BLASTX 7.6.2
Query= UN06353 /QuerySize=955
(954 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G25150.1 | Symbols: | nuclear transport facto... 324 9e-089
TAIR9_protein||AT5G60980.1 | Symbols: | nuclear transport facto... 148 7e-036
TAIR9_protein||AT5G60980.2 | Symbols: | nuclear transport facto... 148 7e-036
TAIR9_protein||AT5G48650.1 | Symbols: | nuclear transport facto... 127 9e-030
TAIR9_protein||AT1G13730.1 | Symbols: | nuclear transport facto... 115 5e-026
TAIR9_protein||AT2G03640.2 | Symbols: | nuclear transport facto... 104 8e-023
TAIR9_protein||AT2G03640.1 | Symbols: | nuclear transport facto... 102 3e-022
TAIR9_protein||AT5G43960.1 | Symbols: | nuclear transport facto... 97 2e-020
TAIR9_protein||AT1G69250.2 | Symbols: | nuclear transport facto... 95 7e-020
TAIR9_protein||AT1G69250.1 | Symbols: | nuclear transport facto... 95 7e-020
TAIR9_protein||AT3G07250.1 | Symbols: | nuclear transport facto... 92 6e-019
TAIR9_protein||AT5G43960.2 | Symbols: | nuclear transport facto... 72 6e-013
>TAIR9_protein||AT3G25150.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr3:9157161-9159362 REVERSE
Length = 489
Score = 324 bits (828), Expect = 9e-089
Identities = 166/232 (71%), Positives = 193/232 (83%), Gaps = 12/232 (5%)
Frame = +1
Query: 187 MAMLGAQQVQTAACTPDLVGNAFVHQYYHILHHSPQHVHRFYQDISKLGRPEDNNGTMSI 366
MAMLGAQQV AACTPD+VGNAFV QYYHILH SP+HVHRFYQ+ISKLGRPE+ NG MSI
Sbjct: 1 MAMLGAQQVPAAACTPDMVGNAFVPQYYHILHQSPEHVHRFYQEISKLGRPEE-NGLMSI 59
Query: 367 TSTLQGIDKKILALGDGVIGAEIATVDTQDSYGGGFLLLVTGYLTGKDGVRRTFTQTFFL 546
TSTLQ IDKKI+ALG GVI AEIATVDTQ+S+GGG+++LVTGYLTGKD VRRTF+QTFFL
Sbjct: 60 TSTLQAIDKKIMALGYGVISAEIATVDTQESHGGGYIVLVTGYLTGKDSVRRTFSQTFFL 119
Query: 547 APQENGYFVLNDMFRYIDEATI-------VNNIQVPVNVHQDPPATQDIP---VQETYVQ 696
APQE GYFVLNDMFR+IDE T+ VNN+Q PVN +QD A ++IP VQE YVQ
Sbjct: 120 APQETGYFVLNDMFRFIDEGTVVHGNQIPVNNVQAPVNTYQDTAAAKEIPDDFVQEKYVQ 179
Query: 697 ENHAVEQSDVLSKSINGPE-VFAPTEEELISVTEDAPAPGIVHEAPIDVQKL 849
ENHAV+Q++VLSKSIN PE VF P+E+E +S E+A V+EAPI+VQK+
Sbjct: 180 ENHAVKQTEVLSKSINEPEKVFTPSEDEQVSAAEEALVTETVNEAPIEVQKV 231
>TAIR9_protein||AT5G60980.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr5:24543988-24546027 FORWARD
Length = 460
Score = 148 bits (372), Expect = 7e-036
Identities = 93/221 (42%), Positives = 128/221 (57%), Gaps = 19/221 (8%)
Frame = +1
