BLASTX 7.6.2
Query= UN06533 /QuerySize=1045
(1044 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O26779|ECX1_METTH Probable exosome complex exonuclease 1 OS=M... 128 7e-029
sp|Q97BZ5|ECX1_THEVO Probable exosome complex exonuclease 1 OS=T... 123 3e-027
sp|A9A5C9|ECX1_NITMS Probable exosome complex exonuclease 1 OS=N... 121 1e-026
sp|A3MUP1|ECX1_PYRCJ Probable exosome complex exonuclease 1 OS=P... 121 1e-026
sp|A0RXU1|ECX1_CENSY Probable exosome complex exonuclease 1 OS=C... 119 4e-026
sp|Q8U0L9|ECX1_PYRFU Probable exosome complex exonuclease 1 OS=P... 119 5e-026
sp|O59223|ECX1_PYRHO Probable exosome complex exonuclease 1 OS=P... 118 7e-026
sp|Q9V119|ECX1_PYRAB Probable exosome complex exonuclease 1 OS=P... 118 9e-026
sp|Q5JIR6|ECX1_PYRKO Probable exosome complex exonuclease 1 OS=P... 117 2e-025
sp|B6YSI2|ECX1_THEON Probable exosome complex exonuclease 1 OS=T... 117 2e-025
sp|Q8ZVM9|ECX1_PYRAE Probable exosome complex exonuclease 1 OS=P... 116 4e-025
sp|Q8TYC1|ECX1_METKA Probable exosome complex exonuclease 1 OS=M... 115 6e-025
sp|C5A2B9|ECX1_THEGJ Probable exosome complex exonuclease 1 OS=T... 115 6e-025
sp|B1Y978|ECX1_THENV Probable exosome complex exonuclease 1 OS=T... 115 6e-025
sp|Q4JB27|ECX1_SULAC Probable exosome complex exonuclease 1 OS=S... 114 1e-024
sp|Q9HIP2|ECX1_THEAC Probable exosome complex exonuclease 1 OS=T... 114 2e-024
sp|A1RST0|ECX1_PYRIL Probable exosome complex exonuclease 1 OS=P... 113 2e-024
sp|A2BKC0|ECX1_HYPBU Probable exosome complex exonuclease 1 OS=H... 113 3e-024
sp|Q6P0I8|EXOS6_DANRE Exosome complex exonuclease MTR3 OS=Danio ... 113 3e-024
sp|Q9UXC2|ECX1_SULSO Probable exosome complex exonuclease 1 OS=S... 110 2e-023
>sp|O26779|ECX1_METTH Probable exosome complex exonuclease 1 OS=Methanobacterium
thermoautotrophicum GN=MTH_683 PE=1 SV=1
Length = 240
Score = 128 bits (321), Expect = 7e-029
Identities = 71/220 (32%), Positives = 115/220 (52%), Gaps = 3/220 (1%)
Frame = +1
Query: 199 RPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRESK-KATSYSDVGGLN 375
R DGR F + RP ++ G + A GS+Y EFG K++V+V+GPRE++ + D +
Sbjct: 17 REDGRAFDELRPLKIEAGILERADGSSYLEFGGNKILVAVYGPREAQIRKLQRPDRAVIR 76
Query: 376 CNVSYTTFSSPALGSQGTDHK--EYSSMLLKALEGVIMMETFPKTTVDVFALVLESGGSD 549
C + FS G D + E S + +AL +++E FP++ +DVF VLE+ G
Sbjct: 77 CRYNMAPFSVEERKRPGPDRRSVEISKITAEALRPALILEKFPRSVIDVFIEVLEAEGGT 136
Query: 550 LPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRS 729
I+ A +ALADAGI M D++ A + +G +++D EE+ + +P
Sbjct: 137 RCAGITAASVALADAGIPMRDMVVACAAGKVGDQVVLDLSEEEDKEGQADVPVAILPRTR 196
Query: 730 EITQLTITGEWTTPNINEATQLCVDACSKLGEIMRDCLKQ 849
EIT L G T A L V+ C ++ E+ ++ L++
Sbjct: 197 EITLLQSDGNLTPEEFERALDLAVEGCLRIHEVQKEALRK 236
>sp|Q97BZ5|ECX1_THEVO Probable exosome complex exonuclease 1 OS=Thermoplasma
