BLASTX 7.6.2
Query= UN06627 /QuerySize=860
(859 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297852632|ref|XP_002894197.1| hypothetical protein ARALYDRAFT... 274 1e-071
gi|15222783|ref|NP_175383.1| RNA-binding protein 47A [Arabidopsi... 267 3e-069
gi|10120421|gb|AAG13046.1|AC011807_5 Putative RNA binding protei... 267 3e-069
gi|9294614|dbj|BAB02953.1| DNA/RNA binding protein-like [Arabido... 255 8e-066
gi|15230291|ref|NP_188544.1| RNA-binding protein 47B [Arabidopsi... 255 8e-066
gi|297834824|ref|XP_002885294.1| RNA-binding protein 47B [Arabid... 250 2e-064
gi|21618243|gb|AAM67293.1| nuclear acid binding protein, putativ... 220 4e-055
gi|224105517|ref|XP_002313840.1| predicted protein [Populus tric... 210 3e-052
gi|255555523|ref|XP_002518798.1| nuclear acid binding protein, p... 196 3e-048
gi|255538402|ref|XP_002510266.1| nuclear acid binding protein, p... 192 6e-047
gi|224123466|ref|XP_002330321.1| predicted protein [Populus tric... 191 1e-046
gi|2708532|gb|AAB92518.1| putative RNA binding protein [Nicotian... 188 9e-046
gi|224137382|ref|XP_002327112.1| predicted protein [Populus tric... 186 4e-045
gi|224067280|ref|XP_002302445.1| predicted protein [Populus tric... 186 4e-045
gi|82621116|gb|ABB86246.1| DNA-binding protein-like [Solanum tub... 184 2e-044
gi|9663769|emb|CAC01238.1| RNA Binding Protein 47 [Nicotiana plu... 183 4e-044
gi|1899188|gb|AAC49850.1| DNA binding protein ACBF [Nicotiana ta... 179 4e-043
gi|225444438|ref|XP_002266857.1| PREDICTED: hypothetical protein... 177 3e-042
gi|15594035|emb|CAC69852.1| nucleic acid binding protein [Nicoti... 176 5e-042
gi|225458533|ref|XP_002284337.1| PREDICTED: hypothetical protein... 175 8e-042
>gi|297852632|ref|XP_002894197.1| hypothetical protein ARALYDRAFT_474095
[Arabidopsis lyrata subsp. lyrata]
Length = 450
Score = 274 bits (700), Expect = 1e-071
Identities = 141/187 (75%), Positives = 154/187 (82%), Gaps = 11/187 (5%)
Frame = +1
Query: 274 QQQQQWQ-QHQQWMAAMAMMQQQQQMMMYPPHHQYAPYNQAA--AYPQFQYAPPY----- 429
QQQQQW QQ+ AA M QQQQMMMY PHHQYAPYNQAA +PQFQYA Y
Sbjct: 45 QQQQQWMAAMQQYPAAAMAMMQQQQMMMY-PHHQYAPYNQAAYQQHPQFQYAAAYQQQQQ 103
Query: 430 -HQQQQQKQRGGSGAGGDDVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTCQ 606
HQ QQQKQ+ G+GGDDVKTLW+GDLLHWMDETYLHTCFSHTN+VSSVKVIRNKQTCQ
Sbjct: 104 HHQSQQQKQQPRGGSGGDDVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQ 163
Query: 607 SEGYGFVEFLSRSAAEEVLQSYSGVTMPNAEQPFRLNWASFSTGEKRAPKHG-QIYLYS* 783
SEGYGFVEFLSRSAAEE LQS+SGVTMPNAEQPFRLNWASFSTGEKRA ++G + ++
