BLASTX 7.6.2
Query= UN06616 /QuerySize=1153
(1152 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9SKT0|THF1_ARATH Protein THYLAKOID FORMATION 1, chloroplasti... 459 2e-128
sp|Q7XAB8|THF1_SOLTU Protein THYLAKOID FORMATION1, chloroplastic... 389 2e-107
sp|Q84PB7|THF1_ORYSJ Protein THYLAKOID FORMATION1, chloroplastic... 361 6e-099
sp|B8HQ62|THF1_CYAP4 Protein thf1 OS=Cyanothece sp. (strain PCC ... 139 3e-032
sp|Q31MY4|THF1_SYNE7 Protein thf1 OS=Synechococcus elongatus (st... 136 5e-031
sp|Q5N664|THF1_SYNP6 Protein thf1 OS=Synechococcus sp. (strain A... 136 5e-031
sp|Q8DJT8|THF1_THEEB Protein thf1 OS=Thermosynechococcus elongat... 133 3e-030
sp|B7KI38|THF1_CYAP7 Protein thf1 OS=Cyanothece sp. (strain PCC ... 131 2e-029
sp|P73956|THF1_SYNY3 Protein thf1 OS=Synechocystis sp. (strain P... 122 4e-027
sp|B0C3M8|THF1_ACAM1 Protein thf1 OS=Acaryochloris marina (strai... 121 2e-026
sp|Q116P5|THF1_TRIEI Protein thf1 OS=Trichodesmium erythraeum (s... 119 4e-026
sp|B1XHY6|THF1_SYNP2 Protein thf1 OS=Synechococcus sp. (strain A... 107 2e-022
sp|B7K277|THF1_CYAP8 Protein thf1 OS=Cyanothece sp. (strain PCC ... 103 3e-021
sp|P0C1D1|THF1_SYNJB Protein thf1 OS=Synechococcus sp. GN=thf1 P... 97 1e-019
sp|Q2JSQ3|THF1_SYNJA Protein thf1 OS=Synechococcus sp. (strain J... 94 2e-018
sp|A9BAB2|THF1_PROM4 Protein thf1 OS=Prochlorococcus marinus (st... 88 1e-016
sp|Q7V1W1|THF1_PROMP Protein thf1 OS=Prochlorococcus marinus sub... 70 2e-011
sp|Q7NKS7|THF1_GLOVI Protein thf1 OS=Gloeobacter violaceus GN=th... 57 3e-007
>sp|Q9SKT0|THF1_ARATH Protein THYLAKOID FORMATION 1, chloroplastic
OS=Arabidopsis thaliana GN=THF1 PE=1 SV=1
Length = 300
Score = 459 bits (1180), Expect = 2e-128
Identities = 247/300 (82%), Positives = 266/300 (88%), Gaps = 9/300 (3%)
Frame = -3
Query: 1030 AAAIASLSFPALGQSAKISNSTTPSLPLASVSAISRRISRHSLTSSRASTSSSKLIIHCM 851
A AI+SLSFPALGQS KISN + S PLAS I + SR SL S S+SK +IHCM
Sbjct: 3 ATAISSLSFPALGQSDKISNFAS-SRPLASAIRICTKFSRLSLN----SRSTSKSLIHCM 57
Query: 850 SSVT-DVPPVSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFV 674
S+VT DVPPVSETKS FLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFV
Sbjct: 58 SNVTADVPPVSETKSKFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFV 117
Query: 673 TVYDQLMDGYPSDQDRDSIFQAYVQALNEDPNQYRTDAQKMEEWARSQTFASLVDFSSKE 494
