BLASTX 7.6.2
Query= UN06288 /QuerySize=1060
(1059 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|145358319|ref|NP_197657.3| histone deacetylase HDT2 [Arabidop... 254 2e-065
gi|224104989|ref|XP_002313645.1| histone deacetylase [Populus tr... 202 9e-050
gi|118482036|gb|ABK92949.1| unknown [Populus trichocarpa] 201 1e-049
gi|269969916|gb|ACZ54947.1| type 2 histone deacetylase c [Nicoti... 186 5e-045
gi|297815600|ref|XP_002875683.1| hypothetical protein ARALYDRAFT... 173 4e-041
gi|18407844|ref|NP_566872.1| histone deacetylase HDT1 [Arabidops... 170 5e-040
gi|73919938|sp|Q6V9I6.1|HDT1_SOLCH RecName: Full=Histone deacety... 170 5e-040
gi|2392769|gb|AAB70032.1| putative histone deacetylase [Arabidop... 170 5e-040
gi|255638252|gb|ACU19439.1| unknown [Glycine max] 164 2e-038
gi|30688577|ref|NP_851056.1| histone deacetylase HDT2 [Arabidops... 164 3e-038
gi|334185733|ref|NP_001190012.1| histone deacetylase HDT1 [Arabi... 161 2e-037
gi|297808263|ref|XP_002872015.1| predicted protein [Arabidopsis ... 159 7e-037
gi|255573038|ref|XP_002527449.1| Histone deacetylase 2a, putativ... 159 1e-036
gi|73919943|sp|Q9M4U4.1|HDT3_MAIZE RecName: Full=Histone deacety... 156 7e-036
gi|162459285|ref|NP_001105402.1| histone deacetylase HDT1 [Zea m... 155 2e-035
gi|195606718|gb|ACG25189.1| histone deacetylase 2b [Zea mays] 154 2e-035
gi|195639676|gb|ACG39306.1| histone deacetylase 2b [Zea mays] 153 6e-035
gi|162463122|ref|NP_001105631.1| histone deacetylase HDT2 [Zea m... 149 1e-033
gi|81074563|gb|ABB55369.1| histone deacetylase 2a-like [Solanum ... 149 1e-033
gi|194694834|gb|ACF81501.1| unknown [Zea mays] 149 1e-033
>gi|145358319|ref|NP_197657.3| histone deacetylase HDT2 [Arabidopsis thaliana]
Length = 305
Score = 254 bits (648), Expect = 2e-065
Identities = 155/293 (52%), Positives = 189/293 (64%), Gaps = 33/293 (11%)
Frame = +2
Query: 95 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLD-KGKKGETALLYVTVDGKKLVMGTLSQG 271
MEFWGV V + KV P+ ++L+H+SQASLD K GE+ +L VTV G KLV+GTLSQ
Sbjct: 1 MEFWGVAVTPKNATKVTPEEDSLVHISQASLDCTVKSGESVVLSVTVGGAKLVIGTLSQD 60
Query: 272 NIPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNTSEEEDFSDSEEEEEAAAVPA---- 439
PQISFDLVF+KEFELSHS +VHF+GYKSPN E++DF+ S++E+ AVPA
Sbjct: 61 KFPQISFDLVFDKEFELSHSGTKANVHFIGYKSPNI-EQDDFTSSDDEDVPEAVPAPAPT 119
Query: 440 ---------AVTVKADSKPKAKPVE----EVKPESDDDDDDESGEEDDSEEDGSDSEKGM 580
A VKAD+KPKAKP E E KPES D++DES +ED+SEED DSEKGM
Sbjct: 120 AVTANGNAGAAVVKADTKPKAKPAEVKPAEEKPES--DEEDESDDEDESEED-DDSEKGM 176
Query: 581 DVDEDDSED--EDDSED-EDDETPKKPVVSNKKRPNESAASKASLSAKKAKPA-----TP 736
DVDEDDS+D E+DSED E++ETPKKP NKKRPNES SK +S KKAKPA TP
Sbjct: 177 DVDEDDSDDDEEEDSEDEEEEETPKKPEPINKKRPNES-VSKTPVSGKKAKPAAAPASTP 235
Query: 737 HPAKKGGKSPVNANQSPKSGGQSPSGAGSNKKQFNSGKQFGSNNKGKGKGKGR 895
+K K GG+SP A + K + G+ G NN K G+
Sbjct: 236 QKTEKKKGGHTATPHPAKKGGKSPVNANQSPK--SGGQSSGGNNNKKPFNSGK 286
>gi|224104989|ref|XP_002313645.1| histone deacetylase [Populus trichocarpa]
Length = 275
Score = 202 bits (513), Expect = 9e-050
