BLASTX 7.6.2
Query= UN06411 /QuerySize=1579
(1578 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O60176|YG41_SCHPO Uncharacterized RNA-binding protein C23E6.0... 229 6e-059
sp|O13759|CSX1_SCHPO RNA-binding post-transcriptional regulator ... 201 2e-050
sp|Q1RMJ7|TSAP1_BOVIN tRNA selenocysteine 1-associated protein 1... 151 1e-035
sp|Q9NX07|TSAP1_HUMAN tRNA selenocysteine 1-associated protein 1... 151 1e-035
sp|Q5R462|TSAP1_PONAB tRNA selenocysteine 1-associated protein 1... 150 4e-035
sp|Q9QZI7|TSAP1_RAT tRNA selenocysteine 1-associated protein 1 O... 150 4e-035
sp|Q80VC6|TSAP1_MOUSE tRNA selenocysteine 1-associated protein 1... 149 5e-035
sp|Q01085|TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 P... 140 4e-032
sp|P32831|NGR1_YEAST Negative growth regulatory protein NGR1 OS=... 111 3e-023
sp|Q00539|NAM8_YEAST Protein NAM8 OS=Saccharomyces cerevisiae GN... 107 4e-022
sp|Q86U06|RBM23_HUMAN Probable RNA-binding protein 23 OS=Homo sa... 80 3e-014
sp|Q14498|RBM39_HUMAN RNA-binding protein 39 OS=Homo sapiens GN=... 77 4e-013
sp|Q8VH51|RBM39_MOUSE RNA-binding protein 39 OS=Mus musculus GN=... 77 4e-013
sp|Q5RC80|RBM39_PONAB RNA-binding protein 39 OS=Pongo abelii GN=... 77 4e-013
sp|Q6DRG1|RBM42_DANRE RNA-binding protein 42 OS=Danio rerio GN=r... 74 3e-012
sp|Q66KL9|RBM42_XENTR RNA-binding protein 42 OS=Xenopus tropical... 73 6e-012
sp|A2VDB3|RBM42_XENLA RNA-binding protein 42 OS=Xenopus laevis G... 72 1e-011
sp|Q0P5L0|RBM42_BOVIN RNA-binding protein 42 OS=Bos taurus GN=RB... 70 5e-011
>sp|O60176|YG41_SCHPO Uncharacterized RNA-binding protein C23E6.01c
OS=Schizosaccharomyces pombe GN=SPBC23E6.01c PE=1 SV=2
Length = 473
Score = 229 bits (582), Expect = 6e-059
Identities = 125/291 (42%), Positives = 173/291 (59%), Gaps = 9/291 (3%)
Frame = +2
Query: 377 TLWIGDLLYWMDETYLHNCFSHTGEVSSVKVIRNKLTCQSEGYGFVEFLSRAAAEEVLQN 556
TLW+G+L W+ E ++ ++ G+ VK+IRN+ T + GY FVEF S A + +
Sbjct: 94 TLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSAM-S 152
Query: 557 FNGSVMPNSEQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYPS 736
N +P + LF+LNWAS ++++ E SIFVGDLSP+V + + LF RY S
Sbjct: 153 MNNKPIPGTNHLFKLNWASGGGLREKSISKASEYSIFVGDLSPNVNEFDVYSLFASRYNS 212
Query: 737 VKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATPKRAVANQ 916
KSAK++ D T S+GYGFVRF DEN++ AL EM G C +R +RVG+ATPK
Sbjct: 213 CKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRVGLATPK------ 266
Query: 917 QQQHHPSQALILAGGHGANGY--MAHGSQSDG*SNNSTIFVGGIDPDVTEEDLRQPFSQV 1090
+ H S ++ G+ A + NST+FVGG+ V+EE+L+ F
Sbjct: 267 SKAHVFSPVNVVPVSMPPVGFYSAAQPVPQFADTANSTVFVGGLSKFVSEEELKYLFQNF 326
Query: 1091 GEVVSVKIPVGKGCGFVQLANRKSADDAIQSLNGTVIGKNTVRLSWGRSPN 1243
GE+V VKIP GKGCGFVQ NR+SA+ AI L G +G + +RLSWGR+ N
Sbjct: 327 GEIVYVKIPPGKGCGFVQFVNRQSAEIAINQLQGYPLGNSRIRLSWGRNQN 377
>sp|O13759|CSX1_SCHPO RNA-binding post-transcriptional regulator csx1
OS=Schizosaccharomyces pombe GN=csx1 PE=1 SV=1
Length = 632
Score = 201 bits (509), Expect = 2e-050