TVYDQLM+GYPSDQDRD+IF+AY++ALNEDP QYR DAQKMEEWARSQT ASLVDFSSKE
Sbjct: 118 TVYDQLMEGYPSDQDRDAIFKAYIEALNEDPKQYRIDAQKMEEWARSQTSASLVDFSSKE 177
Query: 493 GEVEAIFKDISERAGSKEGFSYSRFFAVGLFRLLELAGATDPTVLDKLCASLNINKKSVD 314
G++EA+ KDI+ RAGSKEGFSYSRFFAVGLFRLLELA ATDPTVLDKLCASLNINKKSVD
Sbjct: 178 GDIEAVLKDIAGRAGSKEGFSYSRFFAVGLFRLLELASATDPTVLDKLCASLNINKKSVD 237
Query: 313 RDLDVYRNLLSKLVQAKELLKEYVEREKKKRGERAAESQKANESISKSLGDN--SLSFLV 140
RDLDVYRNLLSKLVQAKELLKEYVEREKKK+GER A+SQKANE+ISK LGD + SFLV
Sbjct: 238 RDLDVYRNLLSKLVQAKELLKEYVEREKKKQGER-AQSQKANETISKCLGDTLYNPSFLV 296
>sp|Q7XAB8|THF1_SOLTU Protein THYLAKOID FORMATION1, chloroplastic OS=Solanum
tuberosum GN=THF1 PE=2 SV=1
Length = 293
Score = 389 bits (999), Expect = 2e-107
Identities = 199/292 (68%), Positives = 243/292 (83%), Gaps = 9/292 (3%)
Frame = -3
Query: 1027 AAIASLSFPALGQSAKISNSTTPSLPLASVSAISRRISRHSLTS--SRASTSSSKLIIHC 854
AA+ S+SF A+ QSA+ +S + S + + R S S S R+S S+S+ ++HC
Sbjct: 2 AAVTSVSFSAITQSAERKSSVSSSRSIDTF----RFRSNFSFDSVNVRSSNSTSRFVVHC 57
Query: 853 -MSSVTDVPPVSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGF 677
SS D+P V++TK FL AYKRPIP++YNTVLQELIVQQHL RYKK+Y+YDPVFALGF
Sbjct: 58 TSSSAADLPTVADTKLKFLTAYKRPIPTVYNTVLQELIVQQHLTRYKKSYQYDPVFALGF 117
Query: 676 VTVYDQLMDGYPSDQDRDSIFQAYVQALNEDPNQYRTDAQKMEEWARSQTFASLVDFSSK 497
VTVYDQLM+GYPS++DR++IF+AY++AL EDP QYR DAQK+EEWAR+Q +LVDFSSK
Sbjct: 118 VTVYDQLMEGYPSEEDRNAIFKAYIEALKEDPEQYRADAQKLEEWARTQNANTLVDFSSK 177
Query: 496 EGEVEAIFKDISERAGSKEGFSYSRFFAVGLFRLLELAGATDPTVLDKLCASLNINKKSV 317
EGE+E IFKDI++RAG+K+GF YSR FAVGLFRLLELA TDPT+L+KLCA+LN+NKKSV
Sbjct: 178 EGEIENIFKDIAQRAGTKDGFCYSRLFAVGLFRLLELANVTDPTILEKLCAALNVNKKSV 237
Query: 316 DRDLDVYRNLLSKLVQAKELLKEYVEREKKKRGERAAESQKANESISKSLGD 161
DRDLDVYRNLLSKLVQAKELLKEYVEREKKKRGER E+QKANE+++K LGD
Sbjct: 238 DRDLDVYRNLLSKLVQAKELLKEYVEREKKKRGER--ETQKANETVTKCLGD 287
>sp|Q84PB7|THF1_ORYSJ Protein THYLAKOID FORMATION1, chloroplastic OS=Oryza
sativa subsp. japonica GN=THF1 PE=2 SV=1
Length = 287
Score = 361 bits (926), Expect = 6e-099
Identities = 180/235 (76%), Positives = 211/235 (89%), Gaps = 2/235 (0%)
Frame = -3
Query: 874 SKLIIHCMSSVTDVPP-VSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYD 698
S+ ++ C+++ DVPP V+ETK NFLK+YKRPI SIY+TVLQEL+VQQHLMRYK TY+YD
Sbjct: 44 SRSVVRCVATAGDVPPTVAETKMNFLKSYKRPILSIYSTVLQELLVQQHLMRYKTTYQYD 103