Query: 202 AQQVQTAACTPDLVGNAFVHQYYHILHHSPQHVHRFYQDISKLGRPEDNNGTMSITSTLQ 381
AQQ + + ++VG AFV QYYHILH SP VHRFYQD S L RP D G ++ +T+Q
Sbjct: 2 AQQEASPSPGAEVVGRAFVEQYYHILHQSPGLVHRFYQDSSFLTRP-DVTGAVTTVTTMQ 60
Query: 382 GIDKKILALGDGVIGAEIATVDTQDSYGGGFLLLVTGYLTGKDGVRRTFTQTFFLAPQEN 561
I+ KIL+L AEI T D Q+S+ G ++LVTG LTG D VR+ F+Q+FFLAPQ+
Sbjct: 61 AINDKILSLKYEDYTAEIETADAQESHERGVIVLVTGRLTGNDNVRKKFSQSFFLAPQDK 120
Query: 562 GYFVLNDMFRYIDEATIVNNIQ-VPVNVHQDPPATQDI--PVQETYVQENHAVEQSDVLS 732
GYFVLND+FR+++E + + VP+N T+D+ P++ V +H E
Sbjct: 121 GYFVLNDVFRFLEEKEVTAQARSVPIN-----GTTRDVQAPIEPERVVVSHEPEVE---- 171
Query: 733 KSINGPEVFAPTEEELISVTEDAPAPGIVHE-APIDVQKLE 852
PE A EEE + + P E +DV+ +E
Sbjct: 172 -----PEPVASIEEEDLDNVAEVYDPSDKDEGVVVDVEPIE 207
>TAIR9_protein||AT5G60980.2 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr5:24543988-24546027 FORWARD
Length = 461
Score = 148 bits (372), Expect = 7e-036
Identities = 93/221 (42%), Positives = 128/221 (57%), Gaps = 19/221 (8%)
Frame = +1
Query: 202 AQQVQTAACTPDLVGNAFVHQYYHILHHSPQHVHRFYQDISKLGRPEDNNGTMSITSTLQ 381
AQQ + + ++VG AFV QYYHILH SP VHRFYQD S L RP D G ++ +T+Q
Sbjct: 2 AQQEASPSPGAEVVGRAFVEQYYHILHQSPGLVHRFYQDSSFLTRP-DVTGAVTTVTTMQ 60
Query: 382 GIDKKILALGDGVIGAEIATVDTQDSYGGGFLLLVTGYLTGKDGVRRTFTQTFFLAPQEN 561
I+ KIL+L AEI T D Q+S+ G ++LVTG LTG D VR+ F+Q+FFLAPQ+
Sbjct: 61 AINDKILSLKYEDYTAEIETADAQESHERGVIVLVTGRLTGNDNVRKKFSQSFFLAPQDK 120
Query: 562 GYFVLNDMFRYIDEATIVNNIQ-VPVNVHQDPPATQDI--PVQETYVQENHAVEQSDVLS 732
GYFVLND+FR+++E + + VP+N T+D+ P++ V +H E
Sbjct: 121 GYFVLNDVFRFLEEKEVTAQARSVPIN-----GTTRDVQAPIEPERVVVSHEPEVE---- 171
Query: 733 KSINGPEVFAPTEEELISVTEDAPAPGIVHE-APIDVQKLE 852
PE A EEE + + P E +DV+ +E
Sbjct: 172 -----PEPVASIEEEDLDNVAEVYDPSDKDEGVVVDVEPIE 207
>TAIR9_protein||AT5G48650.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr5:19727279-19729533 FORWARD
Length = 459
Score = 127 bits (319), Expect = 9e-030
Identities = 67/126 (53%), Positives = 90/126 (71%), Gaps = 4/126 (3%)
Frame = +1
Query: 232 PDLVGNAFVHQYYHILHHSPQHVHRFYQDISKLGRPEDNNGTMSITSTLQGIDKKI--LA 405
P VG+AFV+QYY+I + P+H+ RFYQ+IS++GR +G M ST QGI +++ L
Sbjct: 13 PLTVGSAFVNQYYYIFCNMPEHLPRFYQEISRVGR-VGQDGVMRDFSTFQGISEELKRLT 71
Query: 406 LGDGVIGAEIATVDTQDSYGGGFLLLVTGYLTGKDGVRRTFTQTFFLAPQENGYFVLNDM 585
GD AEI + DTQ+S+ GGFLL VTGY T + RR FTQTFFLAPQE G+FVLND+
Sbjct: 72 YGD-CNSAEITSYDTQESHNGGFLLFVTGYFTLNERSRRKFTQTFFLAPQEKGFFVLNDI 130
