BLASTX 7.6.2
Query= UN06688 /QuerySize=923
(922 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|89257658|gb|ABD65145.1| nuclear RNA binding protein, putative... 427 2e-117
gi|89257578|gb|ABD65067.1| nuclear RNA binding protein, putative... 385 6e-105
gi|297804430|ref|XP_002870099.1| hypothetical protein ARALYDRAFT... 325 9e-087
gi|195604856|gb|ACG24258.1| plasminogen activator inhibitor 1 RN... 292 9e-077
gi|15236552|ref|NP_193485.1| plasminogen activator inhibitor 1 R... 291 1e-076
gi|21593013|gb|AAM64962.1| nuclear RNA binding protein A-like pr... 291 1e-076
gi|297790933|ref|XP_002863351.1| hypothetical protein ARALYDRAFT... 272 5e-071
gi|89257422|gb|ABD64914.1| nuclear RNA binding protein, putative... 263 3e-068
gi|89257548|gb|ABD65038.1| nuclear RNA binding protein, putative... 253 3e-065
gi|15238039|ref|NP_199532.1| hyaluronan / mRNA binding-like prot... 251 1e-064
gi|21553991|gb|AAM63072.1| nuclear RNA binding protein A-like pr... 251 1e-064
gi|297804492|ref|XP_002870130.1| hypothetical protein ARALYDRAFT... 249 7e-064
gi|15235894|ref|NP_193416.1| hyaluronan / mRNA binding domain-co... 248 8e-064
gi|145333231|ref|NP_001078400.1| hyaluronan / mRNA binding domai... 248 8e-064
gi|21537052|gb|AAM61393.1| nuclear antigen homolog [Arabidopsis ... 245 9e-063
gi|145333210|ref|NP_001078399.1| hyaluronan / mRNA binding domai... 235 7e-060
gi|145334757|ref|NP_001078724.1| hyaluronan / mRNA binding-like ... 204 2e-050
gi|255541028|ref|XP_002511578.1| RNA binding protein, putative [... 195 1e-047
gi|145334755|ref|NP_001078723.1| hyaluronan / mRNA binding-like ... 136 8e-030
>gi|89257658|gb|ABD65145.1| nuclear RNA binding protein, putative [Brassica
oleracea]
Length = 353
Score = 427 bits (1096), Expect = 2e-117
Identities = 227/242 (93%), Positives = 230/242 (95%), Gaps = 9/242 (3%)
Frame = -2
Query: 921 GGRRGGYNSGESGDFERPRRNFDRQSGTGHGNGFKRDGAGRGNWGTNEDEIPPVTEESAA 742
GGRRGG+NSGESGDFERPRRNFDRQSGTGHGNGFKRDGAGRGNWGTNEDEIPPVTEESAA
Sbjct: 115 GGRRGGFNSGESGDFERPRRNFDRQSGTGHGNGFKRDGAGRGNWGTNEDEIPPVTEESAA 174
Query: 741 VVVEKSLGVEKEGGEATEANKETTPVEEK-EPEDKEMTLEEYEKVLEEKRKALQATKIEE 565
VVEKSL EKE GEAT+ANKE TPVEEK EPEDKEMTLEEYEKVLEEKRKALQATKIEE
Sbjct: 175 -VVEKSLAAEKE-GEATDANKE-TPVEEKAEPEDKEMTLEEYEKVLEEKRKALQATKIEE 231
Query: 564 RKVDTKAFETMQQLSNKKSNNDEVFIKLGTKKDKRPVEKEEKTKKSLSINEFLKPANGER 385