Sbjct: 164 SEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVG 223
Query: 784 RLAPDVT 804
LAPDV+
Sbjct: 224 DLAPDVS 230
>gi|15222783|ref|NP_175383.1| RNA-binding protein 47A [Arabidopsis thaliana]
Length = 445
Score = 267 bits (680), Expect = 3e-069
Identities = 142/203 (69%), Positives = 157/203 (77%), Gaps = 10/203 (4%)
Frame = +1
Query: 220 PDSSSATPAGTTPPPPSQQQQQQWQ-QHQQWMAAMAMMQQQQQMMMYPPHHQYAPYNQAA 396
P +TP QQQQQW QQ+ AA M QQQQMMMY PH QYAPYNQAA
Sbjct: 25 PPLQQSTPPPQQQQQQQWQQQQQWMAAMQQYPAAAMAMMQQQQMMMY-PHPQYAPYNQAA 83
Query: 397 --AYPQFQYAPPYHQQQQQ----KQRGGSGAGGDDVKTLWIGDLLHWMDETYLHTCFSHT 558
+PQFQYA Y QQQQQ +Q+ G+GGDDVKTLW+GDLLHWMDETYLHTCFSHT
Sbjct: 84 YQQHPQFQYA-AYQQQQQQHHQSQQQPRGGSGGDDVKTLWVGDLLHWMDETYLHTCFSHT 142
Query: 559 NQVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEVLQSYSGVTMPNAEQPFRLNWASFSTG 738
N+VSSVKVIRNKQTCQSEGYGFVEFLSRSAAEE LQS+SGVTMPNAEQPFRLNWASFSTG
Sbjct: 143 NEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTG 202
Query: 739 EKRAPKHG-QIYLYS*RLAPDVT 804
EKRA ++G + ++ LAPDV+
Sbjct: 203 EKRASENGPDLSIFVGDLAPDVS 225
>gi|10120421|gb|AAG13046.1|AC011807_5 Putative RNA binding protein [Arabidopsis
thaliana]
Length = 468
Score = 267 bits (680), Expect = 3e-069
Identities = 142/203 (69%), Positives = 157/203 (77%), Gaps = 10/203 (4%)
Frame = +1
Query: 220 PDSSSATPAGTTPPPPSQQQQQQWQ-QHQQWMAAMAMMQQQQQMMMYPPHHQYAPYNQAA 396
P +TP QQQQQW QQ+ AA M QQQQMMMY PH QYAPYNQAA
Sbjct: 25 PPLQQSTPPPQQQQQQQWQQQQQWMAAMQQYPAAAMAMMQQQQMMMY-PHPQYAPYNQAA 83
Query: 397 --AYPQFQYAPPYHQQQQQ----KQRGGSGAGGDDVKTLWIGDLLHWMDETYLHTCFSHT 558
+PQFQYA Y QQQQQ +Q+ G+GGDDVKTLW+GDLLHWMDETYLHTCFSHT
Sbjct: 84 YQQHPQFQYA-AYQQQQQQHHQSQQQPRGGSGGDDVKTLWVGDLLHWMDETYLHTCFSHT 142
Query: 559 NQVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEVLQSYSGVTMPNAEQPFRLNWASFSTG 738
N+VSSVKVIRNKQTCQSEGYGFVEFLSRSAAEE LQS+SGVTMPNAEQPFRLNWASFSTG
Sbjct: 143 NEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTG 202
Query: 739 EKRAPKHG-QIYLYS*RLAPDVT 804
EKRA ++G + ++ LAPDV+
Sbjct: 203 EKRASENGPDLSIFVGDLAPDVS 225
>gi|9294614|dbj|BAB02953.1| DNA/RNA binding protein-like [Arabidopsis thaliana]
Length = 489
Score = 255 bits (650), Expect = 8e-066
Identities = 136/217 (62%), Positives = 155/217 (71%), Gaps = 18/217 (8%)
Frame = +1
Query: 199 MQTANNGPDSSSATPAGTTP----PPPSQQQQQQWQQHQQWMAAM-------AMMQQQQQ 345
MQT NG DS+ AT T P PPP QQ QQQ QQ QQWMAAM MM QQQQ
Sbjct: 1 MQT-TNGSDSTLATSGATPPNQQTPPPPQQWQQQQQQQQQWMAAMQYPPAAAMMMMQQQQ 59
Query: 346 MMMYPPHHQYAPYNQA---AAYPQFQYAPPYHQQQQQKQRGGSGAGGDDVKTLWIGDLLH 516
