BLASTX 7.6.2
Query= UN06245 /QuerySize=957
(956 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G42320.1 | Symbols: | nucleolar protein gar2-... 312 2e-085
TAIR9_protein||AT2G42320.2 | Symbols: | nucleolar protein gar2-... 312 2e-085
TAIR9_protein||AT3G57780.1 | Symbols: | EXPRESSED IN: 20 plant ... 221 5e-058
TAIR9_protein||AT3G01810.1 | Symbols: | FUNCTIONS IN: molecular... 163 3e-040
TAIR9_protein||AT5G06930.1 | Symbols: | LOCATED IN: chloroplast... 159 3e-039
TAIR9_protein||AT5G43230.1 | Symbols: | unknown protein | chr5:... 129 2e-030
TAIR9_protein||AT3G01810.2 | Symbols: | FUNCTIONS IN: molecular... 115 6e-026
>TAIR9_protein||AT2G42320.1 | Symbols: | nucleolar protein gar2-related |
chr2:17628102-17630657 FORWARD
Length = 670
Score = 312 bits (799), Expect = 2e-085
Identities = 166/209 (79%), Positives = 175/209 (83%), Gaps = 6/209 (2%)
Frame = +2
Query: 158 ELWFRSTAQ--NAIGNWSRCLTEMFGMNSDDDHVVESEGSDSG---SKAFVLLNELSDLL 322
+L F S AQ NAIGNWSRCLTEMFGMNSDD E S+ SKAFVLLNELSDLL
Sbjct: 463 DLSFGSGAQLKNAIGNWSRCLTEMFGMNSDDSSAKEKRNSEDDHVESKAFVLLNELSDLL 522
Query: 323 MLPKDMLMESSIREEICPSITLSLIKRILCNFTPDEFCPDHVPGAVLEELNAVESNGSEE 502
MLPKDMLME SIREEICPSI+L LIKRILCNFTPDEFCPD VPGAVLEELNA ES G +
Sbjct: 523 MLPKDMLMEISIREEICPSISLPLIKRILCNFTPDEFCPDQVPGAVLEELNAAESIGDRK 582
Query: 503 EEEASFFPYAASSVTYKPPSTMDVAEKVAEAAGKLSRNVSMIQRKGYTSDEELEELDSPL 682
EAS FPYAASSV+Y PPSTMD+AEKVAEA+ KLSRNVSMIQRKGYTSDEELEELDSPL
Sbjct: 583 LSEAS-FPYAASSVSYMPPSTMDIAEKVAEASAKLSRNVSMIQRKGYTSDEELEELDSPL 641
Query: 683 TSIVDKTSEFNDSSTSNARYKLLRQVWA* 769
TSIVDK S+F S+TSNARYKLLRQVW *
Sbjct: 642 TSIVDKASDFTGSATSNARYKLLRQVWV* 670
Score = 122 bits (306), Expect = 3e-028
Identities = 59/64 (92%), Positives = 62/64 (96%)
Frame = +3
Query: 3 VLARMVMEKCVGRFDVAMFNAILRESEHQIPTDPVSDPILDSKVLPIPAGDLSFGSGAQL 182
VLARMVM+KC+GRFDVAMFNAILRESEHQIPTDPVSDPILDSKVLPIPAGDLSFGSGAQL
Sbjct: 413 VLARMVMDKCIGRFDVAMFNAILRESEHQIPTDPVSDPILDSKVLPIPAGDLSFGSGAQL 472
Query: 183 KTRL 194
K +
Sbjct: 473 KNAI 476
>TAIR9_protein||AT2G42320.2 | Symbols: | nucleolar protein gar2-related |
chr2:17628102-17630657 FORWARD
Length = 670
Score = 312 bits (799), Expect = 2e-085
Identities = 166/209 (79%), Positives = 175/209 (83%), Gaps = 6/209 (2%)
Frame = +2
Query: 158 ELWFRSTAQ--NAIGNWSRCLTEMFGMNSDDDHVVESEGSDSG---SKAFVLLNELSDLL 322
+L F S AQ NAIGNWSRCLTEMFGMNSDD E S+ SKAFVLLNELSDLL
Sbjct: 463 DLSFGSGAQLKNAIGNWSRCLTEMFGMNSDDSSAKEKRNSEDDHVESKAFVLLNELSDLL 522
Query: 323 MLPKDMLMESSIREEICPSITLSLIKRILCNFTPDEFCPDHVPGAVLEELNAVESNGSEE 502
MLPKDMLME SIREEICPSI+L LIKRILCNFTPDEFCPD VPGAVLEELNA ES G +
Sbjct: 523 MLPKDMLMEISIREEICPSISLPLIKRILCNFTPDEFCPDQVPGAVLEELNAAESIGDRK 582