Identities = 133/277 (48%), Positives = 173/277 (62%), Gaps = 17/277 (6%)
Frame = +2
Query: 92 TMEFWGVEVLAGKSVKVKPDFETLIHVSQASLDKGKKG-ETALLYVTVDGKKLVMGTLSQ 268
+MEFWGVEV AG+ +KV+P +IH+SQA+L + KKG E+ L+V D KKLV+GTLS
Sbjct: 3 SMEFWGVEVKAGEPLKVEPKDFCMIHLSQAALGESKKGNESVPLFVKFDEKKLVLGTLSP 62
Query: 269 GNIPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNTSEEEDFSDSEEEEE---AAAVPA 439
NIPQ+SFDLVFEKEFELSH+ + GSV F GY+ + DFS EE+ E A + A
Sbjct: 63 ENIPQLSFDLVFEKEFELSHNWKKGSVFFCGYQVIPDDDASDFSGDEEDFEFAKADIMKA 122
Query: 440 AVTVKADSKPKAKPVEEVKPESDDDDDDESGEEDDSEEDGSDSEKGMDVDEDDSEDEDDS 619
A +KP+ V+P DDD+DD +EDDS+EDG DSE+GM +DE DS+DE DS
Sbjct: 123 ATAKDKAAKPEKPKATLVEPSIDDDEDD--SDEDDSDEDG-DSEEGMSLDE-DSDDESDS 178
Query: 620 EDEDDETPKKPVVSNKKRPNESAASKASLSAKKAKPATPH--PAKKGGK-SPVNANQSPK 790
EDE ETPKK S KKR +S A+K +S+KKAK ATP AKK G+ +P A
Sbjct: 179 EDE--ETPKKAETS-KKRATDS-ATKTPVSSKKAKTATPQKTDAKKAGQVTPHPAKGKAA 234
Query: 791 SGGQSPSG--AGSNKKQFNSGKQFGSNNKGKGKGKGR 895
+ G S +G N + K FG++ K + +
Sbjct: 235 ANGNSSKSPKSGGNFSCKSCDKAFGTDGALKSHSQAK 271
>gi|118482036|gb|ABK92949.1| unknown [Populus trichocarpa]
Length = 275
Score = 201 bits (511), Expect = 1e-049
Identities = 133/277 (48%), Positives = 173/277 (62%), Gaps = 17/277 (6%)
Frame = +2
Query: 92 TMEFWGVEVLAGKSVKVKPDFETLIHVSQASLDKGKKG-ETALLYVTVDGKKLVMGTLSQ 268
+MEFWGVEV AG+ +KV+P +IH+SQA+L + KKG E+ L+V D KKLV+GTLS
Sbjct: 3 SMEFWGVEVKAGEPLKVEPKDFCMIHLSQAALGESKKGNESVPLFVKFDEKKLVLGTLSP 62
Query: 269 GNIPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNTSEEEDFSDSEEEEE---AAAVPA 439
NIPQ+SFDLVFEKEFELSH+ + GSV F GY+ + DFS EE+ E A + A
Sbjct: 63 ENIPQLSFDLVFEKEFELSHNWKKGSVFFCGYQVIPDDDASDFSGDEEDFEFAKADIMKA 122
Query: 440 AVTVKADSKPKAKPVEEVKPESDDDDDDESGEEDDSEEDGSDSEKGMDVDEDDSEDEDDS 619
A +KP+ V+P DDD+DD +EDDS+EDG DSE+GM +DE DS+DE DS
Sbjct: 123 ATAKDKAAKPEKPKATLVEPSIDDDEDD--SDEDDSDEDG-DSEEGMSLDE-DSDDESDS 178
Query: 620 EDEDDETPKKPVVSNKKRPNESAASKASLSAKKAKPATP--HPAKKGGK-SPVNANQSPK 790
EDE ETPKK S KKR +S A+K +S+KKAK ATP AKK G+ +P A
Sbjct: 179 EDE--ETPKKAETS-KKRATDS-ATKTPVSSKKAKTATPLKTDAKKAGQVTPHPAKGKAA 234
Query: 791 SGGQSPSG--AGSNKKQFNSGKQFGSNNKGKGKGKGR 895
+ G S +G N + K FG++ K + +
Sbjct: 235 ANGNSSKSPKSGGNFSCKSCDKAFGTDGALKSHSQAK 271
>gi|269969916|gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]
Length = 282
Score = 186 bits (472), Expect = 5e-045
Identities = 118/289 (40%), Positives = 166/289 (57%), Gaps = 40/289 (13%)
Frame = +2
Query: 95 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLDKGKK---GETALLYVTVDGKKLVMGTLS 265
MEFWG EV +G+ + V+P + ++H+SQASL + KK E L V VDGKKL +GTL+
Sbjct: 1 MEFWGAEVKSGQPLTVQPGDDMVLHLSQASLGEAKKDKGSEPVCLSVNVDGKKLALGTLN 60
Query: 266 QGNIPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNTSEEEDFSDSEEEEEAAAVPAAV 445
+PQ FDLVF+++FELSH+ ++GSV+F GYK+ N E+E+ D +E +E + A
Sbjct: 61 LDKLPQQQFDLVFDRDFELSHNWKNGSVYFFGYKAANPYEQEE--DEDESDEEIPLTLAN 118
Query: 446 TVKADSKPKAK---------PVEEVKPESDDDDDDESGEEDDSEEDGSDSEKGMDVDEDD 598
T K+++K A + E ++ DD+D+S +EDD+ ED DSE G D
Sbjct: 119 TGKSEAKASANDSASGKQKVKIAEPSKDAKADDEDDSSDEDDTSEDEEDSEMGED----- 173
