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TAIR blast output of UN06411


BLASTX 7.6.2

Query= UN06411 /QuerySize=1579
        (1578 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G19130.1 | Symbols: ATRBP47B | ATRBP47B (RNA-b...    720   8e-208
TAIR9_protein||AT1G49600.1 | Symbols: ATRBP47A | ATRBP47A (Arabi...    612   2e-175
TAIR9_protein||AT5G19350.1 | Symbols:  | RNA-binding protein 45 ...    330   1e-090
TAIR9_protein||AT5G19350.2 | Symbols:  | RNA-binding protein 45 ...    328   9e-090
TAIR9_protein||AT1G47490.2 | Symbols: ATRBP47C | ATRBP47C (ARABI...    279   5e-075
TAIR9_protein||AT1G47490.1 | Symbols: ATRBP47C | ATRBP47C (ARABI...    279   5e-075
TAIR9_protein||AT1G47500.1 | Symbols: ATRBP47C' | ATRBP47C' (RNA...    272   8e-073
TAIR9_protein||AT5G54900.1 | Symbols: ATRBP45A | ATRBP45A (RNA-b...    249   5e-066
TAIR9_protein||AT1G11650.2 | Symbols: ATRBP45B, RBP45B | RNA-bin...    240   3e-063
TAIR9_protein||AT1G11650.1 | Symbols: ATRBP45B, RBP45B | RNA-bin...    240   3e-063
TAIR9_protein||AT4G27000.1 | Symbols: ATRBP45C | ATRBP45C; RNA b...    234   2e-061

>TAIR9_protein||AT3G19130.1 | Symbols: ATRBP47B | ATRBP47B (RNA-binding protein
        47B); RNA binding | chr3:6611398-6613823 REVERSE

          Length = 436

 Score =  720 bits (1857), Expect = 8e-208
 Identities = 363/438 (82%), Positives = 386/438 (88%), Gaps = 17/438 (3%)
 Frame = +2

Query:   92 MQTTNGSDSSLATPGAT-----TPPPPQQW--QQQQQQHWMAAMQYPGAAAMMMMQQQQM 250
            MQTTNGSDS+LAT GAT     TPPPPQQW  QQQQQQ WMAAMQYP AAAMMMMQQQQM
Sbjct:    1 MQTTNGSDSTLATSGATPPNQQTPPPPQQWQQQQQQQQQWMAAMQYPPAAAMMMMQQQQM 60

Query:  251 MMYPHQYVPYNY-QQQQQHPHF-QYASYQ----QQHKTHERGSGDDVKTLWIGDLLYWMD 412
            +MYPHQYVPYN    QQ HP   QY SYQ    QQHK  +RGSGDDVKTLW+GDLL+WMD
Sbjct:   61 LMYPHQYVPYNQGPYQQHHPQLHQYGSYQQHQHQQHKAIDRGSGDDVKTLWVGDLLHWMD 120

Query:  413 ETYLHNCFSHTGEVSSVKVIRNKLTCQSEGYGFVEFLSRAAAEEVLQNFNGSVMPNSEQL 592
            ETYLH+CFSHTGEVSSVKVIRNKLT QSEGYGFVEFLSRAAAEEVLQN++GSVMPNS+Q 
Sbjct:  121 ETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSDQP 180

Query:  593 FRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDSNT 772
            FR+NWASFSTGEKRAVENGP+LS+FVGDLSPDVTD LL E F +RYPSVKSAKVVIDSNT
Sbjct:  181 FRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNT 240

Query:  773 GRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATPKRAVANQQQQHHPSQALIL 952
            GRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVG+ATPKRA+ANQQQ  H SQA+IL
Sbjct:  241 GRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKRAIANQQQ--HSSQAVIL 298

Query:  953 AGGHGANGYMAHGSQSDG*SNNSTIFVGGIDPDVTEEDLRQPFSQVGEVVSVKIPVGKGC 1132
            AGGHG+NG M +GSQSDG S N+TIFVGGIDPDV +EDLRQPFSQ GEVVSVKIPVGKGC
Sbjct:  299 AGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGC 358

Query: 1133 GFVQLANRKSADDAIQSLNGTVIGKNTVRLSWGRSPNKQWRGDSGQQWNGA-QRGQGCNN 1309
            GFVQ A+RKSA+DAI+SLNGTVIGKNTVRLSWGRSPNKQWRGDSGQQWNG   RG G NN
Sbjct:  359 GFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSPNKQWRGDSGQQWNGGYSRGHGYNN 418