Query: 503 EEEASFFPYAASSVTYKPPSTMDVAEKVAEAAGKLSRNVSMIQRKGYTSDEELEELDSPL 682
EAS FPYAASSV+Y PPSTMD+AEKVAEA+ KLSRNVSMIQRKGYTSDEELEELDSPL
Sbjct: 583 LSEAS-FPYAASSVSYMPPSTMDIAEKVAEASAKLSRNVSMIQRKGYTSDEELEELDSPL 641
Query: 683 TSIVDKTSEFNDSSTSNARYKLLRQVWA* 769
TSIVDK S+F S+TSNARYKLLRQVW *
Sbjct: 642 TSIVDKASDFTGSATSNARYKLLRQVWV* 670
Score = 122 bits (306), Expect = 3e-028
Identities = 59/64 (92%), Positives = 62/64 (96%)
Frame = +3
Query: 3 VLARMVMEKCVGRFDVAMFNAILRESEHQIPTDPVSDPILDSKVLPIPAGDLSFGSGAQL 182
VLARMVM+KC+GRFDVAMFNAILRESEHQIPTDPVSDPILDSKVLPIPAGDLSFGSGAQL
Sbjct: 413 VLARMVMDKCIGRFDVAMFNAILRESEHQIPTDPVSDPILDSKVLPIPAGDLSFGSGAQL 472
Query: 183 KTRL 194
K +
Sbjct: 473 KNAI 476
>TAIR9_protein||AT3G57780.1 | Symbols: | EXPRESSED IN: 20 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 3024
Blast hits to 2177 proteins in 255 species: Archae - 2; Bacteria - 181;
Metazoa - 988; Fungi - 289; Plants - 172; Viruses - 72; Other
Eukaryotes - 1320 (source: NCBI BLink). | chr3:21399766-21402326
REVERSE
Length = 671
Score = 221 bits (563), Expect = 5e-058
Identities = 121/184 (65%), Positives = 139/184 (75%), Gaps = 8/184 (4%)
Frame = +2
Query: 161 LWFRSTAQ--NAIGNWSRCLTEMFGMNSDDDHVVESEGSDSGSKAFVLLNELSDLLMLPK 334
L F S AQ NAIGNWSRCL EMF +N+ D VE K+F LLNELSDLLMLPK
Sbjct: 457 LSFGSGAQLKNAIGNWSRCLAEMFSINTRDS--VEENDPIESEKSFSLLNELSDLLMLPK 514
Query: 335 DMLMESSIREEICPSITLSLIKRILCNFTPDEFCPDHVPGAVLEELNAVESNGSEEEEEA 514
DMLM+ S REE+CPSI+L+LIKRILCNFTPDEFCPD VPGAVLEELN + SE++
Sbjct: 515 DMLMDRSTREEVCPSISLALIKRILCNFTPDEFCPDDVPGAVLEELN--NESISEQKLSG 572
Query: 515 SFFPYAASSVTYKPPSTMDVAEKVAEAAGKLSRNVSMIQRKGYTSDEELEELDSPLTSIV 694
FPYAAS V+Y PPS+ +VAE ++SRNVSMIQRKGYTSD+ELEELDSPLTSI+
Sbjct: 573 VSFPYAASPVSYTPPSSTNVAE--VGDISRMSRNVSMIQRKGYTSDDELEELDSPLTSII 630
Query: 695 DKTS 706
+ S
Sbjct: 631 ENVS 634
Score = 111 bits (275), Expect = 1e-024
Identities = 53/64 (82%), Positives = 59/64 (92%)
Frame = +3
Query: 3 VLARMVMEKCVGRFDVAMFNAILRESEHQIPTDPVSDPILDSKVLPIPAGDLSFGSGAQL 182
+LA+MVMEKC+ R DVAMFNAILRESEHQIPTDPVSDPILDSKVLPI +G+LSFGSGAQL
Sbjct: 406 ILAKMVMEKCIARIDVAMFNAILRESEHQIPTDPVSDPILDSKVLPILSGNLSFGSGAQL 465
Query: 183 KTRL 194
K +
Sbjct: 466 KNAI 469
>TAIR9_protein||AT3G01810.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is: nucleolar
protein gar2-related (TAIR:AT2G42320.2); Has 1293 Blast hits to 384
proteins in 97 species: Archae - 2; Bacteria - 96; Metazoa - 212; Fungi
- 99; Plants - 59; Viruses - 0; Other Eukaryotes - 825 (source: NCBI
BLink). | chr3:289218-292557 FORWARD
Length = 922
Score = 163 bits (410), Expect = 3e-040
Identities = 100/213 (46%), Positives = 127/213 (59%), Gaps = 20/213 (9%)
Frame = +2
Query: 167 FRSTAQ--NAIGNWSRCLTEMFGM-NSDDDHVVESEGSDSGSKAFVLLNELSDLLMLPKD 337
