +
Sbjct: 818 PPHTRTLEMISKHLYKDQTETLNSTDNGLIGVVVWRKAQLTSTISPNSSSLHKHGTKKQH 877
Query: 718 ASVVPENKK---QRGNLTEKPPVAASVGNNHHGYGGKAVEEDDDDDAPPGFGPVASRDDD 548
S ++K N T KP N DDDDD PPGFGP ASRD+D
Sbjct: 878 FSTRRHHEKDANMNSNFTSKPSHPLGSAPNI-----PEPSTDDDDDIPPGFGPAASRDED 932
Query: 547 DLPEFNF---SSSSVVPVSS 497
DLPEF F S+SS P S+
Sbjct: 933 DLPEFQFSGGSNSSTAPFSA 952
>gi|296081928|emb|CBI20933.3| unnamed protein product [Vitis vinifera]
Length = 1097
Score = 155 bits (390), Expect = 2e-035
Identities = 90/200 (45%), Positives = 115/200 (57%), Gaps = 16/200 (8%)
Frame = -1
Query: 1063 KFIQELPKSRSRTLMVMYLACKDGISKSQRGSLFEVVDSYVADKRVGYAEPASGVELYLC 884
KF+QELP SRSR MV+ A K+G S+ R +L EV DSYV D+RVG+AEPA G+ELY C
Sbjct: 722 KFLQELPMSRSRATMVVRFAWKEGSSEDGRANLCEVADSYVLDERVGFAEPAPGMELYFC 781
Query: 883 PTRGETLDLLTKVISKDQLDEIKSLDSGLL-VVVWRR----PVNKPSLKRQHSHASSGSR 719
P TL++++K + KDQ + + S D+GL+ VVVWR+ P+ H H +
Sbjct: 782 PPHTRTLEMISKHLYKDQTETLNSTDNGLIGVVVWRKAQLTSTISPNSSSLHKHGTKKQH 841
Query: 718 ASVVPENKK---QRGNLTEKPPVAASVGNNHHGYGGKAVEEDDDDDAPPGFGPVASRDDD 548
S ++K N T KP N DDDDD PPGFGP ASRD+D
Sbjct: 842 FSTRRHHEKDANMNSNFTSKPSHPLGSAPNI-----PEPSTDDDDDIPPGFGPAASRDED 896
Query: 547 DLPEFNF---SSSSVVPVSS 497
DLPEF F S+SS P S+
Sbjct: 897 DLPEFQFSGGSNSSTAPFSA 916
>gi|147841857|emb|CAN64736.1| hypothetical protein VITISV_043189 [Vitis
vinifera]
Length = 1059
Score = 154 bits (389), Expect = 3e-035
Identities = 90/200 (45%), Positives = 115/200 (57%), Gaps = 16/200 (8%)
Frame = -1
Query: 1063 KFIQELPKSRSRTLMVMYLACKDGISKSQRGSLFEVVDSYVADKRVGYAEPASGVELYLC 884
KF+QELP SRSR MV+ A K+G S+ R +L EV DSYV D+RVG+AEPA G+ELY C
Sbjct: 671 KFLQELPMSRSRATMVVRFAWKEGSSEDGRANLCEVADSYVLDERVGFAEPAPGMELYFC 730
Query: 883 PTRGETLDLLTKVISKDQLDEIKSLDSGLL-VVVWRR----PVNKPSLKRQHSHASSGSR 719
P TL++++K + KDQ + + S D+GL+ VVVWR+ P+ H H +
Sbjct: 731 PPHTXTLEMISKHLYKDQTETLNSTDNGLIGVVVWRKAQLTSTISPNSSSLHKHGTKKQH 790
Query: 718 ASVVPENKK---QRGNLTEKPPVAASVGNNHHGYGGKAVEEDDDDDAPPGFGPVASRDDD 548
S ++K N T KP N DDDDD PPGFGP ASRD+D
Sbjct: 791 FSTRRHHEKDANMNSNFTSKPSHPLGSAPNI-----PEPSTDDDDDIPPGFGPAASRDED 845
Query: 547 DLPEFNF---SSSSVVPVSS 497
DLPEF F S+SS P S+
Sbjct: 846 DLPEFQFSGGSNSSTAPFSA 865
>gi|242060932|ref|XP_002451755.1| hypothetical protein SORBIDRAFT_04g007300
[Sorghum bicolor]
Length = 1087
Score = 150 bits (377), Expect = 7e-034
Identities = 82/200 (41%), Positives = 122/200 (61%), Gaps = 8/200 (4%)
Frame = -1
