BLASTX 7.6.2
Query= UN06320 /QuerySize=1470
(1469 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G56860.3 | Symbols: UBA2A | UBP1 interacting p... 539 2e-153
TAIR9_protein||AT3G56860.1 | Symbols: UBA2A | UBP1 interacting p... 539 2e-153
TAIR9_protein||AT3G56860.2 | Symbols: UBA2A | UBP1 interacting p... 539 2e-153
TAIR9_protein||AT2G41060.1 | Symbols: | RNA recognition motif (... 428 8e-120
TAIR9_protein||AT2G41060.2 | Symbols: | RNA recognition motif (... 428 8e-120
TAIR9_protein||AT2G22090.2 | Symbols: UBA1A | UBP1 interacting p... 121 2e-027
TAIR9_protein||AT2G22090.1 | Symbols: UBA1A | UBP1 interacting p... 121 2e-027
TAIR9_protein||AT2G19380.1 | Symbols: | RNA recognition motif (... 114 2e-025
TAIR9_protein||AT3G15010.1 | Symbols: | RNA recognition motif (... 107 3e-023
TAIR9_protein||AT3G15010.2 | Symbols: | RNA recognition motif (... 107 3e-023
TAIR9_protein||AT2G22100.1 | Symbols: | RNA recognition motif (... 97 3e-020
TAIR9_protein||AT1G76460.1 | Symbols: | RNA recognition motif (... 77 3e-014
TAIR9_protein||AT1G22330.1 | Symbols: | RNA binding / nucleic a... 75 1e-013
>TAIR9_protein||AT3G56860.3 | Symbols: UBA2A | UBP1 interacting protein 2a
(UBA2a) | chr3:21050708-21052144 REVERSE
Length = 479
Score = 539 bits (1387), Expect = 2e-153
Identities = 273/321 (85%), Positives = 290/321 (90%), Gaps = 11/321 (3%)
Frame = +2
Query: 350 DVASRIREVADEDPVHRKIFVHGLGWDTKTETPIEAFKQYGEIEDCKAVFDKVSGKSKGY 529
DVA+RIREVADEDPVHRKIFVHGLGWDTKTET IEAFKQYGEIEDCKAVFDK+SGKSKGY
Sbjct: 124 DVANRIREVADEDPVHRKIFVHGLGWDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGY 183
Query: 530 GFILFKSRSGARHALKQPQKKIGSRMTACQLASKGPVFGGSNPVAASSGASIAPAQHSNS 709
GFIL+KSRSGAR+ALKQPQKKIGSRMTACQLASKGPVFGG+ P+AA+ A APAQHSNS
Sbjct: 184 GFILYKSRSGARNALKQPQKKIGSRMTACQLASKGPVFGGA-PIAAA--AVSAPAQHSNS 240
Query: 710 EHTQKKIYVINVGAELDLQKLLAFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSAESAK 889
EHTQKKIYV NVGAELD QKLL FFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKS+ESAK
Sbjct: 241 EHTQKKIYVSNVGAELDPQKLLMFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSSESAK 300
Query: 890 RALEEPHKTFEGHVLHCQKAIDGPKPGKQQQQFN-----SNPRFPRNDNNGGYGTPTGHG 1054
RALEEPHKTFEGH+LHCQKAIDGPKPGKQQQ + +NPR+ RNDNN GYG P GHG
Sbjct: 301 RALEEPHKTFEGHILHCQKAIDGPKPGKQQQHHHNPHAYNNPRYQRNDNN-GYGPPGGHG 359
Query: 1055 HLMAGNQGGMGTP-VQAMNPAFGQALTALLATQG-GLAFNPALGQALLGSLGTAAGVNPG 1228