F S AQ N+IGNWSR LT++FG+ + DDD E+ + K F LL LSDL+MLPKD
Sbjct: 711 FGSGAQLKNSIGNWSRWLTDLFGIDDEDDDSSDENSYVEKSFKTFNLLKALSDLMMLPKD 770
Query: 338 MLMESSIREEICPSITLSLIKRILCNFTPDEFCPDHVPGAVLEELNAVESNGSEEEEEAS 517
ML+ SS+R+E+CP LIKR+L NF PDEFCPD VP AVL+ L SEEE E S
Sbjct: 771 MLLNSSVRKEVCPMFGAPLIKRVLNNFVPDEFCPDPVPDAVLKSLE------SEEEAEKS 824
Query: 518 F---FPYAASSVTYKPPSTMDVAEKVAE----AAGKLSRNVSMIQRKGYTSDEELEELDS 676
+P A S Y PPS ++ + A +LSR S I RK YTSD+EL+EL S
Sbjct: 825 IITSYPCTAPSPVYCPPSRTSISTIIGNFGQPQAPQLSRIRSSITRKAYTSDDELDELSS 884
Query: 677 PLTSIVDKTSEF----NDSSTSNARYKLLRQVW 763
PL +V + + N + RY+LLR+ W
Sbjct: 885 PLAVVVLQQAGSKKINNGDADETIRYQLLRECW 917
Score = 89 bits (220), Expect = 3e-018
Identities = 42/62 (67%), Positives = 50/62 (80%)
Frame = +3
Query: 9 ARMVMEKCVGRFDVAMFNAILRESEHQIPTDPVSDPILDSKVLPIPAGDLSFGSGAQLKT 188
AR++ME+CV R DVAMFNAILR+S+ PTDPVSDPI D +VLPIP+ SFGSGAQLK
Sbjct: 660 ARLIMEQCVARLDVAMFNAILRDSDDNFPTDPVSDPIADLRVLPIPSRTSSFGSGAQLKN 719
Query: 189 RL 194
+
Sbjct: 720 SI 721
>TAIR9_protein||AT5G06930.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
15 plant structures; EXPRESSED DURING: 7 growth stages; BEST
Arabidopsis thaliana protein match is: nucleolar protein gar2-related
(TAIR:AT2G42320.2); Has 3144 Blast hits to 1363 proteins in 247
species: Archae - 2; Bacteria - 721; Metazoa - 835; Fungi - 297; Plants
- 80; Viruses - 10; Other Eukaryotes - 1199 (source: NCBI BLink). |
chr5:2145139-2147849 FORWARD
Length = 724
Score = 159 bits (401), Expect = 3e-039
Identities = 93/195 (47%), Positives = 125/195 (64%), Gaps = 11/195 (5%)
Frame = +2
Query: 182 QNAIGNWSRCLTEMFGMNSDDDHVVESEGSDSGSKAFVLLNELSDLLMLPKDMLMESSIR 361
+N + WSR LT++FG++ + + + D K F LLNELSDLLMLPK+M ++SS R
Sbjct: 532 KNTVSYWSRLLTDIFGIDVEQ----KMQRGDETFKPFHLLNELSDLLMLPKEMFVDSSTR 587
Query: 362 EEICPSITLSLIKRILCNFTPDEFCPDHVPGAVLEELNA--VESNGSEEEEEASFFPYAA 535
+E+CPSI LSLIKRI+CNFTPDEFCP VPG VLEELNA + N S + A FP
Sbjct: 588 DEVCPSIGLSLIKRIVCNFTPDEFCPYPVPGTVLEELNAQSILENRSLSRDTARGFPRQV 647
Query: 536 SSVTYKPPSTMDVAEKVAEAAGKLSRNVSMIQRKGYTSDEELEELDSPLTSIVDKTSEFN 715
+ V+Y PPS + + VAE + KL +SM + GY+S+E++E SP V K +
Sbjct: 648 NPVSYSPPSCSHLTDIVAEFSVKL--KLSMTHKNGYSSNEKVETPRSPPYYNVIKGAVAK 705
Query: 716 DS---STSNARYKLL 751
D+ S +N RY+LL
Sbjct: 706 DNLNLSETNERYRLL 720
Score = 93 bits (229), Expect = 3e-019
Identities = 46/61 (75%), Positives = 50/61 (81%)
Frame = +3
Query: 3 VLARMVMEKCVGRFDVAMFNAILRESEHQIPTDPVSDPILDSKVLPIPAGDLSFGSGAQL 182
VL RMVME+C+ R DVAMFNAILRES H IPTD SDPI DS+VLPIPAG LSF SG +L
Sbjct: 472 VLTRMVMEQCIVRLDVAMFNAILRESAHHIPTDSASDPIADSRVLPIPAGVLSFESGVKL 531
Query: 183 K 185
K
Sbjct: 532 K 532
>TAIR9_protein||AT5G43230.1 | Symbols: | unknown protein |