Identities = 113/298 (37%), Positives = 168/298 (56%), Gaps = 25/298 (8%)
Frame = +2
Query: 377 TLWIGDLLYWMDETYLHNCFSHTGEVSSVKVIRNKLTCQSE--GYGFVEFLSRAAAEEVL 550
TLW+GDL WMD T++ ++ E +VKV+R+K + Y FV+F S AAAE L
Sbjct: 86 TLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSSETLISYCFVQFSSSAAAERAL 145
Query: 551 QNFNGSVMPNSEQLFRLNWAS-FSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVER 727
+N +++P + F+LNWA+ V PE SIFVGDL P D+ L F
Sbjct: 146 MKYNNTMIPGAHCTFKLNWATGGGIQHNNFVSRDPEFSIFVGDLLPTTEDSDLFMTFRSI 205
Query: 728 YPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATPKRAV 907
YPS SAK+++D TG S+ YGFVRF E E+ AL M G C R +R+ VA+PK
Sbjct: 206 YPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQGYLCQGRPLRISVASPK--- 262
Query: 908 ANQQQQHHPSQALILAGGHGANGYMAHGSQSDG*SN--------NSTIFVGGIDPDVTEE 1063
S+A I A A G + + + + N+T+FVGG+ +++E+
Sbjct: 263 ---------SRASIAA--DSALGIVPTSTSNRQPNQDLCSMDPLNTTVFVGGLASNLSEK 311
Query: 1064 DLRQPFSQVGEVVSVKIPVGKGCGFVQLANRKSADDAIQSLNGTVIGKNTVRLSWGRS 1237
DL+ F G ++++KIP GKGCGFVQ + + +A+ AI ++ G ++G + +RL+WG +
Sbjct: 312 DLQVCFQPFGRILNIKIPFGKGCGFVQYSEKSAAEKAINTMQGALVGTSHIRLAWGHN 369
>sp|Q1RMJ7|TSAP1_BOVIN tRNA selenocysteine 1-associated protein 1 OS=Bos taurus
GN=TRNAU1AP PE=2 SV=1
Length = 287
Score = 151 bits (381), Expect = 1e-035
Identities = 86/178 (48%), Positives = 116/178 (65%), Gaps = 9/178 (5%)
Frame = +2
Query: 377 TLWIGDLLYWMDETYLHNCFSHTGE-VSSVKVIRNKLTCQSEGYGFVEFLSRAAAEEVLQ 553
+LW+GDL +MDE ++ F+ GE V SVK+IRN+LT GY FVEF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 554 NFNGSVMPNS--EQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVER 727
NG +P + + F+LN+A++ + +N PE S+FVGDL+PDV D +L E FV+
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG----KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKV 119
Query: 728 YPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAY-CSNRQMRVGVATPK 898
YPS + KVV+D TG SKGYGFV+F DE E+ RALTE GA ++ +R+ VA PK
Sbjct: 120 YPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRALTECQGAIGLGSKPVRLSVAIPK 176
>sp|Q9NX07|TSAP1_HUMAN tRNA selenocysteine 1-associated protein 1 OS=Homo
sapiens GN=TRNAU1AP PE=1 SV=1
Length = 287
Score = 151 bits (381), Expect = 1e-035
Identities = 86/178 (48%), Positives = 116/178 (65%), Gaps = 9/178 (5%)
Frame = +2
Query: 377 TLWIGDLLYWMDETYLHNCFSHTGE-VSSVKVIRNKLTCQSEGYGFVEFLSRAAAEEVLQ 553
+LW+GDL +MDE ++ F+ GE V SVK+IRN+LT GY FVEF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 554 NFNGSVMPNS--EQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVER 727
NG +P + + F+LN+A++ + +N PE S+FVGDL+PDV D +L E FV+
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG----KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKV 119
Query: 728 YPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAY-CSNRQMRVGVATPK 898
YPS + KVV+D TG SKGYGFV+F DE E+ RALTE GA ++ +R+ VA PK
Sbjct: 120 YPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPK 176
>sp|Q5R462|TSAP1_PONAB tRNA selenocysteine 1-associated protein 1 OS=Pongo