Query: 599 SEDEDDSEDEDDETPKKPVVSNKKRPNESAASKASLSAKKAK---------------PAT 733
ED+ D + D+ETPKK S KKRP++SA K KKAK AT
Sbjct: 174 -EDDSDEDQSDEETPKKAEPS-KKRPSDSAI-KTPAPDKKAKFATPQKTDGKKGAVHVAT 230
Query: 734 PHPAKKGGKSPVN-ANQSPKSGGQSPSGAGSNKKQFNSGKQFGSNNKGK 877
PHP+K+ GK+ N +NQ+PKSGG S + F S S++K K
Sbjct: 231 PHPSKQAGKTSGNKSNQTPKSGGSLACKTCS--RTFGSETALESHSKAK 277
>gi|297815600|ref|XP_002875683.1| hypothetical protein ARALYDRAFT_484880
[Arabidopsis lyrata subsp. lyrata]
Length = 247
Score = 173 bits (438), Expect = 4e-041
Identities = 107/237 (45%), Positives = 135/237 (56%), Gaps = 7/237 (2%)
Frame = +2
Query: 95 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLD--KGKKGETALLYVTVDGKKLVMGTLSQ 268
MEFWG+EV GK V V P TLIHVSQASL K KKGE L+V V + LV+GTLS
Sbjct: 1 MEFWGIEVKPGKPVTVTPKEGTLIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60
Query: 269 GNIPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNTSEEEDFSDSEEEEEAAAVPAAVT 448
NIPQ+ DLVFEKEFELSH+ GSV+FVGYK+PN + + EEEEE VPA
Sbjct: 61 ENIPQLFCDLVFEKEFELSHTWGKGSVYFVGYKTPNI--KYPLNSEEEEEEVEEVPAGNA 118
Query: 449 VKADSKPKAKPVEEVKPESD-DDDDDESGEEDDSEEDGSDSEKGMDVDEDDSEDEDDSED 625
KA +KPKAKP EVKP +D ++DD +S E D+ + DG D + + + + +
Sbjct: 119 AKAVAKPKAKPA-EVKPVADAEEDDSDSDEMDEDDSDGDDDSEEEEETPTPKKPASNKKR 177
Query: 626 EDDETPKKPVVSNKKRPNESAASKASLSAKKAKPATPHPAKKGGKSPVNANQSPKSG 796
++ PK P VS+KK K KPAT P S + ++ SG
Sbjct: 178 ANETAPKTP-VSSKKAKVAVTPQKTGKDINTPKPATQSPKSASQVSCGSCKKTFNSG 233
>gi|18407844|ref|NP_566872.1| histone deacetylase HDT1 [Arabidopsis thaliana]
Length = 245
Score = 170 bits (429), Expect = 5e-040
Identities = 109/237 (45%), Positives = 138/237 (58%), Gaps = 10/237 (4%)
Frame = +2
Query: 95 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLD--KGKKGETALLYVTVDGKKLVMGTLSQ 268
MEFWG+EV +GK V V P+ LIHVSQASL K KKGE L+V V + LV+GTLS
Sbjct: 1 MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60
Query: 269 GNIPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNTSEEEDFSDSEEEEEAAAVPAAVT 448
NIPQ+ DLVF+KEFELSH+ GSV+FVGYK+PN E + +S+ EEEEE VPA
Sbjct: 61 ENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKTPNI-EPQGYSEEEEEEE-EEVPAGNA 118
Query: 449 VKADSKPKAKPVEEVKPESDDDDDD-ESGEEDDSEEDGSDSEKGMDVDEDDSEDEDDSED 625
KA +KPKAKP EVKP DD++D+ +S D+ + DG DSE+ +E + S+
Sbjct: 119 AKAVAKPKAKPA-EVKPAVDDEEDESDSDGMDEDDSDGEDSEE----EEPTPKKPASSKK 173
Query: 626 EDDETPKKPVVSNKKRPNESAASKASLSAKKAKPATPHPAKKGGKSPVNANQSPKSG 796
+ET K VS KK K K K A P S + ++ SG
Sbjct: 174 RANETTPKAPVSAKKAKVAVTPQKTDEKKKGGKAANQSPKSASQVSCGSCKKTFNSG 230
>gi|73919938|sp|Q6V9I6.1|HDT1_SOLCH RecName: Full=Histone deacetylase HDT1;
AltName: Full=Histone deacetylase 2a; Short=HD2a; AltName: Full=ScHD2a
Length = 269
Score = 170 bits (429), Expect = 5e-040
Identities = 109/278 (39%), Positives = 156/278 (56%), Gaps = 31/278 (11%)
Frame = +2
Query: 95 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLD--KGKKGETALLYVTVDGKKLVMGTLSQ 268
MEFWG EV +G+ + V+P ++H+SQASL K K E+ L V +DGKKLV+GTL+
Sbjct: 1 MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKSESVCLSVNIDGKKLVLGTLNS 60