Query: 1099 K*RVELG*VGLRKFIQELPKSRSRTLMVMYLACKDGISKSQRGSLFEVVDSYVADKRVGY 920
K RV+L + F+++LPKSRSR +M+ L K+G S+S R + + +D+Y++D+RVG
Sbjct: 711 KGRVKLS--AFQDFVEQLPKSRSRAIMITELCWKEGSSESGRQHILQTIDAYISDERVGL 768
Query: 919 AEPASGVELYLCPTRGETLDLLTKVISKDQLDEIKSLDSGLL-VVVWRRPVNKPSLKRQH 743
AEPA G+ELYLCP+ G+T+++L++ + K+ + + +S + VVVWRRP N P + H
Sbjct: 769 AEPAEGIELYLCPSHGKTVEILSRYLPKEHQESLAVAESSFIGVVVWRRP-NIPRVPTSH 827
Query: 742 S--HASSGSRASVVPENKKQRGNLTEKPPVAASVGNNHHGYGG--KAVEEDDDDDAPPGF 575
H GS+ K Q N +P + + G+ + EED DD PPGF
Sbjct: 828 GSHHRHDGSKRQQSILGKPQVMNPAARPSLPLNSYGAPPGFPNQRRRAEEDVTDDVPPGF 887
Query: 574 GPVASRDDDDLPEFNFSSSS 515
GP +RD+DDLPEFNF +SS
Sbjct: 888 GPGVARDEDDLPEFNFVNSS 907
>gi|49387896|dbj|BAD24999.1| PHD finger protein-like [Oryza sativa Japonica
Group]
Length = 1119
Score = 146 bits (367), Expect = 1e-032
Identities = 82/198 (41%), Positives = 124/198 (62%), Gaps = 7/198 (3%)
Frame = -1
Query: 1099 K*RVELG*VGLRKFIQELPKSRSRTLMVMYLACKDGISKSQRGSLFEVVDSYVADKRVGY 920
K RV+L ++F+++LPKSRSR +MV L K+G +S R L + +DSY++D+RVG
Sbjct: 720 KGRVKLS--AFQEFVEQLPKSRSRAIMVTELCWKEGSHESGRQHLLQTIDSYISDERVGL 777
Query: 919 AEPASGVELYLCPTRGETLDLLTKVISKDQLDEIKSLDSGLL-VVVWRRPVNKPSLKRQH 743
AEPA G+ELYLCP++G+T+++L++ + K+ L+ + S ++ V+VWRRP N P +
Sbjct: 778 AEPADGIELYLCPSQGKTVEILSRHLPKEHLESLAVSASSIIGVIVWRRP-NVPRMPAHP 836
Query: 742 SHASSGSRASVVPENKKQRGNLTEKPPVAASVGNNHHGYGGK--AVEEDDDDDAPPGFGP 569
H S R S++ + + +P + S G+ + EED DD PPGFGP
Sbjct: 837 RHDGS-RRPSILKKPQVTGSTPGPRPSLPMSSHGAPPGFPVQRHRHEEDVTDDVPPGFGP 895
Query: 568 VASRDDDDLPEFNFSSSS 515
+RD+DDLPEFNF +SS
Sbjct: 896 GVARDEDDLPEFNFVNSS 913
>gi|115444961|ref|NP_001046260.1| Os02g0208600 [Oryza sativa Japonica Group]
Length = 913
Score = 146 bits (367), Expect = 1e-032
Identities = 82/198 (41%), Positives = 124/198 (62%), Gaps = 7/198 (3%)
Frame = -1
Query: 1099 K*RVELG*VGLRKFIQELPKSRSRTLMVMYLACKDGISKSQRGSLFEVVDSYVADKRVGY 920
K RV+L ++F+++LPKSRSR +MV L K+G +S R L + +DSY++D+RVG
Sbjct: 720 KGRVKLS--AFQEFVEQLPKSRSRAIMVTELCWKEGSHESGRQHLLQTIDSYISDERVGL 777
Query: 919 AEPASGVELYLCPTRGETLDLLTKVISKDQLDEIKSLDSGLL-VVVWRRPVNKPSLKRQH 743
AEPA G+ELYLCP++G+T+++L++ + K+ L+ + S ++ V+VWRRP N P +
Sbjct: 778 AEPADGIELYLCPSQGKTVEILSRHLPKEHLESLAVSASSIIGVIVWRRP-NVPRMPAHP 836
Query: 742 SHASSGSRASVVPENKKQRGNLTEKPPVAASVGNNHHGYGGK--AVEEDDDDDAPPGFGP 569
H S R S++ + + +P + S G+ + EED DD PPGFGP
Sbjct: 837 RHDGS-RRPSILKKPQVTGSTPGPRPSLPMSSHGAPPGFPVQRHRHEEDVTDDVPPGFGP 895
Query: 568 VASRDDDDLPEFNFSSSS 515
