BLASTX 7.6.2
Query= UN06411 /QuerySize=1579
(1578 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15230291|ref|NP_188544.1| RNA-binding protein 47B [Arabidopsi... 720 3e-205
gi|297834824|ref|XP_002885294.1| RNA-binding protein 47B [Arabid... 713 2e-203
gi|9294614|dbj|BAB02953.1| DNA/RNA binding protein-like [Arabido... 664 2e-188
gi|21618243|gb|AAM67293.1| nuclear acid binding protein, putativ... 661 2e-187
gi|15222783|ref|NP_175383.1| RNA-binding protein 47A [Arabidopsi... 612 6e-173
gi|297852632|ref|XP_002894197.1| hypothetical protein ARALYDRAFT... 606 5e-171
gi|255555523|ref|XP_002518798.1| nuclear acid binding protein, p... 541 1e-151
gi|224123466|ref|XP_002330321.1| predicted protein [Populus tric... 527 3e-147
gi|10120421|gb|AAG13046.1|AC011807_5 Putative RNA binding protei... 418 2e-114
gi|297846966|ref|XP_002891364.1| ATRBP47C [Arabidopsis lyrata su... 286 8e-075
gi|15220233|ref|NP_175180.1| RNA-binding protein 47C [Arabidopsi... 279 1e-072
gi|42571787|ref|NP_973984.1| RNA-binding protein 47C [Arabidopsi... 279 1e-072
gi|15220241|ref|NP_175181.1| RNA-binding protein 47C' [Arabidops... 272 2e-070
gi|297792959|ref|XP_002864364.1| hypothetical protein ARALYDRAFT... 257 5e-066
gi|125558527|gb|EAZ04063.1| hypothetical protein OsI_26200 [Oryz... 249 1e-063
gi|125600441|gb|EAZ40017.1| hypothetical protein OsJ_24455 [Oryz... 249 1e-063
gi|9758270|dbj|BAB08769.1| unnamed protein product [Arabidopsis ... 249 1e-063
gi|18423684|ref|NP_568815.1| RNA-binding protein 45A [Arabidopsi... 249 1e-063
gi|34395215|dbj|BAC83714.1| RNA Binding Protein-like [Oryza sati... 243 1e-061
>gi|15230291|ref|NP_188544.1| RNA-binding protein 47B [Arabidopsis thaliana]
Length = 435
Score = 720 bits (1856), Expect = 3e-205
Identities = 363/436 (83%), Positives = 386/436 (88%), Gaps = 17/436 (3%)
Frame = +2
Query: 92 MQTTNGSDSSLATPGAT-----TPPPPQQW--QQQQQQHWMAAMQYPGAAAMMMMQQQQM 250
MQTTNGSDS+LAT GAT TPPPPQQW QQQQQQ WMAAMQYP AAAMMMMQQQQM
Sbjct: 1 MQTTNGSDSTLATSGATPPNQQTPPPPQQWQQQQQQQQQWMAAMQYPPAAAMMMMQQQQM 60
Query: 251 MMYPHQYVPYNY-QQQQQHPHF-QYASYQ----QQHKTHERGSGDDVKTLWIGDLLYWMD 412
+MYPHQYVPYN QQ HP QY SYQ QQHK +RGSGDDVKTLW+GDLL+WMD
Sbjct: 61 LMYPHQYVPYNQGPYQQHHPQLHQYGSYQQHQHQQHKAIDRGSGDDVKTLWVGDLLHWMD 120
Query: 413 ETYLHNCFSHTGEVSSVKVIRNKLTCQSEGYGFVEFLSRAAAEEVLQNFNGSVMPNSEQL 592
ETYLH+CFSHTGEVSSVKVIRNKLT QSEGYGFVEFLSRAAAEEVLQN++GSVMPNS+Q
Sbjct: 121 ETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSDQP 180
Query: 593 FRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDSNT 772
FR+NWASFSTGEKRAVENGP+LS+FVGDLSPDVTD LL E F +RYPSVKSAKVVIDSNT
Sbjct: 181 FRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNT 240
Query: 773 GRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATPKRAVANQQQQHHPSQALIL 952
GRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVG+ATPKRA+ANQQQ H SQA+IL
Sbjct: 241 GRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKRAIANQQQ--HSSQAVIL 298
Query: 953 AGGHGANGYMAHGSQSDG*SNNSTIFVGGIDPDVTEEDLRQPFSQVGEVVSVKIPVGKGC 1132
AGGHG+NG M +GSQSDG S N+TIFVGGIDPDV +EDLRQPFSQ GEVVSVKIPVGKGC
Sbjct: 299 AGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGC 358
Query: 1133 GFVQLANRKSADDAIQSLNGTVIGKNTVRLSWGRSPNKQWRGDSGQQWNGA-QRGQGCNN 1309
GFVQ A+RKSA+DAI+SLNGTVIGKNTVRLSWGRSPNKQWRGDSGQQWNG RG G NN
Sbjct: 359 GFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSPNKQWRGDSGQQWNGGYSRGHGYNN 418
Query: 1310 -GGYANHHDSNTYPAE 1354
GGYANHHDSN Y E
Sbjct: 419 GGGYANHHDSNNYHGE 434
>gi|297834824|ref|XP_002885294.1| RNA-binding protein 47B [Arabidopsis lyrata
subsp. lyrata]
Length = 435
Score = 713 bits (1840), Expect = 2e-203