Query: 269 GNIPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNTSEEEDFSDSEEEEEAAAVPAAVT 448
+PQ FDLVF+++FELSH+L+SGSV+F GYK+ N EEE+ + + +E +P +T
Sbjct: 61 EKVPQQQFDLVFDRDFELSHNLKSGSVYFFGYKATNPFEEEEDDEDDYDESDEDIP--LT 118
Query: 449 VKADSKPKAKPVEEVKPESDDDDDDESGEE--------DDSEEDGSDSEKGMDVDEDDSE 604
+ KP+ K +S+ D SG++ D E++ SD D D D E
Sbjct: 119 LANSGKPEPKEA----GKSNAGKDSASGKQKVRIVEPTKDDEDESSD-----DDDSDMGE 169
Query: 605 DEDDSEDEDDETPKKPVVSNKKRPNESAASKASLSAKKAKPATPH--PAKKGGKSPVNAN 778
DEDDS+D ++ETPKK KR +A+K ++ KKAK TP KKGG +
Sbjct: 170 DEDDSDDSEEETPKK--AEPAKRRKADSATKTPVTDKKAKLTTPQKTDGKKGGGHVATPH 227
Query: 779 QSPKSGGQSPSGAGSN-----KKQFNSGKQFGSNNKGK 877
S K ++P AGS+ + F S S++K K
Sbjct: 228 PS-KQASKTPKSAGSHHCKPCNRSFGSEGALDSHSKAK 264
>gi|2392769|gb|AAB70032.1| putative histone deacetylase [Arabidopsis thaliana]
Length = 257
Score = 170 bits (429), Expect = 5e-040
Identities = 109/237 (45%), Positives = 138/237 (58%), Gaps = 10/237 (4%)
Frame = +2
Query: 95 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLD--KGKKGETALLYVTVDGKKLVMGTLSQ 268
MEFWG+EV +GK V V P+ LIHVSQASL K KKGE L+V V + LV+GTLS
Sbjct: 1 MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60
Query: 269 GNIPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNTSEEEDFSDSEEEEEAAAVPAAVT 448
NIPQ+ DLVF+KEFELSH+ GSV+FVGYK+PN E + +S+ EEEEE VPA
Sbjct: 61 ENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKTPNI-EPQGYSEEEEEEE-EEVPAGNA 118
Query: 449 VKADSKPKAKPVEEVKPESDDDDDD-ESGEEDDSEEDGSDSEKGMDVDEDDSEDEDDSED 625
KA +KPKAKP EVKP DD++D+ +S D+ + DG DSE+ +E + S+
Sbjct: 119 AKAVAKPKAKPA-EVKPAVDDEEDESDSDGMDEDDSDGEDSEE----EEPTPKKPASSKK 173
Query: 626 EDDETPKKPVVSNKKRPNESAASKASLSAKKAKPATPHPAKKGGKSPVNANQSPKSG 796
+ET K VS KK K K K A P S + ++ SG
Sbjct: 174 RANETTPKAPVSAKKAKVAVTPQKTDEKKKGGKAANQSPKSASQVSCGSCKKTFNSG 230
>gi|255638252|gb|ACU19439.1| unknown [Glycine max]
Length = 288
Score = 164 bits (415), Expect = 2e-038
Identities = 100/226 (44%), Positives = 137/226 (60%), Gaps = 14/226 (6%)
Frame = +2
Query: 95 MEFWGVEVLAGKSVKVKPDFETLIHVSQASL---DKGKKGETALLYVTVDGKKLVMGTLS 265
MEFWGVEV +G+S+KV P + +IH+S A L K K+G LYV +KLV+GTLS
Sbjct: 1 MEFWGVEVKSGESLKVDPGDDKIIHLSNACLGDVTKDKEGLPVALYVKFGNQKLVLGTLS 60
Query: 266 QGNIPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNTSEEEDFSDSEEEEEAAAVPAA- 442
PQIS+DLVFEKEFELSH+ + GSV F G+K+ + SE ++ DS++ +E V AA
Sbjct: 61 SEAFPQISYDLVFEKEFELSHNWKHGSVFFTGFKAQSQSESDNDEDSDDFDEDIPVSAAN 120
Query: 443 ----VTVKADSKPKAKPVEEVK-PESDDDDDDESGEEDDSEEDGSDSEKGMDVDE--DDS 601
+ VK KP A ++ K +D+D ES +DDS ED + ++ E DDS
Sbjct: 121 GKPEIEVKNGIKPDANEAKQKKIANGEDEDSSESESDDDSSEDQLTANGDIESSEGDDDS 180
Query: 602 EDEDDSEDE-DDETPKKPVVSNKKRPNESAASKASLSAKKAKPATP 736
+DE++ +DE D+ETPKK SNK+ + S K + KK K TP
Sbjct: 181 DDEEEGDDESDEETPKKIEASNKRGIDSS--KKTPVPVKKTKFVTP 224
>gi|30688577|ref|NP_851056.1| histone deacetylase HDT2 [Arabidopsis thaliana]
Length = 306
Score = 164 bits (414), Expect = 3e-038
Identities = 109/281 (38%), Positives = 154/281 (54%), Gaps = 21/281 (7%)
Frame = +2
