BLASTX 7.6.2
Query= UN06320 /QuerySize=1470
(1469 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q99020|ROAA_MOUSE Heterogeneous nuclear ribonucleoprotein A/B... 64 3e-009
sp|Q99729|ROAA_HUMAN Heterogeneous nuclear ribonucleoprotein A/B... 62 1e-008
sp|Q54F38|H3V1_DICDI Histone H3.v1 OS=Dictyostelium discoideum G... 60 3e-008
sp|Q76LC6|RBM24_DANRE RNA-binding protein 24 OS=Danio rerio GN=r... 60 3e-008
sp|P10979|GRPA_MAIZE Glycine-rich RNA-binding, abscisic acid-ind... 60 4e-008
sp|Q9BX46|RBM24_HUMAN RNA-binding protein 24 OS=Homo sapiens GN=... 60 5e-008
sp|Q5ZJX4|RBM38_CHICK RNA-binding protein 38 OS=Gallus gallus GN... 59 6e-008
sp|Q9H0Z9|RBM38_HUMAN RNA-binding protein 38 OS=Homo sapiens GN=... 59 6e-008
sp|Q6GQD3|RB24A_XENLA RNA-binding protein 24-A OS=Xenopus laevis... 59 8e-008
sp|Q9I8B3|RB24B_XENLA RNA-binding protein 24-B OS=Xenopus laevis... 59 8e-008
sp|Q5ZMA3|RBM24_CHICK RNA-binding protein 24 OS=Gallus gallus GN... 59 8e-008
sp|Q6P8A7|RBM24_XENTR RNA-binding protein 24 OS=Xenopus tropical... 59 8e-008
sp|Q62176|RBM38_MOUSE RNA-binding protein 38 OS=Mus musculus GN=... 58 1e-007
sp|P49310|GRP1_SINAL Glycine-rich RNA-binding protein GRP1A OS=S... 58 2e-007
sp|Q6DIV4|RBM38_XENTR RNA-binding protein 38 OS=Xenopus tropical... 57 4e-007
sp|P13816|GARP_PLAFF Glutamic acid-rich protein OS=Plasmodium fa... 56 7e-007
sp|Q96EP5|DAZP1_HUMAN DAZ-associated protein 1 OS=Homo sapiens G... 55 9e-007
sp|Q9JII5|DAZP1_MOUSE DAZ-associated protein 1 OS=Mus musculus G... 55 9e-007
sp|Q98SJ2|DAZP1_XENLA DAZ-associated protein 1 OS=Xenopus laevis... 55 9e-007
sp|Q9EPQ2|RPGR1_MOUSE X-linked retinitis pigmentosa GTPase regul... 55 9e-007
>sp|Q99020|ROAA_MOUSE Heterogeneous nuclear ribonucleoprotein A/B OS=Mus
musculus GN=Hnrnpab PE=1 SV=1
Length = 285
Score = 64 bits (154), Expect = 3e-009
Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Frame = +2
Query: 401 KIFVHGLGWDTKTETPIEAFKQYGEIEDCKAVFDKVSGKSKGYGFILFKSRSGARHALKQ 580
K+FV GL WDT + + F ++GE+ DC D +G+S+G+GFILFK S L Q
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 581 PQKKIGSRMTACQLA---SKGPV----FGGSNPVA 664
+ ++ R+ + A K PV GG NP A
Sbjct: 136 KEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEA 170
>sp|Q99729|ROAA_HUMAN Heterogeneous nuclear ribonucleoprotein A/B OS=Homo
sapiens GN=HNRNPAB PE=1 SV=2
Length = 332
Score = 62 bits (149), Expect = 1e-008
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Frame = +2
Query: 401 KIFVHGLGWDTKTETPIEAFKQYGEIEDCKAVFDKVSGKSKGYGFILFKSRSGARHALKQ 580
K+FV GL WDT + + F ++GE+ DC D +G+S+G+GFILFK + L Q
Sbjct: 70 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 129
Query: 581 PQKKIGSRMTACQLA---SKGPV----FGGSNP 658
+ ++ R+ + A K PV GG NP
Sbjct: 130 KEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNP 162
>sp|Q54F38|H3V1_DICDI Histone H3.v1 OS=Dictyostelium discoideum GN=H3v1 PE=3
SV=1
Length = 619
Score = 60 bits (145), Expect = 3e-008
Identities = 33/100 (33%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Frame = +1