Query: 586 FRYIDE 603
R++++
Sbjct: 131 LRFVND 136
>TAIR9_protein||AT1G13730.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr1:4710519-4712332 FORWARD
Length = 429
Score = 115 bits (287), Expect = 5e-026
Identities = 65/178 (36%), Positives = 99/178 (55%), Gaps = 5/178 (2%)
Frame = +1
Query: 232 PDLVGNAFVHQYYHILHHSPQHVHRFYQDISKLGRPEDNNGTMSITSTLQGIDKKILALG 411
P+ +GN+FV +YY++L+ SP VH+FY D S LGRP ++G M +L+ I+++I++
Sbjct: 12 PNTIGNSFVEKYYNLLYKSPSQVHQFYLDDSVLGRP-GSDGEMVSVKSLKAINEQIMSFD 70
Query: 412 DGVIGAEIATVDTQDSYGGGFLLLVTGYLTGKDGVRRTFTQTFFLAPQENGYFVLNDMFR 591
+ +I T D+Q SY G + LVTG LT K+G R F+Q+FFL P YFVLND+FR
Sbjct: 71 YEISKIQILTADSQASYMNGVVTLVTGLLTVKEGQRMRFSQSFFLVPLNGSYFVLNDVFR 130
Query: 592 YIDEATI---VNNIQVPVNVHQDPPATQDI-PVQETYVQENHAVEQSDVLSKSINGPE 753
Y+ + + N +V + Q T+ + V E E ++ PE
Sbjct: 131 YVADEIVEPEANKKEVEEVIPQVVQPTEQVDEVAEPVTIPTQQPEAKQTTENTVKKPE 188
>TAIR9_protein||AT2G03640.2 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr2:1104525-1106418 REVERSE
Length = 424
Score = 104 bits (259), Expect = 8e-023
Identities = 66/194 (34%), Positives = 98/194 (50%), Gaps = 3/194 (1%)
Frame = +1
Query: 232 PDLVGNAFVHQYYHILHHSPQHVHRFYQDISKLGRPEDNNGTMSITSTLQGIDKKILALG 411
P VGN FV +YY+ L+ S VH+FY + S + RP + ++I S L+GI+ +I+++
Sbjct: 12 PQFVGNGFVQEYYNHLYDSTSEVHKFYLEDSMISRPGLDGEIVTIKS-LKGINDQIMSID 70
Query: 412 DGVIGAEIATVDTQDSYGGGFLLLVTGYLTGKDGVRRTFTQTFFLAPQENGYFVLNDMFR 591
EI T D+Q + G + LVTG + G DG RR F+Q+FFL + YFVLND FR
Sbjct: 71 YKSSRIEILTADSQSTLKNGVVTLVTGLVIGNDGGRRKFSQSFFLVSRNGSYFVLNDTFR 130
Query: 592 YIDEATIVNNIQVPVNVHQDPPATQDIPVQETYVQENHAVEQSDVLSKSING-PEVFAPT 768
Y+ + + V Q A P E+ E ++K + P A
Sbjct: 131 YVSDEFVEPEATKEVEESQSTNAITAEPANESVEAVIVPTEAKTTVTKPASAIPNGHAKV 190
Query: 769 EEELISVTEDAPAP 810
EE + V E++ P
Sbjct: 191 PEEKV-VNENSSLP 203
>TAIR9_protein||AT2G03640.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr2:1104525-1106418 REVERSE
Length = 423
Score = 102 bits (254), Expect = 3e-022
Identities = 66/194 (34%), Positives = 99/194 (51%), Gaps = 4/194 (2%)
Frame = +1
Query: 232 PDLVGNAFVHQYYHILHHSPQHVHRFYQDISKLGRPEDNNGTMSITSTLQGIDKKILALG 411
P VGN FV +YY+ L+ S VH+FY + S + RP + ++I S L+GI+ +I+++
Sbjct: 12 PQFVGNGFVQEYYNHLYDSTSEVHKFYLEDSMISRPGLDGEIVTIKS-LKGINDQIMSID 70
Query: 412 DGVIGAEIATVDTQDSYGGGFLLLVTGYLTGKDGVRRTFTQTFFLAPQENGYFVLNDMFR 591