Query: 95 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLD-KGKKGETALLYVTVDGKKLVMGTLSQG 271
MEFWGV V + KV P+ ++L+H+SQASLD K GE+ +L VTV G KLV+GTLSQ
Sbjct: 1 MEFWGVAVTPKNATKVTPEEDSLVHISQASLDCTVKSGESVVLSVTVGGAKLVIGTLSQD 60
Query: 272 NIPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNTSEEEDFSDSEEEE--EAAAVPAAV 445
PQISFDLVF+KEFELSHS +VHF+GYKSPN E++DF+ S++E+ EA PA
Sbjct: 61 KFPQISFDLVFDKEFELSHSGTKANVHFIGYKSPNI-EQDDFTSSDDEDVPEAVPAPAPT 119
Query: 446 TVKADSKPKAKPVE-EVKPESDDDDDDESGEEDDS-EEDGSDSEKGMDVDEDDSEDEDDS 619
V A+ A V+ + KP++ + + E+ +S EED SD DED+SE++DDS
Sbjct: 120 AVTANGNAGAAVVKADTKPKAKPAEVKPAEEKPESDEEDESD-------DEDESEEDDDS 172
Query: 620 E-----DEDDETPKKPVVSNKKRPNESAASKASLSAKKAKPA---TPHPAKKGGKSPVNA 775
E DEDD + S + E+ ++ K+ + TP KK + A
Sbjct: 173 EKGMDVDEDDSDDDEEEDSEDEEEEETPKKPEPINKKRPNESVSKTPVSGKKAKPAAAPA 232
Query: 776 NQSPKSGGQSPSGAGSNKKQFNSGKQFGSNNKGKGKGKGRA 898
+ K+ + G + G + N K G++
Sbjct: 233 STPQKTEEKKKGGHTATPHPAKKGGKSPVNANQSPKSGGQS 273
>gi|334185733|ref|NP_001190012.1| histone deacetylase HDT1 [Arabidopsis
thaliana]
Length = 242
Score = 161 bits (407), Expect = 2e-037
Identities = 101/228 (44%), Positives = 132/228 (57%), Gaps = 15/228 (6%)
Frame = +2
Query: 95 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLD--KGKKGETALLYVTVDGKKLVMGTLSQ 268
MEFWG+EV +GK V V P+ LIHVSQASL K KKGE L+V V + LV+GTLS
Sbjct: 1 MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60
Query: 269 GNIPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNTSEEEDFSDSEEEEEAAAVPAAVT 448
NIPQ+ DLVF+KEFELSH+ GSV+FVGYK+PN E + +S+ EEEE VPA
Sbjct: 61 ENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKTPNI-EPQGYSEEEEEE----VPAGNA 115
Query: 449 VKADSKPKAKPVEEVKPESDDDDDD-ESGEEDDSEEDGSDSEKGMDVDEDDSEDEDDSED 625
KA +KPKAKP EVKP DD++D+ +S D+ + DG DSE+ + + + + +
Sbjct: 116 AKAVAKPKAKPA-EVKPAVDDEEDESDSDGMDEDDSDGEDSEEEEPTPKKPASSKKRANE 174
Query: 626 EDDETP------KKPVVSNKKRPNESAASKASLSAKKAKPATPHPAKK 751
+ P K V K + A+ S K A + KK
Sbjct: 175 TTPKAPVSAKKAKVAVTPQKTDEKKKGGKAANQSPKSASQVSCGSCKK 222
>gi|297808263|ref|XP_002872015.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 307
Score = 159 bits (402), Expect = 7e-037
Identities = 106/276 (38%), Positives = 157/276 (56%), Gaps = 31/276 (11%)
Frame = +2
Query: 101 FWGVEVLAGKSVKVKPDFETLIHVSQASLD-KGKKGETALLYVTVDGKKLVMGTLSQGNI 277
+ G+EV GK KV P+ ++L+H+SQASLD K K GE+ +L VTVDG KLV+GTLSQ
Sbjct: 9 YLGIEVKPGKPTKVTPEEDSLVHISQASLDCKVKSGESVVLTVTVDGTKLVIGTLSQEKF 68
Query: 278 PQISFDLVFEKEFELSHSLESGSVHFVGYKSPNTSEEEDFSDSEEEE--EA--AAVPAAV 445
PQISFDLVFE+EFE+SH+ G+VHFVGY+SPN + ED++ SEEE+ EA A VPAAV
Sbjct: 69 PQISFDLVFEREFEISHNGTKGTVHFVGYRSPNI-DHEDYTSSEEEDVPEAVPAPVPAAV 127
Query: 446 TVKADSKPKAKPV--EEVKPESDDDDDDESGEEDDSEEDGSDSEKGMDVDEDDSEDEDDS 619
V + A V + KP++ + + + +SE+D S+ +ED+S D+DDS
Sbjct: 128 AVNGSAGAAASNVVKADSKPKAKPAEVKPAEVKPESEDDEDSSD-----EEDESADDDDS 182
Query: 620 E-----DEDDETPKKPVVSNKKRPNESAASKASLSAKKAKPAT-PHPAKKGGKSPVNANQ 781
E DEDD ++ + + + + KK +P P + K+PV+ +
Sbjct: 183 EKGMDVDEDDSDDEE----------DESEEEEEETPKKPEPINKKRPNESTSKTPVSGKK 232