Identities = 362/437 (82%), Positives = 384/437 (87%), Gaps = 19/437 (4%)
Frame = +2
Query: 92 MQTTNGSDSSLATPGAT-----TPPPPQQWQQ---QQQQHWM-AAMQYPGAAAMMMMQQQ 244
MQTTNGSDS+LAT GAT TPPPP QWQQ QQQQ WM AAMQYP AAAMMMMQQQ
Sbjct: 1 MQTTNGSDSTLATSGATPPNQQTPPPPHQWQQQPPQQQQQWMAAAMQYP-AAAMMMMQQQ 59
Query: 245 QMMMYPHQYVPYN-----YQQQQQHPHFQYASYQQQHKTHERGSGDDVKTLWIGDLLYWM 409
QMMMYPHQYVPYN + Q H + Y +QQQHK +RGSGDDVKTLW+GDLL+WM
Sbjct: 60 QMMMYPHQYVPYNQGPYQHHHPQLHQYGSYQQHQQQHKPLDRGSGDDVKTLWVGDLLHWM 119
Query: 410 DETYLHNCFSHTGEVSSVKVIRNKLTCQSEGYGFVEFLSRAAAEEVLQNFNGSVMPNSEQ 589
DETYLH+CFSHTGEVSSVKVIRNKLT QSEGYGF+EFLSRAAAEEVLQN++GS+MPNS+Q
Sbjct: 120 DETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFIEFLSRAAAEEVLQNYSGSLMPNSDQ 179
Query: 590 LFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDSN 769
FR+NWASFSTGEKRAVENGP+LSIFVGDLSPDVTD LL E F +RYPSVKSAKVVIDSN
Sbjct: 180 PFRINWASFSTGEKRAVENGPDLSIFVGDLSPDVTDALLHETFFDRYPSVKSAKVVIDSN 239
Query: 770 TGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATPKRAVANQQQQHHPSQALI 949
TGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATPKRA+ANQQQ H SQALI
Sbjct: 240 TGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATPKRAIANQQQ--HSSQALI 297
Query: 950 LAGGHGANGYMAHGSQSDG*SNNSTIFVGGIDPDVTEEDLRQPFSQVGEVVSVKIPVGKG 1129
LAGGHGANG MAHGSQSDG S N+TIFVGGID DVT+EDLRQPFSQ GEVVSVKIPVGKG
Sbjct: 298 LAGGHGANGSMAHGSQSDGESTNATIFVGGIDADVTDEDLRQPFSQFGEVVSVKIPVGKG 357
Query: 1130 CGFVQLANRKSADDAIQSLNGTVIGKNTVRLSWGRSPNKQWRGDSGQQWNGA-QRGQGCN 1306
CGFVQ A RKSA+DAI++LNGTVIGKNTVRLSWGRSPNKQWRGDSGQQWNG RGQG N
Sbjct: 358 CGFVQFAERKSAEDAIETLNGTVIGKNTVRLSWGRSPNKQWRGDSGQQWNGGYSRGQGYN 417
Query: 1307 N-GGYANHHDSNTYPAE 1354
N GGYANHHDSN Y E
Sbjct: 418 NGGGYANHHDSNNYHGE 434
>gi|9294614|dbj|BAB02953.1| DNA/RNA binding protein-like [Arabidopsis thaliana]
Length = 489
Score = 664 bits (1711), Expect = 2e-188
Identities = 335/399 (83%), Positives = 358/399 (89%), Gaps = 15/399 (3%)
Frame = +2
Query: 92 MQTTNGSDSSLATPGAT-----TPPPPQQW--QQQQQQHWMAAMQYPGAAAMMMMQQQQM 250
MQTTNGSDS+LAT GAT TPPPPQQW QQQQQQ WMAAMQYP AAAMMMMQQQQM
Sbjct: 1 MQTTNGSDSTLATSGATPPNQQTPPPPQQWQQQQQQQQQWMAAMQYPPAAAMMMMQQQQM 60
Query: 251 MMYPHQYVPYNY-QQQQQHPHF-QYASYQ----QQHKTHERGSGDDVKTLWIGDLLYWMD 412
+MYPHQYVPYN QQ HP QY SYQ QQHK +RGSGDDVKTLW+GDLL+WMD
Sbjct: 61 LMYPHQYVPYNQGPYQQHHPQLHQYGSYQQHQHQQHKAIDRGSGDDVKTLWVGDLLHWMD 120
Query: 413 ETYLHNCFSHTGEVSSVKVIRNKLTCQSEGYGFVEFLSRAAAEEVLQNFNGSVMPNSEQL 592
ETYLH+CFSHTGEVSSVKVIRNKLT QSEGYGFVEFLSRAAAEEVLQN++GSVMPNS+Q
Sbjct: 121 ETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSDQP 180
Query: 593 FRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDSNT 772
FR+NWASFSTGEKRAVENGP+LS+FVGDLSPDVTD LL E F +RYPSVKSAKVVIDSNT
Sbjct: 181 FRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNT 240
Query: 773 GRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATPKRAVANQQQQHHPSQALIL 952
GRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVG+ATPKRA+ANQQQ H SQA+IL
Sbjct: 241 GRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKRAIANQQQ--HSSQAVIL 298
Query: 953 AGGHGANGYMAHGSQSDG*SNNSTIFVGGIDPDVTEEDLRQPFSQVGEVVSVKIPVGKGC 1132
AGGHG+NG M +GSQSDG S N+TIFVGGIDPDV +EDLRQPFSQ GEVVSVKIPVGKGC
Sbjct: 299 AGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGC 358
Query: 1133 GFVQLANRKSADDAIQSLNGTVIGKNTVRLSWGRSPNKQ 1249
GFVQ A+RKSA+DAI+SLNGTVIGKNTVRLSWGRSPNKQ
Sbjct: 359 GFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSPNKQ 397
>gi|21618243|gb|AAM67293.1| nuclear acid binding protein, putative [Arabidopsis
thaliana]
Length = 392
Score = 661 bits (1703), Expect = 2e-187
Identities = 330/393 (83%), Positives = 352/393 (89%), Gaps = 10/393 (2%)
Frame = +2