Query: 697 PVFALGFVTVYDQLMDGYPSDQDRDSIFQAYVQALNEDPNQYRTDAQKMEEWARSQTFAS 518
VFALGFVTVYDQLM+GYPS++DRD+IF+AY+ ALNEDP QYR DAQKMEEWARSQ S
Sbjct: 104 AVFALGFVTVYDQLMEGYPSNEDRDAIFKAYITALNEDPEQYRADAQKMEEWARSQNGNS 163
Query: 517 LVDFSSKEGEVEAIFKDISERAGSKEGFSYSRFFAVGLFRLLELAGATDPTVLDKLCASL 338
LV+FSSK+GE+EAI KDISERA K FSYSRFFAVGLFRLLELA AT+PT+LDKLCA+L
Sbjct: 164 LVEFSSKDGEIEAILKDISERAQGKGSFSYSRFFAVGLFRLLELANATEPTILDKLCAAL 223
Query: 337 NINKKSVDRDLDVYRNLLSKLVQAKELLKEYVEREKKKRGERAAESQKANESISK 173
NINK+SVDRDLDVYRN+LSKLVQAKELLKEYVEREKKKR ER +E+ K+NE+++K
Sbjct: 224 NINKRSVDRDLDVYRNILSKLVQAKELLKEYVEREKKKREER-SETPKSNEAVTK 277
>sp|B8HQ62|THF1_CYAP4 Protein thf1 OS=Cyanothece sp. (strain PCC 7425 / ATCC
29141) GN=thf1 PE=3 SV=1
Length = 236
Score = 139 bits (350), Expect = 3e-032
Identities = 89/228 (39%), Positives = 129/228 (56%), Gaps = 13/228 (5%)
Frame = -3
Query: 826 VSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMDG 647
VS+TK F + RPI SIY V++EL+V+ HL+R +T+ YDPVFALG VT +++ M G
Sbjct: 7 VSDTKRAFYHNHARPINSIYRRVVEELLVEIHLLRVNQTFVYDPVFALGVVTTFERFMQG 66
Query: 646 YPSDQDRDSIFQAYVQALNEDPNQYRTDAQKMEEWARSQTFASLVDFSSKEGEVEAIFKD 467
Y D+ SIF A A DP Q + DAQ++ R Q+ SL+D+ S + +
Sbjct: 67 YHPPADQTSIFNAICLAQELDPQQVQQDAQELLGRVRGQSLESLLDWISTAASLGGDEQQ 126
Query: 466 ISERA-GSKEGFSYSRFFAVGLFRLLELA-------GATDPTVLDKLCASLNINKKSVDR 311
RA S F YSR FAVGLF LLE A A VL ++ +++ + + +
Sbjct: 127 NRLRAIASNPTFKYSRLFAVGLFTLLEQAEPELGKDEARLLQVLQQVGEVMHLPVEKMQK 186
Query: 310 DLDVYRNLLSKLVQAKELLKEYVEREKKKRGERAA-----ESQKANES 182
DL+ YR+ L K+ QA++ L++ V E+K+R + AA ES A E+
Sbjct: 187 DLEQYRSNLEKMTQARKTLEDIVAAERKRRQQNAAPDRSPESASATEA 234
>sp|Q31MY4|THF1_SYNE7 Protein thf1 OS=Synechococcus elongatus (strain PCC 7942)
GN=thf1 PE=3 SV=2
Length = 254
Score = 136 bits (340), Expect = 5e-031
Identities = 76/224 (33%), Positives = 120/224 (53%), Gaps = 10/224 (4%)
Frame = -3
Query: 844 VTDVPPVSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVY 665
+T VP VS++K F AY RPI +Y V++EL+V+ HL+ ++ YDP+FALG VT +
Sbjct: 1 MTSVPTVSDSKRAFYAAYPRPINPLYRRVVEELLVEIHLLSVNTSFVYDPLFALGVVTAF 60
Query: 664 DQLMDGYPSDQDRDSIFQAYVQALNEDPNQYRTDAQKMEEWAR---SQTFASLVDFSSKE 494
D M Y + +F A QA+ ++P QYR DA + E R S T + +
Sbjct: 61 DSFMSSYRPIEAVGPLFTALTQAVRQNPEQYRHDANAIAEQVRGVGSDTIRQWLTEAEAL 120
Query: 493 GEVEAIFKDISERAGSKEGFSYSRFFAVGLFRLLELAG---ATDP----TVLDKLCASLN 335