HLMAGN GMG P Q +NPA GQALTALLA+QG GLAFNPA+GQALLGSLGTAAGVNPG
Sbjct: 360 HLMAGNPAGMGGPTAQVINPAIGQALTALLASQGAGLAFNPAIGQALLGSLGTAAGVNPG 419
Query: 1229 AGVGMPTGYGTQPMTPGSIPG 1291
GVGMPTGYGTQ M PG++PG
Sbjct: 420 NGVGMPTGYGTQAMAPGTMPG 440
Score = 85 bits (208), Expect = 1e-016
Identities = 46/82 (56%), Positives = 58/82 (70%), Gaps = 6/82 (7%)
Frame = +1
Query: 115 PSSQKQIATNNNQLNQKEKEVEYEEVEEEHEEEVEEDENDDDEEEEEDD---NRMVAAA- 282
P ++Q+ N +EVEYEEVEEE EEEVE+D+++DD +E ED NR+ AAA
Sbjct: 26 PEEEQQLVIKNQDNQGDVEEVEYEEVEEEQEEEVEDDDDEDDGDENEDQTDGNRIEAAAT 85
Query: 283 SGSGNHQGDDDDEEPIQDLLEP 348
SGSGN +DDD+EPIQDLLEP
Sbjct: 86 SGSGNQ--EDDDDEPIQDLLEP 105
>TAIR9_protein||AT3G56860.1 | Symbols: UBA2A | UBP1 interacting protein 2a
(UBA2a) | chr3:21050708-21052144 REVERSE
Length = 479
Score = 539 bits (1387), Expect = 2e-153
Identities = 273/321 (85%), Positives = 290/321 (90%), Gaps = 11/321 (3%)
Frame = +2
Query: 350 DVASRIREVADEDPVHRKIFVHGLGWDTKTETPIEAFKQYGEIEDCKAVFDKVSGKSKGY 529
DVA+RIREVADEDPVHRKIFVHGLGWDTKTET IEAFKQYGEIEDCKAVFDK+SGKSKGY
Sbjct: 124 DVANRIREVADEDPVHRKIFVHGLGWDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGY 183
Query: 530 GFILFKSRSGARHALKQPQKKIGSRMTACQLASKGPVFGGSNPVAASSGASIAPAQHSNS 709
GFIL+KSRSGAR+ALKQPQKKIGSRMTACQLASKGPVFGG+ P+AA+ A APAQHSNS
Sbjct: 184 GFILYKSRSGARNALKQPQKKIGSRMTACQLASKGPVFGGA-PIAAA--AVSAPAQHSNS 240
Query: 710 EHTQKKIYVINVGAELDLQKLLAFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSAESAK 889
EHTQKKIYV NVGAELD QKLL FFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKS+ESAK
Sbjct: 241 EHTQKKIYVSNVGAELDPQKLLMFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSSESAK 300
Query: 890 RALEEPHKTFEGHVLHCQKAIDGPKPGKQQQQFN-----SNPRFPRNDNNGGYGTPTGHG 1054
RALEEPHKTFEGH+LHCQKAIDGPKPGKQQQ + +NPR+ RNDNN GYG P GHG
Sbjct: 301 RALEEPHKTFEGHILHCQKAIDGPKPGKQQQHHHNPHAYNNPRYQRNDNN-GYGPPGGHG 359
Query: 1055 HLMAGNQGGMGTP-VQAMNPAFGQALTALLATQG-GLAFNPALGQALLGSLGTAAGVNPG 1228
HLMAGN GMG P Q +NPA GQALTALLA+QG GLAFNPA+GQALLGSLGTAAGVNPG
Sbjct: 360 HLMAGNPAGMGGPTAQVINPAIGQALTALLASQGAGLAFNPAIGQALLGSLGTAAGVNPG 419
Query: 1229 AGVGMPTGYGTQPMTPGSIPG 1291
GVGMPTGYGTQ M PG++PG
Sbjct: 420 NGVGMPTGYGTQAMAPGTMPG 440
Score = 85 bits (208), Expect = 1e-016
Identities = 46/82 (56%), Positives = 58/82 (70%), Gaps = 6/82 (7%)
Frame = +1
Query: 115 PSSQKQIATNNNQLNQKEKEVEYEEVEEEHEEEVEEDENDDDEEEEEDD---NRMVAAA- 282