M+MYP HQY PYNQ +PQ Y Q Q Q+ + GDDVKTLW+GDLLH
Sbjct: 60 MLMYP--HQYVPYNQGPYQQHHPQLHQYGSYQQHQHQQHKAIDRGSGDDVKTLWVGDLLH 117
Query: 517 WMDETYLHTCFSHTNQVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEVLQSYSGVTMPNA 696
WMDETYLH+CFSHT +VSSVKVIRNK T QSEGYGFVEFLSR+AAEEVLQ+YSG MPN+
Sbjct: 118 WMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNS 177
Query: 697 EQPFRLNWASFSTGEKRAPKHG-QIYLYS*RLAPDVT 804
+QPFR+NWASFSTGEKRA ++G + ++ L+PDVT
Sbjct: 178 DQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVT 214
>gi|15230291|ref|NP_188544.1| RNA-binding protein 47B [Arabidopsis thaliana]
Length = 435
Score = 255 bits (650), Expect = 8e-066
Identities = 136/217 (62%), Positives = 155/217 (71%), Gaps = 18/217 (8%)
Frame = +1
Query: 199 MQTANNGPDSSSATPAGTTP----PPPSQQQQQQWQQHQQWMAAM-------AMMQQQQQ 345
MQT NG DS+ AT T P PPP QQ QQQ QQ QQWMAAM MM QQQQ
Sbjct: 1 MQT-TNGSDSTLATSGATPPNQQTPPPPQQWQQQQQQQQQWMAAMQYPPAAAMMMMQQQQ 59
Query: 346 MMMYPPHHQYAPYNQA---AAYPQFQYAPPYHQQQQQKQRGGSGAGGDDVKTLWIGDLLH 516
M+MYP HQY PYNQ +PQ Y Q Q Q+ + GDDVKTLW+GDLLH
Sbjct: 60 MLMYP--HQYVPYNQGPYQQHHPQLHQYGSYQQHQHQQHKAIDRGSGDDVKTLWVGDLLH 117
Query: 517 WMDETYLHTCFSHTNQVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEVLQSYSGVTMPNA 696
WMDETYLH+CFSHT +VSSVKVIRNK T QSEGYGFVEFLSR+AAEEVLQ+YSG MPN+
Sbjct: 118 WMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNS 177
Query: 697 EQPFRLNWASFSTGEKRAPKHG-QIYLYS*RLAPDVT 804
+QPFR+NWASFSTGEKRA ++G + ++ L+PDVT
Sbjct: 178 DQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVT 214
>gi|297834824|ref|XP_002885294.1| RNA-binding protein 47B [Arabidopsis lyrata
subsp. lyrata]
Length = 435
Score = 250 bits (638), Expect = 2e-064
Identities = 137/218 (62%), Positives = 156/218 (71%), Gaps = 20/218 (9%)
Frame = +1
Query: 199 MQTANNGPDSSSATPAGT-----TPPPPSQQQQQQWQQHQQWM-------AAMAMMQQQQ 342
MQT NG DS+ AT T TPPPP Q QQQ QQ QQWM AA MM QQQ
Sbjct: 1 MQT-TNGSDSTLATSGATPPNQQTPPPPHQWQQQPPQQQQQWMAAAMQYPAAAMMMMQQQ 59
Query: 343 QMMMYPPHHQYAPYNQAA---AYPQFQYAPPYHQQQQQKQRGGSGAGGDDVKTLWIGDLL 513
QMMMYP HQY PYNQ +PQ Y Q QQQ + G+ GDDVKTLW+GDLL
Sbjct: 60 QMMMYP--HQYVPYNQGPYQHHHPQLHQYGSYQQHQQQHKPLDRGS-GDDVKTLWVGDLL 116
Query: 514 HWMDETYLHTCFSHTNQVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEVLQSYSGVTMPN 693
HWMDETYLH+CFSHT +VSSVKVIRNK T QSEGYGF+EFLSR+AAEEVLQ+YSG MPN
Sbjct: 117 HWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFIEFLSRAAAEEVLQNYSGSLMPN 176
Query: 694 AEQPFRLNWASFSTGEKRAPKHG-QIYLYS*RLAPDVT 804
++QPFR+NWASFSTGEKRA ++G + ++ L+PDVT