Query: 1310 -GGYANHHDSNTYPAET* 1360
             GGYANHHDSN Y  E *
Sbjct:  419 GGGYANHHDSNNYHGEN* 436

>TAIR9_protein||AT1G49600.1 | Symbols: ATRBP47A | ATRBP47A (Arabidopsis thaliana
        RNA-binding protein 47a); RNA binding | chr1:18357236-18360150 REVERSE

          Length = 446

 Score =  612 bits (1577), Expect = 2e-175
 Identities = 316/414 (76%), Positives = 340/414 (82%), Gaps = 21/414 (5%)
 Frame = +2

Query:  140 TTPPPPQQWQQ--QQQQHWMAAMQYPGAAAMMMMQQQQMMMYPH-QYVPYNYQQQQQHPH 310
            +TPPP QQ QQ  QQQQ WMAAMQ   AAAM MMQQQQMMMYPH QY PYN    QQHP 
Sbjct:   30 STPPPQQQQQQQWQQQQQWMAAMQQYPAAAMAMMQQQQMMMYPHPQYAPYNQAAYQQHPQ 89

Query:  311 FQYASYQQQHKTHER--------GSGDDVKTLWIGDLLYWMDETYLHNCFSHTGEVSSVK 466
            FQYA+YQQQ + H +          GDDVKTLW+GDLL+WMDETYLH CFSHT EVSSVK
Sbjct:   90 FQYAAYQQQQQQHHQSQQQPRGGSGGDDVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVK 149

Query:  467 VIRNKLTCQSEGYGFVEFLSRAAAEEVLQNFNGSVMPNSEQLFRLNWASFSTGEKRAVEN 646
            VIRNK TCQSEGYGFVEFLSR+AAEE LQ+F+G  MPN+EQ FRLNWASFSTGEKRA EN
Sbjct:  150 VIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGEKRASEN 209

Query:  647 GPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERS 826
            GP+LSIFVGDL+PDV+D +L E F  RYPSVK AKVVIDSNTGRSKGYGFVRFGDENERS
Sbjct:  210 GPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERS 269

Query:  827 RALTEMNGAYCSNRQMRVGVATPKRAVANQQQQHHPSQALILAGGHGANGYMAHGSQSDG 1006
            RA+TEMNGA+CS+RQMRVG+ATPKRA A  QQ  + SQAL LAGGHG N     GS SDG
Sbjct:  270 RAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQ--NGSQALTLAGGHGGN-----GSMSDG 322

Query: 1007 *SNNSTIFVGGIDPDVTEEDLRQPFSQVGEVVSVKIPVGKGCGFVQLANRKSADDAIQSL 1186
             SNNSTIFVGG+D DVTEEDL QPFS  GEVVSVKIPVGKGCGFVQ ANR+SA++AI +L
Sbjct:  323 ESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNL 382

Query: 1187 NGTVIGKNTVRLSWGRSPNKQWRGDSGQQWNGA-QRGQGCNNGGYANHHDSNTY 1345
            NGTVIGKNTVRLSWGRSPNKQWR DSG QWNG   RGQG NN GYAN  DSN Y
Sbjct:  383 NGTVIGKNTVRLSWGRSPNKQWRSDSGNQWNGGYSRGQGYNN-GYAN-QDSNMY 434

>TAIR9_protein||AT5G19350.1 | Symbols:  | RNA-binding protein 45 (RBP45),
        putative | chr5:6518978-6521295 FORWARD

          Length = 426

 Score =  330 bits (846), Expect = 1e-090
 Identities = 174/340 (51%), Positives = 227/340 (66%), Gaps = 5/340 (1%)
 Frame = +2

Query:  335 QHKTHERGSGDDVKTLWIGDLLYWMDETYLHNCFSHTGEVSSVKVIRNKLTCQSEGYGFV 514
            Q   H   + ++V+TLWIGDL YW+DE YL +CFS TGE+ SVKVIRNK+T Q EGYGF+
Sbjct:   11 QGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFI 70

Query:  515 EFLSRAAAEEVLQNFNGSVMPNSEQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVT 694
            EF+S AAAE  LQ +NG+ MP +E  FRLNWASF +G+K  V+ GP+ SIFVGDL+PDVT
Sbjct:   71 EFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQK--VDAGPDHSIFVGDLAPDVT 128