Query: 200 MQYPGAAAMMMMQQQQMMMYPHQYVPYNY-QQQQQHPHF-QYASYQ----QQHKTHERGS 361
MQYP AAAMMMMQQQQM+MYPHQYVPYN QQ HP QY SYQ QQHK +RGS
Sbjct: 1 MQYPPAAAMMMMQQQQMLMYPHQYVPYNQGPYQQHHPQLHQYGSYQQHQHQQHKAIDRGS 60
Query: 362 GDDVKTLWIGDLLYWMDETYLHNCFSHTGEVSSVKVIRNKLTCQSEGYGFVEFLSRAAAE 541
GDDVKTLW+GDLL+WMDETYLH+CFSHTGEVSSVKVIRNKLT QSEGYGFVEFLSRAAAE
Sbjct: 61 GDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAE 120
Query: 542 EVLQNFNGSVMPNSEQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFV 721
EVLQN++GSVMPNS+Q FR+NWASFSTGEKRAVENGP+LS+FVGDLSPDVTD LL E F
Sbjct: 121 EVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFS 180
Query: 722 ERYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATPKR 901
+RYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVG+ATPKR
Sbjct: 181 DRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKR 240
Query: 902 AVANQQQQHHPSQALILAGGHGANGYMAHGSQSDG*SNNSTIFVGGIDPDVTEEDLRQPF 1081
A+ANQQQ H SQA+ILAGGHG+NG M +GSQSDG S N+TIFVGGIDPDV +EDLRQPF
Sbjct: 241 AIANQQQ--HSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPF 298
Query: 1082 SQVGEVVSVKIPVGKGCGFVQLANRKSADDAIQSLNGTVIGKNTVRLSWGRSPNKQWRGD 1261
SQ GEVVSVKIPVGKGCGFVQ A+RKSA+DAI+SLNGTVIGKNTVRLSWGRSPNKQWRGD
Sbjct: 299 SQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSPNKQWRGD 358
Query: 1262 SGQQWNGA-QRGQGCNN-GGYANHHDSNTYPAE 1354
SGQQWNG RG G NN GGYANHHDSN Y E
Sbjct: 359 SGQQWNGGYSRGHGYNNGGGYANHHDSNNYHGE 391
>gi|15222783|ref|NP_175383.1| RNA-binding protein 47A [Arabidopsis thaliana]
Length = 445
Score = 612 bits (1577), Expect = 6e-173
Identities = 316/414 (76%), Positives = 340/414 (82%), Gaps = 21/414 (5%)
Frame = +2
Query: 140 TTPPPPQQWQQ--QQQQHWMAAMQYPGAAAMMMMQQQQMMMYPH-QYVPYNYQQQQQHPH 310
+TPPP QQ QQ QQQQ WMAAMQ AAAM MMQQQQMMMYPH QY PYN QQHP
Sbjct: 30 STPPPQQQQQQQWQQQQQWMAAMQQYPAAAMAMMQQQQMMMYPHPQYAPYNQAAYQQHPQ 89
Query: 311 FQYASYQQQHKTHER--------GSGDDVKTLWIGDLLYWMDETYLHNCFSHTGEVSSVK 466
FQYA+YQQQ + H + GDDVKTLW+GDLL+WMDETYLH CFSHT EVSSVK
Sbjct: 90 FQYAAYQQQQQQHHQSQQQPRGGSGGDDVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVK 149
Query: 467 VIRNKLTCQSEGYGFVEFLSRAAAEEVLQNFNGSVMPNSEQLFRLNWASFSTGEKRAVEN 646
VIRNK TCQSEGYGFVEFLSR+AAEE LQ+F+G MPN+EQ FRLNWASFSTGEKRA EN
Sbjct: 150 VIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGEKRASEN 209
Query: 647 GPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERS 826
GP+LSIFVGDL+PDV+D +L E F RYPSVK AKVVIDSNTGRSKGYGFVRFGDENERS
Sbjct: 210 GPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERS 269
Query: 827 RALTEMNGAYCSNRQMRVGVATPKRAVANQQQQHHPSQALILAGGHGANGYMAHGSQSDG 1006
RA+TEMNGA+CS+RQMRVG+ATPKRA A QQ + SQAL LAGGHG N GS SDG
Sbjct: 270 RAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQ--NGSQALTLAGGHGGN-----GSMSDG 322
Query: 1007 *SNNSTIFVGGIDPDVTEEDLRQPFSQVGEVVSVKIPVGKGCGFVQLANRKSADDAIQSL 1186
SNNSTIFVGG+D DVTEEDL QPFS GEVVSVKIPVGKGCGFVQ ANR+SA++AI +L
Sbjct: 323 ESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNL 382
Query: 1187 NGTVIGKNTVRLSWGRSPNKQWRGDSGQQWNGA-QRGQGCNNGGYANHHDSNTY 1345
NGTVIGKNTVRLSWGRSPNKQWR DSG QWNG RGQG NN GYAN DSN Y
Sbjct: 383 NGTVIGKNTVRLSWGRSPNKQWRSDSGNQWNGGYSRGQGYNN-GYAN-QDSNMY 434
>gi|297852632|ref|XP_002894197.1| hypothetical protein ARALYDRAFT_474095
[Arabidopsis lyrata subsp. lyrata]
Length = 450
Score = 606 bits (1561), Expect = 5e-171
Identities = 318/419 (75%), Positives = 343/419 (81%), Gaps = 26/419 (6%)
Frame = +2
Query: 140 TTPPPPQQWQQ----QQQQHWMAAMQYPGAAAMMMMQQQQMMMYP-HQYVPYNYQQQQQH 304
+TPPP QQ QQ QQQQ WMAAMQ AAAM MMQQQQMMMYP HQY PYN QQH
Sbjct: 30 STPPPQQQQQQQQQWQQQQQWMAAMQQYPAAAMAMMQQQQMMMYPHHQYAPYNQAAYQQH 89
Query: 305 PHFQY-ASYQQQHKTHE--------RG--SGDDVKTLWIGDLLYWMDETYLHNCFSHTGE 451