chr5:17349125-17352747 FORWARD
Length = 849
Score = 129 bits (324), Expect = 2e-030
Identities = 79/212 (37%), Positives = 112/212 (52%), Gaps = 21/212 (9%)
Frame = +2
Query: 182 QNAIGNWSRCLTEMF-------GMNSDDDHVVESEGSDSGSKAFVLLNELSDLLMLPKDM 340
+NAIG WSR L + F G N D+D+ + + + F LLN L DL+MLP M
Sbjct: 634 KNAIGTWSRWLEDQFEQKEDKSGRNKDEDNNDKEKPECEHFRLFHLLNSLGDLMMLPFKM 693
Query: 341 LMESSIREEICPSITLSLIKRILCNFTPDEFCPDHVPGAVLEELNAVESNGSEEEEEA-- 514
L + S R+E+CP++ +IKR+L NF PDEF P +P + + LN S G EE+
Sbjct: 694 LADKSTRKEVCPTLGPPIIKRVLRNFVPDEFNPHRIPRRLFDVLN---SEGLTEEDNGCI 750
Query: 515 SFFPYAASSVTYKPPSTMDVAEKVAEAAG-KLSRNVSMIQRKGYTSDEELEELDSPLTSI 691
+ FP AAS Y PST + + E +S S + +K YTSD+EL++LD+ + SI
Sbjct: 751 TVFPSAASPTVYLMPSTDSIKRFIGELNNPSISETGSSVFKKQYTSDDELDDLDTSINSI 810
Query: 692 VDKTSEFNDSS--------TSNARYKLLRQVW 763
N S RY+LLR++W
Sbjct: 811 FSAPGTTNSSEWMPKGYGRRKTVRYQLLREIW 842
Score = 90 bits (222), Expect = 2e-018
Identities = 44/66 (66%), Positives = 53/66 (80%)
Frame = +3
Query: 3 VLARMVMEKCVGRFDVAMFNAILRESEHQIPTDPVSDPILDSKVLPIPAGDLSFGSGAQL 182
+LA++VME+ + R DVAMFNAILRES ++PTDPVSDPI D VLPIPAG SFG+GAQL
Sbjct: 574 MLAKLVMEQLISRLDVAMFNAILRESAGEMPTDPVSDPISDINVLPIPAGKASFGAGAQL 633
Query: 183 KTRLVT 200
K + T
Sbjct: 634 KNAIGT 639
>TAIR9_protein||AT3G01810.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is: nucleolar
protein gar2-related (TAIR:AT2G42320.2); Has 1224 Blast hits to 385
proteins in 102 species: Archae - 2; Bacteria - 107; Metazoa - 205;
Fungi - 107; Plants - 62; Viruses - 0; Other Eukaryotes - 741 (source:
NCBI BLink). | chr3:289218-292375 FORWARD
Length = 860
Score = 115 bits (286), Expect = 6e-026
Identities = 60/107 (56%), Positives = 75/107 (70%), Gaps = 3/107 (2%)
Frame = +2
Query: 167 FRSTAQ--NAIGNWSRCLTEMFGM-NSDDDHVVESEGSDSGSKAFVLLNELSDLLMLPKD 337
F S AQ N+IGNWSR LT++FG+ + DDD E+ + K F LL LSDL+MLPKD
Sbjct: 711 FGSGAQLKNSIGNWSRWLTDLFGIDDEDDDSSDENSYVEKSFKTFNLLKALSDLMMLPKD 770
Query: 338 MLMESSIREEICPSITLSLIKRILCNFTPDEFCPDHVPGAVLEELNA 478
ML+ SS+R+E+CP LIKR+L NF PDEFCPD VP AVL+ L +
Sbjct: 771 MLLNSSVRKEVCPMFGAPLIKRVLNNFVPDEFCPDPVPDAVLKSLES 817
Score = 89 bits (220), Expect = 3e-018
Identities = 42/62 (67%), Positives = 50/62 (80%)
Frame = +3
Query: 9 ARMVMEKCVGRFDVAMFNAILRESEHQIPTDPVSDPILDSKVLPIPAGDLSFGSGAQLKT 188
AR++ME+CV R DVAMFNAILR+S+ PTDPVSDPI D +VLPIP+ SFGSGAQLK
Sbjct: 660 ARLIMEQCVARLDVAMFNAILRDSDDNFPTDPVSDPIADLRVLPIPSRTSSFGSGAQLKN 719
Query: 189 RL 194
+
Sbjct: 720 SI 721
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,771,274,353
Number of Sequences: 33410
Number of Extensions: 3771274353
Number of Successful Extensions: 142476387
Number of sequences better than 0.0: 0
|