Sbjct: 177 SDQPFRINWASFSTGEKRAVENGPDLSIFVGDLSPDVT 214
>gi|21618243|gb|AAM67293.1| nuclear acid binding protein, putative [Arabidopsis
thaliana]
Length = 392
Score = 220 bits (558), Expect = 4e-055
Identities = 110/168 (65%), Positives = 128/168 (76%), Gaps = 6/168 (3%)
Frame = +1
Query: 313 AAMAMMQQQQQMMMYPPHHQYAPYNQA---AAYPQFQYAPPYHQQQQQKQRGGSGAGGDD 483
AA MM QQQQM+MYP HQY PYNQ +PQ Y Q Q Q+ + GDD
Sbjct: 6 AAAMMMMQQQQMLMYP--HQYVPYNQGPYQQHHPQLHQYGSYQQHQHQQHKAIDRGSGDD 63
Query: 484 VKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEVL 663
VKTLW+GDLLHWMDETYLH+CFSHT +VSSVKVIRNK T QSEGYGFVEFLSR+AAEEVL
Sbjct: 64 VKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVL 123
Query: 664 QSYSGVTMPNAEQPFRLNWASFSTGEKRAPKHG-QIYLYS*RLAPDVT 804
Q+YSG MPN++QPFR+NWASFSTGEKRA ++G + ++ L+PDVT
Sbjct: 124 QNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVT 171
>gi|224105517|ref|XP_002313840.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 210 bits (533), Expect = 3e-052
Identities = 112/186 (60%), Positives = 132/186 (70%), Gaps = 12/186 (6%)
Frame = +1
Query: 271 QQQQQQWQQHQQWMAAM-----AMMQQQQQMMMYPP---HHQYAPYNQAAAYPQFQYAPP 426
QQQQQQ QQ QQWMAAM AM+ QQQMMMYP HH A Y+Q Q Q
Sbjct: 3 QQQQQQQQQQQQWMAAMQYPAAAMVMMQQQMMMYPQQQHHHYMAYYHQQQQQYQKQQQQY 62
Query: 427 YHQQQQQKQRGGSGAGGDDVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTCQ 606
+ +QQ+Q Q+ GS ++ KT+W+GDLLHWMDETYLH CFSHT +VSSVK+IRNKQT Q
Sbjct: 63 HQKQQKQLQQQGS---NEEAKTVWVGDLLHWMDETYLHNCFSHTGEVSSVKIIRNKQTGQ 119
Query: 607 SEGYGFVEFLSRSAAEEVLQSYSGVTMPNAEQPFRLNWASFSTGEKRAPKHGQIYLYS*R 786
EGYGFVEF S +AAE+VLQSYSG MPN +QPFRLNWASF+ GE+RA + ++
Sbjct: 120 LEGYGFVEFYSHAAAEKVLQSYSGSMMPNTDQPFRLNWASFA-GERRADAGSDLSIFVGD 178
Query: 787 LAPDVT 804
LA DVT
Sbjct: 179 LAADVT 184
>gi|255555523|ref|XP_002518798.1| nuclear acid binding protein, putative
[Ricinus communis]
Length = 438
Score = 196 bits (498), Expect = 3e-048
Identities = 102/183 (55%), Positives = 126/183 (68%), Gaps = 7/183 (3%)
Frame = +1
Query: 259 PPPSQQQQQQWQQHQQWMAAMAMMQQQQQMMMYP-PHHQYAPYNQAAAYPQFQYAPPYHQ 435
P QQQQQQW Q+ AA AM+ QQ MMMYP HH Y Y Q Q QY ++Q
Sbjct: 34 PHMQQQQQQQWMAAMQYPAA-AMVMMQQHMMMYPQQHHPYMGYYQ----QQQQYHKQHYQ 88
Query: 436 QQQQKQRGGSGAGGDDVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTCQSEG 615
+Q + Q+ +D KT+W+GDLLHWMDETYLH+CFSHT +V+SVKVIRNKQT Q EG
Sbjct: 89 KQHKPQQQQQHVPTEDSKTIWVGDLLHWMDETYLHSCFSHTGEVTSVKVIRNKQTGQPEG 148
Query: 616 YGFVEFLSRSAAEEVLQSYSGVTMPNAEQPFRLNWASFSTGEKRAPKHGQIYLYS*RLAP 795
YGF+EF S + AE+VLQ+Y+G MPNA+QPFRLNWASF+ GE+R + ++ LA