P FQY A+YQQQ + H+ RG GDDVKTLW+GDLL+WMDETYLH CFSHT E
Sbjct: 90 PQFQYAAAYQQQQQHHQSQQQKQQPRGGSGGDDVKTLWVGDLLHWMDETYLHTCFSHTNE 149
Query: 452 VSSVKVIRNKLTCQSEGYGFVEFLSRAAAEEVLQNFNGSVMPNSEQLFRLNWASFSTGEK 631
VSSVKVIRNK TCQSEGYGFVEFLSR+AAEE LQ+F+G MPN+EQ FRLNWASFSTGEK
Sbjct: 150 VSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGEK 209
Query: 632 RAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDSNTGRSKGYGFVRFGD 811
RA ENGP+LSIFVGDL+PDV+D +L E F RYPSVK AKVVIDSNTGRSKGYGFVRFGD
Sbjct: 210 RASENGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGD 269
Query: 812 ENERSRALTEMNGAYCSNRQMRVGVATPKRAVANQQQQHHPSQALILAGGHGANGYMAHG 991
ENERSRA+TEMNGA+CS+RQMRVG+ATPKRA A QQ + SQAL LAGGHG N G
Sbjct: 270 ENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQ--NGSQALTLAGGHGGN-----G 322
Query: 992 SQSDG*SNNSTIFVGGIDPDVTEEDLRQPFSQVGEVVSVKIPVGKGCGFVQLANRKSADD 1171
S SDG SNNSTIFVGG+D DVTEEDL QPFSQ GEVVSVKIPVGKGCGFVQ ANR+SA++
Sbjct: 323 SLSDGESNNSTIFVGGLDADVTEEDLMQPFSQFGEVVSVKIPVGKGCGFVQFANRQSAEE 382
Query: 1172 AIQSLNGTVIGKNTVRLSWGRSPNKQWRGDSGQQWNGA-QRGQGCNNGGYANHHDSNTY 1345
AI +LNGTVIGKNTVRLSWGRSPNKQWR D+G QWNG RGQG NN GYAN DSN Y
Sbjct: 383 AIGNLNGTVIGKNTVRLSWGRSPNKQWRSDTGNQWNGGYSRGQGYNN-GYAN-QDSNMY 439
>gi|255555523|ref|XP_002518798.1| nuclear acid binding protein, putative
[Ricinus communis]
Length = 438
Score = 541 bits (1393), Expect = 1e-151
Identities = 284/410 (69%), Positives = 323/410 (78%), Gaps = 20/410 (4%)
Frame = +2
Query: 158 QQW----QQQQQQHWMAAMQYPGAAAMMMMQQQQMMMYPHQYVPY-NYQQQQQHPHFQYA 322
QQW QQQQQQ WMAAMQYP AA M+M QQ MMMYP Q+ PY Y QQQQ H Q+
Sbjct: 30 QQWIPHMQQQQQQQWMAAMQYPAAA--MVMMQQHMMMYPQQHHPYMGYYQQQQQYHKQH- 86
Query: 323 SYQQQHKTHERGS---GDDVKTLWIGDLLYWMDETYLHNCFSHTGEVSSVKVIRNKLTCQ 493
YQ+QHK ++ +D KT+W+GDLL+WMDETYLH+CFSHTGEV+SVKVIRNK T Q
Sbjct: 87 -YQKQHKPQQQQQHVPTEDSKTIWVGDLLHWMDETYLHSCFSHTGEVTSVKVIRNKQTGQ 145
Query: 494 SEGYGFVEFLSRAAAEEVLQNFNGSVMPNSEQLFRLNWASFSTGEKRAVENGPELSIFVG 673
EGYGF+EF S A AE+VLQN+NGS+MPN++Q FRLNWASF+ GE+R E G +LSIFVG
Sbjct: 146 PEGYGFIEFYSHATAEKVLQNYNGSMMPNADQPFRLNWASFA-GERR-TETGSDLSIFVG 203
Query: 674 DLSPDVTDTLLQELFVERYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGA 853
DL+ DVTD +LQE F +Y SVK AKVV D NTGRSKGYGFVRFGDENERSRA+ EMNG
Sbjct: 204 DLAADVTDAMLQETFSSKYLSVKGAKVVTDLNTGRSKGYGFVRFGDENERSRAMMEMNGV 263
Query: 854 YCSNRQMRVGVATPKRAVANQQQQHHPSQALILAGGHGANGYMAHGSQSDG*SNNSTIFV 1033
YCS+R MR+GVATPK++ A QQQ + SQAL+LAGGH NG MA GSQSDG SNN+TIFV
Sbjct: 264 YCSSRPMRIGVATPKKSPAYQQQ--YSSQALVLAGGHAPNGSMAQGSQSDGDSNNTTIFV 321
Query: 1034 GGIDPDVTEEDLRQPFSQVGEVVSVKIPVGKGCGFVQLANRKSADDAIQSLNGTVIGKNT 1213
GGID D+++EDLRQPFSQ GEVVSVKIP GKGCGFVQ A+RKSA+DA+QSLNGT IGK T
Sbjct: 322 GGIDSDISDEDLRQPFSQFGEVVSVKIPAGKGCGFVQFADRKSAEDALQSLNGTTIGKQT 381
Query: 1214 VRLSWGRSP-NKQWRGDSGQQWNGAQ-RGQGCNNGGY--ANHHDSNTYPA 1351
VRLSWGRSP NKQWRGD QWNGA GQG GY A + D N Y A
Sbjct: 382 VRLSWGRSPANKQWRGDHNNQWNGAYFGGQGYGGYGYAMAPNQDQNMYVA 431
>gi|224123466|ref|XP_002330321.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 527 bits (1356), Expect = 3e-147
Identities = 271/384 (70%), Positives = 314/384 (81%), Gaps = 16/384 (4%)
Frame = +2
Query: 200 MQYPGAAAMMMMQQQQMMMYPHQYVPY--NYQQQQQHPHFQYASYQQQH------KTHER 355
MQYP AA M M QQQMMMYPHQ + Y QQQQH H QY + QQQ+ + ++
Sbjct: 1 MQYPAAA--MAMMQQQMMMYPHQQHHHYMAYYQQQQHQHQQYQNKQQQYHQKQQKQLQQQ 58
Query: 356 GSGDDVKTLWIGDLLYWMDETYLHNCFSHTGEVSSVKVIRNKLTCQSEGYGFVEFLSRAA 535
GS ++ KT+W+GDLL+WMDE YLHNCFSHTGEVSSVK+IRNK T Q EGYGFVEF SRAA
Sbjct: 59 GSNEEAKTIWVGDLLHWMDEAYLHNCFSHTGEVSSVKIIRNKQTGQLEGYGFVEFYSRAA 118
Query: 536 AEEVLQNFNGSVMPNSEQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQEL 715