abelii GN=TRNAU1AP PE=2 SV=1
Length = 287
Score = 150 bits (377), Expect = 4e-035
Identities = 85/178 (47%), Positives = 115/178 (64%), Gaps = 9/178 (5%)
Frame = +2
Query: 377 TLWIGDLLYWMDETYLHNCFSHTGE-VSSVKVIRNKLTCQSEGYGFVEFLSRAAAEEVLQ 553
+LW+GDL +MDE ++ F+ GE V SVK+IRN+LT GY FVEF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 554 NFNGSVMPNS--EQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVER 727
NG +P + + F+LN+ ++ + +N PE S+FVGDL+PDV D +L E FV+
Sbjct: 64 KINGKPLPGATPAKRFKLNYVTYG----KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKV 119
Query: 728 YPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAY-CSNRQMRVGVATPK 898
YPS + KVV+D TG SKGYGFV+F DE E+ RALTE GA ++ +R+ VA PK
Sbjct: 120 YPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPK 176
>sp|Q9QZI7|TSAP1_RAT tRNA selenocysteine 1-associated protein 1 OS=Rattus
norvegicus GN=Trnau1ap PE=1 SV=1
Length = 287
Score = 150 bits (377), Expect = 4e-035
Identities = 86/178 (48%), Positives = 115/178 (64%), Gaps = 9/178 (5%)
Frame = +2
Query: 377 TLWIGDLLYWMDETYLHNCFSHTGE-VSSVKVIRNKLTCQSEGYGFVEFLSRAAAEEVLQ 553
+LW+GDL +MDE ++ F+ GE V SVK+IRN+LT GY FVEF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 554 NFNGSVMPNS--EQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVER 727
NG +P + + F+LN+A++ + +N PE S+FVGDL+PDV D +L E FV+
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG----KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKV 119
Query: 728 YPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAY-CSNRQMRVGVATPK 898
YPS + KVV+D TG SKGYGFV+F DE E+ RALTE GA + +R+ VA PK
Sbjct: 120 YPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRLSVAIPK 176
>sp|Q80VC6|TSAP1_MOUSE tRNA selenocysteine 1-associated protein 1 OS=Mus
musculus GN=Trnau1ap PE=1 SV=2
Length = 287
Score = 149 bits (376), Expect = 5e-035
Identities = 86/178 (48%), Positives = 115/178 (64%), Gaps = 9/178 (5%)
Frame = +2
Query: 377 TLWIGDLLYWMDETYLHNCFSHTGE-VSSVKVIRNKLTCQSEGYGFVEFLSRAAAEEVLQ 553
+LW+GDL +MDE ++ F+ GE V SVK+IRN+LT GY FVEF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 554 NFNGSVMPNS--EQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVER 727
NG +P + + F+LN+A++ + +N PE S+FVGDL+PDV D +L E FV+
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG----KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKV 119
Query: 728 YPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAY-CSNRQMRVGVATPK 898
YPS + KVV+D TG SKGYGFV+F DE E+ RALTE GA + +R+ VA PK
Sbjct: 120 YPSCRGGKVVLDP-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRLSVAIPK 176
>sp|Q01085|TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=1
Length = 375
Score = 140 bits (351), Expect = 4e-032
Identities = 98/324 (30%), Positives = 154/324 (47%), Gaps = 30/324 (9%)
Frame = +2
Query: 374 KTLWIGDLLYWMDETYLHNCFSHTGEVSSVKVIRNKLTCQSEGYGFVEFLSRAAAEEVLQ 553
+TL++G+L + E + FS G S K+I + ++ Y FVEF A L
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTS--NDPYCFVEFYEHRDAAAALA 66