+RD+DDLPEFNF +SS
Sbjct: 896 GVARDEDDLPEFNFVNSS 913
>gi|218190291|gb|EEC72718.1| hypothetical protein OsI_06323 [Oryza sativa Indica
Group]
Length = 907
Score = 146 bits (367), Expect = 1e-032
Identities = 82/198 (41%), Positives = 124/198 (62%), Gaps = 7/198 (3%)
Frame = -1
Query: 1099 K*RVELG*VGLRKFIQELPKSRSRTLMVMYLACKDGISKSQRGSLFEVVDSYVADKRVGY 920
K RV+L ++F+++LPKSRSR +MV L K+G +S R L + +DSY++D+RVG
Sbjct: 395 KGRVKLS--AFQEFVEQLPKSRSRAIMVTELCWKEGSHESGRQHLLQTIDSYISDERVGL 452
Query: 919 AEPASGVELYLCPTRGETLDLLTKVISKDQLDEIKSLDSGLL-VVVWRRPVNKPSLKRQH 743
AEPA G+ELYLCP++G+T+++L++ + K+ L+ + S ++ V+VWRRP N P +
Sbjct: 453 AEPADGIELYLCPSQGKTVEILSRHLPKEHLESLAVSASSIIGVIVWRRP-NVPRMPAHP 511
Query: 742 SHASSGSRASVVPENKKQRGNLTEKPPVAASVGNNHHGYGGK--AVEEDDDDDAPPGFGP 569
H S R S++ + + +P + S G+ + EED DD PPGFGP
Sbjct: 512 RHDGS-RRPSILKKPQVTGSTPGPRPSLPMSSHGAPPGFPVQRHRHEEDVTDDVPPGFGP 570
Query: 568 VASRDDDDLPEFNFSSSS 515
+RD+DDLPEFNF +SS
Sbjct: 571 GVARDEDDLPEFNFVNSS 588
>gi|222622404|gb|EEE56536.1| hypothetical protein OsJ_05842 [Oryza sativa
Japonica Group]
Length = 614
Score = 146 bits (367), Expect = 1e-032
Identities = 82/198 (41%), Positives = 124/198 (62%), Gaps = 7/198 (3%)
Frame = -1
Query: 1099 K*RVELG*VGLRKFIQELPKSRSRTLMVMYLACKDGISKSQRGSLFEVVDSYVADKRVGY 920
K RV+L ++F+++LPKSRSR +MV L K+G +S R L + +DSY++D+RVG
Sbjct: 395 KGRVKLS--AFQEFVEQLPKSRSRAIMVTELCWKEGSHESGRQHLLQTIDSYISDERVGL 452
Query: 919 AEPASGVELYLCPTRGETLDLLTKVISKDQLDEIKSLDSGLL-VVVWRRPVNKPSLKRQH 743
AEPA G+ELYLCP++G+T+++L++ + K+ L+ + S ++ V+VWRRP N P +
Sbjct: 453 AEPADGIELYLCPSQGKTVEILSRHLPKEHLESLAVSASSIIGVIVWRRP-NVPRMPAHP 511
Query: 742 SHASSGSRASVVPENKKQRGNLTEKPPVAASVGNNHHGYGGK--AVEEDDDDDAPPGFGP 569
H S R S++ + + +P + S G+ + EED DD PPGFGP
Sbjct: 512 RHDGS-RRPSILKKPQVTGSTPGPRPSLPMSSHGAPPGFPVQRHRHEEDVTDDVPPGFGP 570
Query: 568 VASRDDDDLPEFNFSSSS 515
+RD+DDLPEFNF +SS
Sbjct: 571 GVARDEDDLPEFNFVNSS 588
>gi|115468770|ref|NP_001057984.1| Os06g0595900 [Oryza sativa Japonica Group]
Length = 630
Score = 126 bits (314), Expect = 1e-026
Identities = 74/188 (39%), Positives = 108/188 (57%), Gaps = 13/188 (6%)
Frame = -1
Query: 1099 K*RVELG*VGLRKFIQELPKSRSRTLMVMYLACKDGISKSQRGSLFEVVDSYVADKRVGY 920
K RV L ++F+++LPKSRSR +MV L K+G +S R L +DSY+AD+RVG
Sbjct: 447 KGRVRLS--AFQEFLEQLPKSRSRAIMVTELRWKEGSLESGRQHLLRTIDSYIADERVGL 504
Query: 919 AEPASGVELYLCPTRGETLDLLTKVISKDQLDEIK-SLDSGLLVVVWRRPVNKPSLKRQH 743
+PA GVELYLCP++G+ +L + + K+Q + + S + VVVWRRP P + +