P ++Q+ N +EVEYEEVEEE EEEVE+D+++DD +E ED NR+ AAA
Sbjct: 26 PEEEQQLVIKNQDNQGDVEEVEYEEVEEEQEEEVEDDDDEDDGDENEDQTDGNRIEAAAT 85
Query: 283 SGSGNHQGDDDDEEPIQDLLEP 348
SGSGN +DDD+EPIQDLLEP
Sbjct: 86 SGSGNQ--EDDDDEPIQDLLEP 105
>TAIR9_protein||AT3G56860.2 | Symbols: UBA2A | UBP1 interacting protein 2a
(UBA2a) | chr3:21050708-21052144 REVERSE
Length = 479
Score = 539 bits (1387), Expect = 2e-153
Identities = 273/321 (85%), Positives = 290/321 (90%), Gaps = 11/321 (3%)
Frame = +2
Query: 350 DVASRIREVADEDPVHRKIFVHGLGWDTKTETPIEAFKQYGEIEDCKAVFDKVSGKSKGY 529
DVA+RIREVADEDPVHRKIFVHGLGWDTKTET IEAFKQYGEIEDCKAVFDK+SGKSKGY
Sbjct: 124 DVANRIREVADEDPVHRKIFVHGLGWDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGY 183
Query: 530 GFILFKSRSGARHALKQPQKKIGSRMTACQLASKGPVFGGSNPVAASSGASIAPAQHSNS 709
GFIL+KSRSGAR+ALKQPQKKIGSRMTACQLASKGPVFGG+ P+AA+ A APAQHSNS
Sbjct: 184 GFILYKSRSGARNALKQPQKKIGSRMTACQLASKGPVFGGA-PIAAA--AVSAPAQHSNS 240
Query: 710 EHTQKKIYVINVGAELDLQKLLAFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSAESAK 889
EHTQKKIYV NVGAELD QKLL FFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKS+ESAK
Sbjct: 241 EHTQKKIYVSNVGAELDPQKLLMFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSSESAK 300
Query: 890 RALEEPHKTFEGHVLHCQKAIDGPKPGKQQQQFN-----SNPRFPRNDNNGGYGTPTGHG 1054
RALEEPHKTFEGH+LHCQKAIDGPKPGKQQQ + +NPR+ RNDNN GYG P GHG
Sbjct: 301 RALEEPHKTFEGHILHCQKAIDGPKPGKQQQHHHNPHAYNNPRYQRNDNN-GYGPPGGHG 359
Query: 1055 HLMAGNQGGMGTP-VQAMNPAFGQALTALLATQG-GLAFNPALGQALLGSLGTAAGVNPG 1228
HLMAGN GMG P Q +NPA GQALTALLA+QG GLAFNPA+GQALLGSLGTAAGVNPG
Sbjct: 360 HLMAGNPAGMGGPTAQVINPAIGQALTALLASQGAGLAFNPAIGQALLGSLGTAAGVNPG 419
Query: 1229 AGVGMPTGYGTQPMTPGSIPG 1291
GVGMPTGYGTQ M PG++PG
Sbjct: 420 NGVGMPTGYGTQAMAPGTMPG 440
Score = 85 bits (208), Expect = 1e-016
Identities = 46/82 (56%), Positives = 58/82 (70%), Gaps = 6/82 (7%)
Frame = +1
Query: 115 PSSQKQIATNNNQLNQKEKEVEYEEVEEEHEEEVEEDENDDDEEEEEDD---NRMVAAA- 282
P ++Q+ N +EVEYEEVEEE EEEVE+D+++DD +E ED NR+ AAA
Sbjct: 26 PEEEQQLVIKNQDNQGDVEEVEYEEVEEEQEEEVEDDDDEDDGDENEDQTDGNRIEAAAT 85
Query: 283 SGSGNHQGDDDDEEPIQDLLEP 348
SGSGN +DDD+EPIQDLLEP
Sbjct: 86 SGSGNQ--EDDDDEPIQDLLEP 105
>TAIR9_protein||AT2G41060.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr2:17127138-17128493 FORWARD
Length = 452
Score = 428 bits (1098), Expect = 8e-120
Identities = 230/321 (71%), Positives = 253/321 (78%), Gaps = 23/321 (7%)