G + + + + F YSR FA+GLF LLE A DP T + + +
Sbjct: 121 GNAPELVRSSFQAIAGRSEFKYSRLFAIGLFSLLETAAPDLVQDPEALKTTVTAIAERFH 180
Query: 334 INKKSVDRDLDVYRNLLSKLVQAKELLKEYVEREKKKRGERAAE 203
+ + +DLD+YR+ L K+ QA+ ++E ++ +++KR +R E
Sbjct: 181 LPSDKLQKDLDLYRSNLEKMEQARITMEEAIQADRRKREQREQE 224
>sp|Q5N664|THF1_SYNP6 Protein thf1 OS=Synechococcus sp. (strain ATCC 27144 / PCC
6301 / SAUG 1402/1) GN=thf1 PE=3 SV=2
Length = 254
Score = 136 bits (340), Expect = 5e-031
Identities = 76/224 (33%), Positives = 120/224 (53%), Gaps = 10/224 (4%)
Frame = -3
Query: 844 VTDVPPVSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVY 665
+T VP VS++K F AY RPI +Y V++EL+V+ HL+ ++ YDP+FALG VT +
Sbjct: 1 MTSVPTVSDSKRAFYAAYPRPINPLYRRVVEELLVEIHLLSVNTSFVYDPLFALGVVTAF 60
Query: 664 DQLMDGYPSDQDRDSIFQAYVQALNEDPNQYRTDAQKMEEWAR---SQTFASLVDFSSKE 494
D M Y + +F A QA+ ++P QYR DA + E R S T + +
Sbjct: 61 DSFMSSYRPIEAVGPLFTALTQAVRQNPEQYRHDANAIAEQVRGVGSDTIRQWLTEAEAL 120
Query: 493 GEVEAIFKDISERAGSKEGFSYSRFFAVGLFRLLELAG---ATDP----TVLDKLCASLN 335
G + + + + F YSR FA+GLF LLE A DP T + + +
Sbjct: 121 GNAPELVRSSFQAIAGRSEFKYSRLFAIGLFSLLETAAPDLVQDPEALKTTVTAIAERFH 180
Query: 334 INKKSVDRDLDVYRNLLSKLVQAKELLKEYVEREKKKRGERAAE 203
+ + +DLD+YR+ L K+ QA+ ++E ++ +++KR +R E
Sbjct: 181 LPSDKLQKDLDLYRSNLEKMEQARITMEEAIQADRRKREQREQE 224
>sp|Q8DJT8|THF1_THEEB Protein thf1 OS=Thermosynechococcus elongatus (strain
BP-1) GN=thf1 PE=3 SV=1
Length = 222
Score = 133 bits (333), Expect = 3e-030
Identities = 79/211 (37%), Positives = 121/211 (57%), Gaps = 12/211 (5%)
Frame = -3
Query: 826 VSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMDG 647
VS+TK F A+ RPI SIY ++EL+V+ HL+R +RY P+FALG VT +DQ M+G
Sbjct: 7 VSDTKRAFYAAHTRPIHSIYRRFIEELLVEIHLLRVNVDFRYSPLFALGVVTAFDQFMEG 66
Query: 646 YPSDQDRDSIFQAYVQALNEDPNQYRTDAQKMEEWARSQTFASLVDFSSKEGEVEAIFKD 467
Y + DRD IF A A +P Q + DA +++ + + + ++D G+ A
Sbjct: 67 YQPEGDRDRIFHALCVAEEMNPQQLKEDAASWQQY-QGRPLSQILD-ELNSGQPSAPLNS 124
Query: 466 ISERAGSKEGFSYSRFFAVGLFRLL-ELAGATD---PTVLDKLCASLNINKKSVDRDLDV 299
++ YSR AVGL+ L ELAG LD+L + + + V RDL++
Sbjct: 125 LNHTG------KYSRLHAVGLYAFLQELAGEVTIHLNETLDQLAPVIPLPIEKVKRDLEL 178
Query: 298 YRNLLSKLVQAKELLKEYVEREKKKRGERAA 206
YR+ L K+ QA+ L+KE VE+E+K+R ++ +
Sbjct: 179 YRSNLDKINQARSLMKELVEQERKRRAQQTS 209
>sp|B7KI38|THF1_CYAP7 Protein thf1 OS=Cyanothece sp. (strain PCC 7424) GN=thf1