Query: 782 SPKSGGQSPSGAGSNKKQFNSGKQFGSNNKGKGKGK 889
+ + +P+ ++ G + + K GK
Sbjct: 233 AKPAA--APAATPQKTEEKKKGGHTATPHPAKKSGK 266
>gi|255573038|ref|XP_002527449.1| Histone deacetylase 2a, putative [Ricinus
communis]
Length = 310
Score = 159 bits (400), Expect = 1e-036
Identities = 91/238 (38%), Positives = 140/238 (58%), Gaps = 10/238 (4%)
Frame = +2
Query: 95 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLDKGKK---GETALLYVTVDGKKLVMGTLS 265
MEFWGVE+ AG+++KV+P+ E+LIH+SQA+L + KK E+ LYV VD KK+++GTLS
Sbjct: 1 MEFWGVEIKAGETLKVEPNPESLIHLSQAALGESKKEKGNESVPLYVKVDNKKIILGTLS 60
Query: 266 QGNIPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNTSEEEDFSDSEEEEE-----AAA 430
Q N PQI+FD+VFEKE ELSH+ ++GSV+ GY++P E++ FS+ E ++E A
Sbjct: 61 QENFPQIAFDIVFEKEVELSHNWKNGSVYLSGYQTPLPEEDDMFSEEESDDEEPLPLVNA 120
Query: 431 VPAAVTVKADSKPKAKPVEEVKPESDDDDDDESGEEDDSEEDGSDSEKGMDVDEDDSEDE 610
+ + K AK KPES + + +EE D ++ D D+D+ +DE
Sbjct: 121 DNGGIQLAGTQKAAAKS-NIAKPESSTKQKAKPVQPSKAEEASDDDDESDDDDDDEDDDE 179
Query: 611 DDSEDEDDETPKKPVVSNKKRPNESAASKASLSAKKAKPATPHPAKKGGKSPVNANQS 784
D+S+DED+ V + +S S+ + KKA K+PV++ ++
Sbjct: 180 DESDDEDESEEGMSVDEDSDDEGDS-ESEDEETPKKADKGKKRQNDSAVKTPVSSKKA 236
>gi|73919943|sp|Q9M4U4.1|HDT3_MAIZE RecName: Full=Histone deacetylase HDT3;
AltName: Full=Histone deacetylase 2c; Short=HD2c; AltName:
Full=Zm-HD2c
Length = 300
Score = 156 bits (393), Expect = 7e-036
Identities = 98/269 (36%), Positives = 148/269 (55%), Gaps = 18/269 (6%)
Frame = +2
Query: 95 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLDKGKKGETALLYVTVDGKKLVMGTLSQGN 274
MEFWG+EV G +VK +P + ++H+SQA+L + KK + AL+YV +D +KL +GTLS
Sbjct: 1 MEFWGLEVKPGSTVKCEPGYGFVLHLSQAALGESKKSDNALMYVKIDDQKLAIGTLSVDK 60
Query: 275 IPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNTSEEEDFS-DSEEEEEAAAVPAA-VT 448
P I FDL+F+KEFELSH+ ++ SV F GYK EE++ DSE+E+E VPA
Sbjct: 61 NPHIQFDLIFDKEFELSHTSKTTSVFFTGYKVEQPFEEDEMDLDSEDEDEELNVPAVKEN 120
Query: 449 VKAD-SKPKAKPVEEVKPESDDDDDDESGEEDDSEEDGSDSEKGMDVDEDDSEDEDDS-- 619
KAD K K++ P D +S ++DDS+ED +D D DED+++D D+
Sbjct: 121 GKADEKKQKSQEKAVAAPSKSSPDSKKSKDDDDSDEDETD-----DSDEDETDDSDEGLS 175
Query: 620 -EDEDDETPKKPVVSNKKRPNESAASKASLSAKKAKPA----TPHPAKKGGKSPVNANQS 784
E+ DD++ + S+ + + K + K+A + TP K K+ V S
Sbjct: 176 PEEGDDDSSDEDDTSDDEEEDTPTPKKPEVGKKRAAESSVLKTPLSDK---KAKVATPSS 232
Query: 785 PKSGGQSPSGAGSNKKQFNSGKQFGSNNK 871
K+GG+ + GK +N+K
Sbjct: 233 QKTGGKKGAAVHVATPHPAKGKTIVNNDK 261
>gi|162459285|ref|NP_001105402.1| histone deacetylase HDT1 [Zea mays]
Length = 307
Score = 155 bits (390), Expect = 2e-035
Identities = 95/266 (35%), Positives = 146/266 (54%), Gaps = 12/266 (4%)
Frame = +2
Query: 95 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLDKGKKGETALLYVTVDGKKLVMGTLSQGN 274
MEFWG+EV G +VK +P + ++H+SQA+L + KK + AL+YV +D +KL +GTLS
Sbjct: 1 MEFWGLEVKPGSTVKCEPGYGFVLHLSQAALGESKKSDNALMYVKIDDQKLAIGTLSVDK 60
Query: 275 IPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNTSEEEDFS-DSEEEEEAAAVPAA-VT 448
P I FDL+F+KEFELSH+ ++ SV F GYK EE++ DSE+E+E VP