Sbjct: 505 VKPADGVELYLCPSQGKAAQILAEHLPKEQSSSLTVTGTSAIGVVVWRRPHVSPRIPAR- 563
Query: 742 SHASSGSRASVVPENKKQRGNLTEKPPVAASVGNNHHGYGGKAVEEDDDDDAPPGFGPVA 563
+ GSR + ++KQ + P+++ N +G V DD PPGFGP
Sbjct: 564 ---NDGSRNQSI--SRKQHAVIASAVPLSSKPTNERQHHGQDVV----TDDVPPGFGPGV 614
Query: 562 SRDDDDLP 539
R+DDDLP
Sbjct: 615 VREDDDLP 622
>gi|51968872|dbj|BAD43128.1| putative transcription elongation factor S-II
[Arabidopsis thaliana]
Length = 745
Score = 123 bits (307), Expect = 9e-026
Identities = 60/98 (61%), Positives = 79/98 (80%), Gaps = 2/98 (2%)
Frame = -1
Query: 1063 KFIQELPKSRSRTLMVMYLACKDGISKSQRGSLFEVVDSYVADKRVGYAEPASGVELYLC 884
KF++ELP SRSR +MVM CK+ SK+++ ++ EVVDSY D RVGYAEPASGVELYLC
Sbjct: 645 KFVRELPNSRSRAVMVMCFVCKEECSKAEQENISEVVDSYAKDGRVGYAEPASGVELYLC 704
Query: 883 PTRGETLDLLTKVISKDQLDEIKSL-DSGLL-VVVWRR 776
PTRG T+++L K++ ++QLD +KS+ D GL+ VVVWRR
Sbjct: 705 PTRGRTVEILNKIVPRNQLDFLKSINDDGLIGVVVWRR 742
>gi|79563173|ref|NP_180135.2| SPOC domain / Transcription elongation factor S-II
protein [Arabidopsis thaliana]
Length = 745
Score = 123 bits (307), Expect = 9e-026
Identities = 60/98 (61%), Positives = 79/98 (80%), Gaps = 2/98 (2%)
Frame = -1
Query: 1063 KFIQELPKSRSRTLMVMYLACKDGISKSQRGSLFEVVDSYVADKRVGYAEPASGVELYLC 884
KF++ELP SRSR +MVM CK+ SK+++ ++ EVVDSY D RVGYAEPASGVELYLC
Sbjct: 645 KFVRELPNSRSRAVMVMCFVCKEECSKTEQENISEVVDSYAKDGRVGYAEPASGVELYLC 704
Query: 883 PTRGETLDLLTKVISKDQLDEIKSL-DSGLL-VVVWRR 776
PTRG T+++L K++ ++QLD +KS+ D GL+ VVVWRR
Sbjct: 705 PTRGRTVEILNKIVPRNQLDFLKSINDDGLIGVVVWRR 742
>gi|255582730|ref|XP_002532142.1| transcription elongation factor s-II, putative
[Ricinus communis]
Length = 1154
Score = 114 bits (284), Expect = 4e-023
Identities = 56/116 (48%), Positives = 78/116 (67%), Gaps = 5/116 (4%)
Frame = -1
Query: 1063 KFIQELPKSRSRTLMVMYLACKDGISKSQRGSLFEVVDSYVADKRVGYAEPASGVELYLC 884
KF+QELP SRSR +M ++ K+G S+S+ + EV DSYV D RVG+ EPA GVELYLC
Sbjct: 728 KFLQELPMSRSRAVMAVHFVGKEGSSESESAGVSEVADSYVMDSRVGFGEPAPGVELYLC 787
Query: 883 PTRGETLDLLTKVISKDQLDEIKSLDSGLL-VVVWRRP----VNKPSLKRQHSHAS 731
P +T ++L KV+ KDQ+D + ++D+GL+ V+VWR+P P+ H H S
Sbjct: 788 PPHSKTREMLGKVLPKDQVDALNAIDNGLIGVIVWRKPQITSTISPNSASHHKHNS 843
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 748,178,612,197
Number of Sequences: 15229318
Number of Extensions: 748178612197
Number of Successful Extensions: 201585142
Number of sequences better than 0.0: 0
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