BLASTX 7.6.2
Query= UN06581 /QuerySize=844
(843 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15219941|ref|NP_176347.1| light-harvesting complex I chloroph... 83 4e-014
gi|79320443|ref|NP_001031217.1| light-harvesting complex I chlor... 83 4e-014
gi|430947|gb|AAA18206.1| PSI type III chlorophyll a/b-binding pr... 83 4e-014
gi|21554335|gb|AAM63442.1| PSI type III chlorophyll a/b-binding ... 83 4e-014
gi|297840405|ref|XP_002888084.1| hypothetical protein ARALYDRAFT... 83 4e-014
gi|125656346|gb|ABN48563.1| chloroplast PSI type III chlorophyll... 83 5e-014
gi|255567170|ref|XP_002524566.1| chlorophyll A/B binding protein... 83 5e-014
gi|312281797|dbj|BAJ33764.1| unnamed protein product [Thellungie... 83 5e-014
gi|75220641|sp|Q32904.1|CB23_PEA RecName: Full=Chlorophyll a-b b... 82 9e-014
gi|195613254|gb|ACG28457.1| chlorophyll a-b binding protein 8 [Z... 82 1e-013
gi|226496924|ref|NP_001148598.1| chlorophyll a-b binding protein... 82 1e-013
gi|115813|sp|P27522.1|CB13_SOLLC RecName: Full=Chlorophyll a-b b... 81 2e-013
gi|226872|prf||1609235A chlorophyll a/b binding protein 81 2e-013
gi|162423646|gb|ABX89589.1| Lhca3 [Solanum tuberosum] 81 2e-013
gi|110736814|dbj|BAF00366.1| PSI type III chlorophyll a/b-bindin... 80 3e-013
gi|224131950|ref|XP_002321218.1| light-harvesting complex I prot... 80 3e-013
gi|118489937|gb|ABK96765.1| unknown [Populus trichocarpa x Popul... 80 3e-013
gi|40455722|gb|AAR85970.1| type III chlorophyll a/b-binding prot... 80 3e-013
gi|116519121|gb|ABJ99590.1| type III chlorophyll a/b-binding pro... 80 3e-013
gi|116519125|gb|ABJ99591.1| type III chlorophyll a/b-binding pro... 80 3e-013
>gi|15219941|ref|NP_176347.1| light-harvesting complex I chlorophyll a/b binding
protein 3 [Arabidopsis thaliana]
Length = 273
Score = 83 bits (204), Expect = 4e-014
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = -3
Query: 292 LVVILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 170
++ ILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 233 MLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273
>gi|79320443|ref|NP_001031217.1| light-harvesting complex I chlorophyll a/b
binding protein 3 [Arabidopsis thaliana]
Length = 218
Score = 83 bits (204), Expect = 4e-014
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = -3
Query: 292 LVVILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 170
++ ILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 178 MLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 218
>gi|430947|gb|AAA18206.1| PSI type III chlorophyll a/b-binding protein
[Arabidopsis thaliana]
Length = 273
Score = 83 bits (204), Expect = 4e-014
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = -3
Query: 292 LVVILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 170
++ ILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 233 MLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273
>gi|21554335|gb|AAM63442.1| PSI type III chlorophyll a/b-binding protein,
putative [Arabidopsis thaliana]
Length = 273
Score = 83 bits (204), Expect = 4e-014
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = -3
Query: 292 LVVILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 170
++ ILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 233 MLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273
>gi|297840405|ref|XP_002888084.1| hypothetical protein ARALYDRAFT_475174
[Arabidopsis lyrata subsp. lyrata]
Length = 273
Score = 83 bits (204), Expect = 4e-014
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = -3
Query: 292 LVVILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 170
++ ILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 233 MLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273
>gi|125656346|gb|ABN48563.1| chloroplast PSI type III chlorophyll a/b-binding
protein [Brassica juncea]
Length = 110
Score = 83 bits (203), Expect = 5e-014
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = -3
Query: 292 LVVILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 170
++ ILGYF+QGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 70 MLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 110
>gi|255567170|ref|XP_002524566.1| chlorophyll A/B binding protein, putative
[Ricinus communis]
Length = 273
Score = 83 bits (203), Expect = 5e-014
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = -3
Query: 292 LVVILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 170
++ ILGYF+QGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 233 MLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273
>gi|312281797|dbj|BAJ33764.1| unnamed protein product [Thellungiella halophila]
Length = 273
Score = 83 bits (203), Expect = 5e-014
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = -3
Query: 292 LVVILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 170
++ ILGYF+QGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 233 MLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273