volcanium (strain ATCC 51530 / DSM 4299 / IFO 15438 / JCM 9571 / GSS1)
GN=TV0310 PE=3 SV=1
Length = 248
Score = 123 bits (307), Expect = 3e-027
Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 3/221 (1%)
Frame = +1
Query: 190 DWTRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRES-KKATSYSDVG 366
D R DGR F++ RP ++ G ++ A GSAY E+G K+IV V+GP+E+ K + D
Sbjct: 15 DNLRLDGRSFNELRPIKIEAGVLNRADGSAYIEWGGNKIIVGVYGPKEAYPKHSQDIDHA 74
Query: 367 GLNCNVSYTTFSSPALGSQGTDHK--EYSSMLLKALEGVIMMETFPKTTVDVFALVLESG 540
+ + FS G D + E S ++ +AL IM+E FP+ +DV+ VL++
Sbjct: 75 VVKARYNMAAFSVDERKRPGPDRRTMEISKVISEALSSSIMIEQFPRAEIDVYIEVLQAD 134
Query: 541 GSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMP 720
++ A +ALADAGI M D++ + + +++D EE+ + M MP
Sbjct: 135 AGTRIAGLTAATVALADAGIPMRDMVVGCTAGKVDGHIVLDLSKEEDNFGEADIPMAIMP 194
Query: 721 SRSEITQLTITGEWTTPNINEATQLCVDACSKLGEIMRDCL 843
EI L + G+ T EAT + ++A K+ +I R+ L
Sbjct: 195 KTGEIVLLQMDGDVTEDEFYEATSMIIEATKKISQIQRNAL 235
>sp|A9A5C9|ECX1_NITMS Probable exosome complex exonuclease 1 OS=Nitrosopumilus
maritimus (strain SCM1) GN=Nmar_0432 PE=3 SV=1
Length = 244
Score = 121 bits (301), Expect = 1e-026
Identities = 72/223 (32%), Positives = 116/223 (52%), Gaps = 3/223 (1%)
Frame = +1
Query: 184 DLDWTRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRE-SKKATSYSD 360
D + R DGR + R +++ G + A GS+Y EFG+ K++V VFGPR+ K S +D
Sbjct: 12 DENGKRCDGRTVDEPRRIMIKAGGLKNADGSSYIEFGDNKILVGVFGPRDVHPKHMSDTD 71
Query: 361 VGGLNCNVSYTTFSSPALGSQGTDHK--EYSSMLLKALEGVIMMETFPKTTVDVFALVLE 534
G L FS + + E S ++ +ALE +M+E FP+T VDVF VL+
Sbjct: 72 TGILRVRYHMEPFSVGERKNPAPSRREIEISKVIKEALEPAVMLEKFPRTAVDVFIEVLQ 131
Query: 535 SGGSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTC 714
+ G ++ A +ALADAGI M D++ A++ + ++++D EE+ +
Sbjct: 132 ADGGTRCAALTAASVALADAGIPMRDMVAAIAAGKVADTVILDVNNEEDQAGQADMPIGY 191
Query: 715 MPSRSEITQLTITGEWTTPNINEATQLCVDACSKLGEIMRDCL 843
MP+ +IT L + G T + Q+ VD C + E+ + L
Sbjct: 192 MPNLEKITLLQLDGVLTPEEYKKCIQVGVDGCKLVYELQKKAL 234
>sp|A3MUP1|ECX1_PYRCJ Probable exosome complex exonuclease 1 OS=Pyrobaculum
calidifontis (strain JCM 11548 / VA1) GN=Pcal_0933 PE=3 SV=1
Length = 246
Score = 121 bits (301), Expect = 1e-026
Identities = 77/231 (33%), Positives = 114/231 (49%), Gaps = 4/231 (1%)
Frame = +1
Query: 199 RPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRE-SKKATSYSDVGGLN 375
R DGR Q R +Q G VS A GSA +G T + +V+GPRE + S D G +
Sbjct: 14 RADGRAPDQMREVQIQVGTVSNADGSAVVSYGATTAVAAVYGPREMHPRHLSLPDRGVMR 73
Query: 376 CNVSYTTFSSPALGSQGTDHK---EYSSMLLKALEGVIMMETFPKTTVDVFALVLESGGS 546
FS+ T + E S +L +ALE +M+E +P++ +DVF +L++ GS
Sbjct: 74 VRYHMAPFSTKDERKSPTPSRREIEISKVLREALEPAVMLEQYPRSRIDVFIEILQADGS 133
Query: 547 DLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSR 726
++ A LALADAGI M DL+ VSV + ++++D E+ +G + MP+