PE=3 SV=1
Length = 226
Score = 131 bits (327), Expect = 2e-029
Identities = 74/225 (32%), Positives = 129/225 (57%), Gaps = 24/225 (10%)
Frame = -3
Query: 835 VPPVSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQL 656
V VS++K +F + RPI S+Y V++EL+V+ HL+ ++YDPV+ALG VT + +
Sbjct: 4 VRTVSDSKRDFYTKHTRPINSVYRRVVEELMVEMHLLSVNSDFQYDPVYALGVVTSFQRF 63
Query: 655 MDGYPSDQDRDSIFQAYVQALNEDPNQYRTDAQKMEEWARSQTFASLV-------DFSSK 497
M GY D D++SIF A Q++ DP QYR DA++M E A+ + L+ D SS
Sbjct: 64 MQGYRPDADKESIFNALCQSVGGDPQQYRQDAERMIESAKQLSAQQLLFNLESASDSSSG 123
Query: 496 EGEVEAIFKDISERAGSKEGFSYSRFFAVGLFRLLELAGATDP----------TVLDKLC 347
E ++ I+ + + Y+R FA+G++ +L TDP V+ ++
Sbjct: 124 ENQILQTLIGIA----NAPKYKYTRLFAIGIYTIL---AETDPEMLKNTEKREEVVKQIA 176
Query: 346 ASLNINKKSVDRDLDVYRNLLSKLVQAKELLKEYVEREKKKRGER 212
L++ ++ + +DLD+YR+ L K+ Q +++E ++ ++KKR ++
Sbjct: 177 KVLHLPEEKMQKDLDLYRSNLEKMDQLLTVIEEALQADRKKREQQ 221
>sp|P73956|THF1_SYNY3 Protein thf1 OS=Synechocystis sp. (strain PCC 6803)
GN=thf1 PE=3 SV=1
Length = 240
Score = 122 bits (306), Expect = 4e-027
Identities = 76/243 (31%), Positives = 127/243 (52%), Gaps = 14/243 (5%)
Frame = -3
Query: 844 VTDVPPVSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVY 665
+T + VS+ K F Y RPI SIY ++EL+V+ HL+ + YDP+FALG VT +
Sbjct: 1 MTKIRTVSDAKRKFFTHYSRPISSIYRRFVEELLVEMHLLSVNIDFTYDPIFALGIVTSF 60
Query: 664 DQLMDGYPSDQDRDSIFQAYVQALNEDPNQYRTDAQKMEEWARSQTF-ASLVDFSSKEGE 488
+ M GY + +IF A ++++P+Q R DA+ + A A + +S++
Sbjct: 61 NSFMQGYQPAEQLPAIFNALCHGVDQNPDQVRQDAKNVAASAHHIGLDAWVTAAASEQAS 120
Query: 487 VEAIFKDISERAGSKEGFSYSRFFAVGLFRLLELAGATDPTVLD----------KLCASL 338
+ + + + F YSR FA+GL+ LL DP V D +L L
Sbjct: 121 GDNLLLNTLTGIHQRHKFKYSRLFAIGLYTLL---ADQDPEVKDNDEKRQDYLTRLSELL 177
Query: 337 NINKKSVDRDLDVYRNLLSKLVQAKELLKEYVEREKKKRGERAAESQKANESISKSLGDN 158
+++ V +DLD+YR+ L K+ Q ++L++ E E+KK+ ++AA + A E + ++
Sbjct: 178 DLSLDKVVKDLDLYRSNLEKVDQLLKVLEDAAEAERKKKEKQAASTTPAIEEAPVTTAES 237
Query: 157 SLS 149
S S
Sbjct: 238 SES 240
>sp|B0C3M8|THF1_ACAM1 Protein thf1 OS=Acaryochloris marina (strain MBIC 11017)
GN=thf1 PE=3 SV=1
Length = 247
Score = 121 bits (301), Expect = 2e-026
Identities = 61/153 (39%), Positives = 97/153 (63%), Gaps = 9/153 (5%)
Frame = -3
Query: 826 VSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMDG 647
