BLASTX 7.6.2
Query= UN06484 /QuerySize=979
(978 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297806867|ref|XP_002871317.1| predicted protein [Arabidopsis ... 117 2e-024
gi|297810599|ref|XP_002873183.1| predicted protein [Arabidopsis ... 112 8e-023
gi|15242768|ref|NP_195968.1| RNA-binding (RRM/RBD/RNP motifs) fa... 105 1e-020
gi|334185184|ref|NP_187528.2| RNA recognition motif-containing p... 101 2e-019
gi|5923685|gb|AAD56336.1|AC009326_23 hypothetical protein [Arabi... 94 2e-017
gi|297810651|ref|XP_002873209.1| predicted protein [Arabidopsis ... 93 7e-017
gi|297851804|ref|XP_002893783.1| predicted protein [Arabidopsis ... 80 4e-013
gi|297810617|ref|XP_002873192.1| predicted protein [Arabidopsis ... 76 6e-012
gi|297788311|ref|XP_002862284.1| predicted protein [Arabidopsis ... 74 4e-011
gi|297831128|ref|XP_002883446.1| predicted protein [Arabidopsis ... 72 9e-011
gi|297806309|ref|XP_002871038.1| predicted protein [Arabidopsis ... 72 2e-010
gi|297810421|ref|XP_002873094.1| predicted protein [Arabidopsis ... 71 2e-010
gi|297810605|ref|XP_002873186.1| hypothetical protein ARALYDRAFT... 69 8e-010
gi|297810423|ref|XP_002873095.1| predicted protein [Arabidopsis ... 65 2e-008
gi|145334285|ref|NP_001078524.1| RNA-binding (RRM/RBD/RNP motifs... 62 1e-007
gi|15239112|ref|NP_196162.1| RNA-binding protein [Arabidopsis th... 62 1e-007
gi|7378635|emb|CAB83311.1| putative protein [Arabidopsis thaliana] 59 1e-006
gi|9294322|dbj|BAB02219.1| unnamed protein product [Arabidopsis ... 57 3e-006
gi|15229678|ref|NP_188491.1| nucleolin [Arabidopsis thaliana] 57 3e-006
>gi|297806867|ref|XP_002871317.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 313
Score = 117 bits (293), Expect = 2e-024
Identities = 68/158 (43%), Positives = 93/158 (58%), Gaps = 9/158 (5%)
Frame = +1
Query: 205 VFVTGYDTKLPHDDVDGALRNHFSSCGRITDILIRQTDEGLV-SRAIIFFLAEGAVDKAL 381
V V+G+D LP D++ +LR HFSSCG +T+I I + G++ S A IF L E A ++AL
Sbjct: 133 VSVSGFDPWLPEHDLESSLRRHFSSCGEVTNISIHRGPGGIIKSPAFIFLLGEDAAEQAL 192
Query: 382 QLSGSDVGGWTAIVEPFPFLKYEGRSIT------VNVTGYDISRSEIDFKSAIRQHFSSC 543
+LSGSDVGGW V+ P S+ ++VTGYD E D K+A+ +HF SC
Sbjct: 193 ELSGSDVGGWKVAVKVLPLPPTINESLNQTSCFGISVTGYDTLLPEDDLKTALSKHFRSC 252
Query: 544 GEISHFKISKKVASAKFDVDGEDAQDKVMELDESIMCG 657
GE++ I + +SA + GE A DK EL S M G
Sbjct: 253 GEVTDISIRR--SSAFIYIMGEGAGDKATELSGSDMGG 288
Score = 75 bits (184), Expect = 1e-011
Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 6/73 (8%)
Frame = +1
Query: 205 VFVTGYDTKLPHDDVDGALRNHFSSCGRITDILIRQTDEGLVSRAIIFFLAEGAVDKALQ 384
+ VTGYDT LP DD+ AL HF SCG +TDI IR+ S A I+ + EGA DKA +