AE+VLQ+++GS+MPN+EQ FRLNWASF+ GE+RA + G +LSIFVGDL+ DVTD++LQE
Sbjct: 119 AEKVLQSYSGSMMPNTEQPFRLNWASFA-GERRA-DPGSDLSIFVGDLAADVTDSMLQET 176
Query: 716 FVERYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATP 895
F +YPSVK AKVVIDSNTGRSKGYGFVRFGDENE++RA+ EMNGA+CS+R MR+GVATP
Sbjct: 177 FAGKYPSVKGAKVVIDSNTGRSKGYGFVRFGDENEKTRAMMEMNGAFCSSRPMRIGVATP 236
Query: 896 KRAVANQQQQHHPSQALILAGGHGANGYMAHGSQSDG*SNNSTIFVGGIDPDVTEEDLRQ 1075
K+ A QQQ + SQAL+LAGGH +NG MA GSQSDG SNN+TIFVGGID DVT+EDLRQ
Sbjct: 237 KKPSAYQQQ--YSSQALVLAGGHASNGAMAQGSQSDGDSNNTTIFVGGIDSDVTDEDLRQ 294
Query: 1076 PFSQVGEVVSVKIPVGKGCGFVQLANRKSADDAIQSLNGTVIGKNTVRLSWGRSP-NKQW 1252
PFSQ GEVVSVKIPVGKGC FVQ ANRK+A+DA+QSLNGT IGK TVRLSWGR+P NKQW
Sbjct: 295 PFSQFGEVVSVKIPVGKGCAFVQFANRKNAEDALQSLNGTTIGKQTVRLSWGRTPANKQW 354
Query: 1253 RGDSGQQWNGAQ-RGQGCNNGGYA 1321
RGD G QW+G GQG GYA
Sbjct: 355 RGDHGNQWHGGYFGGQGYAGYGYA 378
>gi|10120421|gb|AAG13046.1|AC011807_5 Putative RNA binding protein [Arabidopsis
thaliana]
Length = 468
Score = 418 bits (1072), Expect = 2e-114
Identities = 212/281 (75%), Positives = 231/281 (82%), Gaps = 13/281 (4%)
Frame = +2
Query: 140 TTPPPPQQWQQ--QQQQHWMAAMQYPGAAAMMMMQQQQMMMYPH-QYVPYNYQQQQQHPH 310
+TPPP QQ QQ QQQQ WMAAMQ AAAM MMQQQQMMMYPH QY PYN QQHP
Sbjct: 30 STPPPQQQQQQQWQQQQQWMAAMQQYPAAAMAMMQQQQMMMYPHPQYAPYNQAAYQQHPQ 89
Query: 311 FQYASYQQQHKTHER--------GSGDDVKTLWIGDLLYWMDETYLHNCFSHTGEVSSVK 466
FQYA+YQQQ + H + GDDVKTLW+GDLL+WMDETYLH CFSHT EVSSVK
Sbjct: 90 FQYAAYQQQQQQHHQSQQQPRGGSGGDDVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVK 149
Query: 467 VIRNKLTCQSEGYGFVEFLSRAAAEEVLQNFNGSVMPNSEQLFRLNWASFSTGEKRAVEN 646
VIRNK TCQSEGYGFVEFLSR+AAEE LQ+F+G MPN+EQ FRLNWASFSTGEKRA EN
Sbjct: 150 VIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGEKRASEN 209
Query: 647 GPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERS 826
GP+LSIFVGDL+PDV+D +L E F RYPSVK AKVVIDSNTGRSKGYGFVRFGDENERS
Sbjct: 210 GPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERS 269
Query: 827 RALTEMNGAYCSNRQMRVGVATPKRAVANQQQQHHPSQALI 949
RA+TEMNGA+CS+RQMRVG+ATPKRA A QQ + SQ LI
Sbjct: 270 RAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQ--NGSQGLI 308
Score = 202 bits (513), Expect = 2e-049
Identities = 106/136 (77%), Positives = 111/136 (81%), Gaps = 8/136 (5%)
Frame = +2
Query: 941 ALILAGGHGANGYMAHGSQSDG*SNNSTIFVGGIDPDVTEEDLRQPFSQVGEVVSVKIPV 1120
AL LAGGHG N GS SDG SNNSTIFVGG+D DVTEEDL QPFS GEVVSVKIPV
Sbjct: 329 ALTLAGGHGGN-----GSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPV 383
Query: 1121 GKGCGFVQLANRKSADDAIQSLNGTVIGKNTVRLSWGRSPNKQWRGDSGQQWNGA-QRGQ 1297
GKGCGFVQ ANR+SA++AI +LNGTVIGKNTVRLSWGRSPNKQWR DSG QWNG RGQ
Sbjct: 384 GKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSPNKQWRSDSGNQWNGGYSRGQ 443
Query: 1298 GCNNGGYANHHDSNTY 1345
G NN GYAN DSN Y
Sbjct: 444 GYNN-GYAN-QDSNMY 457
>gi|297846966|ref|XP_002891364.1| ATRBP47C [Arabidopsis lyrata subsp. lyrata]
Length = 443
Score = 286 bits (731), Expect = 8e-075
Identities = 158/295 (53%), Positives = 195/295 (66%), Gaps = 21/295 (7%)
Frame = +2
Query: 131 PGATTPPPPQQWQQQQQQ----------HWMAAMQYPGAAAMMMMQQQQMMMYPHQYVPY 280
P PPPPQ ++++ HW M+YP +M Q PH + PY
Sbjct: 24 PSPPPPPPPQPPVEEEENQPKTSPTPPPHW---MRYP-PPVLMPPQMMYAPPPPHPFSPY 79
Query: 281 NYQQQQQHPHFQYASYQQQHKTHERGSGDDVKTLWIGDLLYWMDETYLHNCF-SHTGEVS 457
+Q H H Q S + H+ S + KT+W+GDL +WMDETYL++ F S GE+
Sbjct: 80 -HQYPSHHLHHQ--SRGNNNNKHQNASNGENKTIWVGDLHHWMDETYLNSSFASADGEIQ 136
Query: 458 --SVKVIRNKLTCQSEGYGFVEFLSRAAAEEVLQNFNGSVMPNSEQLFRLNWASFSTGEK 631
SVKVIRNK SEGYGFVEF S A++VLQ FNG+ MP++EQ FRLNWASFSTGEK
Sbjct: 137 IVSVKVIRNKHNGLSEGYGFVEFDSHDVADKVLQEFNGTTMPDTEQPFRLNWASFSTGEK 196