VS+TK F + RP+ S+Y V++EL+V+ HL+R + +RYDP+FALG T +D+ MDG
Sbjct: 7 VSDTKRAFYSIHTRPVNSVYRRVVEELMVEMHLLRVNEDFRYDPIFALGVTTSFDRFMDG 66
Query: 646 YPSDQDRDSIFQAYVQALNEDPNQYRTDAQKMEEWARSQTFASLVDF-----SSKEGEVE 482
Y + D+D+IF A +A DP Q + D Q++ E A+S++ ++D+ +S E++
Sbjct: 67 YQPENDKDAIFSAICKAQEADPVQMKKDGQRLTELAQSKSAQEMLDWITQAANSGGDELQ 126
Query: 481 AIFKDISERAGSKEGFSYSRFFAVGLFRLLELA 383
++I++ F YSR FA+GLF LLEL+
Sbjct: 127 WQLRNIAQ----NPKFKYSRLFAIGLFTLLELS 155
>sp|Q116P5|THF1_TRIEI Protein thf1 OS=Trichodesmium erythraeum (strain IMS101)
GN=thf1 PE=3 SV=1
Length = 239
Score = 119 bits (298), Expect = 4e-026
Identities = 61/149 (40%), Positives = 89/149 (59%), Gaps = 2/149 (1%)
Frame = -3
Query: 826 VSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMDG 647
VS+TK F + RPI SIYN V++EL+V+ HL+ Y Y+P +ALG VT +D+ M G
Sbjct: 7 VSDTKKTFYHFHTRPINSIYNRVIEELLVEMHLISVNVDYSYNPFYALGVVTAFDRFMQG 66
Query: 646 YPSDQDRDSIFQAYVQALNEDPNQYRTDAQKMEEWARSQTFASLVDF--SSKEGEVEAIF 473
Y +D+ SIF A +Q EDPN+YR+DA+ +E+ A + + ++ + SK +
Sbjct: 67 YSPQEDKTSIFNALIQGQEEDPNKYRSDAKGLEDLAGKISASDILSWICLSKNIDNTQYL 126
Query: 472 KDISERAGSKEGFSYSRFFAVGLFRLLEL 386
+D F YSR FA+GLF LLE+
Sbjct: 127 QDDLRAISENSKFRYSRLFAIGLFTLLEI 155
>sp|B1XHY6|THF1_SYNP2 Protein thf1 OS=Synechococcus sp. (strain ATCC 27264 / PCC
7002 / PR-6) GN=thf1 PE=3 SV=1
Length = 254
Score = 107 bits (265), Expect = 2e-022
Identities = 57/165 (34%), Positives = 96/165 (58%), Gaps = 5/165 (3%)
Frame = -3
Query: 844 VTDVPPVSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVY 665
++ V VS+TK +F + RPI SI+ V++EL+V+ HL+ +RYDP +ALG VT +
Sbjct: 1 MSQVRTVSDTKRDFYTHHTRPINSIFRRVVEELLVEMHLLSVNADFRYDPFYALGVVTSF 60
Query: 664 DQLMDGYPSDQDRDSIFQAYVQALNEDPNQYRTDAQKMEEWARSQTFASLVDFSSKEGEV 485
++ M GY + D+ SIFQ+ QA+ D N+Y+ DA + E A+ + L++ ++
Sbjct: 61 ERFMQGYRPEADKVSIFQSMCQAIGGDANRYKEDAMALVELAKRCSGTQLIECFRQDVPP 120
Query: 484 EAIFK--DISERAGSKEGFSYSRFFAVGLFRLLELAGATDPTVLD 356
E + + E + F YSR FA+G++ L G ++P +L+
Sbjct: 121 EGAQELWEKIEAIAKNDHFKYSRLFAIGVYTFL---GESEPQLLE 162
>sp|B7K277|THF1_CYAP8 Protein thf1 OS=Cyanothece sp. (strain PCC 8801) GN=thf1
PE=3 SV=1
Length = 235
Score = 103 bits (256), Expect = 3e-021
Identities = 53/148 (35%), Positives = 86/148 (58%), Gaps = 3/148 (2%)
Frame = -3
Query: 826 VSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMDG 647