Sbjct: 134 TRVASLTAASLALADAGIYMRDLVVGVSVGLVDGTVVLDLNGLEDNYGEGDMPVGYMPNL 193
Query: 727 SEITQLTITGEWTTPNINEATQLCVDACSKLGEIMRDCLKQAASASDE*TY 879
T L + G WT EA L V + ++ R+ LK A E Y
Sbjct: 194 RRFTLLQLDGAWTREKFLEALGLAVKGAEYVYQVAREALKNKYMAIAEEIY 244
>sp|A0RXU1|ECX1_CENSY Probable exosome complex exonuclease 1 OS=Cenarchaeum
symbiosum GN=CENSYa_1536 PE=3 SV=1
Length = 243
Score = 119 bits (297), Expect = 4e-026
Identities = 66/223 (29%), Positives = 115/223 (51%), Gaps = 3/223 (1%)
Frame = +1
Query: 184 DLDWTRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRE-SKKATSYSD 360
D + R DGR + R + G ++ A+GSAY EFG+ K++ +FGPR+ K ++
Sbjct: 12 DENGIRCDGRKISETRRVEITAGVLNNANGSAYIEFGDNKILAGIFGPRDVHPKHMVRTE 71
Query: 361 VGGLNCNVSYTTFSSPALGSQGTDHK--EYSSMLLKALEGVIMMETFPKTTVDVFALVLE 534
G L C + FS + E S ++ +ALE +M+E FP+T VDVF VL+
Sbjct: 72 TGILRCRYHMSPFSVSERKKPAPSRREIEISKVIKEALEPSLMLEQFPRTAVDVFIEVLQ 131
Query: 535 SGGSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTC 714
+ G ++ A +ALADAGI M D+++A + + ++++D EE+ +
Sbjct: 132 ADGGSRCAALAAASVALADAGIPMRDMVSACAAGKVADTIVLDVNNEEDQAGQADMPVGY 191
Query: 715 MPSRSEITQLTITGEWTTPNINEATQLCVDACSKLGEIMRDCL 843
MP+ ++T + + G T + + +D C ++ E+ + L
Sbjct: 192 MPNLDQVTLIQLDGVLTPDEYSRCAAMAIDGCKQVYEVQKKAL 234
>sp|Q8U0L9|ECX1_PYRFU Probable exosome complex exonuclease 1 OS=Pyrococcus
furiosus GN=PF1568 PE=3 SV=1
Length = 250
Score = 119 bits (296), Expect = 5e-026
Identities = 75/225 (33%), Positives = 115/225 (51%), Gaps = 3/225 (1%)
Frame = +1
Query: 184 DLDWTRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRE-SKKATSYSD 360
D + R DGR ++ RP ++ G + A+GSAY E+G K+I +V+GPRE K D
Sbjct: 12 DENGRRLDGRKKYELRPIKMKVGVLKNANGSAYIEWGKNKIIAAVYGPREIHPKHLQRPD 71
Query: 361 VGGLNCNVSYTTFSSPALGSQGTDHK--EYSSMLLKALEGVIMMETFPKTTVDVFALVLE 534
L + FS G D + E S ++ ALE +++E FP+T +DVF VL+
Sbjct: 72 RAILRVRYNMAPFSVEERKKPGPDRRSIEISKVIRGALEPALILEMFPRTAIDVFIEVLQ 131
Query: 535 SGGSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTC 714
+ I+ A LALADAGI M DL+ A S I +++D EE+ + +
Sbjct: 132 ADAGTRVAGITAASLALADAGIPMRDLVAACSAGKIEGEIVLDLNKEEDNYGEADVPVAI 191
Query: 715 MPSRSEITQLTITGEWTTPNINEATQLCVDACSKLGEIMRDCLKQ 849
MP +++IT L + G T EA +L + + + R+ LK+
Sbjct: 192 MPIKNDITLLQMDGYLTKEEFIEAVKLAIKGAKAVYQKQREALKE 236
>sp|O59223|ECX1_PYRHO Probable exosome complex exonuclease 1 OS=Pyrococcus
horikoshii GN=PH1549 PE=3 SV=1
Length = 249
Score = 118 bits (295), Expect = 7e-026
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 3/225 (1%)
Frame = +1
Query: 184 DLDWTRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRE-SKKATSYSD 360
D + R DGR ++ RP ++ G + A+GSAY E+G K+I +V+GPRE K D
Sbjct: 12 DENGRRIDGRKKYELRPIKMKVGVLKNANGSAYIEWGRNKIIAAVYGPRELHSKHLQRPD 71
Query: 361 VGGLNCNVSYTTFSSPALGSQGTDHK--EYSSMLLKALEGVIMMETFPKTTVDVFALVLE 534