RKVDTK FETMQQLSNKKSNNDEVFIKLGT+KDKRPVEKEEKTKKSLSINEFLKPANGER
Sbjct: 232 RKVDTKVFETMQQLSNKKSNNDEVFIKLGTEKDKRPVEKEEKTKKSLSINEFLKPANGER 291
Query: 384 YRGAGYRGGREGGRGGRGPREGAEGRGRGPRGGADGGENQRAAAAAPKRVAPAPKIEDAA 205
YRG GYRGGRE GRGGRGPREGAEGRGRGPR GADGGENQR AAAPKRVAPAPKIEDAA
Sbjct: 292 YRG-GYRGGRE-GRGGRGPREGAEGRGRGPR-GADGGENQR--AAAPKRVAPAPKIEDAA 346
Query: 204 QF 199
QF
Sbjct: 347 QF 348
>gi|89257578|gb|ABD65067.1| nuclear RNA binding protein, putative [Brassica
oleracea]
Length = 367
Score = 385 bits (988), Expect = 6e-105
Identities = 210/262 (80%), Positives = 218/262 (83%), Gaps = 21/262 (8%)
Frame = -2
Query: 918 GRRGGYNSGESGDFERPRRNFDRQSGTGHGNGFKRDGAGRGNWGTNEDEIPPVTEESAAV 739
GRRGGYN+GESGDFERPRRN+DRQSG HGN FKRDGAGRGNWGT EDEIPPVTEES A
Sbjct: 110 GRRGGYNNGESGDFERPRRNYDRQSGAAHGNEFKRDGAGRGNWGTTEDEIPPVTEES-AT 168
Query: 738 VVEKSLGVEKEGGEATEANKETTPVE---EKEPEDKEMTLEEYEKVLEEKRKALQATKIE 568
VVEK L VEKE GEAT+ANKE TPVE EKEPED EMTLEEYEKVLEEKRKALQATK+E
Sbjct: 169 VVEKDLAVEKE-GEATDANKE-TPVEAQAEKEPEDTEMTLEEYEKVLEEKRKALQATKVE 226
Query: 567 ERKVDTKAFETMQQLSNKKSNNDEVFIKLGTKKDKRPVEKEEKTKKSLSINEFLKPANGE 388
ERKVDTK FE MQQLS+KKSNNDEVFIKLGT+KDKRPVE+EEKTKKSLSINEFLKPANGE
Sbjct: 227 ERKVDTKVFEAMQQLSSKKSNNDEVFIKLGTEKDKRPVEREEKTKKSLSINEFLKPANGE 286
Query: 387 RYRGAGYRGG------REGG-RGGRGPREGAEGRGRGPRGGADGGENQR-------AAAA 250
YRG GYRGG REG RGGRGPREGA+ GRGPRG GG R AA
Sbjct: 287 SYRG-GYRGGRASRGPREGADRGGRGPREGADRGGRGPRGDDRGGRGPRRDNGGGEQKAA 345
Query: 249 APKRVAPAPKIEDAAQFPTLGK 184
APK VAPAPKIEDAAQFPTLGK
Sbjct: 346 APKFVAPAPKIEDAAQFPTLGK 367
>gi|297804430|ref|XP_002870099.1| hypothetical protein ARALYDRAFT_493124
[Arabidopsis lyrata subsp. lyrata]
Length = 372
Score = 325 bits (831), Expect = 9e-087
Identities = 178/259 (68%), Positives = 205/259 (79%), Gaps = 19/259 (7%)
Frame = -2
Query: 921 GGRRGGYNSGESGDFERPRRNFDRQSGTGHGNGFKRDGAGRGNWGTNEDEIPPVTEESAA 742
G RRGGY++G+SGDFERPR+N++R S T HGN KRDGAGRGNWGT +D+I PVTEE++A
Sbjct: 120 GDRRGGYSNGDSGDFERPRKNYERHSRTAHGNEVKRDGAGRGNWGTTQDDIAPVTEETSA 179
Query: 741 VVVEKSLGVEKEG--GEATEANKETTPVE---EKEPEDKEMTLEEYEKVLEEKRKALQAT 577
VV+K+L VEK+G GEAT+ANKE TP E E++PEDKEMTLEEYEKVLEEK+KALQAT
Sbjct: 180 -VVDKNLTVEKQGGEGEATDANKE-TPAEVQAEEKPEDKEMTLEEYEKVLEEKKKALQAT 237
Query: 576 KIEERKVDTKAFETMQQLSNKKSNNDEVFIKLGTKKDKRPVEKEEKTKKSLSINEFLKPA 397