Query: 554 NFNGSVMPNSEQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYP 733
NG + E ++NWA+ + +K+ N +FVGDLSP++T ++ F +
Sbjct: 67 AMNGRKILGKE--VKVNWATTPSSQKKDTSN--HFHVFVGDLSPEITTEDIKSAFAP-FG 121
Query: 734 SVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATPKRAVAN 913
+ A+VV D TG+SKGYGFV F ++ + A+ M G + RQ+R AT K
Sbjct: 122 KISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPK 181
Query: 914 QQQQHHPSQALILAGGHGANGYMAHGSQSDG*SNNSTIFVGGIDPDVTEEDLRQPFSQVG 1093
Q+++ Q + N T++ GGI +T++ +RQ FS G
Sbjct: 182 STQENNTKQLRF------------EDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFG 229
Query: 1094 EVVSVKIPVGKGCGFVQLANRKSADDAIQSLNGTVIGKNTVRLSWGR-SPN--------- 1243
+++ +++ KG FV+ + +SA AI S+NGT I + V+ WG+ SP+
Sbjct: 230 QIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVD 289
Query: 1244 -KQWRGDSGQQWNGAQRGQGCNNG 1312
QW S N Q GQ NG
Sbjct: 290 YSQWGQWSQVYGNPQQYGQYMANG 313
>sp|P32831|NGR1_YEAST Negative growth regulatory protein NGR1 OS=Saccharomyces
cerevisiae GN=NGR1 PE=1 SV=2
Length = 672
Score = 111 bits (275), Expect = 3e-023
Identities = 58/127 (45%), Positives = 80/127 (62%), Gaps = 1/127 (0%)
Frame = +2
Query: 560 NGSVMPNSEQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSV 739
N P ++ FRLNWAS +T + ++ + PE S+FVGDLSP T+ L LF R+ SV
Sbjct: 161 NSQTNPTFKRTFRLNWASGATLQS-SIPSTPEFSLFVGDLSPTATEADLLSLFQTRFKSV 219
Query: 740 KSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATPKRAVANQQ 919
K+ +V+ D TG S+ +GFVRFGDE+ER RAL EM+G + R +RV ATP+ + Q
Sbjct: 220 KTVRVMTDPLTGSSRCFGFVRFGDEDERRRALIEMSGKWFQGRALRVAYATPRNNMMLQL 279
Query: 920 QQHHPSQ 940
Q+ Q
Sbjct: 280 QEQQQQQ 286
Score = 79 bits (192), Expect = 1e-013
Identities = 36/83 (43%), Positives = 53/83 (63%)
Frame = +2
Query: 1016 NSTIFVGGIDPDVTEEDLRQPFSQVGEVVSVKIPVGKGCGFVQLANRKSADDAIQSLNGT 1195
N+T+FVGG+ P TE LR F G +++V+IP GK CGFV+ R A+ +IQ L G
Sbjct: 359 NTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGLQGF 418
Query: 1196 VIGKNTVRLSWGRSPNKQWRGDS 1264
++G + +RLSWGR + + +S
Sbjct: 419 IVGGSPIRLSWGRPSSSNAKTNS 441
>sp|Q00539|NAM8_YEAST Protein NAM8 OS=Saccharomyces cerevisiae GN=NAM8 PE=1
SV=2
Length = 523
Score = 107 bits (265), Expect = 4e-022
Identities = 64/150 (42%), Positives = 89/150 (59%), Gaps = 13/150 (8%)
Frame = +2
Query: 494 SEGYGFVEFLSRAAAEEVLQNFNGSVMPN-SEQLFRLNWA----SFSTGEKRAVENGPEL 658
++GY FV+F S A L NG ++PN + +LNWA S S V++G
Sbjct: 105 NQGYCFVDFPSSTHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNC 163
Query: 659 SIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALT 838
SIFVGDL+P+VT++ L ELF+ RY S AK+V D TG SKGYGFV+F + +E+ AL+
Sbjct: 164 SIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALS 223
Query: 839 EMNGAYCSNRQMRVGVATPKRAVANQQQQH 928
EM G + + R ++VG + QQQH
Sbjct: 224 EMQGVFLNGRAIKVG-------PTSGQQQH 246
Score = 84 bits (207), Expect = 2e-015
Identities = 41/75 (54%), Positives = 52/75 (69%)
Frame = +2
Query: 1013 NNSTIFVGGIDPDVTEEDLRQPFSQVGEVVSVKIPVGKGCGFVQLANRKSADDAIQSLNG 1192
NN+T+F+GG+ VTE++LR F G +V VKIPVGK CGFVQ +R SA+ AI + G