L + FS G D + E S ++ ALE +++E FP+T++DVF VL+
Sbjct: 72 RAILRVRYNMAPFSVEERKKPGPDRRSIEISKVIKGALEPALILEMFPRTSIDVFIEVLQ 131
Query: 535 SGGSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTC 714
+ I+ A LALADAGI M DL+ A + I +++D EE+ + +
Sbjct: 132 ADAGTRVAGITAASLALADAGIPMRDLVAACAAGKIEGEIVLDLNKEEDNYGEADVPVAI 191
Query: 715 MPSRSEITQLTITGEWTTPNINEATQLCVDACSKLGEIMRDCLKQ 849
MP +++IT L + G T EA +L + + + R+ LK+
Sbjct: 192 MPLKNDITLLQMDGYLTKEEFIEAVRLAIKGAKAVYQKQREALKE 236
>sp|Q9V119|ECX1_PYRAB Probable exosome complex exonuclease 1 OS=Pyrococcus
abyssi GN=PYRAB06100 PE=1 SV=1
Length = 249
Score = 118 bits (294), Expect = 9e-026
Identities = 74/225 (32%), Positives = 115/225 (51%), Gaps = 3/225 (1%)
Frame = +1
Query: 184 DLDWTRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRE-SKKATSYSD 360
D + R DGR ++ RP ++ G + A+GSAY E+G K+I +V+GPRE K D
Sbjct: 12 DENGRRIDGRKKYELRPIKMEVGVLKNANGSAYIEWGKNKIIAAVYGPRELHPKHLQRPD 71
Query: 361 VGGLNCNVSYTTFSSPALGSQGTDHK--EYSSMLLKALEGVIMMETFPKTTVDVFALVLE 534
L + FS G D + E S ++ ALE +++E FP+T +DVF VL+
Sbjct: 72 RAILRVRYNMAPFSVEERKKPGPDRRSIEISKVIKGALEPALILEMFPRTAIDVFIEVLQ 131
Query: 535 SGGSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTC 714
+ I+ A LALADAGI M DL+ A + I +++D EE+ + +
Sbjct: 132 ADAGTRVAGITAASLALADAGIPMRDLVAACAAGKIEGEIVLDLNKEEDNYGEADVPVAI 191
Query: 715 MPSRSEITQLTITGEWTTPNINEATQLCVDACSKLGEIMRDCLKQ 849
MP +++IT L + G T EA +L + + + R+ LK+
Sbjct: 192 MPLKNDITLLQMDGYLTKDEFIEAVKLAIKGAKAVYQKQREALKE 236
>sp|Q5JIR6|ECX1_PYRKO Probable exosome complex exonuclease 1 OS=Pyrococcus
kodakaraensis GN=TK1634 PE=3 SV=1
Length = 249
Score = 117 bits (292), Expect = 2e-025
Identities = 74/233 (31%), Positives = 116/233 (49%), Gaps = 3/233 (1%)
Frame = +1
Query: 160 RPPIFRGSDLDWTRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRE-S 336
RP + D + R DGR ++ RP ++ G + A GSAY E+G KV+ +V+GPRE
Sbjct: 4 RPEGLKLIDENGKRIDGRKKYELRPIKMEVGVLKNADGSAYVEWGKNKVLAAVYGPREIH 63
Query: 337 KKATSYSDVGGLNCNVSYTTFSSPALGSQGTDHK--EYSSMLLKALEGVIMMETFPKTTV 510
K D L + FS G D + E S ++ ALE +++ FP+T +
Sbjct: 64 PKHLQRPDRAILRVRYNMAPFSVEERKKPGPDRRSVEISKVIRGALEPALLLHMFPRTAI 123
Query: 511 DVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCE 690
DVF +L++ I+ A LALADAGI M DL+ A + I +++D EE+
Sbjct: 124 DVFIEILQADAGTRVAGITAASLALADAGIPMKDLVAACAAGKIDGEIVLDLNKEEDNYG 183
Query: 691 DGSFMMTCMPSRSEITQLTITGEWTTPNINEATQLCVDACSKLGEIMRDCLKQ 849
+ + MP +++IT L + G T EA +L + + + R+ LK+
Sbjct: 184 EADVPVAIMPLKNDITLLQMDGYLTKDEFLEAVRLAIKGAKAVYQKQREALKE 236
>sp|B6YSI2|ECX1_THEON Probable exosome complex exonuclease 1 OS=Thermococcus
onnurineus (strain NA1) GN=TON_0030 PE=3 SV=1
Length = 249
Score = 117 bits (292), Expect = 2e-025
Identities = 73/233 (31%), Positives = 117/233 (50%), Gaps = 3/233 (1%)
Frame = +1
Query: 160 RPPIFRGSDLDWTRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRE-S 336
+P + D + R DGR ++ RP ++ G + A GSAY E+G K++ +V+GPRE
Sbjct: 4 KPEDLKLIDENGRRIDGRKKYELRPIKMEVGVLKNADGSAYVEWGKNKILAAVYGPREIH 63
Query: 337 KKATSYSDVGGLNCNVSYTTFSSPALGSQGTDHK--EYSSMLLKALEGVIMMETFPKTTV 510
K D L + FS G D + E S ++ ALE +++E FP+T +
Sbjct: 64 PKHLQRPDRAILRVRYNMAPFSVEERKKPGPDRRSVEISKVIRGALEPALILEMFPRTAI 123
Query: 511 DVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCE 690
D+F VL++ I+ A LALADAGI M DL+ A + I +++D EE+
Sbjct: 124 DIFIEVLQADAGTRVAGITAASLALADAGIPMRDLVAACAAGKIEGEIVLDLNKEEDNYG 183
Query: 691 DGSFMMTCMPSRSEITQLTITGEWTTPNINEATQLCVDACSKLGEIMRDCLKQ 849
+ + MP +++IT L + G T EA +L + + + R+ LK+
Sbjct: 184 EADVPVAIMPLKNDITLLQMDGYLTRDEFIEAVRLAIKGAKAVYQKQREALKE 236
>sp|Q8ZVM9|ECX1_PYRAE Probable exosome complex exonuclease 1 OS=Pyrobaculum
aerophilum GN=PAE2207 PE=3 SV=1
Length = 246
Score = 116 bits (289), Expect = 4e-025
Identities = 74/220 (33%), Positives = 110/220 (50%), Gaps = 4/220 (1%)
Frame = +1
Query: 199 RPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRE-SKKATSYSDVGGLN 375
R DGR Q R + G VS A GSA +G T + +V+GPRE + S D G +
Sbjct: 14 RADGRTPDQMREVKIAVGVVSNADGSAMVSYGATTAVAAVYGPREMHPRHLSLPDRGVMR 73
Query: 376 CNVSYTTFSSPALGSQGTDHK---EYSSMLLKALEGVIMMETFPKTTVDVFALVLESGGS 546
FS+ T + E S +L +ALE I++E +P++ +DVF +L++ GS
Sbjct: 74 VRYHMAPFSTKDERKSPTPSRREIEISKILREALEPAIVLEQYPRSRIDVFVEILQADGS 133
Query: 547 DLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSR 726
++ A LALADAGI M DL+ VSV + ++++D E+ +G + MP+
Sbjct: 134 TRVASLTAASLALADAGIYMRDLVVGVSVGLVDGTVVLDLNGLEDQYGEGDLPLGYMPNL 193
Query: 727 SEITQLTITGEWTTPNINEATQLCVDACSKLGEIMRDCLK 846
T L + G WT +A L V + +I RD LK
Sbjct: 194 KRFTLLQLDGAWTRDMFLQALNLAVRGAEYVYQIARDALK 233
>sp|Q8TYC1|ECX1_METKA Probable exosome complex exonuclease 1 OS=Methanopyrus
kandleri GN=MK0381 PE=3 SV=1
Length = 239
Score = 115 bits (287), Expect = 6e-025
Identities = 71/223 (31%), Positives = 109/223 (48%), Gaps = 3/223 (1%)
Frame = +1
Query: 190 DWTRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRE-SKKATSYSDVG 366
D R DGR + RP +Q G + A GSAY E G K++ +V+GPRE + D
Sbjct: 12 DGLRLDGRKPDEMRPLKIQAGVLKRADGSAYLELGANKIVAAVYGPRELHPRHKQKPDRA 71
Query: 367 GLNCNVSYTTFSSPALGSQGTDHK--EYSSMLLKALEGVIMMETFPKTTVDVFALVLESG 540
+ + FS G D + E S + +ALE I E +P+T +D+F VL++
Sbjct: 72 VVRFRYNMAPFSVDERKRPGPDRRSIEISKLSKEALEPAIFTEYYPRTAIDIFVEVLQAD 131
Query: 541 GSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMP 720
IS A +ALADAGI M DL+ A + + +++DP+ E+G + + MP
Sbjct: 132 AGTRCAGISAASVALADAGIEMRDLVAACAAGKVEGKVVLDPMYYEDGYGEADVPLAMMP 191
Query: 721 SRSEITQLTITGEWTTPNINEATQLCVDACSKLGEIMRDCLKQ 849
+IT L + G+ T +A +L C + + R LK+
Sbjct: 192 KEGKITLLQMDGDMTPGEFKQAVKLAKKGCKIVYKEQRRALKE 234