Sbjct: 227 ISVTGYDTLLPEDDLKTALSKHFRSCGEVTDISIRR------SSAFIYIMGEGAGDKATE 280
Query: 385 LSGSDVGGWTAIV 423
LSGSD+GG +V
Sbjct: 281 LSGSDMGGGWKVV 293
>gi|297810599|ref|XP_002873183.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 338
Score = 112 bits (280), Expect = 8e-023
Identities = 72/168 (42%), Positives = 93/168 (55%), Gaps = 6/168 (3%)
Frame = +1
Query: 184 KTRDVGRVFVTGYDTKLPHDDVDGALRNHFSSCGRITDILI----RQTDEGLVSRAIIFF 351
K DVGR+ VTGYDT LP DDV AL HFSSCG I +I I +T L S ++
Sbjct: 10 KLSDVGRIKVTGYDTGLPLDDVYTALAEHFSSCGEIWEIYIPLKFDETKTSLNSHGVMCL 69
Query: 352 L-AEGAVDKALQLSGSDVGGWTAIVEPFPFLKYEGRSITVNVTGYDISRSEIDFKSAIRQ 528
L + AV+KALQL+GS+VGGW VE +P+ + V V GYD S + A+ +
Sbjct: 70 LGGQDAVEKALQLTGSNVGGWNVSVEAYPYPANANDRVIVIVEGYDTSLRKSQISRALVK 129
Query: 529 HFSSCGEISHFKISKKVASAKFDVDGEDAQDKVMELDESIMCGSKIHV 672
FS G I+ KK +S V G+D D V +L+ S M G K+ V
Sbjct: 130 LFSPYGTITRLSFFKK-SSVTAIVHGKDVADTVTQLNGSYMRGRKLAV 176
>gi|15242768|ref|NP_195968.1| RNA-binding (RRM/RBD/RNP motifs) family protein
[Arabidopsis thaliana]
Length = 321
Score = 105 bits (261), Expect = 1e-020
Identities = 62/161 (38%), Positives = 90/161 (55%), Gaps = 12/161 (7%)
Frame = +1
Query: 205 VFVTGYDTKLPHDDVDGALRNHFSSCGRITDILIRQTDEGLVSRAIIF--FLAEGAVDKA 378
+ V GYDT L + AL HF+SCG IT I + + + + +++ F EGA DKA
Sbjct: 26 ICVEGYDTSLKEYPLRLALTKHFASCGEITQIYVPRDFKKKILKSVSFMWIKGEGAEDKA 85
Query: 379 LQLSGSDVGGWTAIVEPFPFLKYEGRSITVNVTGYDISRSEIDFKSAIRQHFSSCGEISH 558
LQLSG+DVGGWT IV+P P + T++V GYD S + + + +HF SCGEI H
Sbjct: 86 LQLSGTDVGGWTVIVKPKPKHEPPSPITTISVEGYDTSLQKYLLELILEKHFDSCGEIRH 145
Query: 559 FKIS--------KKVASAKFDVDGEDAQDKVMELDESIMCG 657
+ K VA + ++GE A+DK ++L + + G
Sbjct: 146 VYVPTDYERGVLKSVAFLR--IEGEGAEDKALQLSGTDVVG 184
>gi|334185184|ref|NP_187528.2| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 132
Score = 101 bits (250), Expect = 2e-019
Identities = 50/104 (48%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
Frame = +1
Query: 178 KFKTRDVGRVFVTGYDTKLPHDDVDGALRNHFSSCGRITDILIRQT-DEGLVSRAIIFFL 354
K + D+ R+ VTGYD +LP + V+ L+ FS CG ITD+ I +T + L S A I+F+
Sbjct: 16 KIRDSDIERISVTGYDIELPREHVESELKKLFSPCGEITDVHIPETRNSSLWSHAFIYFV 75
Query: 355 AEGAVDKALQLSGSDVGGWTAIVEPFPFLKYEGRSITVNVTGYD 486
EG DKALQL+GSD+GGWT E PF K E + + V GYD
Sbjct: 76 GEGTADKALQLNGSDMGGWTVDAEADPFPKEEDNCVELEVEGYD 119
>gi|5923685|gb|AAD56336.1|AC009326_23 hypothetical protein [Arabidopsis
thaliana]
Length = 198
Score = 94 bits (233), Expect = 2e-017
Identities = 49/104 (47%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
Frame = +1
Query: 178 KFKTRDVGRVFVTGYDTKLPHDDVDGALRNHFSSCGRITDILIRQT-DEGLVSRAIIFFL 354