Query:  695 DTLLQELFVERYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQM 874
            D LLQE F   Y SV+ AKVV D +TGRSKGYGFV+F +E+ER+RA+ EMNG YCS R M
Sbjct:  129 DYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPM 188

Query:  875 RVGVATPKRAVANQQQQHHPSQALILAGGHGANGYMAHGSQSDG*SNNSTIFVGGIDPDV 1054
            R+  ATPK+ V  QQQ    +   +      A    A+ +  +     +TI V  +D +V
Sbjct:  189 RISAATPKKNVGVQQQYVTKAVYPVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNV 248

Query: 1055 TEEDLRQPFSQVGEVVSVKIPVGKGCGFVQLANRKSADDAIQSLNGTVIGKNTVRLSWGR 1234
            TEE+L++ FSQ+GEV+ VKIP  KG G+VQ   R SA++A+Q + G VIG+  VR+SW +
Sbjct:  249 TEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSK 308

Query: 1235 SPNKQ-WRGDSG-QQWNGAQ-RGQGCNNGGYANHHDSNTY 1345
            +P +  W   +   QWNG    GQG +   Y    D + Y
Sbjct:  309 NPGQDGWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVY 348

>TAIR9_protein||AT5G19350.2 | Symbols:  | RNA-binding protein 45 (RBP45),
        putative | chr5:6518978-6521295 FORWARD

          Length = 422

 Score =  328 bits (839), Expect = 9e-090
 Identities = 174/340 (51%), Positives = 226/340 (66%), Gaps = 9/340 (2%)
 Frame = +2

Query:  335 QHKTHERGSGDDVKTLWIGDLLYWMDETYLHNCFSHTGEVSSVKVIRNKLTCQSEGYGFV 514
            Q   H   + ++V+TLWIGDL YW+DE YL +CFS TGE+ SVKVIRNK+T Q EGYGF+
Sbjct:   11 QGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFI 70

Query:  515 EFLSRAAAEEVLQNFNGSVMPNSEQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVT 694
            EF+S AAAE  LQ +NG+ MP +E  FRLNWASF +G+K  V+ GP+ SIFVGDL+PDVT
Sbjct:   71 EFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQK--VDAGPDHSIFVGDLAPDVT 128

Query:  695 DTLLQELFVERYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQM 874
            D LLQE F   Y SV+ AKVV D +TGRSKGYGFV+F +E+ER+RA+ EMNG YCS R M
Sbjct:  129 DYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPM 188

Query:  875 RVGVATPKRAVANQQQQHHPSQALILAGGHGANGYMAHGSQSDG*SNNSTIFVGGIDPDV 1054
            R+  ATPK+ V  QQQ        +      A    A+ +  +     +TI V  +D +V
Sbjct:  189 RISAATPKKNVGVQQQY----VTKVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNV 244

Query: 1055 TEEDLRQPFSQVGEVVSVKIPVGKGCGFVQLANRKSADDAIQSLNGTVIGKNTVRLSWGR 1234
            TEE+L++ FSQ+GEV+ VKIP  KG G+VQ   R SA++A+Q + G VIG+  VR+SW +
Sbjct:  245 TEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSK 304

Query: 1235 SPNKQ-WRGDSG-QQWNGAQ-RGQGCNNGGYANHHDSNTY 1345
            +P +  W   +   QWNG    GQG +   Y    D + Y
Sbjct:  305 NPGQDGWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVY 344

>TAIR9_protein||AT1G47490.2 | Symbols: ATRBP47C | ATRBP47C (ARABIDOPSIS THALIANA
        RNA-BINDING PROTEIN 47C); RNA binding | chr1:17424801-17426114 FORWARD

          Length = 311

 Score =  279 bits (712), Expect = 5e-075
 Identities = 145/282 (51%), Positives = 187/282 (66%), Gaps = 5/282 (1%)
 Frame = +2

Query:  89 KMQTTNGSDSSLATPGATTPPPPQQWQQQQQQHWMAAMQYPGAAAMMMMQQQQMMMYPHQ 268
           K+Q+ + S  S        PPPP   QQ  ++        P       M+    ++ PHQ
Sbjct:   5 KIQSESESSDSHPVVDNQPPPPPPPPQQPAKEEENQPKTSP-TPPPHWMRYPPTVIIPHQ 63

