BLASTX 7.6.2
Query= UN06640 /QuerySize=1789
(1788 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q2HJ41|PRP18_BOVIN Pre-mRNA-splicing factor 18 OS=Bos taurus ... 137 3e-031
sp|Q6GMH0|PRP18_DANRE Pre-mRNA-splicing factor 18 OS=Danio rerio... 137 3e-031
sp|Q99633|PRP18_HUMAN Pre-mRNA-splicing factor 18 OS=Homo sapien... 137 3e-031
sp|Q8BM39|PRP18_MOUSE Pre-mRNA-splicing factor 18 OS=Mus musculu... 137 3e-031
sp|Q5RE03|PRP18_PONAB Pre-mRNA-splicing factor 18 OS=Pongo abeli... 137 3e-031
sp|Q9JKB8|PRP18_RAT Pre-mRNA-splicing factor 18 OS=Rattus norveg... 137 3e-031
sp|Q5EAV6|PRP18_XENLA Pre-mRNA-splicing factor 18 OS=Xenopus lae... 133 4e-030
sp|O94406|PRP18_SCHPO Pre-mRNA-splicing factor 18 OS=Schizosacch... 95 2e-018
sp|P33411|PRP18_YEAST Pre-mRNA-splicing factor 18 OS=Saccharomyc... 72 2e-011
>sp|Q2HJ41|PRP18_BOVIN Pre-mRNA-splicing factor 18 OS=Bos taurus GN=PRPF18 PE=2
SV=1
Length = 342
Score = 137 bits (344), Expect = 3e-031
Identities = 59/103 (57%), Positives = 84/103 (81%)
Frame = +3
Query: 702 QGLPSDIRQALMVMVKHCIKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIHT 881
+ LP+DI++++ ++K ++R+Y+ A D Y+++AIGNAPWPIGVTMVGIH R+ REKI +
Sbjct: 240 RNLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFS 299
Query: 882 NSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTMPSKAVEFNSL 1010
VAH++NDET RKY+Q +KRLMT CQ+ +PT PSK VE+N+L
Sbjct: 300 KHVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL 342
>sp|Q6GMH0|PRP18_DANRE Pre-mRNA-splicing factor 18 OS=Danio rerio GN=prpf18 PE=2
SV=1
Length = 342
Score = 137 bits (344), Expect = 3e-031
Identities = 59/103 (57%), Positives = 84/103 (81%)
Frame = +3
Query: 702 QGLPSDIRQALMVMVKHCIKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIHT 881
+ LP+DI++++ ++K ++R+Y+ A D Y+++AIGNAPWPIGVTMVGIH R+ REKI +
Sbjct: 240 KNLPADIKESITDIIKFMLEREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFS 299
Query: 882 NSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTMPSKAVEFNSL 1010
VAH++NDET RKY+Q +KRLMT CQ+ +PT PSK VE+N+L
Sbjct: 300 KHVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL 342
>sp|Q99633|PRP18_HUMAN Pre-mRNA-splicing factor 18 OS=Homo sapiens GN=PRPF18
PE=1 SV=1
Length = 342
Score = 137 bits (344), Expect = 3e-031
Identities = 59/103 (57%), Positives = 84/103 (81%)
Frame = +3
Query: 702 QGLPSDIRQALMVMVKHCIKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIHT 881
+ LP+DI++++ ++K ++R+Y+ A D Y+++AIGNAPWPIGVTMVGIH R+ REKI +
Sbjct: 240 RNLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFS 299
Query: 882 NSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTMPSKAVEFNSL 1010
VAH++NDET RKY+Q +KRLMT CQ+ +PT PSK VE+N+L
Sbjct: 300 KHVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL 342
>sp|Q8BM39|PRP18_MOUSE Pre-mRNA-splicing factor 18 OS=Mus musculus GN=Prpf18
PE=1 SV=1
Length = 342
Score = 137 bits (344), Expect = 3e-031
Identities = 59/103 (57%), Positives = 84/103 (81%)
Frame = +3
Query: 702 QGLPSDIRQALMVMVKHCIKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIHT 881
+ LP+DI++++ ++K ++R+Y+ A D Y+++AIGNAPWPIGVTMVGIH R+ REKI +
Sbjct: 240 RNLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFS 299
Query: 882 NSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTMPSKAVEFNSL 1010
VAH++NDET RKY+Q +KRLMT CQ+ +PT PSK VE+N+L
Sbjct: 300 KHVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL 342