K + D+ R+ VTGYD +LP + V+ L+ FS CG ITD+ I +T + L S A I+F+
Sbjct: 16 KIRDSDIERISVTGYDIELPREHVESELKKLFSPCGEITDVHIPETRNSSLWSHAFIYFV 75
Query: 355 AEGAVDKALQLSGSDVGGWTAIVEPFPFLKYEGRSITVNVTGYD 486
EG DKALQL+GSD+GGWT E PF K E V + G D
Sbjct: 76 GEGTADKALQLNGSDMGGWTVDAEADPFPKEEDNFSIVYLLGED 119
>gi|297810651|ref|XP_002873209.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 170
Score = 93 bits (229), Expect = 7e-017
Identities = 54/121 (44%), Positives = 72/121 (59%), Gaps = 6/121 (4%)
Frame = +1
Query: 142 GLEWDDPRTLVYKFKTRDVGRVFVTGYDTKLPHDDVDGALRNHFSSCGRITDILI----R 309
GL+ ++ KF D GR+ VTGYDT LP DDV AL+NHFS CG ITD+ I
Sbjct: 9 GLKRKGRERIIPKFS--DAGRIIVTGYDTGLPLDDVATALKNHFSRCGMITDVSIPLDSA 66
Query: 310 QTDEGLVSRAIIFFLAEGAVDKALQLSGSDVGGWTAIVEPFPFLKYEGRSITVNVTGYDI 489
+ + L I+F+ EGAVDKALQL+GSD+GG VE +P+ + S + G D+
Sbjct: 67 KNYKILQRCGYIYFVGEGAVDKALQLNGSDMGGRNVSVEAYPYDEDANDSAGAMIYGKDV 126
Query: 490 S 492
+
Sbjct: 127 A 127
>gi|297851804|ref|XP_002893783.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 276
Score = 80 bits (196), Expect = 4e-013
Identities = 41/80 (51%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Frame = +1
Query: 202 RVFVTGYDTKLPHDDVDGALRNHFSSCGRITDILI-RQTDEGLVSRAIIFFLAEGAVDKA 378
++ VTGYDT LP D+ L NHFSSCG IT+++I + + GL S A+I L G+V+KA
Sbjct: 163 KMIVTGYDTSLPEIDIQIRLSNHFSSCGEITNVMIPKDANGGLDSTALISILGAGSVEKA 222
Query: 379 LQLSGSDVGGWT-AIVEPFP 435
L+L G DVGGW A+V P
Sbjct: 223 LELGGCDVGGWNIAVVTVLP 242
>gi|297810617|ref|XP_002873192.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 76 bits (186), Expect = 6e-012
Identities = 37/73 (50%), Positives = 48/73 (65%)
Frame = +1
Query: 334 RAIIFFLAEGAVDKALQLSGSDVGGWTAIVEPFPFLKYEGRSITVNVTGYDISRSEIDFK 513
R I+FL EGAVDKALQL+G DVGGW V+ +PF K + + V G+D S EI +
Sbjct: 23 RGYIYFLGEGAVDKALQLNGVDVGGWNVSVKAYPFPKDANNEVFIEVEGFDTSLHEILIE 82
Query: 514 SAIRQHFSSCGEI 552
SA+ HFSS G++
Sbjct: 83 SALISHFSSYGKL 95
>gi|297788311|ref|XP_002862284.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 74 bits (179), Expect = 4e-011
Identities = 39/77 (50%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Frame = +1
Query: 202 RVFVTGYDTKLPHDDVDGALRNHFSSCGRITDILIRQTDEGLVSR--AIIFFLAEGAVDK 375
R+ VTGYDT LP DV L HFSSCG +T++ I D G + R +I +GAVDK
Sbjct: 146 RIGVTGYDTSLPKIDVQIGLSKHFSSCGEVTNVSIPTDDSGGLYRFASITILGGKGAVDK 205
Query: 376 ALQLSGSDVGGWTAIVE 426
AL+LSG +VGGW V+
Sbjct: 206 ALKLSGRNVGGWKITVD 222
>gi|297831128|ref|XP_002883446.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 319
Score = 72 bits (176), Expect = 9e-011
Identities = 39/82 (47%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Frame = +1