Query: 269 --YVPYNYQQQQQHPHFQYASYQQQHKTHERGSGDDVKTLWIGDLLYWMDETYLHNCFS- 439
             Y P  +    Q+P+  +  +Q +   H+     + KT+W+GDL +WMDE YL++ F+ 
Sbjct:  64 MMYAPPPFPPYHQYPNHHHLHHQSRGNKHQNAFNGENKTIWVGDLHHWMDEAYLNSSFAS 123

Query: 440 -HTGEVSSVKVIRNKLTCQSEGYGFVEFLSRAAAEEVLQNFNGSVMPNSEQLFRLNWASF 616
               E+ SVKVIRNK    SEGYGFVEF S   A++VL+ FNG+ MPN++Q FRLNWASF
Sbjct: 124 GDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVLREFNGTTMPNTDQPFRLNWASF 183

Query: 617 STGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDSNTGRSKGYGF 796
           STGEKR   NGP+LSIFVGDLSPDV+D LL E F E+YPSVK+AKVV+D+NTGRSKGYGF
Sbjct: 184 STGEKRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGF 243

Query: 797 VRFGDENERSRALTEMNGAYCSNRQMRVGVATPKRAVANQQQ 922
           VRFGDENER++A+TEMNG  CS+R MR+G ATP++    QQQ
Sbjct: 244 VRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQQ 285

>TAIR9_protein||AT1G47490.1 | Symbols: ATRBP47C | ATRBP47C (ARABIDOPSIS THALIANA
        RNA-BINDING PROTEIN 47C); RNA binding | chr1:17424801-17427182 FORWARD

          Length = 433

 Score =  279 bits (712), Expect = 5e-075
 Identities = 145/282 (51%), Positives = 187/282 (66%), Gaps = 5/282 (1%)
 Frame = +2

Query:  89 KMQTTNGSDSSLATPGATTPPPPQQWQQQQQQHWMAAMQYPGAAAMMMMQQQQMMMYPHQ 268
           K+Q+ + S  S        PPPP   QQ  ++        P       M+    ++ PHQ
Sbjct:   5 KIQSESESSDSHPVVDNQPPPPPPPPQQPAKEEENQPKTSP-TPPPHWMRYPPTVIIPHQ 63

Query: 269 --YVPYNYQQQQQHPHFQYASYQQQHKTHERGSGDDVKTLWIGDLLYWMDETYLHNCFS- 439
             Y P  +    Q+P+  +  +Q +   H+     + KT+W+GDL +WMDE YL++ F+ 
Sbjct:  64 MMYAPPPFPPYHQYPNHHHLHHQSRGNKHQNAFNGENKTIWVGDLHHWMDEAYLNSSFAS 123

Query: 440 -HTGEVSSVKVIRNKLTCQSEGYGFVEFLSRAAAEEVLQNFNGSVMPNSEQLFRLNWASF 616
               E+ SVKVIRNK    SEGYGFVEF S   A++VL+ FNG+ MPN++Q FRLNWASF
Sbjct: 124 GDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVLREFNGTTMPNTDQPFRLNWASF 183

Query: 617 STGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAKVVIDSNTGRSKGYGF 796
           STGEKR   NGP+LSIFVGDLSPDV+D LL E F E+YPSVK+AKVV+D+NTGRSKGYGF
Sbjct: 184 STGEKRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGF 243

Query: 797 VRFGDENERSRALTEMNGAYCSNRQMRVGVATPKRAVANQQQ 922
           VRFGDENER++A+TEMNG  CS+R MR+G ATP++    QQQ
Sbjct: 244 VRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQQ 285


 Score =  139 bits (350), Expect = 4e-033
 Identities = 75/131 (57%), Positives = 93/131 (70%), Gaps = 5/131 (3%)
 Frame = +2

Query:  974 GYMAHG--SQSDG*SNNSTIFVGGIDPDVTEEDLRQPFSQVGEVVSVKIPVGKGCGFVQL 1147
            GYM +G  ++ +G   N+TIFVGG+D  VT+EDL+QPF++ GE+VSVKIPVGKGCGFVQ 
Sbjct:  287 GYMPNGTLTRPEGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKIPVGKGCGFVQF 346

Query: 1148 ANRKSADDAIQSLNGTVIGKNTVRLSWGRSP-NKQWRGDSGQQW-NGAQRGQGCNNGGY- 1318
             NR +A++A++ LNGTVIGK TVRLSWGR+P NKQ R   G QW +    GQ  N  GY 
Sbjct:  347 VNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQWVDPYYGGQFYNGYGYM 406

Query: 1319 ANHHDSNTYPA 1351
                D   YPA
Sbjct:  407 VPQPDPRMYPA 417

>TAIR9_protein||AT1G47500.1 | Symbols: ATRBP47C' | ATRBP47C' (RNA-binding
        protein 47C'); RNA binding | chr1:17432682-17434805 FORWARD

          Length = 435

 Score =  272 bits (693), Expect = 8e-073
 Identities = 146/280 (52%), Positives = 183/280 (65%), Gaps = 7/280 (2%)
 Frame = +2

Query: 146 PPPPQQWQQQQQQHWMAAMQYPGAAAMMMMQQQQMMMYPHQYVPYN-YQQQQQHPHFQYA 322
           PP P    ++ Q         P       +   QMM  P   +P++ Y Q   H HF + 
Sbjct:  29 PPHPPVEVEENQPKTSPTPPPPHWMRYPPVLMPQMMYAPPPPMPFSPYHQYPNHHHFHHQ 88

Query: 323 SYQQQHKTHERGSGDDVKTLWIGDLLYWMDETYLHNCF--SHTGEVSSVKVIRNKLTCQS 496
           S   +H+    G     KT+W+GDL  WMDE YL++ F  +   E+ S+KVIRNK    S
Sbjct:  89 SRGNKHQNAFNGEN---KTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSS 145

Query: 497 EGYGFVEFLSRAAAEEVLQNFNGSVMPNSEQLFRLNWASFSTGEKRAVENGPELSIFVGD 676
           EGYGFVEF S   A++VLQ FNG+ MPN++Q FRLNWASFSTGEKR   NGP+LSIFVGD
Sbjct: 146 EGYGFVEFESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGD 205

Query: 677 LSPDVTDTLLQELFVERYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAY 856
           L+PDV+D LL E F E+YPSVK+AKVV+D+NTGRSKGYGFVRFGDENER++A+TEMNG  
Sbjct: 206 LAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVK 265

Query: 857 CSNRQMRVGVATPKRAVANQQQ-QHHPSQALILAGGHGAN 973
           CS+R MR+G ATP++    QQQ  + PS A   + G   N
Sbjct: 266 CSSRAMRIGPATPRKTNGYQQQGGYMPSGAFTRSEGDTIN 305


 Score =  143 bits (358), Expect = 5e-034
 Identities = 77/131 (58%), Positives = 94/131 (71%), Gaps = 5/131 (3%)
 Frame = +2

Query:  974 GYMAHG--SQSDG*SNNSTIFVGGIDPDVTEEDLRQPFSQVGEVVSVKIPVGKGCGFVQL 1147
            GYM  G  ++S+G + N+TIFVGG+D  VT+EDL+QPFS+ GE+VSVKIPVGKGCGFVQ 
Sbjct:  289 GYMPSGAFTRSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPVGKGCGFVQF 348

Query: 1148 ANRKSADDAIQSLNGTVIGKNTVRLSWGRSP-NKQWRGDSGQQW-NGAQRGQGCNNGGY- 1318
             NR +A++A++ LNGTVIGK TVRLSWGR+P NKQ R   G QW +    GQ  N  GY 
Sbjct:  349 VNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQWVDPYYGGQFYNGYGYM 408

Query: 1319 ANHHDSNTYPA 1351
                D   YPA
Sbjct:  409 VPQPDPRMYPA 419

>TAIR9_protein||AT5G54900.1 | Symbols: ATRBP45A | ATRBP45A (RNA-binding protein
        45A); RNA binding | chr5:22295412-22298126 FORWARD

          Length = 388

 Score =  249 bits (634), Expect = 5e-066
 Identities = 129/243 (53%), Positives = 158/243 (65%), Gaps = 4/243 (1%)
 Frame = +2

Query: 212 GAAAMMMMQQQQMMMYPHQYVPYNYQQQQQHPHFQYASYQQQHKTHERGSGDDVKTLWIG 391
           GA  +   QQ   MM   Q      QQQ Q        +Q    +   GS  DVK+LWIG
Sbjct:  10 GAGQIPSGQQHLWMMMQQQ----QQQQQMQLSAAPLGQHQYGIGSQNPGSASDVKSLWIG 65