Sbjct: 149 YGFIEFYSHATAEKVLQNYNGSMMPNADQPFRLNWASFA-GERRTETGSDLSIFVGDLAA 207
Query: 796 DVT 804
DVT
Sbjct: 208 DVT 210
>gi|255538402|ref|XP_002510266.1| nuclear acid binding protein, putative
[Ricinus communis]
Length = 443
Score = 192 bits (487), Expect = 6e-047
Identities = 103/192 (53%), Positives = 126/192 (65%), Gaps = 15/192 (7%)
Frame = +1
Query: 256 PPP---PSQQQQQQWQQHQQWMAAMAMMQQQQQMMMYPPHHQYA---PYNQAAAYPQFQY 417
PPP P QQQQQW Q AAM M Q M PP H YA P + AY Q+ +
Sbjct: 29 PPPAPQPQSQQQQQWMAMQYPAAAMVMQHQ-----MLPPQH-YAPPPPQHYMTAYHQYHH 82
Query: 418 APPY-HQQQQQKQRGGS--GAGGDDVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIR 588
P+ HQ QQ Q GS G GG + +T+WIGDL HWMDE YLHTCF+ T ++ S+KVIR
Sbjct: 83 HHPHPHQPQQHHQNQGSSGGGGGGENRTVWIGDLHHWMDENYLHTCFASTGEIVSIKVIR 142
Query: 589 NKQTCQSEGYGFVEFLSRSAAEEVLQSYSGVTMPNAEQPFRLNWASFSTGEKRAPKHGQI 768
NKQT SEGYGFVEF + + AE+VLQ+Y+G+ MPN EQPFRLNWA+FSTG+KR+ +
Sbjct: 143 NKQTGLSEGYGFVEFYTHATAEKVLQNYAGILMPNTEQPFRLNWATFSTGDKRSDNAPDL 202
Query: 769 YLYS*RLAPDVT 804
++ LA DVT
Sbjct: 203 SIFVGDLAADVT 214
>gi|224123466|ref|XP_002330321.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 191 bits (485), Expect = 1e-046
Identities = 101/168 (60%), Positives = 118/168 (70%), Gaps = 8/168 (4%)
Frame = +1
Query: 313 AAMAMMQQQQQMMMYPPHHQYAPYNQAAAYPQFQY---APPYHQ-QQQQKQRGGSGAGGD 480
AAMAMMQQQ M + HH Y Y Q + QY YHQ QQ+Q Q+ GS +
Sbjct: 6 AAMAMMQQQMMMYPHQQHHHYMAYYQQQQHQHQQYQNKQQQYHQKQQKQLQQQGS---NE 62
Query: 481 DVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEV 660
+ KT+W+GDLLHWMDE YLH CFSHT +VSSVK+IRNKQT Q EGYGFVEF SR+AAE+V
Sbjct: 63 EAKTIWVGDLLHWMDEAYLHNCFSHTGEVSSVKIIRNKQTGQLEGYGFVEFYSRAAAEKV 122
Query: 661 LQSYSGVTMPNAEQPFRLNWASFSTGEKRAPKHGQIYLYS*RLAPDVT 804
LQSYSG MPN EQPFRLNWASF+ GE+RA + ++ LA DVT
Sbjct: 123 LQSYSGSMMPNTEQPFRLNWASFA-GERRADPGSDLSIFVGDLAADVT 169
>gi|2708532|gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]
Length = 482
Score = 188 bits (477), Expect = 9e-046
Identities = 106/183 (57%), Positives = 120/183 (65%), Gaps = 9/183 (4%)
Frame = +1
Query: 271 QQQQQQWQQHQQWMAAMAMMQQQQQMMMYPPHHQYAPYNQAAAYPQFQYAPPY--HQQQQ 444
QQQQQQ QQ QQWM AM QQQ M YP Q Y Q QY P Y HQQQQ
Sbjct: 65 QQQQQQQQQQQQWM-AMQQYQQQWMAMQYPA--AAMAMQQQMMYGQ-QYMPYYQQHQQQQ 120
Query: 445 QKQRGGS---GAGGDDVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTCQSEG 615
QK + + +D KT+WIGDL WMDE+YLH+CFS +V SVK+IRNKQT QSE
Sbjct: 121 QKMQQSPTQIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSER 180
Query: 616 YGFVEFLSRSAAEEVLQSYSGVTMPNAEQPFRLNWASFSTGEKRAPKHGQIYLYS*RLAP 795