Query: 70 KKRKLEAQLAEASSEPSSQKQIATNNNQLNQKEKEVEYEEVEEEHEEEVEEDENDDDEEE 249
K ++ +Q+ E S + SS + NN +Q+E+E E EE EEE EEE EE+E +++EEE
Sbjct: 206 KIQRKTSQIEEESDDDSS-----SQNNSSDQEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 260
Query: 250 EEDDNRMVAAASGSGNHQGDDDDEEPIQDLLEPRCGKSNP 369
EE++ + ++++EE +++ + GK P
Sbjct: 261 EEEEEEEEEEEEEEEEEEEEEEEEEEVREAPKRSGGKPLP 300
>sp|Q76LC6|RBM24_DANRE RNA-binding protein 24 OS=Danio rerio GN=rbm24 PE=2 SV=1
Length = 230
Score = 60 bits (145), Expect = 3e-008
Identities = 32/84 (38%), Positives = 45/84 (53%)
Frame = +2
Query: 383 EDPVHRKIFVHGLGWDTKTETPIEAFKQYGEIEDCKAVFDKVSGKSKGYGFILFKSRSGA 562
+D + KIFV GL + T + + F+ +GEIE+ + D+ +GKS+GYGF+ RS A
Sbjct: 6 KDTTYTKIFVGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRSAA 65
Query: 563 RHALKQPQKKIGSRMTACQLASKG 634
A K P I R LA G
Sbjct: 66 DRACKDPNPIIDGRKANVNLAYLG 89
>sp|P10979|GRPA_MAIZE Glycine-rich RNA-binding, abscisic acid-inducible protein
OS=Zea mays GN=RAB15 PE=1 SV=1
Length = 157
Score = 60 bits (144), Expect = 4e-008
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Frame = +2
Query: 392 VHRKIFVHGLGWDTKTETPIEAFKQYGEIEDCKAVFDKVSGKSKGYGFILFKSRSGARHA 571
V + FV GL W T E+ AF YGEI D K + D+ +G+S+G+GF+ F S + A
Sbjct: 6 VEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDA 65
Query: 572 LKQPQKK--IGSRMTACQLASKGPVFGG 649
++ K G +T Q S+G GG
Sbjct: 66 IENMNGKELDGRNITVNQAQSRGGGGGG 93
>sp|Q9BX46|RBM24_HUMAN RNA-binding protein 24 OS=Homo sapiens GN=RBM24 PE=1
SV=1
Length = 236
Score = 60 bits (143), Expect = 5e-008
Identities = 31/84 (36%), Positives = 45/84 (53%)
Frame = +2
Query: 383 EDPVHRKIFVHGLGWDTKTETPIEAFKQYGEIEDCKAVFDKVSGKSKGYGFILFKSRSGA 562
+D + KIFV GL + T + + F+ +GEIE+ + D+ +GKS+GYGF+ R+ A
Sbjct: 6 KDTTYTKIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAA 65
Query: 563 RHALKQPQKKIGSRMTACQLASKG 634
A K P I R LA G
Sbjct: 66 ERACKDPNPIIDGRKANVNLAYLG 89
>sp|Q5ZJX4|RBM38_CHICK RNA-binding protein 38 OS=Gallus gallus GN=RBM38 PE=2
SV=1
Length = 215
Score = 59 bits (142), Expect = 6e-008
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Frame = +2
Query: 383 EDPVHRKIFVHGLGWDTKTETPIEAFKQYGEIEDCKAVFDKVSGKSKGYGFILFKSRSGA 562
+D KIFV GL + T + + F+ +G+IE+ + D+ +GKS+GYGF+ R+ A
Sbjct: 6 KDTTFTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAA 65
Query: 563 RHALKQPQKKIGSRMTACQLASKGPVFGGSNPVAASSGASIAPAQ 697
A K P I R LA + G+ P + +G +I Q
Sbjct: 66 ERACKDPNPIIDGRKANVNLA-----YLGAKPRSIQTGFTIGVQQ 105
>sp|Q9H0Z9|RBM38_HUMAN RNA-binding protein 38 OS=Homo sapiens GN=RBM38 PE=1
SV=2
Length = 239
Score = 59 bits (142), Expect = 6e-008
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Frame = +2
Query: 377 ADEDPVHRKIFVHGLGWDTKTETPIEAFKQYGEIEDCKAVFDKVSGKSKGYGFILFKSRS 556
+ +D KIFV GL + T + + F+ +G+IE+ + D+ +GKS+GYGF+ R+
Sbjct: 27 SQKDTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRA 86
Query: 557 GARHALKQPQKKIGSRMTACQLASKGPVFGGSNPVAASSGASIAPAQ 697
A A K P I R LA + G+ P + +G +I Q
Sbjct: 87 AAERACKDPNPIIDGRKANVNLA-----YLGAKPRSLQTGFAIGVQQ 128