>sp|C5A2B9|ECX1_THEGJ Probable exosome complex exonuclease 1 OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=TGAM_2036 PE=3
SV=1
Length = 249
Score = 115 bits (287), Expect = 6e-025
Identities = 73/233 (31%), Positives = 116/233 (49%), Gaps = 3/233 (1%)
Frame = +1
Query: 160 RPPIFRGSDLDWTRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRE-S 336
RP + D + R DGR ++ R ++ G + A GSAY E+G K++ +V+GPRE
Sbjct: 4 RPEGLKLIDENGRRIDGRRKYELRKIHMEVGVLKNADGSAYIEWGKNKILAAVYGPREIH 63
Query: 337 KKATSYSDVGGLNCNVSYTTFSSPALGSQGTDHK--EYSSMLLKALEGVIMMETFPKTTV 510
K D L + FS G D + E S ++ ALE +++E FP+T V
Sbjct: 64 PKHLQRPDTAVLRVRYNMAPFSVEERKKPGPDRRSVEISKVIRGALEPALILEMFPRTVV 123
Query: 511 DVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCE 690
DVF VL++ I+ A LALADAG+ M DL+ A + I +++D +E+
Sbjct: 124 DVFIEVLQADAGTRVAGITAASLALADAGVPMRDLVAACAAGKIDGEIVLDLNKDEDNYG 183
Query: 691 DGSFMMTCMPSRSEITQLTITGEWTTPNINEATQLCVDACSKLGEIMRDCLKQ 849
+ + MP +++IT L + G T EA +L + + + R+ LK+
Sbjct: 184 EADVPVAIMPLKNDITLLQMDGYLTKEEFIEAVKLAIKGAKAVYQKQREALKE 236
>sp|B1Y978|ECX1_THENV Probable exosome complex exonuclease 1 OS=Thermoproteus
neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=Tneu_1381 PE=3
SV=1
Length = 246
Score = 115 bits (287), Expect = 6e-025
Identities = 78/248 (31%), Positives = 118/248 (47%), Gaps = 8/248 (3%)
Frame = +1
Query: 148 MARTRPPIFRGSDLDWTRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGP 327
M + P+ +G R DGR Q R + G +S A GSA +G T + +V+GP
Sbjct: 1 MKKPPVPLLQGG----VRADGRAPDQMREVQISVGVISNADGSAMVSYGATTAVAAVYGP 56
Query: 328 RE-SKKATSYSDVGGLNCNVSYTTFSSPALGSQGTDHK---EYSSMLLKALEGVIMMETF 495
RE + S D G + FS+ T + E S +L +ALE +M+E +
Sbjct: 57 REMHPRHLSLPDRGVMRVRYHMAPFSTKDERKSPTPSRREIEISKVLREALEPAVMLEQY 116
Query: 496 PKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTE 675
P++ +DVF +L++ GS ++ A LALADAGI M DL+ VSV + ++++D
Sbjct: 117 PRSRIDVFIEILQADGSTRVASLTAASLALADAGIYMRDLVIGVSVGLVDGTVVLDLNGL 176
Query: 676 EEGCEDGSFMMTCMPSRSEITQLTITGEWTTPNINEATQLCVDACSKLGEIMRDCLKQAA 855
E+ +G + MP+ T L + G W + EA L V + + RD LK
Sbjct: 177 EDQYGEGDLPVGYMPNLRRYTLLQLDGAWGRDKLLEALNLAVKGAEFVYQKARDALKNRY 236
Query: 856 SASDE*TY 879
A E Y
Sbjct: 237 MAIAEEIY 244
>sp|Q4JB27|ECX1_SULAC Probable exosome complex exonuclease 1 OS=Sulfolobus
acidocaldarius GN=Saci_0610 PE=3 SV=1
Length = 243
Score = 114 bits (284), Expect = 1e-024
Identities = 69/219 (31%), Positives = 109/219 (49%), Gaps = 3/219 (1%)
Frame = +1
Query: 199 RPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRE-SKKATSYSDVGGLN 375
R DGR + RP ++ G + A GSA E GNTKVI +V+GP+E + + D L
Sbjct: 16 RTDGRKLDELRPIKIELGVLKNADGSAIFEMGNTKVIAAVYGPKEMHPRHLALPDKASLR 75
Query: 376 CNVSYTTFSSPALGSQGTDHK--EYSSMLLKALEGVIMMETFPKTTVDVFALVLESGGSD 549
T FS+ + + E S ++ +ALE I++ FP+T +D+F VL++
Sbjct: 76 VRYHMTPFSTDERKNPAPSRREIELSKVIREALESTILLNLFPRTVIDIFMEVLQADAGT 135