YGFVEF + +AAE+VLQSY+G MPNAEQPFRLNWA FSTGEKRA ++ LA
Sbjct: 181 YGFVEFNTHAAAEKVLQSYNGTMMPNAEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLAS 240
Query: 796 DVT 804
DVT
Sbjct: 241 DVT 243
>gi|224137382|ref|XP_002327112.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 186 bits (472), Expect = 4e-045
Identities = 102/205 (49%), Positives = 128/205 (62%), Gaps = 16/205 (7%)
Frame = +1
Query: 211 NNGPDSSSATPAGTTPPPPSQQQQQQWQQHQQWMAAMAMMQQQQQMMMYPPHHQYAPYNQ 390
++G DS + PP QQQQW Q AAM M Q + PP H P Q
Sbjct: 3 SSGSDSQTQQEQNQRQQPPPPPQQQQWMPIQYPAAAMVM-----QHHIIPPQHYGPPPPQ 57
Query: 391 ---AAAYPQFQ----YAPPYHQQQQQKQRGGSGAGGDDVKTLWIGDLLHWMDETYLHTCF 549
AAAY Q+Q + P Q Q++QR GSG + KT+WIGDL HWMDE YLH+CF
Sbjct: 58 HYLAAAYHQYQPHHHHLPHVQQHTQKQQREGSG----ENKTIWIGDLHHWMDENYLHSCF 113
Query: 550 SHTNQVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEVLQSYSGVTMPNAEQPFRLNWASF 729
T +++S+KVIRNKQT SEGYGFVEFL+ + AE+VLQ+Y G+ MPN EQPFRLNWA+F
Sbjct: 114 VSTGEIASIKVIRNKQTGLSEGYGFVEFLTHATAEKVLQNYGGILMPNTEQPFRLNWATF 173
Query: 730 STGEKRAPKHGQIYLYS*RLAPDVT 804
STG+KR+ + ++ LA DVT
Sbjct: 174 STGDKRSDNAPDLSIFVGDLAADVT 198
>gi|224067280|ref|XP_002302445.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 186 bits (472), Expect = 4e-045
Identities = 100/188 (53%), Positives = 123/188 (65%), Gaps = 10/188 (5%)
Frame = +1
Query: 247 GTTPPPPSQQQQQQWQQHQQWMAAMAMMQQQQQMMMYPPHHQYAPYNQAAAYPQFQYAP- 423
G PPPP QQQQW Q +AAM M Q PP Y A AY Q+Q+
Sbjct: 22 GQQPPPP--PQQQQWMPMQYPVAAMVMQHMPPQHYGLPPPQHYM---AATAYHQYQHHHH 76
Query: 424 -PYHQQQQQKQRGGSGAGGDDVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQT 600
P+ QQQQQ+QR GS D KT+ IGDL HWMDE YLHTCF+ T +++S+KVIR+KQT
Sbjct: 77 LPHVQQQQQQQREGSSG---DNKTICIGDLHHWMDENYLHTCFASTGEIASIKVIRSKQT 133
Query: 601 CQSEGYGFVEFLSRSAAEEVLQSYSGVTMPNAEQPFRLNWASFSTGEKRAPKHGQIYLYS 780
SEGYGFVEF + + AE+VLQ+Y G+ MPN EQPFRLNWA+FSTG+KR+ + ++
Sbjct: 134 GLSEGYGFVEFFTHATAEKVLQNYGGILMPNTEQPFRLNWATFSTGDKRSDNTPDLSIFV 193
Query: 781 *RLAPDVT 804
LA DVT
Sbjct: 194 GDLAADVT 201
>gi|82621116|gb|ABB86246.1| DNA-binding protein-like [Solanum tuberosum]
Length = 423
Score = 184 bits (466), Expect = 2e-044
Identities = 99/163 (60%), Positives = 111/163 (68%), Gaps = 9/163 (5%)
Frame = +1
Query: 271 QQQQQQWQQHQQWMAAMAMMQQQQQMMMYPPHHQYAPYNQAAAYPQFQYAPPYHQQQQ-- 444
QQQQ Q QQ QQWMA QQ M YPP Q Y Q QY P YHQQQQ
Sbjct: 10 QQQQLQQQQQQQWMAMQHYQQQWMAMQQYPPAAAMV-MQQQMMYGQ-QYMPYYHQQQQHM 67
Query: 445 -QKQRGGSGAGGDDVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTCQSEGYG 621
