Library    |     Search    |     Batch query    |     SNP    |     SSR  

SwissProt blast output of UN06347


BLASTX 7.6.2

Query= UN06347 /QuerySize=667
        (666 letters)

Database: UniProt/SwissProt;
          518,415 sequences; 182,829,261 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|Q9SD88|U139_ARATH UPF0139 membrane protein At5g07960 OS=Arabi...    143   2e-033

>sp|Q9SD88|U139_ARATH UPF0139 membrane protein At5g07960 OS=Arabidopsis thaliana
        GN=At5g07960 PE=2 SV=1

          Length = 107

 Score =  143 bits (358), Expect = 2e-033
 Identities = 66/71 (92%), Positives = 68/71 (95%)
 Frame = +3

Query:  57 MSHSHGNAPSANDPRQPSAAKPYTPRPIAPEDLPVDYSGFIAVILGVSGVMFRYKICSWL 236
           MSHSHGNA S NDPRQPSAAKPY PRP+APEDLPVDYSGFIAVILGVSGVMFRYKICSWL
Sbjct:   1 MSHSHGNASSVNDPRQPSAAKPYIPRPVAPEDLPVDYSGFIAVILGVSGVMFRYKICSWL 60

Query: 237 ALIFCAQSLAN 269
           A+IFCAQSLAN
Sbjct:  61 AIIFCAQSLAN 71


 Score =  73 bits (177), Expect = 2e-012
 Identities = 35/36 (97%)
 Frame = +1

Query: 268 MRNLETDLKQISMAMMFAIMGLVTNYLGPNRPATKK 375
           MRNLE DLKQISMAMMFAIMGLVTNYLGPNRPATKK
Sbjct:  72 MRNLENDLKQISMAMMFAIMGLVTNYLGPNRPATKK 107

  Database: UniProt/SwissProt
    Posted date:  Sat Aug 07 14:36:18 2010
  Number of letters in database: 182,829,261
  Number of sequences in database:  518,415

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,099,029,888
Number of Sequences: 518415
Number of Extensions: 26099029888
Number of Successful Extensions: 175876120
Number of sequences better than 0.0: 0