Query: 392 DLLYWMDETYLHNCFSHTGEVSSVKVIRNKLTCQSEGYGFVEFLSRAAAEEVLQNFNGSV 571
           DL  WMDE Y+ + F+ +GE +S KVIRNKLT QSEGYGF+EF+S + AE VLQ +NG+ 
Sbjct:  66 DLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQTYNGAP 125

Query: 572 MPNSEQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSVKSAK 751
           MP++EQ FRLNWA    GEKR    GP+ +IFVGDL+P+VTD +L + F   Y SVK AK
Sbjct: 126 MPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAK 185

Query: 752 VVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATPKRAVANQQQQHH 931
           VV+D  TGRSKGYGFVRF DENE+ RA+TEMNG YCS R MR+G A  K A+  Q   + 
Sbjct: 186 VVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQ 245

Query: 932 PSQ 940
            +Q
Sbjct: 246 NTQ 248


 Score =  112 bits (279), Expect = 8e-025
 Identities = 58/117 (49%), Positives = 74/117 (63%), Gaps = 10/117 (8%)
 Frame = +2

Query:  932 PSQALILAGGHGANGYMAHGSQSDG*SNNSTIFVGGIDPDVTEEDLRQPFSQVGEVVSVK 1111
            P Q  +     GAN         D   NN+TIFVGG+D +VT+++L+  F Q GE++ VK
Sbjct:  238 PMQPAMYQNTQGANA-------GDNDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVK 290

Query: 1112 IPVGKGCGFVQLANRKSADDAIQSLNGTVIGKNTVRLSWGRSPNKQWRGDSGQQWNG 1282
            IP GK CGFVQ AN+ SA+ A+  LNGT +G  ++RLSWGRSPNKQ       QWNG
Sbjct:  291 IPPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSPNKQ---SDQAQWNG 344

>TAIR9_protein||AT1G11650.2 | Symbols: ATRBP45B, RBP45B | RNA-binding protein 45
        (RBP45), putative | chr1:3914895-3917941 FORWARD

          Length = 406

 Score =  240 bits (610), Expect = 3e-063
 Identities = 118/196 (60%), Positives = 147/196 (75%), Gaps = 3/196 (1%)
 Frame = +2

Query: 359 SGDDVKTLWIGDLLYWMDETYLHNCFSHTGEVSSVKVIRNKLTCQSEGYGFVEFLSRAAA 538
           + D+++TLWIGDL YWMDE +L+ CF+HTGE+ S KVIRNK T Q EGYGF+EF S AAA
Sbjct:  57 TADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAA 116

Query: 539 EEVLQNFNGSVMPN-SEQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQEL 715
           E VLQ FN + +P+  +QLFRLNWAS S+G+KR  ++ P+ +IFVGDL+ DVTD +L E 
Sbjct: 117 ERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR--DDSPDYTIFVGDLAADVTDYILLET 174

Query: 716 FVERYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATP 895
           F   YPSVK AKVVID  TGR+KGYGFVRF DE+E+ RA+TEMNG  CS R MR+G A  
Sbjct: 175 FRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAAS 234

Query: 896 KRAVANQQQQHHPSQA 943
           K+ V  Q+  +  S A
Sbjct: 235 KKGVTGQRDSYQSSAA 250


 Score =  119 bits (297), Expect = 6e-027
 Identities = 59/121 (48%), Positives = 77/121 (63%), Gaps = 1/121 (0%)
 Frame = +2

Query:  983 AHGSQSDG*SNNSTIFVGGIDPDVTEEDLRQPFSQVGEVVSVKIPVGKGCGFVQLANRKS 1162
            A G  +D   NN+T+FVGG+D  VT++ L+  FSQ GE+V VKIP GK CGFVQ + +  
Sbjct:  249 AAGVTTDNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSC 308

Query: 1163 ADDAIQSLNGTVIGKNTVRLSWGRSPNKQWRGDSGQQWNGAQRGQGCNNGGYANHHDSNT 1342
            A++A++ LNG  +G  TVRLSWGRSP+ +  GD  Q + G   GQG    GY    D N 
Sbjct:  309 AEEALRMLNGVQLGGTTVRLSWGRSPSNKQSGDPSQFYYGGY-GQGQEQYGYTMPQDPNA 367

Query: 1343 Y 1345
            Y
Sbjct:  368 Y 368

>TAIR9_protein||AT1G11650.1 | Symbols: ATRBP45B, RBP45B | RNA-binding protein 45
        (RBP45), putative | chr1:3914895-3917301 FORWARD