>sp|Q5RE03|PRP18_PONAB Pre-mRNA-splicing factor 18 OS=Pongo abelii GN=PRPF18
PE=2 SV=1
Length = 342
Score = 137 bits (344), Expect = 3e-031
Identities = 59/103 (57%), Positives = 84/103 (81%)
Frame = +3
Query: 702 QGLPSDIRQALMVMVKHCIKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIHT 881
+ LP+DI++++ ++K ++R+Y+ A D Y+++AIGNAPWPIGVTMVGIH R+ REKI +
Sbjct: 240 RNLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFS 299
Query: 882 NSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTMPSKAVEFNSL 1010
VAH++NDET RKY+Q +KRLMT CQ+ +PT PSK VE+N+L
Sbjct: 300 KHVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL 342
>sp|Q9JKB8|PRP18_RAT Pre-mRNA-splicing factor 18 OS=Rattus norvegicus GN=Prpf18
PE=2 SV=1
Length = 342
Score = 137 bits (344), Expect = 3e-031
Identities = 59/103 (57%), Positives = 84/103 (81%)
Frame = +3
Query: 702 QGLPSDIRQALMVMVKHCIKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIHT 881
+ LP+DI++++ ++K ++R+Y+ A D Y+++AIGNAPWPIGVTMVGIH R+ REKI +
Sbjct: 240 RNLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFS 299
Query: 882 NSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTMPSKAVEFNSL 1010
VAH++NDET RKY+Q +KRLMT CQ+ +PT PSK VE+N+L
Sbjct: 300 KHVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL 342
>sp|Q5EAV6|PRP18_XENLA Pre-mRNA-splicing factor 18 OS=Xenopus laevis GN=prpf18
PE=2 SV=1
Length = 342
Score = 133 bits (334), Expect = 4e-030
Identities = 58/103 (56%), Positives = 83/103 (80%)
Frame = +3
Query: 702 QGLPSDIRQALMVMVKHCIKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIHT 881
+ LP+DI++++ ++K ++R+Y+ A D Y+++AIGNAPWPIGVTMVGIH R+ REKI +
Sbjct: 240 KNLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFS 299
Query: 882 NSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTMPSKAVEFNSL 1010
VAH++NDET RKY+Q +KRLMT CQ+ + T PSK VE+N+L
Sbjct: 300 KHVAHVLNDETQRKYIQGLKRLMTICQKYFSTDPSKCVEYNAL 342
>sp|O94406|PRP18_SCHPO Pre-mRNA-splicing factor 18 OS=Schizosaccharomyces pombe
GN=prp18 PE=2 SV=1
Length = 343
Score = 95 bits (234), Expect = 2e-018
Identities = 47/106 (44%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Frame = +3
Query: 666 LSALLDLYVYKLQGLPSDIRQALMVMVKHCIKRDYLAAMDHYIKLAIGNAPWPIGVTMVG 845
L L+ L V + L DI +++ + C K +++ A D Y++L IGNAPWPIGVTMVG
Sbjct: 236 LDVLIQLIVD--EALNDDIFKSIAEICYRCQKHEFVKANDMYLRLTIGNAPWPIGVTMVG 293
Query: 846 IHERSAREKIHTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTMP 983
IHERSA +++ N ++I+ DE RK LQ++KR +TF +R +P
Sbjct: 294 IHERSAHQRLQANPSSNILKDEKKRKCLQALKRFITFQERESSNLP 339
>sp|P33411|PRP18_YEAST Pre-mRNA-splicing factor 18 OS=Saccharomyces cerevisiae
GN=PRP18 PE=1 SV=3
Length = 251
Score = 72 bits (174), Expect = 2e-011
Identities = 43/105 (40%), Positives = 64/105 (60%), Gaps = 3/105 (2%)
Frame = +3
Query: 651 LYIEVLSALLDLYV-YKLQGLPSDIRQALMVMVKHCIK-RDYLAAMDHYIKLAIGNAPWP 824
L+++ AL L + + L D+ +L ++ H + ++ A+ Y+KL+IGN WP
Sbjct: 135 LFLDTKKALFPLLLQLRRNQLAPDLLISLATVLYHLQQPKEINLAVQSYMKLSIGNVAWP 194
Query: 825 IGVTMVGIHERSAREKIH-TNSVAHIMNDETTRKYLQSVKRLMTF 956
IGVT VGIH RSA KI + A+IM DE TR ++ S+KRL+TF
Sbjct: 195 IGVTSVGIHARSAHSKIQGGRNAANIMIDERTRLWITSIKRLITF 239
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,099,029,888
Number of Sequences: 518415
Number of Extensions: 26099029888
Number of Successful Extensions: 175876120
Number of sequences better than 0.0: 0
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