Q Q+ GS +D +T+WIGDL WMDE YLHTCF+ +V SVKVIRNKQT QSE YG
Sbjct: 68 IQIQQNGS----EDNRTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYG 123
Query: 622 FVEFLSRSAAEEVLQSYSGVTMPNAEQPFRLNWASFSTGEKRA 750
F+EF + AAE+VLQSY+G MPNAEQPFRLNW++FSTGEKRA
Sbjct: 124 FIEFNTHEAAEKVLQSYNGTMMPNAEQPFRLNWSAFSTGEKRA 166
>gi|9663769|emb|CAC01238.1| RNA Binding Protein 47 [Nicotiana plumbaginifolia]
Length = 428
Score = 183 bits (463), Expect = 4e-044
Identities = 102/182 (56%), Positives = 118/182 (64%), Gaps = 7/182 (3%)
Frame = +1
Query: 271 QQQQQQWQQHQQWMAAMAMMQQQQQMMMYPPHHQYAPYNQAAAYPQFQYAPPY--HQQQQ 444
QQQQQQ QQ QQ AM QQQ M YP Q Y Q QY P Y HQQQQ
Sbjct: 11 QQQQQQHQQQQQQWLAMQQYQQQWMAMQYPA--AAMAMQQQMMYGQ-QYMPYYQQHQQQQ 67
Query: 445 QKQRGGS--GAGGDDVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTCQSEGY 618
+ Q+ + + +D KT+WIGDL WMDE+YLH+CFS +V SVK+IRNKQT QSE Y
Sbjct: 68 KMQQSPTQIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERY 127
Query: 619 GFVEFLSRSAAEEVLQSYSGVTMPNAEQPFRLNWASFSTGEKRAPKHGQIYLYS*RLAPD 798
GFVEF + +AAE+VLQSY+G MPN EQPFRLNWA FSTGEKRA ++ LA D
Sbjct: 128 GFVEFNTHAAAEKVLQSYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASD 187
Query: 799 VT 804
VT
Sbjct: 188 VT 189
>gi|1899188|gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]
Length = 428
Score = 179 bits (454), Expect = 4e-043
Identities = 99/181 (54%), Positives = 115/181 (63%), Gaps = 7/181 (3%)
Frame = +1
Query: 271 QQQQQQWQQHQQWMAAMAMMQQQQQMMMYPPHHQYAPYNQAAAYPQFQYAPPYHQQQQQK 450
QQQQQQ QQ QQWM AM QQQ M YP ++ HQQQQQK
Sbjct: 13 QQQQQQQQQQQQWM-AMQQYQQQWMAMQYPAAAMAMRNDRCMV---SNTCLQQHQQQQQK 68
Query: 451 QRGGS---GAGGDDVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTCQSEGYG 621
+ + +D KT+WIGDL WMDE+YLH+CFS +V SVK+IRNKQT QSE YG
Sbjct: 69 MQQSPTQIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYG 128
Query: 622 FVEFLSRSAAEEVLQSYSGVTMPNAEQPFRLNWASFSTGEKRAPKHGQIYLYS*RLAPDV 801
FVEF + +AAE+VLQSY+G MPNAEQPFRLNWA FSTGEKRA ++ LA DV
Sbjct: 129 FVEFNTHAAAEKVLQSYNGTMMPNAEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDV 188
Query: 802 T 804
T
Sbjct: 189 T 189
>gi|225444438|ref|XP_002266857.1| PREDICTED: hypothetical protein, partial
[Vitis vinifera]
Length = 265
Score = 177 bits (447), Expect = 3e-042
Identities = 93/183 (50%), Positives = 113/183 (61%), Gaps = 9/183 (4%)
Frame = +1
Query: 256 PPPPSQQQQQQWQQHQQWMAAMAMMQQQQQMMMYPPHHQYAPYNQAAAYPQFQYAPPYHQ 435
PPP QQQQ W QQ M Q PP HQ AP Q PQ P+ Q
Sbjct: 14 PPPTMDQQQQPWMMMQQPPPQMWAQQP-------PPPHQVAPPPQHP--PQQPQPHPHPQ 64