          Length = 307

 Score =  240 bits (610), Expect = 3e-063
 Identities = 118/196 (60%), Positives = 147/196 (75%), Gaps = 3/196 (1%)
 Frame = +2

Query: 359 SGDDVKTLWIGDLLYWMDETYLHNCFSHTGEVSSVKVIRNKLTCQSEGYGFVEFLSRAAA 538
           + D+++TLWIGDL YWMDE +L+ CF+HTGE+ S KVIRNK T Q EGYGF+EF S AAA
Sbjct:  57 TADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAA 116

Query: 539 EEVLQNFNGSVMPN-SEQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQEL 715
           E VLQ FN + +P+  +QLFRLNWAS S+G+KR  ++ P+ +IFVGDL+ DVTD +L E 
Sbjct: 117 ERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR--DDSPDYTIFVGDLAADVTDYILLET 174

Query: 716 FVERYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATP 895
           F   YPSVK AKVVID  TGR+KGYGFVRF DE+E+ RA+TEMNG  CS R MR+G A  
Sbjct: 175 FRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAAS 234

Query: 896 KRAVANQQQQHHPSQA 943
           K+ V  Q+  +  S A
Sbjct: 235 KKGVTGQRDSYQSSAA 250

>TAIR9_protein||AT4G27000.1 | Symbols: ATRBP45C | ATRBP45C; RNA binding |
        chr4:13554983-13557763 REVERSE

          Length = 416

 Score =  234 bits (595), Expect = 2e-061
 Identities = 127/244 (52%), Positives = 156/244 (63%), Gaps = 11/244 (4%)
 Frame = +2

Query: 233 MQQQQMMMYPHQ-----YVPYNYQQQQQHPHFQYASYQQQH---KTHERGSGDDVKTLWI 388
           +QQQQ  M  HQ       P  + QQ      Q    QQQ+    +   GS  ++++LWI
Sbjct:  27 LQQQQSWMMQHQQQQQGQPPAGWNQQSAPSSGQ--PQQQQYGGGGSQNPGSAGEIRSLWI 84

Query: 389 GDLLYWMDETYLHNCFSHTGEVSSVKVIRNKLTCQSEGYGFVEFLSRAAAEEVLQNFNGS 568
           GDL  WMDE YL N F  TGE ++ KVIRNK    SEGYGF+EF++ A AE  LQ +NG+
Sbjct:  85 GDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAERNLQTYNGA 144

Query: 569 VMPNSEQLFRLNWASFSTGEKRAVENGPELSIFVGDLSPDVTDTLLQELFVERYPSVKSA 748
            MP+SEQ FRLNWA    GE+R  E GPE ++FVGDL+PDVTD +L E F   Y SVK A
Sbjct: 145 PMPSSEQAFRLNWAQLGAGERRQAE-GPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGA 203

Query: 749 KVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATPKRAVANQQQQH 928
           KVV D  TGRSKGYGFVRF DE+E+ RA+TEMNG YCS+R MR G A  K+ +  Q   +
Sbjct: 204 KVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLTMQPASY 263

Query: 929 HPSQ 940
             +Q
Sbjct: 264 QNTQ 267


 Score =  108 bits (269), Expect = 1e-023
 Identities = 61/125 (48%), Positives = 74/125 (59%), Gaps = 6/125 (4%)
 Frame = +2

Query:  989 GSQSDG*SNNSTIFVGGIDPDVTEEDLRQPFSQVGEVVSVKIPVGKGCGFVQLANRKSAD 1168
            G+  +    N+TIFVG +D  VTE+DL+  F Q GE+V VKIP GK CGFVQ ANR  A+
Sbjct:  268 GNSGESDPTNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRACAE 327

Query: 1169 DAIQSLNGTVIGKNTVRLSWGRSP-NKQWRGDSGQQWNG----AQRGQGCNNGGYA-NHH 1330
             A+  LNGT +G  ++RLSWGRSP NKQ + D  Q   G        QG    GYA    
Sbjct:  328 QALSVLNGTQLGGQSIRLSWGRSPSNKQTQPDQAQYGGGGGYYGYPPQGYEAYGYAPPPQ 387

Query: 1331 DSNTY 1345
            D N Y
Sbjct:  388 DPNAY 392

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,865,654,250
Number of Sequences: 33410
Number of Extensions: 3865654250
Number of Successful Extensions: 147658413
Number of sequences better than 0.0: 0