EI T D+Q + G + LVTG + G DG RR F+Q+FFL + YFVLND FR
Sbjct: 71 YKSSRIEILTADSQSTLKNGVVTLVTGLVIGNDGGRRKFSQSFFLVSRNGSYFVLNDTFR 130
Query: 592 YIDEATIVNNIQVPVNVHQDPPATQDIPVQETYVQENHAVEQSDVLSKSING-PEVFAPT 768
Y+ + + V Q A + P E+ E ++K + P A
Sbjct: 131 YVSDEFVEPEATKEVEESQSTNAITE-PANESVEAVIVPTEAKTTVTKPASAIPNGHAKV 189
Query: 769 EEELISVTEDAPAP 810
EE + V E++ P
Sbjct: 190 PEEKV-VNENSSLP 202
>TAIR9_protein||AT5G43960.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr5:17689154-17691653 REVERSE
Length = 451
Score = 97 bits (239), Expect = 2e-020
Identities = 59/162 (36%), Positives = 91/162 (56%), Gaps = 10/162 (6%)
Frame = +1
Query: 241 VGNAFVHQYYHILHHSPQHVHRFYQDISKLGRPEDNNGTMSITSTLQGIDKKILALGDGV 420
VG+ FV QYY +L P +H+FY + S+ R D + T + S L I +++L
Sbjct: 11 VGSYFVGQYYQVLQQQPDLIHQFYSEPSRAIR-IDGDSTETANSLLH-IHNMVMSLNFTA 68
Query: 421 IGAEIATVDTQDSYGGGFLLLVTGYLTGKD-GVRRTFTQTFFLAPQENGYFVLNDMFRYI 597
I E+ T+++ +S+ GG L++V+G + K+ RR+F QTFFLAPQE GYFVL+D+F ++
Sbjct: 69 I--EVKTINSVESWEGGVLVVVSGSVKTKEFSNRRSFVQTFFLAPQEKGYFVLSDVFLFV 126
Query: 598 DEATIVNN-----IQVPVNVHQDPPATQDIPVQETYVQENHA 708
DE T+ + ++ +PP P YV E A
Sbjct: 127 DEGTVYYHQPSYLSEIKHEAQLNPPTRHPDPQVSDYVLEEEA 168
>TAIR9_protein||AT1G69250.2 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr1:26033163-26035007 FORWARD
Length = 390
Score = 95 bits (234), Expect = 7e-020
Identities = 50/117 (42%), Positives = 72/117 (61%), Gaps = 2/117 (1%)
Frame = +1
Query: 253 FVHQYYHILHHSPQHVHRFYQDISKLGRPEDNNGTMSITSTLQGIDKKILALGDGVIGAE 432
FV QYYH+L P R Y D S + RP D GTM ++++ I+K IL+ E
Sbjct: 17 FVRQYYHVLGQLPHEARRLYVDASVVSRP-DVTGTMMSFTSVEAINKHILSCDFENTKFE 75
Query: 433 IATVDTQDSYGGGFLLLVTGYLTGKDGVRRTFTQTFFLAPQENGYFVLNDMFRYIDE 603
+ +VD+Q+S G ++V G++TGKD RR F+Q F+LA ++N VLNDM RY+D+
Sbjct: 76 VLSVDSQNSLEDGIFIMVIGFMTGKDNQRRKFSQMFYLA-RQNTLVVLNDMLRYVDQ 131
>TAIR9_protein||AT1G69250.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr1:26033163-26035301 FORWARD
Length = 428
Score = 95 bits (234), Expect = 7e-020
Identities = 50/117 (42%), Positives = 72/117 (61%), Gaps = 2/117 (1%)
Frame = +1
Query: 253 FVHQYYHILHHSPQHVHRFYQDISKLGRPEDNNGTMSITSTLQGIDKKILALGDGVIGAE 432
FV QYYH+L P R Y D S + RP D GTM ++++ I+K IL+ E
Sbjct: 17 FVRQYYHVLGQLPHEARRLYVDASVVSRP-DVTGTMMSFTSVEAINKHILSCDFENTKFE 75
Query: 433 IATVDTQDSYGGGFLLLVTGYLTGKDGVRRTFTQTFFLAPQENGYFVLNDMFRYIDE 603