Query: 436 QQQQKQRGGSGAGGDDVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTCQSEG 615
QQ + + A D+V+TLWIGDL +WMDE Y++ CF+HT +V+SVK+IRNKQT Q EG
Sbjct: 65 QQMPQYQPAQPASADEVRTLWIGDLQYWMDENYINGCFAHTGEVTSVKLIRNKQTNQLEG 124
Query: 616 YGFVEFLSRSAAEEVLQSYSGVTMPNAEQPFRLNWASFSTGEKRAPKHGQIYLYS*RLAP 795
YGF+EF+SR+AAE +LQ+Y+G MPN EQ FRLNWASF GEKR ++ LA
Sbjct: 125 YGFIEFISRAAAERILQTYNGSLMPNVEQNFRLNWASFGVGEKRPDNTPDFTIFVGDLAS 184
Query: 796 DVT 804
DVT
Sbjct: 185 DVT 187
>gi|15594035|emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum]
Length = 456
Score = 176 bits (445), Expect = 5e-042
Identities = 92/191 (48%), Positives = 120/191 (62%), Gaps = 6/191 (3%)
Frame = +1
Query: 244 AGTTPPPPSQQQQQQWQQHQQWMAAMAMMQQQQQMMMYPPHHQYAPYNQAAAYPQF-QYA 420
+G T P QQQ W Q AAM M YPPH Y PY+ + +
Sbjct: 34 SGGTVVPVVAAQQQPWVAMQYPAAAMVMQHPMMPAPHYPPH--YMPYHPHHHHHLLHHHP 91
Query: 421 PPYHQQQQQKQRGGSGA---GGDDVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRN 591
PP H +Q+GG G+ ++ +T+W+GDLL+WMDE YL CF+ TN+V+S+KVIRN
Sbjct: 92 PPPHSPSPHQQQGGGGSNNNNNNENRTIWVGDLLNWMDEDYLRNCFASTNEVASIKVIRN 151
Query: 592 KQTCQSEGYGFVEFLSRSAAEEVLQSYSGVTMPNAEQPFRLNWASFSTGEKRAPKHGQIY 771
KQT SEGYGFVEF + +AAE+VLQ+YS +TMPN +QPFRLNWA+FS G+KRA +
Sbjct: 152 KQTGFSEGYGFVEFFTHAAAEKVLQTYSCMTMPNVDQPFRLNWATFSMGDKRANNGSDLS 211
Query: 772 LYS*RLAPDVT 804
++ LA DVT
Sbjct: 212 IFVGDLAADVT 222
>gi|225458533|ref|XP_002284337.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 418
Score = 175 bits (443), Expect = 8e-042
Identities = 90/182 (49%), Positives = 116/182 (63%), Gaps = 11/182 (6%)
Frame = +1
Query: 259 PPPSQQQQQQWQQHQQWMAAMAMMQQQQQMMMYPPHHQYAPYNQAAAYPQFQYAPPYHQQ 438
PPP Q QQW Q AAM M Q YP H + Y+ Q Q HQQ
Sbjct: 19 PPPPPPQPQQWMAMQYPAAAMVMQHQMMPPQHYPQH--FVAYHHQPHQYQHQ-----HQQ 71
Query: 439 QQQKQRGGSGAGGDDVKTLWIGDLLHWMDETYLHTCFSHTNQVSSVKVIRNKQTCQSEGY 618
Q Q+Q+G + D +T+W+GDL +WMDE YLH+CF+ T +++S+KVIRNKQT SEGY
Sbjct: 72 QHQQQQGSNA----DNRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGY 127
Query: 619 GFVEFLSRSAAEEVLQSYSGVTMPNAEQPFRLNWASFSTGEKRAPKHGQIYLYS*RLAPD 798
GFVEF S +AAE+VLQ Y+GV MPN +QPFRLNWA+FS G+KR+ + ++ LA D
Sbjct: 128 GFVEFFSHAAAEKVLQGYAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASD 187
Query: 799 VT 804
V+
Sbjct: 188 VS 189
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 748,178,612,197
Number of Sequences: 15229318
Number of Extensions: 748178612197
Number of Successful Extensions: 201585142
Number of sequences better than 0.0: 0
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