>sp|Q6GQD3|RB24A_XENLA RNA-binding protein 24-A OS=Xenopus laevis GN=rbm24-a
PE=2 SV=1
Length = 225
Score = 59 bits (141), Expect = 8e-008
Identities = 30/84 (35%), Positives = 45/84 (53%)
Frame = +2
Query: 383 EDPVHRKIFVHGLGWDTKTETPIEAFKQYGEIEDCKAVFDKVSGKSKGYGFILFKSRSGA 562
+D + KIFV GL + T + + F+ +G+IE+ + D+ +GKS+GYGF+ R+ A
Sbjct: 6 KDTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAA 65
Query: 563 RHALKQPQKKIGSRMTACQLASKG 634
A K P I R LA G
Sbjct: 66 ERACKDPNPIIDGRKANVNLAYLG 89
>sp|Q9I8B3|RB24B_XENLA RNA-binding protein 24-B OS=Xenopus laevis GN=rbm24-b
PE=2 SV=1
Length = 224
Score = 59 bits (141), Expect = 8e-008
Identities = 30/84 (35%), Positives = 45/84 (53%)
Frame = +2
Query: 383 EDPVHRKIFVHGLGWDTKTETPIEAFKQYGEIEDCKAVFDKVSGKSKGYGFILFKSRSGA 562
+D + KIFV GL + T + + F+ +G+IE+ + D+ +GKS+GYGF+ R+ A
Sbjct: 6 KDTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAA 65
Query: 563 RHALKQPQKKIGSRMTACQLASKG 634
A K P I R LA G
Sbjct: 66 ERACKDPNPIIDGRKANVNLAYLG 89
>sp|Q5ZMA3|RBM24_CHICK RNA-binding protein 24 OS=Gallus gallus GN=RBM24 PE=2
SV=2
Length = 225
Score = 59 bits (141), Expect = 8e-008
Identities = 30/84 (35%), Positives = 45/84 (53%)
Frame = +2
Query: 383 EDPVHRKIFVHGLGWDTKTETPIEAFKQYGEIEDCKAVFDKVSGKSKGYGFILFKSRSGA 562
+D + KIFV GL + T + + F+ +G+IE+ + D+ +GKS+GYGF+ R+ A
Sbjct: 6 KDTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAA 65
Query: 563 RHALKQPQKKIGSRMTACQLASKG 634
A K P I R LA G
Sbjct: 66 ERACKDPNPIIDGRKANVNLAYLG 89
>sp|Q6P8A7|RBM24_XENTR RNA-binding protein 24 OS=Xenopus tropicalis GN=rbm24
PE=2 SV=1
Length = 226
Score = 59 bits (141), Expect = 8e-008
Identities = 30/84 (35%), Positives = 45/84 (53%)
Frame = +2
Query: 383 EDPVHRKIFVHGLGWDTKTETPIEAFKQYGEIEDCKAVFDKVSGKSKGYGFILFKSRSGA 562
+D + KIFV GL + T + + F+ +G+IE+ + D+ +GKS+GYGF+ R+ A
Sbjct: 6 KDTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAA 65
Query: 563 RHALKQPQKKIGSRMTACQLASKG 634
A K P I R LA G
Sbjct: 66 ERACKDPNPIIDGRKANVNLAYLG 89
>sp|Q62176|RBM38_MOUSE RNA-binding protein 38 OS=Mus musculus GN=Rbm38 PE=2
SV=2
Length = 237
Score = 58 bits (139), Expect = 1e-007
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Frame = +2
Query: 377 ADEDPVHRKIFVHGLGWDTKTETPIEAFKQYGEIEDCKAVFDKVSGKSKGYGFILFKSRS 556
+ +D KIFV GL + T + + F+ +G+IE+ + D+ +GKS+GYGF+ R+
Sbjct: 25 SQKDTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRA 84
Query: 557 GARHALKQPQKKIGSRMTACQLASKGPVFGGSNPVAASSGASIAPAQ 697
A A K P I R LA + G+ P + +G ++ Q
Sbjct: 85 AADRACKDPNPIIDGRKANVNLA-----YLGAKPRSLQTGFAVGVQQ 126
>sp|P49310|GRP1_SINAL Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba
PE=2 SV=1
Length = 166
Score = 58 bits (138), Expect = 2e-007
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Frame = +2
Query: 392 VHRKIFVHGLGWDTKTETPIEAFKQYGEIEDCKAVFDKVSGKSKGYGFILFKSRSGARHA 571
V + FV GL W T AF QYGE+ D K + D+ +G+S+G+GF+ FK + A
Sbjct: 6 VEYRCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDA 65
Query: 572 LK--QPQKKIGSRMTACQLASKGPVFGG 649