Query: 632 RAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDSNTGRSKGYGFVRFGD 811
R NGP+LSIFVGDL+PDV+DTLL E F E+YPSVK+AKVVID+NTGRSKGYGFVRFGD
Sbjct: 197 RLENNGPDLSIFVGDLAPDVSDTLLHETFSEKYPSVKAAKVVIDANTGRSKGYGFVRFGD 256
Query: 812 ENERSRALTEMNGAYCSNRQMRVGVATPKRAVANQQQ-QHHPSQALILAGGHGAN 973
ENER++A+TEMNG CS+R MR+G ATP++ QQQ + P+ AL G N
Sbjct: 257 ENERTKAMTEMNGVKCSSRAMRIGPATPRKTTGYQQQGGYMPNGALTRPEGDTLN 311
>gi|15220233|ref|NP_175180.1| RNA-binding protein 47C [Arabidopsis thaliana]
Length = 432
Score = 279 bits (712), Expect = 1e-072
Identities = 145/282 (51%), Positives = 187/282 (66%), Gaps = 5/282 (1%)
Frame = +2
Query: 89 KMQTTNGSDSSLATPGATTPPPPQQWQQQQQQHWMAAMQYPGAAAMMMMQQQQMMMYPHQ 268
K+Q+ + S S PPPP QQ ++ P M+ ++ PHQ
Sbjct: 5 KIQSESESSDSHPVVDNQPPPPPPPPQQPAKEEENQPKTSP-TPPPHWMRYPPTVIIPHQ 63
Query: 269 --YVPYNYQQQQQHPHFQYASYQQQHKTHERGSGDDVKTLWIGDLLYWMDETYLHNCFS- 439
Y P + Q+P+ + +Q + H+ + KT+W+GDL +WMDE YL++ F+
Sbjct: 64 MMYAPPPFPPYHQYPNHHHLHHQSRGNKHQNAFNGENKTIWVGDLHHWMDEAYLNSSFAS 123
Query: 440 -HTGEVSSVKVIRNKLTCQSEGYGFVEFLSRAAAEEVLQNFNGSVMPNSEQLFRLNWASF 616
E+ SVKVIRNK SEGYGFVEF S A++VL+ FNG+ MPN++Q FRLNWASF
Sbjct: 124 GDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVLREFNGTTMPNTDQPFRLNWASF 183
Query: 617 STGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDSNTGRSKGYGF 796
STGEKR NGP+LSIFVGDLSPDV+D LL E F E+YPSVK+AKVV+D+NTGRSKGYGF
Sbjct: 184 STGEKRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGF 243
Query: 797 VRFGDENERSRALTEMNGAYCSNRQMRVGVATPKRAVANQQQ 922
VRFGDENER++A+TEMNG CS+R MR+G ATP++ QQQ
Sbjct: 244 VRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQQ 285
>gi|42571787|ref|NP_973984.1| RNA-binding protein 47C [Arabidopsis thaliana]
Length = 310
Score = 279 bits (712), Expect = 1e-072
Identities = 145/282 (51%), Positives = 187/282 (66%), Gaps = 5/282 (1%)
Frame = +2
Query: 89 KMQTTNGSDSSLATPGATTPPPPQQWQQQQQQHWMAAMQYPGAAAMMMMQQQQMMMYPHQ 268
K+Q+ + S S PPPP QQ ++ P M+ ++ PHQ
Sbjct: 5 KIQSESESSDSHPVVDNQPPPPPPPPQQPAKEEENQPKTSP-TPPPHWMRYPPTVIIPHQ 63
Query: 269 --YVPYNYQQQQQHPHFQYASYQQQHKTHERGSGDDVKTLWIGDLLYWMDETYLHNCFS- 439
Y P + Q+P+ + +Q + H+ + KT+W+GDL +WMDE YL++ F+
Sbjct: 64 MMYAPPPFPPYHQYPNHHHLHHQSRGNKHQNAFNGENKTIWVGDLHHWMDEAYLNSSFAS 123
Query: 440 -HTGEVSSVKVIRNKLTCQSEGYGFVEFLSRAAAEEVLQNFNGSVMPNSEQLFRLNWASF 616
E+ SVKVIRNK SEGYGFVEF S A++VL+ FNG+ MPN++Q FRLNWASF
Sbjct: 124 GDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVLREFNGTTMPNTDQPFRLNWASF 183
Query: 617 STGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDSNTGRSKGYGF 796
STGEKR NGP+LSIFVGDLSPDV+D LL E F E+YPSVK+AKVV+D+NTGRSKGYGF
Sbjct: 184 STGEKRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGF 243
Query: 797 VRFGDENERSRALTEMNGAYCSNRQMRVGVATPKRAVANQQQ 922
VRFGDENER++A+TEMNG CS+R MR+G ATP++ QQQ
Sbjct: 244 VRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQQ 285
>gi|15220241|ref|NP_175181.1| RNA-binding protein 47C' [Arabidopsis thaliana]
Length = 434
Score = 272 bits (693), Expect = 2e-070
Identities = 146/280 (52%), Positives = 183/280 (65%), Gaps = 7/280 (2%)
Frame = +2
Query: 146 PPPPQQWQQQQQQHWMAAMQYPGAAAMMMMQQQQMMMYPHQYVPYN-YQQQQQHPHFQYA 322
PP P ++ Q P + QMM P +P++ Y Q H HF +
Sbjct: 29 PPHPPVEVEENQPKTSPTPPPPHWMRYPPVLMPQMMYAPPPPMPFSPYHQYPNHHHFHHQ 88
Query: 323 SYQQQHKTHERGSGDDVKTLWIGDLLYWMDETYLHNCF--SHTGEVSSVKVIRNKLTCQS 496
S +H+ G KT+W+GDL WMDE YL++ F + E+ S+KVIRNK S
Sbjct: 89 SRGNKHQNAFNGEN---KTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSS 145
Query: 497 EGYGFVEFLSRAAAEEVLQNFNGSVMPNSEQLFRLNWASFSTGEKRAVENGPELSIFVGD 676
EGYGFVEF S A++VLQ FNG+ MPN++Q FRLNWASFSTGEKR NGP+LSIFVGD
Sbjct: 146 EGYGFVEFESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGD 205