Sbjct: 311 NNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCCGFVQYVDRLSAEAAIAGMQG 370
Query: 1193 TVIGKNTVRLSWGRS 1237
I + VRLSWGRS
Sbjct: 371 FPIANSRVRLSWGRS 385
>sp|Q86U06|RBM23_HUMAN Probable RNA-binding protein 23 OS=Homo sapiens GN=RBM23
PE=1 SV=1
Length = 439
Score = 80 bits (197), Expect = 3e-014
Identities = 58/212 (27%), Positives = 107/212 (50%), Gaps = 9/212 (4%)
Frame = +2
Query: 278 YNYQQQQQHPHFQYASYQQQHKTHERGSGDDVKTLWIGDLLYWMDETYLHNCFSHTGEVS 457
Y Y + PHF+ S ++ + D +T++ L + L + FS G+V
Sbjct: 135 YRYGHSKS-PHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVR 193
Query: 458 SVKVIRNKLTCQSEGYGFVEFLSRAAAEEVL----QNFNG-SVMPNSEQLFRLNWASFST 622
V++I ++ + +S+G +VEF + + Q G ++ + Q + A+ +
Sbjct: 194 DVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMAN 253
Query: 623 GEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDSNTGRSKGYGFVR 802
++ NG + ++VG L ++T+ +L+ +F E + + + ++ DS+TGRSKGYGF+
Sbjct: 254 NLQKG--NGGPMRLYVGSLHFNITEDMLRGIF-EPFGKIDNIVLMKDSDTGRSKGYGFIT 310
Query: 803 FGDENERSRALTEMNGAYCSNRQMRVGVATPK 898
F D RAL ++NG + R MRVG T +
Sbjct: 311 FSDSECARRALEQLNGFELAGRPMRVGHVTER 342
>sp|Q14498|RBM39_HUMAN RNA-binding protein 39 OS=Homo sapiens GN=RBM39 PE=1
SV=2
Length = 530
Score = 77 bits (187), Expect = 4e-013
Identities = 51/181 (28%), Positives = 94/181 (51%), Gaps = 6/181 (3%)
Frame = +2
Query: 368 DVKTLWIGDLLYWMDETYLHNCFSHTGEVSSVKVIRNKLTCQSEGYGFVEFLSRAAAEEV 547
D +T++ L + L FS G+V V++I ++ + +S+G +VEF+ ++
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 210
Query: 548 L----QNFNGSVMPNSEQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQEL 715
+ Q G + N A+ + GP + ++VG L ++T+ +L+ +
Sbjct: 211 IGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGP-MRLYVGSLHFNITEDMLRGI 269
Query: 716 FVERYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATP 895
F E + ++S ++++DS TGRSKGYGF+ F D +AL ++NG + R M+VG T
Sbjct: 270 F-EPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTE 328
Query: 896 K 898
+
Sbjct: 329 R 329
>sp|Q8VH51|RBM39_MOUSE RNA-binding protein 39 OS=Mus musculus GN=Rbm39 PE=1
SV=1
Length = 530
Score = 77 bits (187), Expect = 4e-013
Identities = 53/181 (29%), Positives = 92/181 (50%), Gaps = 6/181 (3%)
Frame = +2
Query: 368 DVKTLWIGDLLYWMDETYLHNCFSHTGEVSSVKVIRNKLTCQSEGYGFVEFLS----RAA 535
D +T++ L + L FS G+V V++I ++ + +S G +VEF+ R A
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSRGIAYVEFVDVSSVRLA 210
Query: 536 AEEVLQNFNGSVMPNSEQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQEL 715
Q G + N A+ + GP + ++VG L ++T+ +L+ +
Sbjct: 211 IGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGP-MRLYVGSLHFNITEDMLRGI 269
Query: 716 FVERYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATP 895
F E + ++S ++++DS TGRSKGYGF+ F D +AL ++NG + R M+VG T
Sbjct: 270 F-EPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTE 328
Query: 896 K 898
+
Sbjct: 329 R 329
>sp|Q5RC80|RBM39_PONAB RNA-binding protein 39 OS=Pongo abelii GN=RBM39 PE=2
SV=1
Length = 524