VS+TK +F + RPI SIY ++EL+V+ HL+ +RYDP++ALG V + Q M G
Sbjct: 7 VSDTKRDFYNHHTRPINSIYRRFIEELLVEMHLLCVNIDFRYDPIYALGVVASFQQFMQG 66
Query: 646 YPSDQDRDSIFQAYVQALNEDPNQYRTDAQKMEEWARSQTFASLVDF--SSKEGEV-EAI 476
Y ++D++SIF A QA+ D +YR +AQ + + + + L+ S++ GE E +
Sbjct: 67 YRPEEDKNSIFSALCQAVGGDGEKYRHEAQTLLNQVKGMSVSDLIAMGNSARTGEPGEGM 126
Query: 475 FKDISERAGSKEGFSYSRFFAVGLFRLL 392
+ + F YSR FA+GL+ ++
Sbjct: 127 LYNTLQAIAKNPQFKYSRLFAIGLYTMV 154
>sp|P0C1D1|THF1_SYNJB Protein thf1 OS=Synechococcus sp. GN=thf1 PE=3 SV=1
Length = 239
Score = 97 bits (241), Expect = 1e-019
Identities = 58/152 (38%), Positives = 86/152 (56%), Gaps = 3/152 (1%)
Frame = -3
Query: 835 VPPVSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQL 656
V +S TK+ F AY RPI ++Y V++EL+V+ HL T+ YDP FALG VT+YD L
Sbjct: 4 VRTLSATKAAFFSAYPRPINAVYRRVVEELLVELHLTTVNSTFVYDPFFALGLVTLYDGL 63
Query: 655 MDGYPSDQDRDSIFQAYVQALNEDPNQYRTDAQKMEEWARSQTFASLVDFSSKEGEVEAI 476
M+ Y + R++IF A +AL+ P R +A+ + E S +D + E E +
Sbjct: 64 MEAYHPPEQREAIFNALCKALHLKPEVLRKNARDLLELMGSGDPRQRLDLLCLKPEAEDV 123
Query: 475 --FKDISERAGSKEGFSYSRFFAVGLFRLLEL 386
K I ER ++ ++YSR AVGL+ E+
Sbjct: 124 GGLKAILERM-TQPPYAYSRVLAVGLYTAYEV 154
>sp|Q2JSQ3|THF1_SYNJA Protein thf1 OS=Synechococcus sp. (strain JA-3-3Ab)
GN=thf1 PE=3 SV=1
Length = 239
Score = 94 bits (231), Expect = 2e-018
Identities = 56/151 (37%), Positives = 83/151 (54%), Gaps = 3/151 (1%)
Frame = -3
Query: 835 VPPVSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQL 656
V +S TK+ F AY RPI + Y V++EL+V+ HL + YDP FALG VT+YD L
Sbjct: 4 VRTLSATKAAFFSAYPRPINAAYRRVVEELLVELHLTTVNSAFVYDPFFALGLVTLYDSL 63
Query: 655 MDGYPSDQDRDSIFQAYVQALNEDPNQYRTDAQKMEEWARSQTFASLVDFSSKEGEVEAI 476
M+ Y + R++IF A +AL+ P R +A+ + E RS + + E E +
Sbjct: 64 MEAYHPPEQREAIFNALCKALHLKPEVLRKNARDLLELMRSGDPVQRYNLLCLKPEAEDV 123
Query: 475 --FKDISERAGSKEGFSYSRFFAVGLFRLLE 389
K I +R ++ ++YSR AVGL+ E
Sbjct: 124 GGLKAILQRM-TQPPYAYSRVLAVGLYTAYE 153
>sp|A9BAB2|THF1_PROM4 Protein thf1 OS=Prochlorococcus marinus (strain MIT 9211)
GN=thf1 PE=3 SV=1
Length = 221
Score = 88 bits (216), Expect = 1e-016
Identities = 54/220 (24%), Positives = 121/220 (55%), Gaps = 18/220 (8%)
Frame = -3
Query: 826 VSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMDG 647
VSE+K+ F K + +P++Y ++ ELIV+ +L++ ++ + D VFA+G +++ G