Query: 205 VFVTGYDTKLPHDDVDGALRNHFSSCGRITDILIRQTDEGLVSRAIIFFL--AEGAVDKA 378
V V GYDT L + L HF+SCG IT+I + E + +++ F EGA +KA
Sbjct: 47 VSVEGYDTWLRKYPLKLVLEKHFASCGEITNIYVPTDFERGILKSVAFMRIEGEGAEEKA 106
Query: 379 LQLSGSDVGGWTAIVEPFPFLK 444
LQLSG+D+GGWTAIV+P P+ K
Sbjct: 107 LQLSGTDIGGWTAIVKPAPWQK 128
>gi|297806309|ref|XP_002871038.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 248
Score = 72 bits (174), Expect = 2e-010
Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Frame = +1
Query: 205 VFVTGYDTKLPHDDVDGALRNHFSSCGRITDILIRQTDEGLVSRAIIFFL--AEGAVDKA 378
V V GYDT L + L HF+SCG IT+I + E + +++ F EGA +KA
Sbjct: 47 VSVEGYDTWLRKYPLKLVLEKHFASCGEITNIYVPTDFERGILKSVAFMRIEGEGAEEKA 106
Query: 379 LQLSGSDVGGWTAIVEPFPFLK 444
LQLSG+DVGGWTAIV+P P K
Sbjct: 107 LQLSGTDVGGWTAIVKPAPSQK 128
>gi|297810421|ref|XP_002873094.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 262
Score = 71 bits (173), Expect = 2e-010
Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Frame = +1
Query: 205 VFVTGYDTKLPHDDVDGALRNHFSSCGRITDILIRQTDEGLVSRAIIFFL--AEGAVDKA 378
+ V GYDT L + L HF+SCG IT+I + E + +++ F EGA +KA
Sbjct: 34 ISVEGYDTWLRKYPLKLVLEKHFASCGEITNIYVPTDFERGILKSVAFMRIEGEGAEEKA 93
Query: 379 LQLSGSDVGGWTAIVEPFPFLK 444
LQLSG+DVGGWTAIV+P P K
Sbjct: 94 LQLSGTDVGGWTAIVKPAPSQK 115
>gi|297810605|ref|XP_002873186.1| hypothetical protein ARALYDRAFT_487293
[Arabidopsis lyrata subsp. lyrata]
Length = 138
Score = 69 bits (168), Expect = 8e-010
Identities = 42/101 (41%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Frame = +1
Query: 193 DVGRVFVTGYDTKLPHDDVDGALRNHFSSCGRITDILI-RQTDEGLVSRAIIFFLAEGAV 369
DVGR+ VTGYDT LP DDV AL HFSSCG I +I I + DE S ++L
Sbjct: 1 DVGRIKVTGYDTGLPLDDVYTALAEHFSSCGEIWEIYIPLKFDETKTSLNRFWWLLPPPF 60
Query: 370 DKALQLSGSDVGGWTAIVEPFPFLKYEGRSITVNVTGYDIS 492
+VGGW VE +P+ S+T V G D++
Sbjct: 61 LSNSSAQSCNVGGWNVSVEAYPYPANANDSVTAIVHGKDVA 101
>gi|297810423|ref|XP_002873095.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 227
Score = 65 bits (156), Expect = 2e-008
Identities = 41/99 (41%), Positives = 52/99 (52%), Gaps = 12/99 (12%)
Frame = +1
Query: 202 RVFVTGYDTKLPHDDVDGALRNHFSSCGRITDILIRQTDEGLVSRAIIFFLAEGAVDKAL 381
RV VTGYDT LP D+ AL HFSSCG +T +++ G I+ E DKAL
Sbjct: 128 RVRVTGYDTWLPEIDIQIALCEHFSSCGEVTQVMVLPCGSG-----SIYLEEERCEDKAL 182
Query: 382 QLSGSDVGGWTAIVEPF-----PFLKYEGRSITVNVTGY 483
+L+G +GG +VEP K +GR T TGY
Sbjct: 183 KLNGCKMGGMNLVVEPVKARPEDLKKRKGRPCT--TTGY 219
>gi|145334285|ref|NP_001078524.1| RNA-binding (RRM/RBD/RNP motifs) family
protein [Arabidopsis thaliana]
Length = 226
Score = 62 bits (150), Expect = 1e-007
Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Frame = +1
Query: 202 RVFVTGYDTKLPHDDVDGALRNHFSSCGRITDILIRQTDEGLVSRAIIFFLAEGAVDKAL 381
RV VTGYDT +P D+ AL HFSSCG +T +++ + G I+ E DKAL
Sbjct: 129 RVRVTGYDTCVPKIDIQMALCEHFSSCGEVTQVVVLPSGSG-----SIYLQGERCEDKAL 183
Query: 382 QLSGSDVGGWTAIVE 426
QL+G +GG +VE
Sbjct: 184 QLNGCKMGGMNLVVE 198
>gi|15239112|ref|NP_196162.1| RNA-binding protein [Arabidopsis thaliana]
Length = 158
Score = 62 bits (149), Expect = 1e-007
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Frame = +1
Query: 193 DVGRVFVTGYDTKLPHDDVDGALRNHFSSCGRITDILI--RQTDEGLVSRAIIFFLAEGA 366
DVGR+ VTGYDT LP DD+ AL HFSSCG I +I I + + + + L
Sbjct: 21 DVGRIKVTGYDTGLPLDDLYTALAEHFSSCGEIWEIYIPLKFDETNTILNRFWWLLPPPF 80
Query: 367 VDKALQLSGSDVGGWTAIVEPFPFLKYEGRSITVNVTGYDIS 492
+ + + +VGGW VE +P+ + S+ V G D++
Sbjct: 81 LSNS--SAQVNVGGWNVSVEAYPYPAHANDSVRAVVHGKDVA 120
>gi|7378635|emb|CAB83311.1| putative protein [Arabidopsis thaliana]
Length = 248
Score = 59 bits (141), Expect = 1e-006
Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Frame = +1
Query: 202 RVFVTGYDTKLPHDDVDGALRNHFSSCGRITDILIRQTDEGLVSRAIIFFLAEGAVDKAL 381
RV VTGYDT +P D+ AL HFSSCG +T +++ + G I+ E DKAL
Sbjct: 112 RVRVTGYDTCVPKIDIQMALCEHFSSCGEVTQVVVLPSGSG-----SIYLQGERCEDKAL 166
Query: 382 QLSGSDVGGWTAIVE 426
QL+G +GG E
Sbjct: 167 QLNGCKMGGMNLAYE 181
>gi|9294322|dbj|BAB02219.1| unnamed protein product [Arabidopsis thaliana]
Length = 610
Score = 57 bits (137), Expect = 3e-006
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +1
Query: 205 VFVTGYDTKLPHDDVDGALRNHFSSCGRITDILIRQTDEGLVSRAIIFFLAEGAVDKALQ 384
++V G+ + L D++ LR+HFS CG +T + + E SR + D+ALQ
Sbjct: 455 IYVRGFSSSLGEDEIKKELRSHFSKCGEVTRVHVPTDRETGASRGFAYIDLTSGFDEALQ 514
Query: 385 LSGSDVGGWTAIVEPF-PFLKYEGRS 459
LSGS++GG VE P EGRS
Sbjct: 515 LSGSEIGGGNIHVEESRPRDSDEGRS 540
>gi|15229678|ref|NP_188491.1| nucleolin [Arabidopsis thaliana]
Length = 636
Score = 57 bits (137), Expect = 3e-006
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +1
Query: 205 VFVTGYDTKLPHDDVDGALRNHFSSCGRITDILIRQTDEGLVSRAIIFFLAEGAVDKALQ 384
++V G+ + L D++ LR+HFS CG +T + + E SR + D+ALQ
Sbjct: 481 IYVRGFSSSLGEDEIKKELRSHFSKCGEVTRVHVPTDRETGASRGFAYIDLTSGFDEALQ 540
Query: 385 LSGSDVGGWTAIVEPF-PFLKYEGRS 459
LSGS++GG VE P EGRS
Sbjct: 541 LSGSEIGGGNIHVEESRPRDSDEGRS 566
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 748,178,612,197
Number of Sequences: 15229318
Number of Extensions: 748178612197
Number of Successful Extensions: 201585142
Number of sequences better than 0.0: 0
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