BLASTX 7.6.2
Query= UN06581 /QuerySize=844
(843 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G61520.1 | Symbols: LHCA3 | LHCA3; chlorophyll... 84 1e-016
TAIR9_protein||AT1G61520.2 | Symbols: LHCA3 | LHCA3; chlorophyll... 84 1e-016
TAIR9_protein||AT1G29910.1 | Symbols: CAB3, AB180, LHCB1.2 | CAB... 50 1e-006
TAIR9_protein||AT1G29920.1 | Symbols: CAB2, AB165, LHCB1.1 | CAB... 50 1e-006
TAIR9_protein||AT1G29930.1 | Symbols: CAB1, AB140, CAB140, LHCB1... 50 1e-006
TAIR9_protein||AT2G34430.1 | Symbols: LHB1B1, LHCB1.4 | LHB1B1; ... 50 1e-006
TAIR9_protein||AT2G34420.1 | Symbols: LHB1B2, LHCB1.5 | LHB1B2; ... 50 1e-006
TAIR9_protein||AT2G05100.1 | Symbols: LHCB2.1, LHCB2 | LHCB2.1; ... 48 8e-006
TAIR9_protein||AT2G05070.1 | Symbols: LHCB2.2, LHCB2 | LHCB2.2; ... 48 8e-006
>TAIR9_protein||AT1G61520.1 | Symbols: LHCA3 | LHCA3; chlorophyll binding |
chr1:22700152-22701149 FORWARD
Length = 274
Score = 84 bits (205), Expect = 1e-016
Identities = 38/42 (90%), Positives = 40/42 (95%)
Frame = -3
Query: 292 LVVILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH* 167
++ ILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH*
Sbjct: 233 MLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH* 274
>TAIR9_protein||AT1G61520.2 | Symbols: LHCA3 | LHCA3; chlorophyll binding |
chr1:22700493-22701149 FORWARD
Length = 219
Score = 84 bits (205), Expect = 1e-016
Identities = 38/42 (90%), Positives = 40/42 (95%)
Frame = -3
Query: 292 LVVILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH* 167
++ ILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH*
Sbjct: 178 MLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH* 219
>TAIR9_protein||AT1G29910.1 | Symbols: CAB3, AB180, LHCB1.2 | CAB3 (CHLOROPHYLL
A/B BINDING PROTEIN 3); chlorophyll binding | chr1:10472443-10473246
REVERSE
Length = 268
Score = 50 bits (119), Expect = 1e-006
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = -3
Query: 283 ILGYFIQGLVTGVGPYQNLLDHLADPVNNN 194
+ G+F+Q +VTG GP +NL DHLADPVNNN
Sbjct: 226 MFGFFVQAIVTGKGPIENLADHLADPVNNN 255
>TAIR9_protein||AT1G29920.1 | Symbols: CAB2, AB165, LHCB1.1 | CAB2 (CHLOROPHYLL
A/B-BINDING PROTEIN 2); chlorophyll binding | chr1:10475089-10475892
REVERSE
Length = 268
Score = 50 bits (119), Expect = 1e-006
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = -3
Query: 283 ILGYFIQGLVTGVGPYQNLLDHLADPVNNN 194
+ G+F+Q +VTG GP +NL DHLADPVNNN
Sbjct: 226 MFGFFVQAIVTGKGPIENLADHLADPVNNN 255
>TAIR9_protein||AT1G29930.1 | Symbols: CAB1, AB140, CAB140, LHCB1.3 | CAB1
(CHLOROPHYLL A/B BINDING PROTEIN 1); chlorophyll binding |
chr1:10478071-10478874 FORWARD
Length = 268
Score = 50 bits (119), Expect = 1e-006
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = -3
Query: 283 ILGYFIQGLVTGVGPYQNLLDHLADPVNNN 194
+ G+F+Q +VTG GP +NL DHLADPVNNN
Sbjct: 226 MFGFFVQAIVTGKGPIENLADHLADPVNNN 255
>TAIR9_protein||AT2G34430.1 | Symbols: LHB1B1, LHCB1.4 | LHB1B1; chlorophyll
binding | chr2:14524818-14525618 FORWARD
Length = 267
Score = 50 bits (119), Expect = 1e-006
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = -3
Query: 283 ILGYFIQGLVTGVGPYQNLLDHLADPVNNN 194
+ G+F+Q +VTG GP +NL DHLADPVNNN
Sbjct: 225 MFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>TAIR9_protein||AT2G34420.1 | Symbols: LHB1B2, LHCB1.5 | LHB1B2; chlorophyll
binding | chr2:14522716-14523513 REVERSE
Length = 266
Score = 50 bits (119), Expect = 1e-006
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = -3
Query: 283 ILGYFIQGLVTGVGPYQNLLDHLADPVNNN 194
+ G+F+Q +VTG GP +NL DHLADPVNNN
Sbjct: 224 MFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>TAIR9_protein||AT2G05100.1 | Symbols: LHCB2.1, LHCB2 | LHCB2.1; chlorophyll
binding | chr2:1823449-1824331 REVERSE
Length = 266
Score = 48 bits (112), Expect = 8e-006
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = -3
Query: 283 ILGYFIQGLVTGVGPYQNLLDHLADPVNNN 194
+ G+F+Q +VTG GP +NL DHLADPV NN
Sbjct: 224 MFGFFVQAIVTGKGPIENLFDHLADPVANN 253
>TAIR9_protein||AT2G05070.1 | Symbols: LHCB2.2, LHCB2 | LHCB2.2; chlorophyll
binding | chr2:1799436-1800329 REVERSE
Length = 266
Score = 48 bits (112), Expect = 8e-006
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = -3
Query: 283 ILGYFIQGLVTGVGPYQNLLDHLADPVNNN 194
+ G+F+Q +VTG GP +NL DHLADPV NN
Sbjct: 224 MFGFFVQAIVTGKGPIENLFDHLADPVANN 253
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,955,443,530
Number of Sequences: 33410
Number of Extensions: 3955443530
Number of Successful Extensions: 152801959
Number of sequences better than 0.0: 0
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