K+EERKVDTKAFE MQQLS+KKSNNDEVFIKLGT+KDKR E+EEKT+KSLSINEFLKPA
Sbjct: 238 KVEERKVDTKAFEAMQQLSSKKSNNDEVFIKLGTEKDKRVTEREEKTRKSLSINEFLKPA 297
Query: 396 NGERYRGAGYRGGREGGRGGRGPR------EGAEGRGRGPRGGADGGENQR--AAAAAPK 241
+G+ YR RGGRE GR GRGPR +G + G R +GG NQR AAA
Sbjct: 298 DGKNYRP---RGGRE-GRDGRGPRGEGNQKDGGGNQRDGGRNPREGGRNQRDGGAAARAP 353
Query: 240 RVAPAPKIEDAAQFPTLGK 184
APAP I D AQFPTLGK
Sbjct: 354 APAPAPAIGDTAQFPTLGK 372
>gi|195604856|gb|ACG24258.1| plasminogen activator inhibitor 1 RNA-binding
protein [Zea mays]
Length = 360
Score = 292 bits (745), Expect = 9e-077
Identities = 163/242 (67%), Positives = 188/242 (77%), Gaps = 13/242 (5%)
Frame = -2
Query: 912 RGGY-NSGESGDFERPRRNFDRQSGTGHGNGFKRDGAGRGNWGTNEDEIPPVTEESAAVV 736
RG Y N G+SGD ERPR+N+DR S T +GN KRDGAGR NWGT +D+I PVTEES A V
Sbjct: 121 RGSYSNGGDSGDSERPRKNYDRHSRTAYGNEDKRDGAGRANWGTTQDDITPVTEESTA-V 179
Query: 735 VEKSLGVEKEG--GEATEANKETTPVE--EKEPEDKEMTLEEYEKVLEEKRKALQATKIE 568
V+K+L VEK+ GEAT+A E TP E E++PEDKEMTLEEYEKVLEEK+KALQATK+E
Sbjct: 180 VDKNLTVEKQDGEGEATDAKNE-TPAEKAEEKPEDKEMTLEEYEKVLEEKKKALQATKVE 238
Query: 567 ERKVDTKAFETMQQLSNKKSNNDEVFIKLGTKKDKRPVEKEEKTKKSLSINEFLKPANGE 388
ERKVDTKAFE MQQLS+KKSNNDEVFIKLGT+KDKR E+EEKT+KSLSINEFLKPA+G+
Sbjct: 239 ERKVDTKAFEAMQQLSSKKSNNDEVFIKLGTEKDKRITEREEKTRKSLSINEFLKPADGK 298
Query: 387 RYRGAGYRGGREGGRGGRGPREGAEGRGRGPRGGADGGENQRAAAAAPKRVAPAPKIEDA 208
Y RGG +GGR GRGPREG + G R +GG NQR AA + AP P I D+
Sbjct: 299 SYYRP--RGGYQGGREGRGPREG--NQRDGGRNQREGGRNQRDGGAAAQ--APTPAIGDS 352
Query: 207 AQ 202
AQ
Sbjct: 353 AQ 354
>gi|15236552|ref|NP_193485.1| plasminogen activator inhibitor 1 RNA-binding
protein [Arabidopsis thaliana]
Length = 360
Score = 291 bits (743), Expect = 1e-076
Identities = 163/242 (67%), Positives = 188/242 (77%), Gaps = 13/242 (5%)
Frame = -2
Query: 912 RGGY-NSGESGDFERPRRNFDRQSGTGHGNGFKRDGAGRGNWGTNEDEIPPVTEESAAVV 736
RG Y N G+SGD ERPR+N+DR S T +GN KRDGAGR NWGT +D+I PVTEES A V
Sbjct: 121 RGSYSNGGDSGDSERPRKNYDRHSRTAYGNEDKRDGAGRANWGTTQDDITPVTEESTA-V 179
Query: 735 VEKSLGVEKEG--GEATEANKETTPVE--EKEPEDKEMTLEEYEKVLEEKRKALQATKIE 568
V+K+L VEK+ GEAT+A E TP E E++PEDKEMTLEEYEKVLEEK+KALQATK+E
Sbjct: 180 VDKNLTVEKQDGEGEATDAKNE-TPAEKAEEKPEDKEMTLEEYEKVLEEKKKALQATKVE 238
Query: 567 ERKVDTKAFETMQQLSNKKSNNDEVFIKLGTKKDKRPVEKEEKTKKSLSINEFLKPANGE 388
ERKVDTKAFE MQQLS+KKSNNDEVFIKLGT+KDKR E+EEKT+KSLSINEFLKPA+G+