>gi|75220641|sp|Q32904.1|CB23_PEA RecName: Full=Chlorophyll a-b binding protein
3, chloroplastic; AltName: Full=LHCII type III CAB-3; Flags: Precursor
Length = 275
Score = 82 bits (201), Expect = 9e-014
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = -3
Query: 292 LVVILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 170
++ ILGYFIQGLVTGVGPYQNLLDH+ADPVNNNVLTSLKFH
Sbjct: 235 MLAILGYFIQGLVTGVGPYQNLLDHVADPVNNNVLTSLKFH 275
>gi|195613254|gb|ACG28457.1| chlorophyll a-b binding protein 8 [Zea mays]
Length = 267
Score = 82 bits (200), Expect = 1e-013
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = -3
Query: 292 LVVILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 170
++ ILGYFIQGLVTGVGP+QNLLDHLADPVNNNVLTSLKFH
Sbjct: 227 MLAILGYFIQGLVTGVGPFQNLLDHLADPVNNNVLTSLKFH 267
>gi|226496924|ref|NP_001148598.1| chlorophyll a-b binding protein 8 [Zea mays]
Length = 151
Score = 82 bits (200), Expect = 1e-013
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = -3
Query: 292 LVVILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 170
++ ILGYFIQGLVTGVGP+QNLLDHLADPVNNNVLTSLKFH
Sbjct: 111 MLAILGYFIQGLVTGVGPFQNLLDHLADPVNNNVLTSLKFH 151
>gi|115813|sp|P27522.1|CB13_SOLLC RecName: Full=Chlorophyll a-b binding protein
8, chloroplastic; AltName: Full=LHCI type III CAB-8; Flags: Precursor
Length = 273
Score = 81 bits (198), Expect = 2e-013
Identities = 37/41 (90%), Positives = 39/41 (95%)
Frame = -3
Query: 292 LVVILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 170
++ ILGYFIQ LVTGVGPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 233 MLAILGYFIQALVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273
>gi|226872|prf||1609235A chlorophyll a/b binding protein
Length = 273
Score = 81 bits (198), Expect = 2e-013
Identities = 37/41 (90%), Positives = 39/41 (95%)
Frame = -3
Query: 292 LVVILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 170
++ ILGYFIQ LVTGVGPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 233 MLAILGYFIQALVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273
>gi|162423646|gb|ABX89589.1| Lhca3 [Solanum tuberosum]
Length = 45
Score = 81 bits (198), Expect = 2e-013
Identities = 37/41 (90%), Positives = 39/41 (95%)
Frame = -3
Query: 292 LVVILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 170
++ ILGYFIQ LVTGVGPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 5 MLAILGYFIQALVTGVGPYQNLLDHLADPVNNNVLTSLKFH 45
>gi|110736814|dbj|BAF00366.1| PSI type III chlorophyll a/b-binding protein
[Arabidopsis thaliana]
Length = 273
Score = 80 bits (197), Expect = 3e-013
Identities = 37/41 (90%), Positives = 39/41 (95%)
Frame = -3
Query: 292 LVVILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 170
++ ILGYFIQGLVTGVGPYQNLLDHLA PVNNNVLTSLKFH
Sbjct: 233 MLAILGYFIQGLVTGVGPYQNLLDHLAGPVNNNVLTSLKFH 273
>gi|224131950|ref|XP_002321218.1| light-harvesting complex I protein Lhca3
[Populus trichocarpa]
Length = 274
Score = 80 bits (197), Expect = 3e-013
Identities = 35/41 (85%), Positives = 40/41 (97%)
Frame = -3
Query: 292 LVVILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 170
++ ILGYF+QGLVTGVGPYQNLLDHLADPV+NN+LTSLKFH
Sbjct: 234 MLAILGYFVQGLVTGVGPYQNLLDHLADPVHNNILTSLKFH 274
>gi|118489937|gb|ABK96765.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 274
Score = 80 bits (197), Expect = 3e-013
Identities = 35/41 (85%), Positives = 40/41 (97%)
Frame = -3
Query: 292 LVVILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 170
++ ILGYF+QGLVTGVGPYQNLLDHLADPV+NN+LTSLKFH
Sbjct: 234 MLAILGYFVQGLVTGVGPYQNLLDHLADPVHNNILTSLKFH 274
>gi|40455722|gb|AAR85970.1| type III chlorophyll a/b-binding protein [Nicotiana
tabacum]
Length = 85
Score = 80 bits (196), Expect = 3e-013
Identities = 35/41 (85%), Positives = 39/41 (95%)
Frame = -3
Query: 292 LVVILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 170
++ ILGYFIQGLVTGVGPYQNLLDHLADPVNNN+LT+ KFH
Sbjct: 45 MLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNILTNFKFH 85
>gi|116519121|gb|ABJ99590.1| type III chlorophyll a/b-binding protein [Lycoris
aurea]
Length = 275
Score = 80 bits (196), Expect = 3e-013
Identities = 36/41 (87%), Positives = 40/41 (97%)
Frame = -3
Query: 292 LVVILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 170
++ ILG+FIQGLVTGVGP+QNLLDHLADPVNNNVLTSLKFH
Sbjct: 235 MLAILGFFIQGLVTGVGPFQNLLDHLADPVNNNVLTSLKFH 275
>gi|116519125|gb|ABJ99591.1| type III chlorophyll a/b-binding protein [Lycoris
aurea]
Length = 275
Score = 80 bits (196), Expect = 3e-013
Identities = 36/41 (87%), Positives = 40/41 (97%)
Frame = -3
Query: 292 LVVILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 170
++ ILG+FIQGLVTGVGP+QNLLDHLADPVNNNVLTSLKFH
Sbjct: 235 MLAILGFFIQGLVTGVGPFQNLLDHLADPVNNNVLTSLKFH 275
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 748,178,612,197
Number of Sequences: 15229318
Number of Extensions: 748178612197
Number of Successful Extensions: 201585142
Number of sequences better than 0.0: 0
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