Score = 77 bits (187), Expect = 4e-013
Identities = 51/181 (28%), Positives = 94/181 (51%), Gaps = 6/181 (3%)
Frame = +2
Query: 368 DVKTLWIGDLLYWMDETYLHNCFSHTGEVSSVKVIRNKLTCQSEGYGFVEFLSRAAAEEV 547
D +T++ L + L FS G+V V++I ++ + +S+G +VEF+ ++
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 210
Query: 548 L----QNFNGSVMPNSEQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQEL 715
+ Q G + N A+ + GP + ++VG L ++T+ +L+ +
Sbjct: 211 IGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGP-MRLYVGSLHFNITEDMLRGI 269
Query: 716 FVERYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATP 895
F E + ++S ++++DS TGRSKGYGF+ F D +AL ++NG + R M+VG T
Sbjct: 270 F-EPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTE 328
Query: 896 K 898
+
Sbjct: 329 R 329
>sp|Q6DRG1|RBM42_DANRE RNA-binding protein 42 OS=Danio rerio GN=rbm42 PE=2 SV=2
Length = 402
Score = 74 bits (179), Expect = 3e-012
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Frame = +2
Query: 653 ELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRA 832
+ IF GDL +V D +L F RYPS AKVV D TG++KGYGFV F D N+ RA
Sbjct: 302 DFRIFCGDLGNEVNDDILARAF-SRYPSFLKAKVVRDKRTGKTKGYGFVSFKDPNDYVRA 360
Query: 833 LTEMNGAYCSNRQMRV 880
+ EMNG Y +R +++
Sbjct: 361 MREMNGRYVGSRPIKL 376
>sp|Q66KL9|RBM42_XENTR RNA-binding protein 42 OS=Xenopus tropicalis GN=rbm42
PE=2 SV=1
Length = 392
Score = 73 bits (177), Expect = 6e-012
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Frame = +2
Query: 653 ELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRA 832
+ IF GDL +V D +L F RYPS AKV+ D TG++KGYGFV F D N+ RA
Sbjct: 292 DFRIFCGDLGNEVNDDILARAF-SRYPSFLRAKVIRDKRTGKTKGYGFVSFKDPNDYVRA 350
Query: 833 LTEMNGAYCSNRQMRV 880
+ EMNG Y +R +++
Sbjct: 351 MREMNGKYVGSRPIKL 366
>sp|A2VDB3|RBM42_XENLA RNA-binding protein 42 OS=Xenopus laevis GN=rbm42 PE=2
SV=1
Length = 392
Score = 72 bits (174), Expect = 1e-011
Identities = 36/76 (47%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Frame = +2
Query: 653 ELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRA 832
+ IF GDL +V D +L F RYPS AKV+ D TG++KGYGFV F D N+ RA
Sbjct: 292 DFRIFCGDLGNEVNDDILARAF-SRYPSFLRAKVIRDKRTGKTKGYGFVSFKDPNDYVRA 350
Query: 833 LTEMNGAYCSNRQMRV 880
EMNG Y +R +++
Sbjct: 351 TREMNGKYVGSRPIKL 366
>sp|Q0P5L0|RBM42_BOVIN RNA-binding protein 42 OS=Bos taurus GN=RBM42 PE=2 SV=1
Length = 448
Score = 70 bits (169), Expect = 5e-011
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Frame = +2
Query: 653 ELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRA 832
+ IF GDL +V D +L F R+PS AKV+ D TG++KGYGFV F D ++ RA
Sbjct: 348 DFRIFCGDLGNEVNDDILARAF-SRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRA 406
Query: 833 LTEMNGAYCSNRQMRV 880
+ EMNG Y +R +++
Sbjct: 407 MREMNGKYVGSRPIKL 422
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,099,029,888
Number of Sequences: 518415
Number of Extensions: 26099029888
Number of Successful Extensions: 175876120
Number of sequences better than 0.0: 0
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