++ Q G +T + S+G GG
Sbjct: 66 IEGMNGQDLDGRSITVNEAQSRGSGGGG 93
>sp|Q6DIV4|RBM38_XENTR RNA-binding protein 38 OS=Xenopus tropicalis GN=rbm38
PE=2 SV=1
Length = 219
Score = 57 bits (135), Expect = 4e-007
Identities = 29/84 (34%), Positives = 44/84 (52%)
Frame = +2
Query: 383 EDPVHRKIFVHGLGWDTKTETPIEAFKQYGEIEDCKAVFDKVSGKSKGYGFILFKSRSGA 562
+D KIFV GL + T + + F+ +G+I++ + D+ +GKS+GYGF+ R+ A
Sbjct: 6 KDTTFTKIFVGGLPYHTTDASLRKYFEVFGDIDEAVVITDRQTGKSRGYGFVTMSDRAAA 65
Query: 563 RHALKQPQKKIGSRMTACQLASKG 634
A K P I R LA G
Sbjct: 66 ERACKDPNPIIDGRKANVNLAYLG 89
>sp|P13816|GARP_PLAFF Glutamic acid-rich protein OS=Plasmodium falciparum
(isolate FC27 / Papua New Guinea) GN=GARP PE=4 SV=1
Length = 678
Score = 56 bits (133), Expect = 7e-007
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Frame = +1
Query: 79 KLEAQLAEASSEPSSQKQIATNNNQLNQKEKEVEYEEVEEEHEEEVEEDENDDDEEEEED 258
K E + E+ K++ + ++ + E+E E EE EEE EEE EE+E +++EEEEED
Sbjct: 547 KEEDKKEESKEVQEESKEVQEDEEEVEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEED 606
Query: 259 DNRMVAAASGSGNHQGDDDDEEPIQD 336
++ + + D+DD E +D
Sbjct: 607 EDE-----EDEDDAEEDEDDAEEDED 627
>sp|Q96EP5|DAZP1_HUMAN DAZ-associated protein 1 OS=Homo sapiens GN=DAZAP1 PE=1
SV=1
Length = 407
Score = 55 bits (132), Expect = 9e-007
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +2
Query: 401 KIFVHGLGWDTKTETPIEAFKQYGEIEDCKAVFDKVSGKSKGYGFILFK 547
K+FV GL W T ET F QYGE+ DC + DK + +S+G+GF+ FK
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFK 59
>sp|Q9JII5|DAZP1_MOUSE DAZ-associated protein 1 OS=Mus musculus GN=Dazap1 PE=2
SV=2
Length = 406
Score = 55 bits (132), Expect = 9e-007
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +2
Query: 401 KIFVHGLGWDTKTETPIEAFKQYGEIEDCKAVFDKVSGKSKGYGFILFK 547
K+FV GL W T ET F QYGE+ DC + DK + +S+G+GF+ FK
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFK 59
>sp|Q98SJ2|DAZP1_XENLA DAZ-associated protein 1 OS=Xenopus laevis GN=dazap1 PE=1
SV=1
Length = 360
Score = 55 bits (132), Expect = 9e-007
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +2
Query: 401 KIFVHGLGWDTKTETPIEAFKQYGEIEDCKAVFDKVSGKSKGYGFILFK 547
K+FV GL W T ET F QYGE+ DC + DK + +S+G+GF+ FK
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFK 59
>sp|Q9EPQ2|RPGR1_MOUSE X-linked retinitis pigmentosa GTPase
regulator-interacting protein 1 OS=Mus musculus GN=Rpgrip1 PE=1 SV=1
Length = 1331
Score = 55 bits (132), Expect = 9e-007
Identities = 28/67 (41%), Positives = 41/67 (61%)
Frame = +1
Query: 85 EAQLAEASSEPSSQKQIATNNNQLNQKEKEVEYEEVEEEHEEEVEEDENDDDEEEEEDDN 264
E + E E +K+ + ++EKE E EE EEE E+E EE+E +++EEEEED+N
Sbjct: 929 EEEEEEEEEEVKEEKEEEEEEEREEEEEKEEEKEEEEEEDEKEEEEEEEEEEEEEEEDEN 988
Query: 265 RMVAAAS 285
+ V AS
Sbjct: 989 KDVLEAS 995
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,099,029,888
Number of Sequences: 518415
Number of Extensions: 26099029888
Number of Successful Extensions: 175876120
Number of sequences better than 0.0: 0
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