Query: 550 LPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRS 729
V + A +ALADAGI M DLI V+V SL++D +E+ + + +PS
Sbjct: 136 RLVALMAASMALADAGIPMRDLIAGVAVGKADGSLVLDLNEQEDMWGEADMPIAVLPSLG 195
Query: 730 EITQLTITGEWTTPNINEATQLCVDACSKLGEIMRDCLK 846
++ L + G T A +L S + + ++ LK
Sbjct: 196 QVVLLQLNGFMTPDEFRRAFELAQKGISSIYALQKEALK 234
>sp|Q9HIP2|ECX1_THEAC Probable exosome complex exonuclease 1 OS=Thermoplasma
acidophilum GN=Ta1293 PE=3 SV=1
Length = 248
Score = 114 bits (283), Expect = 2e-024
Identities = 64/221 (28%), Positives = 114/221 (51%), Gaps = 3/221 (1%)
Frame = +1
Query: 190 DWTRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRES-KKATSYSDVG 366
D R DGR F++ RP +Q G ++ A GSAY E+G K++V V+GP+E+ K + D
Sbjct: 15 DNLRLDGRSFNELRPIKIQAGVLNRADGSAYIEWGGNKIMVGVYGPKEAYPKHSQDIDHA 74
Query: 367 GLNCNVSYTTFSSPALGSQGTDHK--EYSSMLLKALEGVIMMETFPKTTVDVFALVLESG 540
+ + FS G D + E S ++ +AL IM+E FP+ +DV+ VL++
Sbjct: 75 IVKARYNMAAFSVDERKRPGPDRRTMEISKVISEALSSSIMIEQFPRAEIDVYIEVLQAD 134
Query: 541 GSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMP 720
++ A +ALADAG+ M D++ + + +++D EE+ + + MP
Sbjct: 135 AGTRIAGLTAATVALADAGVPMRDMVVGCTAGKVDGHMVLDLSKEEDNYGEADIPIAIMP 194
Query: 721 SRSEITQLTITGEWTTPNINEATQLCVDACSKLGEIMRDCL 843
+I + + G+ T + +A + +A ++ +I R+ L
Sbjct: 195 KTGDIVLMQMDGDVTEDELYQAMDMIFEATKRISQIQREAL 235
>sp|A1RST0|ECX1_PYRIL Probable exosome complex exonuclease 1 OS=Pyrobaculum
islandicum (strain DSM 4184 / JCM 9189) GN=Pisl_0836 PE=3 SV=1
Length = 246
Score = 113 bits (282), Expect = 2e-024
Identities = 74/237 (31%), Positives = 115/237 (48%), Gaps = 8/237 (3%)
Frame = +1
Query: 148 MARTRPPIFRGSDLDWTRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGP 327
M + P+F+ R DGR Q R + G VS A GSA +G T + +V+GP
Sbjct: 1 MKKPPVPLFQNG----VRADGRAPDQMREVNITVGIVSNADGSAMVSYGATTAVAAVYGP 56
Query: 328 RE-SKKATSYSDVGGLNCNVSYTTFSSPALGSQGTDHK---EYSSMLLKALEGVIMMETF 495
RE + S D G + FS+ T + E S +L +ALE +++E +
Sbjct: 57 REMHPRHLSLPDRGVMRVRYHMAPFSTKDERKSPTPTRREIEISKILREALEPAVVLEQY 116
Query: 496 PKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTE 675
P++ +DVF +L++ GS ++ A LALADAG+ M DL+ VSV + ++++D
Sbjct: 117 PRSRIDVFIEILQADGSTRVASLTAASLALADAGVYMRDLVIGVSVGLVDGAVVLDLNGL 176
Query: 676 EEGCEDGSFMMTCMPSRSEITQLTITGEWTTPNINEATQLCVDACSKLGEIMRDCLK 846
E+ +G + MP+ T L + G WT EA L + + + RD LK
Sbjct: 177 EDQYGEGDLPVGYMPNLKRFTLLQLDGAWTRDKFLEALNLAIKGAEFVYQKARDALK 233
>sp|A2BKC0|ECX1_HYPBU Probable exosome complex exonuclease 1 OS=Hyperthermus
butylicus (strain DSM 5456 / JCM 9403) GN=Hbut_0571 PE=3 SV=1
Length = 255
Score = 113 bits (281), Expect = 3e-024
Identities = 72/240 (30%), Positives = 119/240 (49%), Gaps = 7/240 (2%)
Frame = +1
Query: 151 ARTRPPIFRGSDLDW----TRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSV 318
A +P + R + D R DGR Q RP ++ G +S A GSA E+G T+VI +V