Sbjct: 61 NPHIQFDLIFDKEFELSHTSKTTSVFFTGYKVEQPFEEDEMDLDSEDEDEELNVPVVKEN 120
Query: 449 VKAD-SKPKAKPVEEVKPESDDDDDDESGEEDDSEEDGSDSEKGMDVDEDDSEDEDD--- 616
KAD K K++ P D +S ++DDS+ED +D D DED+++D D+
Sbjct: 121 GKADEKKQKSQEKAVAAPSKSSPDSKKSKDDDDSDEDETD-----DSDEDETDDSDEGLS 175
Query: 617 SEDEDDETPKKPVVSNKKRPNESAASKASLSAKK-AKPATPHPAKKGGKSPVNANQSPKS 793
SE+ DD++ + S+ + + K + K+ A+ + K+ V S K+
Sbjct: 176 SEEGDDDSSDEDDTSDDEEEDTPTPKKPEVGKKRPAESSVLKTPLSDKKAKVATPSSQKT 235
Query: 794 GGQSPSGAGSNKKQFNSGKQFGSNNK 871
GG+ + GK +N+K
Sbjct: 236 GGKKGAAVHVATPHPAKGKTIVNNDK 261
>gi|195606718|gb|ACG25189.1| histone deacetylase 2b [Zea mays]
Length = 300
Score = 154 bits (389), Expect = 2e-035
Identities = 97/269 (36%), Positives = 147/269 (54%), Gaps = 18/269 (6%)
Frame = +2
Query: 95 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLDKGKKGETALLYVTVDGKKLVMGTLSQGN 274
MEFWG+EV G +VK +P + ++H+SQA+L + KK + AL+YV +D +KL +GTLS
Sbjct: 1 MEFWGLEVKPGSTVKCEPGYGFVLHLSQAALGESKKSDNALMYVKIDDQKLAIGTLSVDK 60
Query: 275 IPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNTSEEEDFS-DSEEEEEAAAVPAA-VT 448
P I FDL+F+KEFELSH+ ++ SV F GYK EE++ DSE+E+E VP
Sbjct: 61 NPHIQFDLIFDKEFELSHTSKTTSVFFTGYKVEQPFEEDEMDLDSEDEDEELNVPVVKEN 120
Query: 449 VKAD-SKPKAKPVEEVKPESDDDDDDESGEEDDSEEDGSDSEKGMDVDEDDSEDEDDS-- 619
KAD K K++ P D +S ++DDS+ED +D D DED+++D D+
Sbjct: 121 GKADEKKQKSQEKAVAAPSKSSPDSKKSKDDDDSDEDETD-----DSDEDETDDSDEGLS 175
Query: 620 -EDEDDETPKKPVVSNKKRPNESAASKASLSAKKAKPA----TPHPAKKGGKSPVNANQS 784
E+ DD++ + S+ + + K + K+A + TP K K+ V S
Sbjct: 176 PEEGDDDSSDEDDTSDDEEEDTPTPKKPEVGKKRAAESSVLKTPLSDK---KAKVATPSS 232
Query: 785 PKSGGQSPSGAGSNKKQFNSGKQFGSNNK 871
K+GG+ + GK +N+K
Sbjct: 233 QKTGGKKGAAVHVATPHPAKGKTIVNNDK 261
>gi|195639676|gb|ACG39306.1| histone deacetylase 2b [Zea mays]
Length = 304
Score = 153 bits (385), Expect = 6e-035
Identities = 96/250 (38%), Positives = 142/250 (56%), Gaps = 22/250 (8%)
Frame = +2
Query: 95 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLDKGKKGETALLYVTVDGKKLVMGTLSQGN 274
MEFWG+EV G +VK +P + ++H+SQA+L + KK + AL+YV +D +KL +GTLS
Sbjct: 1 MEFWGLEVKPGSTVKCEPGYGFVLHLSQAALGESKKSDNALMYVKIDDQKLAIGTLSVDK 60
Query: 275 IPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNTSEEEDFS-----DSEEEEEAAAVPA 439
P I FDLVF+KEFELSH+ ++ SV F GYK EE++ S DSE+E+E VP
Sbjct: 61 NPHIQFDLVFDKEFELSHTSKTTSVFFTGYKVEQPFEEDEPSSTMDLDSEDEDEERDVPV 120
Query: 440 A-VTVKAD-SKPKAKPVEEVKPESDDDDDDESGEEDDSEEDGSDSEKGMDVDEDDSEDED 613
KAD K K++ P D +S ++DDS+ED +D D DED+++D D
Sbjct: 121 VKENGKADGKKQKSQEKAVAAPSKSSPDSKKSKDDDDSDEDETD-----DSDEDETDDSD 175
Query: 614 D---SEDEDDETPKKPVVSNKKRPNESAASKASLSAKKAKPA----TPHPAKKGGKSPVN 772
+ SE+ DD++ + S+ + + K + K+A + TP K K+ V
Sbjct: 176 EGLSSEEGDDDSSDEDDTSDDEEEDTPTPKKPEVGKKRAAESSVLKTPLSDK---KAKVA 232
Query: 773 ANQSPKSGGQ 802
S K+GG+
Sbjct: 233 TPSSQKTGGK 242
>gi|162463122|ref|NP_001105631.1| histone deacetylase HDT2 [Zea mays]
Length = 303
Score = 149 bits (374), Expect = 1e-033
Identities = 99/236 (41%), Positives = 127/236 (53%), Gaps = 13/236 (5%)
Frame = +2