Sbjct: 239 ERKVDTKAFEAMQQLSSKKSNNDEVFIKLGTEKDKRITEREEKTRKSLSINEFLKPADGK 298
Query: 387 RYRGAGYRGGREGGRGGRGPREGAEGRGRGPRGGADGGENQRAAAAAPKRVAPAPKIEDA 208
Y RGG +GGR GRGPREG + G R +GG NQR AA + AP P I D+
Sbjct: 299 SYYRP--RGGYQGGREGRGPREG--NQRDGGRNLREGGRNQRDGGAAAQ--APTPAIGDS 352
Query: 207 AQ 202
AQ
Sbjct: 353 AQ 354
>gi|21593013|gb|AAM64962.1| nuclear RNA binding protein A-like protein
[Arabidopsis thaliana]
Length = 360
Score = 291 bits (743), Expect = 1e-076
Identities = 163/242 (67%), Positives = 188/242 (77%), Gaps = 13/242 (5%)
Frame = -2
Query: 912 RGGY-NSGESGDFERPRRNFDRQSGTGHGNGFKRDGAGRGNWGTNEDEIPPVTEESAAVV 736
RG Y N G+SGD ERPR+N+DR S T +GN KRDGAGR NWGT +D+I PVTEES A V
Sbjct: 121 RGSYSNGGDSGDSERPRKNYDRHSRTAYGNEEKRDGAGRANWGTPQDDITPVTEESTA-V 179
Query: 735 VEKSLGVEKEG--GEATEANKETTPVE--EKEPEDKEMTLEEYEKVLEEKRKALQATKIE 568
V+K+L VEK+ GEAT+A E TP E E++PEDKEMTLEEYEKVLEEK+KALQATK+E
Sbjct: 180 VDKNLTVEKQDGEGEATDAKNE-TPAEKAEEKPEDKEMTLEEYEKVLEEKKKALQATKVE 238
Query: 567 ERKVDTKAFETMQQLSNKKSNNDEVFIKLGTKKDKRPVEKEEKTKKSLSINEFLKPANGE 388
ERKVDTKAFE MQQLS+KKSNNDEVFIKLGT+KDKR E+EEKT+KSLSINEFLKPA+G+
Sbjct: 239 ERKVDTKAFEAMQQLSSKKSNNDEVFIKLGTEKDKRITEREEKTRKSLSINEFLKPADGK 298
Query: 387 RYRGAGYRGGREGGRGGRGPREGAEGRGRGPRGGADGGENQRAAAAAPKRVAPAPKIEDA 208
Y RGG +GGR GRGPREG + G R +GG NQR AA + AP P I D+
Sbjct: 299 SYYRP--RGGYQGGREGRGPREG--NQRDGGRNQREGGRNQRDGGAAAQ--APTPAIGDS 352
Query: 207 AQ 202
AQ
Sbjct: 353 AQ 354
>gi|297790933|ref|XP_002863351.1| hypothetical protein ARALYDRAFT_494257
[Arabidopsis lyrata subsp. lyrata]
Length = 363
Score = 272 bits (695), Expect = 5e-071
Identities = 153/239 (64%), Positives = 175/239 (73%), Gaps = 23/239 (9%)
Frame = -2
Query: 921 GGRRGGYNSGESGDFERPRRNFDRQSGTGHGNGFKRDGAGRGNWGTNEDEIPPVTEESAA 742
G RRGG+ +GESGD ERPRRN++R SGTG GNG KRDG GRGNWGT ED+IPPVTEE
Sbjct: 129 GPRRGGFANGESGDVERPRRNYERHSGTGRGNGLKRDGGGRGNWGTTEDDIPPVTEE-PT 187
Query: 741 VVVEKSLGVEKEGG--EATEANKETTPVEE-----KEPEDKEMTLEEYEKVLEEKRKALQ 583
VEKS EK+GG E EANKE T E+ +E E +EMTLEEYEK+LEEK+KALQ
Sbjct: 188 TEVEKSPVAEKQGGEDETAEANKEPTAEEKAQKEAEEAEAREMTLEEYEKILEEKKKALQ 247
Query: 582 ATKIEERKVDTKAFETMQQLSNKKSNNDEVFIKLGTKKDKRPVEKEEKTKKSLSINEFLK 403
ATK+EERKVDTK FE+MQQLSNKK+ ++E+FIKLG++KDKR + EKTKKSLSINEFLK
Sbjct: 248 ATKVEERKVDTKVFESMQQLSNKKNTDEEIFIKLGSEKDKRK-DAAEKTKKSLSINEFLK 306
Query: 402 PANGERYRGAGYRGGREGGRGGRGPREGAEGRGRGPRGGADGGENQRAAAAAPKRVAPA 226