Frame = +2
Query: 347 RDVASRIREVADEDPVHRKIFVHGLGWDTKTETPIEAFKQYGEIEDCKAVFDKVSGKSKG 526
RDVA+RIR VADED VHRKIFVHGLGWDTK ++ I+AFKQYGEIEDCK V DKVSG+SKG
Sbjct: 111 RDVANRIRIVADEDLVHRKIFVHGLGWDTKADSLIDAFKQYGEIEDCKCVVDKVSGQSKG 170
Query: 527 YGFILFKSRSGARHALKQPQKKIGSRMTACQLASKGPVFGGSNPVAASSGASIAPAQHSN 706
YGFILFKSRSGAR+ALKQPQKKIG+RMTACQLAS GPV G NPV +APAQH N
Sbjct: 171 YGFILFKSRSGARNALKQPQKKIGTRMTACQLASIGPVQG--NPV-------VAPAQHFN 221
Query: 707 SEHTQKKIYVINVGAELDLQKLLAFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSAESA 886
E+ Q+KIYV NV A++D QKLL FFS+FGEIEEGPLGLDK TGRPKGF LFVY+S ESA
Sbjct: 222 PENVQRKIYVSNVSADIDPQKLLEFFSRFGEIEEGPLGLDKATGRPKGFALFVYRSLESA 281
Query: 887 KRALEEPHKTFEGHVLHCQKAIDGPKPGKQQQ----QFNSNPRFPRNDNNGGYGTPTGHG 1054
K+ALEEPHKTFEGHVLHC KA DGPK KQ Q N N R+ RNDNN GYG P GHG
Sbjct: 282 KKALEEPHKTFEGHVLHCHKANDGPKQVKQHQHNHNSHNQNSRYQRNDNN-GYGAPGGHG 340
Query: 1055 HLMAGNQGGMGTPVQAMNPAFGQALTALLATQG-GLAFNPALGQALLGSLGTAAGVNPGA 1231
H +AGN VQA NPA GQALTALLA+QG GL N A GQALLG+LGTA +PGA
Sbjct: 341 HFIAGN----NQAVQAFNPAIGQALTALLASQGAGLGLNQAFGQALLGTLGTA---SPGA 393
Query: 1232 GVGMPTGYGTQP-MTPGSIPG 1291
GMP+GYGTQ ++PG PG
Sbjct: 394 VGGMPSGYGTQANISPGVYPG 414
>TAIR9_protein||AT2G41060.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr2:17127138-17128493 FORWARD
Length = 452
Score = 428 bits (1098), Expect = 8e-120
Identities = 230/321 (71%), Positives = 253/321 (78%), Gaps = 23/321 (7%)
Frame = +2
Query: 347 RDVASRIREVADEDPVHRKIFVHGLGWDTKTETPIEAFKQYGEIEDCKAVFDKVSGKSKG 526
RDVA+RIR VADED VHRKIFVHGLGWDTK ++ I+AFKQYGEIEDCK V DKVSG+SKG
Sbjct: 111 RDVANRIRIVADEDLVHRKIFVHGLGWDTKADSLIDAFKQYGEIEDCKCVVDKVSGQSKG 170
Query: 527 YGFILFKSRSGARHALKQPQKKIGSRMTACQLASKGPVFGGSNPVAASSGASIAPAQHSN 706
YGFILFKSRSGAR+ALKQPQKKIG+RMTACQLAS GPV G NPV +APAQH N
Sbjct: 171 YGFILFKSRSGARNALKQPQKKIGTRMTACQLASIGPVQG--NPV-------VAPAQHFN 221
Query: 707 SEHTQKKIYVINVGAELDLQKLLAFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSAESA 886
E+ Q+KIYV NV A++D QKLL FFS+FGEIEEGPLGLDK TGRPKGF LFVY+S ESA
Sbjct: 222 PENVQRKIYVSNVSADIDPQKLLEFFSRFGEIEEGPLGLDKATGRPKGFALFVYRSLESA 281
Query: 887 KRALEEPHKTFEGHVLHCQKAIDGPKPGKQQQ----QFNSNPRFPRNDNNGGYGTPTGHG 1054
K+ALEEPHKTFEGHVLHC KA DGPK KQ Q N N R+ RNDNN GYG P GHG
Sbjct: 282 KKALEEPHKTFEGHVLHCHKANDGPKQVKQHQHNHNSHNQNSRYQRNDNN-GYGAPGGHG 340
Query: 1055 HLMAGNQGGMGTPVQAMNPAFGQALTALLATQG-GLAFNPALGQALLGSLGTAAGVNPGA 1231