Query: 677 LSPDVTDTLLQELFVERYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAY 856
L+PDV+D LL E F E+YPSVK+AKVV+D+NTGRSKGYGFVRFGDENER++A+TEMNG
Sbjct: 206 LAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVK 265
Query: 857 CSNRQMRVGVATPKRAVANQQQ-QHHPSQALILAGGHGAN 973
CS+R MR+G ATP++ QQQ + PS A + G N
Sbjct: 266 CSSRAMRIGPATPRKTNGYQQQGGYMPSGAFTRSEGDTIN 305
>gi|297792959|ref|XP_002864364.1| hypothetical protein ARALYDRAFT_495572
[Arabidopsis lyrata subsp. lyrata]
Length = 398
Score = 257 bits (655), Expect = 5e-066
Identities = 132/252 (52%), Positives = 164/252 (65%), Gaps = 5/252 (1%)
Frame = +2
Query: 200 MQYP-----GAAAMMMMQQQQMMMYPHQYVPYNYQQQQQHPHFQYASYQQQHKTHERGSG 364
MQ+P GA + QQQ +M Q QQQQQ QQQ+ + G
Sbjct: 1 MQHPPSNAAGAGQIPSGQQQLWIMMQQQQQQQQQQQQQQQRQSAALLGQQQYGVGSQNPG 60
Query: 365 DDVKTLWIGDLLYWMDETYLHNCFSHTGEVSSVKVIRNKLTCQSEGYGFVEFLSRAAAEE 544
+VK+LWIGDL WMDE Y+ + F+ +GE S KVIRNKLT QSEGYGF+EF++ + AE
Sbjct: 61 SEVKSLWIGDLQQWMDENYIMSVFNQSGEAQSAKVIRNKLTGQSEGYGFIEFINHSVAER 120
Query: 545 VLQNFNGSVMPNSEQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVE 724
VLQ +NG+ MP++EQ FRLNWA GEKR GP+ +IFVGDL+P+VTD +L + F
Sbjct: 121 VLQTYNGAQMPSTEQTFRLNWAQAGAGEKRHQTEGPDHTIFVGDLAPEVTDYMLSDTFKN 180
Query: 725 RYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATPKRA 904
Y SVK AKVV+D TGRSKGYGFVRF DENE+ RA+TEMNG YCS R MR+G A K A
Sbjct: 181 VYGSVKGAKVVVDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNA 240
Query: 905 VANQQQQHHPSQ 940
+ Q + +Q
Sbjct: 241 LPMQPAMYQNTQ 252
>gi|125558527|gb|EAZ04063.1| hypothetical protein OsI_26200 [Oryza sativa Indica
Group]
Length = 323
Score = 249 bits (635), Expect = 1e-063
Identities = 136/263 (51%), Positives = 168/263 (63%), Gaps = 6/263 (2%)
Frame = +2
Query: 149 PPPQQWQQQQQQHWMAAMQYPGAAAMMMMQQQQMMMYPHQYVPYNYQQQQQHP-HFQYAS 325
P P + Q H Q P Q P Q +QQ P H+
Sbjct: 48 PLPPHYYQAGPPHAPPPQQPPAMWGQPPPPPPQYAPPPPQQFQLPHQQYAPPPQHYAPPP 107
Query: 326 YQQQHKTHERG----SGDDVKTLWIGDLLYWMDETYLHNCFSHTG-EVSSVKVIRNKLTC 490
QQQ+ G GD++++LWIGDL YWMDE+YL N F+ G +V+SVKVIRNK +
Sbjct: 108 PQQQYGAQMAGGPAPGGDEIRSLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSG 167
Query: 491 QSEGYGFVEFLSRAAAEEVLQNFNGSVMPNSEQLFRLNWASFSTGEKRAVENGPELSIFV 670
SEGYGF+EF S AAAE L NFNG +M N +QLF+LNWAS GE+RA ++GPE +IFV
Sbjct: 168 HSEGYGFIEFQSHAAAEYALANFNGRMMLNVDQLFKLNWASSGAGERRAADDGPEHTIFV 227
Query: 671 GDLSPDVTDTLLQELFVERYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNG 850
GDL+ DVTD++L+E F YPSV+ AKVV D TGRSKGYGFVRFGDENE++RA+TEMNG
Sbjct: 228 GDLASDVTDSMLEEAFKTSYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNG 287
Query: 851 AYCSNRQMRVGVATPKRAVANQQ 919
A S RQMR+G A K+ + QQ
Sbjct: 288 ATLSTRQMRLGPAANKKNMGTQQ 310
>gi|125600441|gb|EAZ40017.1| hypothetical protein OsJ_24455 [Oryza sativa
Japonica Group]
Length = 323
Score = 249 bits (635), Expect = 1e-063
Identities = 136/263 (51%), Positives = 168/263 (63%), Gaps = 6/263 (2%)
Frame = +2
Query: 149 PPPQQWQQQQQQHWMAAMQYPGAAAMMMMQQQQMMMYPHQYVPYNYQQQQQHP-HFQYAS 325
P P + Q H Q P Q P Q +QQ P H+
Sbjct: 48 PLPPHYYQAGPPHAPPPQQPPAMWGQPPPPPPQYAPPPPQQFQLPHQQYAPPPQHYAPPP 107
Query: 326 YQQQHKTHERG----SGDDVKTLWIGDLLYWMDETYLHNCFSHTG-EVSSVKVIRNKLTC 490
QQQ+ G GD++++LWIGDL YWMDE+YL N F+ G +V+SVKVIRNK +
Sbjct: 108 PQQQYGAQMAGGPAPGGDEIRSLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSG 167
Query: 491 QSEGYGFVEFLSRAAAEEVLQNFNGSVMPNSEQLFRLNWASFSTGEKRAVENGPELSIFV 670
SEGYGF+EF S AAAE L NFNG +M N +QLF+LNWAS GE+RA ++GPE +IFV
Sbjct: 168 HSEGYGFIEFQSHAAAEYALANFNGRMMLNVDQLFKLNWASSGAGERRAADDGPEHTIFV 227
Query: 671 GDLSPDVTDTLLQELFVERYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNG 850