Sbjct: 5 AGEKPTLIRWEERDGQKVAIRHDGRLPEQLRPIRMEVGVLSNADGSALVEYGGTRVIAAV 64
Query: 319 FGPRES-KKATSYSDVGGLNCNVSYTTFSSPALGSQGTDHK--EYSSMLLKALEGVIMME 489
+GPRE+ + + D + C FS+ + + E S ++ +ALE V++ E
Sbjct: 65 YGPREAHPRHVALPDRAIIRCRYHMAPFSTAERKTPAPTRREVELSKVIREALEAVVISE 124
Query: 490 TFPKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPV 669
+P+T +DV+ VL+S G I+ A LALADAGI M DL+ V+V + L++D
Sbjct: 125 LYPRTAIDVYMEVLQSDGGTRTAAITAASLALADAGIAMRDLVAGVAVGKVDGVLVLDID 184
Query: 670 TEEEGCEDGSFMMTCMPSRSEITQLTITGEWTTPNINEATQLCVDACSKLGEIMRDCLKQ 849
E+ + + PS ++ L + G T +A +L + + ++ L++
Sbjct: 185 EIEDNYAEADMPVAMAPSLDKVLLLQLNGVLTHDEFVKALELARKGIQVIYNLQKEALRK 244
>sp|Q6P0I8|EXOS6_DANRE Exosome complex exonuclease MTR3 OS=Danio rerio GN=exosc6
PE=2 SV=2
Length = 271
Score = 113 bits (281), Expect = 3e-024
Identities = 61/165 (36%), Positives = 97/165 (58%), Gaps = 3/165 (1%)
Frame = +1
Query: 196 TRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRESKKATSYS-DVGGL 372
+R RG RP + G VS A GSAY E GNTK+I SV+GP+E+++ G L
Sbjct: 32 SRQGVRGNGDVRPVFARCGLVSQAKGSAYIEAGNTKIICSVYGPKETERRDETDMKTGRL 91
Query: 373 NCNVSYTTFSSPALGS--QGTDHKEYSSMLLKALEGVIMMETFPKTTVDVFALVLESGGS 546
C+ FS G+ QG++ ++ S+ L+++L + + +P++ +DV +VLE+ GS
Sbjct: 92 VCDFRLAPFSCVKRGAWIQGSEERDLSATLMESLRPGVCLHRYPRSQIDVNVMVLENDGS 151
Query: 547 DLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEE 681
L ++CA +ALADAGI MYD++ ++ G + ++DP EE
Sbjct: 152 VLAHAVTCASMALADAGIEMYDIVLGCTLRQSGNACLVDPSYAEE 196
>sp|Q9UXC2|ECX1_SULSO Probable exosome complex exonuclease 1 OS=Sulfolobus
solfataricus GN=SSO0735 PE=1 SV=1
Length = 248
Score = 110 bits (274), Expect = 2e-023
Identities = 70/222 (31%), Positives = 109/222 (49%), Gaps = 3/222 (1%)
Frame = +1
Query: 190 DWTRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRE-SKKATSYSDVG 366
D R DGR + R ++ G + A GSA E GNTK I +V+GP+E + S D
Sbjct: 16 DGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPDRA 75
Query: 367 GLNCNVSYTTFSSPALGSQGTDHK--EYSSMLLKALEGVIMMETFPKTTVDVFALVLESG 540
L T FS+ + + E S ++ +ALE +++E FP+T +DVF +L++
Sbjct: 76 VLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVFTEILQAD 135
Query: 541 GSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMP 720
V + A LALADAGI M DLI V+V +++D E+ + + MP
Sbjct: 136 AGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIILDLNETEDMWGEADMPIAMMP 195
Query: 721 SRSEITQLTITGEWTTPNINEATQLCVDACSKLGEIMRDCLK 846
S +++T + G T +A L V + + + R+ LK
Sbjct: 196 SLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALK 237
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,099,029,888
Number of Sequences: 518415
Number of Extensions: 26099029888
Number of Successful Extensions: 175876120
Number of sequences better than 0.0: 0
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