PA+GERY G RGG GRGG G R G E RG DGG + AAP APA
Sbjct: 307 PADGERYNG---RGGHR-GRGGCGGRGGREHRG-------DGGNQRNVKPAAP---APA 351
>gi|89257422|gb|ABD64914.1| nuclear RNA binding protein, putative [Brassica
oleracea]
Length = 336
Score = 263 bits (672), Expect = 3e-068
Identities = 144/218 (66%), Positives = 163/218 (74%), Gaps = 11/218 (5%)
Frame = -2
Query: 921 GGRRGGYNSGESGDFERPRRNFDRQSGTGHGNGFKRDGAGRGNWGTNEDEIPPVTEESAA 742
GG GG+ +G++GD ERPRR +DR+SGTG N KR+G GRGNWGT ED+I P TEE
Sbjct: 107 GGHIGGFANGKTGDVERPRRVYDRRSGTGRSNDVKREGGGRGNWGTPEDDIQPATEE-PT 165
Query: 741 VVVEKSLGVEKEGGE-ATEANKETTPVEEKEPEDKEMTLEEYEKVLEEKRKALQATKIEE 565
VEKS EKEGGE AT K+ P E+EPEDKEMTLEEYEK+LEEK+KALQATK+EE
Sbjct: 166 TEVEKSPVAEKEGGEDATTDAKKEAPEVEQEPEDKEMTLEEYEKILEEKKKALQATKVEE 225
Query: 564 RKVDTKAFETMQQLSNKKSNNDEVFIKLGTKKDKR--PVEKEEKTKKSLSINEFLKPANG 391
RKVDTK FE+MQQLSNKKSN++E+FIKLG+ KDKR EKEEK KKSLSINEFLKPANG
Sbjct: 226 RKVDTKVFESMQQLSNKKSNDEEIFIKLGSDKDKRKDAAEKEEKAKKSLSINEFLKPANG 285
Query: 390 ERYR-GAGYRGGREGGRGGRGPREG-AEGRGRGPRGGA 283
E Y GYR GRGGRG R+G G G GGA
Sbjct: 286 ETYNPRGGYR-----GRGGRGQRDGKVNGGGNQRNGGA 318
>gi|89257548|gb|ABD65038.1| nuclear RNA binding protein, putative [Brassica
oleracea]
Length = 336
Score = 253 bits (645), Expect = 3e-065
Identities = 141/214 (65%), Positives = 161/214 (75%), Gaps = 14/214 (6%)
Frame = -2
Query: 921 GGRRGGYNSGESGDFERPRRNFDRQSGTGHGNGFKRDGAGRGNWGTNEDEIPPVTEESAA 742
GG+RGG +G +GD R F+R+SGTG GN KR+G GRGNWGT ED+IPP TEE A
Sbjct: 112 GGQRGGPANGRAGD----GRVFERRSGTGRGNDLKREGGGRGNWGTPEDDIPPPTEE-AT 166
Query: 741 VVVEKSLGVEKEGGE--ATEANKETTPVE--EKEPEDKEMTLEEYEKVLEEKRKALQATK 574
VEKS EKEGGE T+A K+ E EKEPEDKEMTLEEYEK+LEEK+KALQATK
Sbjct: 167 TEVEKSPVAEKEGGEDDTTDAKKDPPADEGKEKEPEDKEMTLEEYEKILEEKKKALQATK 226
Query: 573 IEERKVDTKAFETMQQLSNKKSNNDEVFIKLGTKKDKR--PVEKEEKTKKSLSINEFLKP 400
+EERKVDTK FE+MQQLS+KK+NN+E+FIKLG+ KDKR EKEEK KKS SINEFLKP
Sbjct: 227 VEERKVDTKVFESMQQLSSKKTNNEEIFIKLGSDKDKRKDAAEKEEKAKKSFSINEFLKP 286
Query: 399 ANGERY--RGAGYRGGREGGRGGRGPREGAEGRG 304
A+GERY RG GYR GR G GGRG R+ G
Sbjct: 287 ADGERYNPRGGGYR-GRGGRNGGRGQRDEKVNEG 319
>gi|15238039|ref|NP_199532.1| hyaluronan / mRNA binding-like protein
[Arabidopsis thaliana]
Length = 357
Score = 251 bits (640), Expect = 1e-064
Identities = 141/233 (60%), Positives = 164/233 (70%), Gaps = 24/233 (10%)