H +AGN VQA NPA GQALTALLA+QG GL N A GQALLG+LGTA +PGA
Sbjct: 341 HFIAGN----NQAVQAFNPAIGQALTALLASQGAGLGLNQAFGQALLGTLGTA---SPGA 393
Query: 1232 GVGMPTGYGTQP-MTPGSIPG 1291
GMP+GYGTQ ++PG PG
Sbjct: 394 VGGMPSGYGTQANISPGVYPG 414
>TAIR9_protein||AT2G22090.2 | Symbols: UBA1A | UBP1 interacting protein 1a
(UBA1a) | chr2:9389407-9390450 REVERSE
Length = 348
Score = 121 bits (301), Expect = 2e-027
Identities = 60/128 (46%), Positives = 80/128 (62%), Gaps = 8/128 (6%)
Frame = +2
Query: 353 VASRIREVADEDPVHRKIFVHGLGWDTKTETPIEAFKQYGEIEDCKAVFDKVSGKSKGYG 532
+ S + E AD D HRKIFV+GL W+T ET + F+ YGEIE+C V DK +GK+KG+G
Sbjct: 89 IYSAVVEAADRDVTHRKIFVYGLPWETTRETLVGVFEGYGEIEECTVVIDKATGKAKGFG 148
Query: 533 FILFKSRSGARHALKQPQKKIGSRMTACQLASKGPVFGGS-----NPVAASSGASIAPAQ 697
F++FK+R GA+ ALK+P+K+I +R CQLAS GP G PV S G+ A
Sbjct: 149 FVMFKTRKGAKEALKEPKKRILNRTATCQLASMGPAASGKGHDQPGPVKISMGSM---AN 205
Query: 698 HSNSEHTQ 721
H + Q
Sbjct: 206 HGQPQQQQ 213
>TAIR9_protein||AT2G22090.1 | Symbols: UBA1A | UBP1 interacting protein 1a
(UBA1a) | chr2:9388571-9390450 REVERSE
Length = 344
Score = 121 bits (301), Expect = 2e-027
Identities = 60/128 (46%), Positives = 80/128 (62%), Gaps = 8/128 (6%)
Frame = +2
Query: 353 VASRIREVADEDPVHRKIFVHGLGWDTKTETPIEAFKQYGEIEDCKAVFDKVSGKSKGYG 532
+ S + E AD D HRKIFV+GL W+T ET + F+ YGEIE+C V DK +GK+KG+G
Sbjct: 89 IYSAVVEAADRDVTHRKIFVYGLPWETTRETLVGVFEGYGEIEECTVVIDKATGKAKGFG 148
Query: 533 FILFKSRSGARHALKQPQKKIGSRMTACQLASKGPVFGGS-----NPVAASSGASIAPAQ 697
F++FK+R GA+ ALK+P+K+I +R CQLAS GP G PV S G+ A
Sbjct: 149 FVMFKTRKGAKEALKEPKKRILNRTATCQLASMGPAASGKGHDQPGPVKISMGSM---AN 205
Query: 698 HSNSEHTQ 721
H + Q
Sbjct: 206 HGQPQQQQ 213
>TAIR9_protein||AT2G19380.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr2:8383856-8386604 FORWARD
Length = 614
Score = 114 bits (284), Expect = 2e-025
Identities = 63/160 (39%), Positives = 91/160 (56%), Gaps = 9/160 (5%)
Frame = +2
Query: 161 RKRKK*NTRK*RKSTRRKSKRTKTMMTKKKK-KMTIVWWRRRRDLGIIKEMTTTRSRFKI 337
+K KK + K RK ++++K K+ K +V + + + +I + SR
Sbjct: 336 KKAKKQDKEKKRKKDKKQTKSDSDFEHDKEDIKQLLVAYSKEELVNLIYKTAEKGSR--- 392
Query: 338 CWSRDVASRIREVADEDPVHRKIFVHGLGWDTKTETPIEAFKQYGEIEDCKAVFDKVSGK 517
+ S I E AD D R IFV G GWDT E AF+ YGEIE+C V DK +G+
Sbjct: 393 -----LISAILESADRDIAQRNIFVRGFGWDTTQENLKTAFESYGEIEECSVVMDKDTGR 447
Query: 518 SKGYGFILFKSRSGARHALKQPQKKIGSRMTACQLASKGP 637
