Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN06321


BLASTX 7.6.2

Query= UN06321 /QuerySize=739
        (738 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT1G15270.1 | Symbols:  | FUNCTIONS IN: molecular...     77   1e-014
TAIR9_protein||AT3G16040.1 | Symbols:  | FUNCTIONS IN: molecular...     73   2e-013

>TAIR9_protein||AT1G15270.1 | Symbols:  | FUNCTIONS IN: molecular_function
        unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma
        membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
        growth stages; CONTAINS InterPro DOMAIN/s: Translation machinery
        associated TMA7 (InterPro:IPR015157); BEST Arabidopsis thaliana protein
        match is: unknown protein (TAIR:AT3G16040.1); Has 263 Blast hits to 263
        proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi
        - 48; Plants - 41; Viruses - 0; Other Eukaryotes - 21 (source: NCBI
        BLink). | chr1:5250833-5252020 REVERSE

          Length = 65

 Score =  77 bits (188), Expect = 1e-014
 Identities = 37/40 (92%), Positives = 39/40 (97%)
 Frame = +2

Query: 482 DMANLQKKKDEEKALKELRAKASQKGSFGGSGLKKSGKK* 601
           D+AN+QKKKDEEKALKELRAKASQKGSFGGSGLKKSGKK*
Sbjct:  26 DLANIQKKKDEEKALKELRAKASQKGSFGGSGLKKSGKK* 65


 Score =  57 bits (137), Expect = 8e-009
 Identities = 27/41 (65%), Positives = 32/41 (78%)
 Frame = +3

Query: 408 MSSKQGGKAKPLKQPKADKKEYDEPIWPTFRRRKTRKRHLK 530
           MSSKQGGKAKPLKQPKADKKEYDE      +++K  ++ LK
Sbjct:   1 MSSKQGGKAKPLKQPKADKKEYDETDLANIQKKKDEEKALK 41

>TAIR9_protein||AT3G16040.1 | Symbols:  | FUNCTIONS IN: molecular_function
        unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
        cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED
        DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C
        globular stage, petal differentiation and expansion stage; CONTAINS
        InterPro DOMAIN/s: Translation machinery associated TMA7
        (InterPro:IPR015157); BEST Arabidopsis thaliana protein match is:
        unknown protein (TAIR:AT1G15270.1); Has 264 Blast hits to 264 proteins
        in 91 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 48;
        Plants - 41; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). |
        chr3:5443202-5443810 FORWARD

          Length = 65

 Score =  73 bits (177), Expect = 2e-013
 Identities = 36/40 (90%), Positives = 37/40 (92%)
 Frame = +2

Query: 482 DMANLQKKKDEEKALKELRAKASQKGSFGGSGLKKSGKK* 601
           DM  +QKKKDEEKALKELRAKASQKGSFGGSGLKKSGKK*
Sbjct:  26 DMELMQKKKDEEKALKELRAKASQKGSFGGSGLKKSGKK* 65


 Score =  51 bits (121), Expect = 6e-007
 Identities = 24/41 (58%), Positives = 30/41 (73%)
 Frame = +3

Query: 408 MSSKQGGKAKPLKQPKADKKEYDEPIWPTFRRRKTRKRHLK 530
           MSSKQGGK KPLKQPK+ KKEYDE      +++K  ++ LK
Sbjct:   1 MSSKQGGKLKPLKQPKSGKKEYDEHDMELMQKKKDEEKALK 41

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,865,654,250
Number of Sequences: 33410
Number of Extensions: 3865654250
Number of Successful Extensions: 147658413
Number of sequences better than 0.0: 0