GDL+ DVTD++L+E F YPSV+ AKVV D TGRSKGYGFVRFGDENE++RA+TEMNG
Sbjct: 228 GDLASDVTDSMLEEAFKTSYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNG 287
Query: 851 AYCSNRQMRVGVATPKRAVANQQ 919
A S RQMR+G A K+ + QQ
Sbjct: 288 ATLSTRQMRLGPAANKKNMGTQQ 310
>gi|9758270|dbj|BAB08769.1| unnamed protein product [Arabidopsis thaliana]
Length = 390
Score = 249 bits (634), Expect = 1e-063
Identities = 129/243 (53%), Positives = 158/243 (65%), Gaps = 4/243 (1%)
Frame = +2
Query: 212 GAAAMMMMQQQQMMMYPHQYVPYNYQQQQQHPHFQYASYQQQHKTHERGSGDDVKTLWIG 391
GA + QQ MM Q QQQ Q +Q + GS DVK+LWIG
Sbjct: 10 GAGQIPSGQQHLWMMMQQQ----QQQQQMQLSAAPLGQHQYGIGSQNPGSASDVKSLWIG 65
Query: 392 DLLYWMDETYLHNCFSHTGEVSSVKVIRNKLTCQSEGYGFVEFLSRAAAEEVLQNFNGSV 571
DL WMDE Y+ + F+ +GE +S KVIRNKLT QSEGYGF+EF+S + AE VLQ +NG+
Sbjct: 66 DLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQTYNGAP 125
Query: 572 MPNSEQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAK 751
MP++EQ FRLNWA GEKR GP+ +IFVGDL+P+VTD +L + F Y SVK AK
Sbjct: 126 MPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAK 185
Query: 752 VVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATPKRAVANQQQQHH 931
VV+D TGRSKGYGFVRF DENE+ RA+TEMNG YCS R MR+G A K A+ Q +
Sbjct: 186 VVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQ 245
Query: 932 PSQ 940
+Q
Sbjct: 246 NTQ 248
>gi|18423684|ref|NP_568815.1| RNA-binding protein 45A [Arabidopsis thaliana]
Length = 387
Score = 249 bits (634), Expect = 1e-063
Identities = 129/243 (53%), Positives = 158/243 (65%), Gaps = 4/243 (1%)
Frame = +2
Query: 212 GAAAMMMMQQQQMMMYPHQYVPYNYQQQQQHPHFQYASYQQQHKTHERGSGDDVKTLWIG 391
GA + QQ MM Q QQQ Q +Q + GS DVK+LWIG
Sbjct: 10 GAGQIPSGQQHLWMMMQQQ----QQQQQMQLSAAPLGQHQYGIGSQNPGSASDVKSLWIG 65
Query: 392 DLLYWMDETYLHNCFSHTGEVSSVKVIRNKLTCQSEGYGFVEFLSRAAAEEVLQNFNGSV 571
DL WMDE Y+ + F+ +GE +S KVIRNKLT QSEGYGF+EF+S + AE VLQ +NG+
Sbjct: 66 DLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQTYNGAP 125
Query: 572 MPNSEQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAK 751
MP++EQ FRLNWA GEKR GP+ +IFVGDL+P+VTD +L + F Y SVK AK
Sbjct: 126 MPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAK 185
Query: 752 VVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATPKRAVANQQQQHH 931
VV+D TGRSKGYGFVRF DENE+ RA+TEMNG YCS R MR+G A K A+ Q +
Sbjct: 186 VVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQ 245
Query: 932 PSQ 940
+Q
Sbjct: 246 NTQ 248
>gi|34395215|dbj|BAC83714.1| RNA Binding Protein-like [Oryza sativa Japonica
Group]
Length = 206
Score = 243 bits (618), Expect = 1e-061
Identities = 119/187 (63%), Positives = 147/187 (78%), Gaps = 1/187 (0%)
Frame = +2
Query: 362 GDDVKTLWIGDLLYWMDETYLHNCFSHTG-EVSSVKVIRNKLTCQSEGYGFVEFLSRAAA 538
GD++++LWIGDL YWMDE+YL N F+ G +V+SVKVIRNK + SEGYGF+EF S AAA
Sbjct: 9 GDEIRSLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSGHSEGYGFIEFQSHAAA 68
Query: 539 EEVLQNFNGSVMPNSEQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELF 718
E L NFNG +M N +QLF+LNWAS GE+RA ++GPE +IFVGDL+ DVTD++L+E F
Sbjct: 69 EYALANFNGRMMLNVDQLFKLNWASSGAGERRAADDGPEHTIFVGDLASDVTDSMLEEAF 128
Query: 719 VERYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATPK 898
YPSV+ AKVV D TGRSKGYGFVRFGDENE++RA+TEMNGA S RQMR+G A K
Sbjct: 129 KTSYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGATLSTRQMRLGPAANK 188
Query: 899 RAVANQQ 919
+ + QQ
Sbjct: 189 KNMGTQQ 195
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 748,178,612,197
Number of Sequences: 15229318
Number of Extensions: 748178612197
Number of Successful Extensions: 201585142
Number of sequences better than 0.0: 0
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