KGYGF++FK+R GAR ALK+P+K++ +R+ C LAS+ P
Sbjct: 448 GKGYGFVMFKTRKGAREALKRPEKRMYNRIVVCNLASEKP 487
>TAIR9_protein||AT3G15010.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:5052844-5054058 FORWARD
Length = 405
Score = 107 bits (265), Expect = 3e-023
Identities = 73/201 (36%), Positives = 97/201 (48%), Gaps = 17/201 (8%)
Frame = +2
Query: 716 TQKKIYVINVGAELDLQKLLAFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSAESAKRA 895
+ +KIYV NV ++ +LL F +G++EEGPLG DK TG+ +GF LFVYK+AE A+ A
Sbjct: 165 SMRKIYVANVPFDMPADRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAA 224
Query: 896 LEEPHKTFEGHVLHCQKAIDGPKPGKQQQQFNSNPRFPR-NDNNGGYGTPTGHGHLM--- 1063
L +P K +G L+C+ A+DG K GK P P+ D G+G G G M
Sbjct: 225 LADPVKVIDGKHLNCKLAVDGKKGGK--------PGMPQAQDGGSGHGHVHGEGMGMVRP 276
Query: 1064 AGNQGGMGTPVQAMNPAFGQALTALLATQGGLAFNPALGQALLGSLGTAAGVNP----GA 1231
AG G G + G + +T + A G G G G
Sbjct: 277 AGPYGAAGGISAYGGYSGGPPAHHMNSTHSSMGVGSAGYGGHYGGYGGPGGTGVYGGLGG 336
Query: 1232 GVGMP-TGYGTQPMTPGSIPG 1291
G G P TG G M P S+PG
Sbjct: 337 GYGGPGTGSGQYRMPPSSMPG 357
Score = 92 bits (228), Expect = 6e-019
Identities = 48/101 (47%), Positives = 60/101 (59%)
Frame = +2
Query: 350 DVASRIREVADEDPVHRKIFVHGLGWDTKTETPIEAFKQYGEIEDCKAVFDKVSGKSKGY 529
DV +R AD D RK+F+ GL DT TE F YG++E+ + DKV+GKSKGY
Sbjct: 59 DVLESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGY 118
Query: 530 GFILFKSRSGARHALKQPQKKIGSRMTACQLASKGPVFGGS 652
GF+ F GA ALK+P KKI R+T QLA+ G GS
Sbjct: 119 GFVTFMHVDGALLALKEPSKKIDGRVTVTQLAASGNQGTGS 159
>TAIR9_protein||AT3G15010.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:5052844-5054058 FORWARD
Length = 405
Score = 107 bits (265), Expect = 3e-023
Identities = 73/201 (36%), Positives = 97/201 (48%), Gaps = 17/201 (8%)
Frame = +2
Query: 716 TQKKIYVINVGAELDLQKLLAFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSAESAKRA 895
+ +KIYV NV ++ +LL F +G++EEGPLG DK TG+ +GF LFVYK+AE A+ A
Sbjct: 165 SMRKIYVANVPFDMPADRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAA 224
Query: 896 LEEPHKTFEGHVLHCQKAIDGPKPGKQQQQFNSNPRFPR-NDNNGGYGTPTGHGHLM--- 1063
L +P K +G L+C+ A+DG K GK P P+ D G+G G G M
Sbjct: 225 LADPVKVIDGKHLNCKLAVDGKKGGK--------PGMPQAQDGGSGHGHVHGEGMGMVRP 276
Query: 1064 AGNQGGMGTPVQAMNPAFGQALTALLATQGGLAFNPALGQALLGSLGTAAGVNP----GA 1231
AG G G + G + +T + A G G G G
Sbjct: 277 AGPYGAAGGISAYGGYSGGPPAHHMNSTHSSMGVGSAGYGGHYGGYGGPGGTGVYGGLGG 336