Sbjct: 7 VSESKAIFHKEFPFVVPAVYRRLVDELIVELNLLKNQERFVADGVFAIGLTSIFLDFTKG 66
Query: 646 YPSDQDRDSIFQAYVQALN---EDPNQYRTDAQKMEEWARSQTFASLVDFSSKEGEVEAI 476
Y + + + +A + + Q +A+K+ + SL+ ++++ E E+
Sbjct: 67 YKPENQKGILLEAICKCTGFSASNLEQIALEAKKLANGLNTNEIKSLITDNNRD-EKEST 125
Query: 475 FKDISERAGSKEGFSYSRFFAVGLFRLLELAG-------ATDPTVLDKLCASLNINKKSV 317
+K I++ YSR A+G+++L+++ AT+ + LD L + K+ V
Sbjct: 126 YKLINKNN------HYSRIIAIGIYKLVDMQSNGFNKEEATENSYLD-LVNNFGYTKERV 178
Query: 316 DRDLDVYRNLLSKLVQAKELLKEYVEREKKKRGERAAESQ 197
++D+++Y++ L K+ +A EL++ ++ EK++ ER + ++
Sbjct: 179 EKDVNLYKSSLDKIEKALELIEMNIKDEKRRNKERVSRTK 218
>sp|Q7V1W1|THF1_PROMP Protein thf1 OS=Prochlorococcus marinus subsp. pastoris
(strain CCMP1986 / MED4) GN=thf1 PE=3 SV=2
Length = 202
Score = 70 bits (171), Expect = 2e-011
Identities = 44/209 (21%), Positives = 102/209 (48%), Gaps = 26/209 (12%)
Frame = -3
Query: 820 ETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMDGYP 641
++K F + + IP +Y ++ E++V+ +L+ ++ + D +F +G + +L GY
Sbjct: 9 DSKKLFHEQFPYVIPGLYKRIVDEMLVELNLLNHQNEFIQDDLFCVGLTETFKELTKGYK 68
Query: 640 SDQDRDSIFQAYVQALNEDPNQYRTDAQKMEEWARSQTFASLVDFSSKEGEVEAIFKDIS 461
++ +F++ + N +P + + ++K E + ++ E+ + K S
Sbjct: 69 PEEHLRVLFESLCNSSNFEPKKIKEASKKTLEVYKDKSLK----------EISILLKQKS 118
Query: 460 ERAGSKEGFSYSRFFAVGLFRLLELAGATD---------PTVLDKLCASLNINKKSVDRD 308
+ SR +G++ L +A ATD ++ + LN++ ++D
Sbjct: 119 D-----SNLYSSRILNLGIY--LIIANATDFKDIKDPEKNKIISDIINKLNLSFNKAEKD 171
Query: 307 LDVYRNLLSKLVQAKELLKEYVEREKKKR 221
+ +Y++ + K+ QAKELL+E ++KK++
Sbjct: 172 IGIYKSSILKMEQAKELLQEAKIKDKKEK 200
>sp|Q7NKS7|THF1_GLOVI Protein thf1 OS=Gloeobacter violaceus GN=thf1 PE=3 SV=1
Length = 228
Score = 57 bits (135), Expect = 3e-007
Identities = 33/103 (32%), Positives = 59/103 (57%), Gaps = 8/103 (7%)
Frame = -3
Query: 496 EGEVEAIFKDISERAGSKEGFSYSRFFAVGLFRLLELAGATDPTV-------LDKLCASL 338
+G ++A+ ++ A + E F YSR F++GL +LE AG L ++C L
Sbjct: 122 DGRLKAMGDTLAGIANA-ERFKYSRLFSLGLANILEQAGRAAAMSEKDRLERLQQICTYL 180
Query: 337 NINKKSVDRDLDVYRNLLSKLVQAKELLKEYVEREKKKRGERA 209
++ V RDLD + ++L ++ ++KE++ E + E++KR ERA
Sbjct: 181 KLDYNRVKRDLDFFHSVLERIKRSKEVVDELSQTERRKREERA 223
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,099,029,888
Number of Sequences: 518415
Number of Extensions: 26099029888
Number of Successful Extensions: 175876120
Number of sequences better than 0.0: 0
|