+ +VD+Q+S G ++V G++TGKD RR F+Q F+LA ++N VLNDM RY+D+
Sbjct: 76 VLSVDSQNSLEDGIFIMVIGFMTGKDNQRRKFSQMFYLA-RQNTLVVLNDMLRYVDQ 131
>TAIR9_protein||AT3G07250.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr3:2300579-2308305 REVERSE
Length = 1295
Score = 92 bits (226), Expect = 6e-019
Identities = 59/176 (33%), Positives = 94/176 (53%), Gaps = 9/176 (5%)
Frame = +1
Query: 241 VGNAFVHQYYHILHHSPQHVHRFYQDISKLGRPEDNNGTMSITSTLQGIDKKILALGDGV 420
VG+ F QYY+ L ++P+++++ Y+D S + RP +GTM + + + + + D V
Sbjct: 281 VGDEFARQYYNTLQNAPENLYKLYKDKSTISRP-GLDGTMRVFTLSKDLKWRSPGSFDSV 339
Query: 421 IGAEIATVDTQDSYGGGFLLLVTGYLTGKDGVRRTFTQTFFLAPQENGYFVLNDMFRYID 600
+I +V +QDS G L++V GYLT + R FTQ FFL PQE GY V DMFR++D
Sbjct: 340 ---KITSVTSQDSLKQGILVVVYGYLTFNERPARHFTQVFFLVPQEKGYIVCTDMFRFVD 396
Query: 601 EATIVNNIQVPVN--VHQDPPATQDIPVQETYVQENHAVEQSDVLSKSINGPEVFA 762
N P N + + P T+ ++ + + NH + LS + G + A
Sbjct: 397 -IPEANAAIPPANDVIEEKVPETEGAALRVS--EPNHGFDNVPKLSCASEGAAICA 449
Score = 78 bits (190), Expect = 8e-015
Identities = 48/117 (41%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Frame = +1
Query: 253 FVHQYYHILHHSPQHVHRFYQDISKLGRPEDNNGTMSITSTLQGI--DKKILALGDGVIG 426
F YY+ L +SP+ + +Y+D+SK+ RP +GTM +STL I D +L+ G G
Sbjct: 948 FSEHYYNNLQNSPEILPGYYKDVSKITRP-GLDGTMR-SSTLPDIIEDLDMLSPG-GFDS 1004
Query: 427 AEIATVDTQDSYGGGFLLLVTGYLTGKDGVRRTFTQTFFLAPQENGYFVLNDMFRYI 597
E+ +V +QDS+ G + V GY T + R FTQ F APQE G FV DMF+++
Sbjct: 1005 VEVTSVMSQDSHDKGIRVAVDGYFTFNERPARNFTQNFTFAPQEKGLFVSTDMFKFV 1061
>TAIR9_protein||AT5G43960.2 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr5:17689154-17691220 REVERSE
Length = 392
Score = 72 bits (174), Expect = 6e-013
Identities = 38/99 (38%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Frame = +1
Query: 430 EIATVDTQDSYGGGFLLLVTGYLTGKD-GVRRTFTQTFFLAPQENGYFVLNDMFRYIDEA 606
E+ T+++ +S+ GG L++V+G + K+ RR+F QTFFLAPQE GYFVL+D+F ++DE
Sbjct: 11 EVKTINSVESWEGGVLVVVSGSVKTKEFSNRRSFVQTFFLAPQEKGYFVLSDVFLFVDEG 70
Query: 607 TIVNN-----IQVPVNVHQDPPATQDIPVQETYVQENHA 708
T+ + ++ +PP P YV E A
Sbjct: 71 TVYYHQPSYLSEIKHEAQLNPPTRHPDPQVSDYVLEEEA 109
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,865,654,250
Number of Sequences: 33410
Number of Extensions: 3865654250
Number of Successful Extensions: 147658413
Number of sequences better than 0.0: 0
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