Query: 1232 GVGMP-TGYGTQPMTPGSIPG 1291
G G P TG G M P S+PG
Sbjct: 337 GYGGPGTGSGQYRMPPSSMPG 357
Score = 92 bits (228), Expect = 6e-019
Identities = 48/101 (47%), Positives = 60/101 (59%)
Frame = +2
Query: 350 DVASRIREVADEDPVHRKIFVHGLGWDTKTETPIEAFKQYGEIEDCKAVFDKVSGKSKGY 529
DV +R AD D RK+F+ GL DT TE F YG++E+ + DKV+GKSKGY
Sbjct: 59 DVLESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGY 118
Query: 530 GFILFKSRSGARHALKQPQKKIGSRMTACQLASKGPVFGGS 652
GF+ F GA ALK+P KKI R+T QLA+ G GS
Sbjct: 119 GFVTFMHVDGALLALKEPSKKIDGRVTVTQLAASGNQGTGS 159
>TAIR9_protein||AT2G22100.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr2:9392397-9393545 REVERSE
Length = 383
Score = 97 bits (239), Expect = 3e-020
Identities = 45/86 (52%), Positives = 59/86 (68%)
Frame = +2
Query: 359 SRIREVADEDPVHRKIFVHGLGWDTKTETPIEAFKQYGEIEDCKAVFDKVSGKSKGYGFI 538
S + E AD D R IFV GLGWDT E AF+ YGEI +C V DK +G++KG+GF+
Sbjct: 150 SAVFESADRDSSQRNIFVRGLGWDTTHENLKAAFEVYGEITECSVVMDKDTGRAKGFGFV 209
Query: 539 LFKSRSGARHALKQPQKKIGSRMTAC 616
LFK+R GAR ALK P+K++ +R +C
Sbjct: 210 LFKTRKGARAALKNPEKRMYNRTVSC 235
>TAIR9_protein||AT1G76460.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:28686932-28688506 REVERSE
Length = 286
Score = 77 bits (187), Expect = 3e-014
Identities = 37/83 (44%), Positives = 49/83 (59%)
Frame = +2
Query: 386 DPVHRKIFVHGLGWDTKTETPIEAFKQYGEIEDCKAVFDKVSGKSKGYGFILFKSRSGAR 565
D K+FV GL W+T++ET + F+QYGEI + + DK +G+SKGYGF+ F+ AR
Sbjct: 20 DTTFTKVFVGGLAWETQSETLRQHFEQYGEILEAVVIADKNTGRSKGYGFVTFRDPEAAR 79
Query: 566 HALKQPQKKIGSRMTACQLASKG 634
A P I R C LAS G
Sbjct: 80 RACADPTPIIDGRRANCNLASLG 102
>TAIR9_protein||AT1G22330.1 | Symbols: | RNA binding / nucleic acid binding /
nucleotide binding | chr1:7886693-7889241 FORWARD
Length = 292
Score = 75 bits (183), Expect = 1e-013
Identities = 35/83 (42%), Positives = 46/83 (55%)
Frame = +2
Query: 386 DPVHRKIFVHGLGWDTKTETPIEAFKQYGEIEDCKAVFDKVSGKSKGYGFILFKSRSGAR 565
D H K+FV GL W+T T+ F Q+GEI + + DK +GKSKGYGF+ F+ A
Sbjct: 13 DTTHTKVFVGGLAWETPTDEMRRYFDQFGEILEAVIITDKATGKSKGYGFVTFRDSDSAT 72
Query: 566 HALKQPQKKIGSRMTACQLASKG 634
A+ P I R C +AS G
Sbjct: 73 RAVADPNPVIDGRKANCNIASFG 95
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,865,654,250
Number of Sequences: 33410
Number of Extensions: 3865654250
Number of Successful Extensions: 147658413
Number of sequences better than 0.0: 0
|