Query: 95 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLDKGKKGETALLYVTVDGKKLVMGTLSQGN 274
MEFWG+EV G +VK +P ++HVSQA+L + KK ++AL+YV VD KKL +GTLS
Sbjct: 1 MEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKKSDSALMYVKVDDKKLAIGTLSIDK 60
Query: 275 IPQISFDLVFEKEFELSHSLESGSVHFVGYK--SPNTSEEEDFSDSEEEEEAAAVPA-AV 445
PQI FDLVF KEFELSH+ ++ SV F GYK P +E D DSE+EEE +P
Sbjct: 61 YPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQPIEGDEMDL-DSEDEEEELNIPVIKE 119
Query: 446 TVKADSKPKAKPVEEVKPESDDDDDDESGEEDDSEEDGSDSEKGMDVDEDDSEDEDDSED 625
KAD K + K E K + G E S++D DS D DE D DEDDS+D
Sbjct: 120 NGKADGKEEQKNQE--KAVAATASKSSLGLEKKSKDDSDDS----DEDESDDSDEDDSDD 173
Query: 626 EDDETPKKPVVSNKKRPNESAASKASLSAKKAKPATPHPAKKGGKSPVNANQSPKS 793
D+ P + +E S + P P KK G NA ++P S
Sbjct: 174 SDEGEGLSPDEGDDDSSDEDDTSDDD-EEETPTPKKPEAGKKRGAE--NALKTPLS 226
>gi|81074563|gb|ABB55369.1| histone deacetylase 2a-like [Solanum tuberosum]
Length = 203
Score = 149 bits (374), Expect = 1e-033
Identities = 82/202 (40%), Positives = 126/202 (62%), Gaps = 11/202 (5%)
Frame = +2
Query: 95 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLD--KGKKGETALLYVTVDGKKLVMGTLSQ 268
MEFWG EV +G+ + V+P ++H+SQASL K K E+ L V +DGKKLV+GTL+
Sbjct: 1 MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKSESVCLSVNIDGKKLVLGTLNS 60
Query: 269 GNIPQISFDLVFEKEFELSHSLESGSVHFVGYKSPNTSEEEDFSDSEEEEEAAAVPAAVT 448
+PQ FDLVF+++FELSH+L+SGSV+F GYK+ N EEE+ + + +E +P +T
Sbjct: 61 EKVPQQQFDLVFDRDFELSHNLKSGSVYFFGYKATNPFEEEEDDEDDYDESDEDIP--LT 118
Query: 449 VKADSKPKAKPVEEVKPESDDDDDDESGEEDDSEEDGSDSEKGMDVDEDDS---EDEDDS 619
+ KP+ K +S+ D SG++ + + ++ D+DDS EDEDDS
Sbjct: 119 LANSGKPEPKEA----GKSNAGKDSASGKQKVRIVEPTKDDEDESSDDDDSELGEDEDDS 174
Query: 620 EDEDDETPKKPVVSNKKRPNES 685
+D ++ETPKK + K++ + +
Sbjct: 175 DDSEEETPKKAEPAKKRKADSA 196
>gi|194694834|gb|ACF81501.1| unknown [Zea mays]
Length = 303
Score = 149 bits (374), Expect = 1e-033
Identities = 99/236 (41%), Positives = 127/236 (53%), Gaps = 13/236 (5%)
Frame = +2
Query: 95 MEFWGVEVLAGKSVKVKPDFETLIHVSQASLDKGKKGETALLYVTVDGKKLVMGTLSQGN 274
MEFWG+EV G +VK +P ++HVSQA+L + KK ++AL+YV VD KKL +GTLS
Sbjct: 1 MEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKKSDSALMYVKVDDKKLAIGTLSIDK 60
Query: 275 IPQISFDLVFEKEFELSHSLESGSVHFVGYK--SPNTSEEEDFSDSEEEEEAAAVPA-AV 445
PQI FDLVF KEFELSH+ ++ SV F GYK P +E D DSE+EEE +P
Sbjct: 61 YPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQPIEGDEMDL-DSEDEEEELNIPVIKE 119
Query: 446 TVKADSKPKAKPVEEVKPESDDDDDDESGEEDDSEEDGSDSEKGMDVDEDDSEDEDDSED 625
KAD K + K E K + G E S++D DS D DE D DEDDS+D
Sbjct: 120 NGKADGKEEQKNQE--KAVAATASKSSLGLEKKSKDDSDDS----DEDESDDSDEDDSDD 173
Query: 626 EDDETPKKPVVSNKKRPNESAASKASLSAKKAKPATPHPAKKGGKSPVNANQSPKS 793
D+ P + +E S + P P KK G NA ++P S
Sbjct: 174 SDEGEGLSPDEGDDDSSDEDDTSDDD-EEETPTPKKPEAGKKRGAE--NALKTPLS 226
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 748,178,612,197
Number of Sequences: 15229318
Number of Extensions: 748178612197
Number of Successful Extensions: 201585142
Number of sequences better than 0.0: 0
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