Frame = -2
Query: 921 GGRRGGYNSGESGDFERPRRNFDRQSGTGHGNGFKRDGAGRGNWGTNEDEIPPVTEESAA 742
G RRGG +GESGD ERP RN+DR S TGHG G KR+G GRGNWGT ED+IPP +EE
Sbjct: 130 GPRRGGVANGESGDVERPPRNYDRHSRTGHGTGMKRNGGGRGNWGTTEDDIPPTSEE-PT 188
Query: 741 VVVEKSLGVEKEGG--EATEANKETTPVEE-----KEPEDKEMTLEEYEKVLEEKRKALQ 583
VEKS EK+GG E EA KE T E+ +E E +EMTLEEYEK+LEEK+KALQ
Sbjct: 189 TEVEKSPVAEKQGGEDETPEAKKELTAEEKAQKEAEEAEAREMTLEEYEKILEEKKKALQ 248
Query: 582 ATKIEERKVDTKAFETMQQLSNKKSNNDEVFIKLGTKKDKRPVEKEEKTKKSLSINEFLK 403
ATK+EERKVDTK FE+MQQLSNKK+ ++E+FIKLG+ K+KR + EK KKSLSINEFLK
Sbjct: 249 ATKVEERKVDTKVFESMQQLSNKKNTDEEIFIKLGSDKEKRK-DATEKAKKSLSINEFLK 307
Query: 402 PANGERYRGAGYRGGREGGRGGRGPREGAEGRGRGPRGGADGGENQRAAAAAP 244
PA+G+RY G RGG GRGGRG GRG G G + AAAP
Sbjct: 308 PADGKRYNG---RGGGSRGRGGRG------GRGEG------GNQRYAKEAAAP 345
>gi|21553991|gb|AAM63072.1| nuclear RNA binding protein A-like protein
[Arabidopsis thaliana]
Length = 357
Score = 251 bits (640), Expect = 1e-064
Identities = 141/233 (60%), Positives = 164/233 (70%), Gaps = 24/233 (10%)
Frame = -2
Query: 921 GGRRGGYNSGESGDFERPRRNFDRQSGTGHGNGFKRDGAGRGNWGTNEDEIPPVTEESAA 742
G RRGG +GESGD ERP RN+DR S TGHG G KR+G GRGNWGT ED+IPP +EE
Sbjct: 130 GPRRGGVANGESGDVERPPRNYDRHSRTGHGTGMKRNGGGRGNWGTTEDDIPPTSEE-PT 188
Query: 741 VVVEKSLGVEKEGG--EATEANKETTPVEE-----KEPEDKEMTLEEYEKVLEEKRKALQ 583
VEKS EK+GG E EA KE T E+ +E E +EMTLEEYEK+LEEK+KALQ
Sbjct: 189 TEVEKSPVAEKQGGEDETPEAKKELTAEEKAQKEAEEAEAREMTLEEYEKILEEKKKALQ 248
Query: 582 ATKIEERKVDTKAFETMQQLSNKKSNNDEVFIKLGTKKDKRPVEKEEKTKKSLSINEFLK 403
ATK+EERKVDTK FE+MQQLSNKK+ ++E+FIKLG+ K+KR + EK KKSLSINEFLK
Sbjct: 249 ATKVEERKVDTKVFESMQQLSNKKNTDEEIFIKLGSDKEKRK-DATEKAKKSLSINEFLK 307
Query: 402 PANGERYRGAGYRGGREGGRGGRGPREGAEGRGRGPRGGADGGENQRAAAAAP 244
PA+G+RY G RGG GRGGRG GRG G G + AAAP
Sbjct: 308 PADGKRYNG---RGGGSRGRGGRG------GRGEG------GNQRYAKEAAAP 345
>gi|297804492|ref|XP_002870130.1| hypothetical protein ARALYDRAFT_493188
[Arabidopsis lyrata subsp. lyrata]
Length = 358
Score = 249 bits (634), Expect = 7e-064
Identities = 136/214 (63%), Positives = 157/214 (73%), Gaps = 5/214 (2%)
Frame = -2
Query: 921 GGRRGGYNSGESGDFERPRRNFDRQSGTGHGNGFKRDGAGRGNWGTNEDEIPPVTEESAA 742
GGRRGG S E G+ ERPRR F+R+SGTG G+ FKRDG+GRGNWGT +E+ TE A
Sbjct: 133 GGRRGGL-SNEGGEGERPRRAFERRSGTGRGSDFKRDGSGRGNWGTPGEELAAETEAVAG 191
Query: 741 VVVEKSLGVEKEGGE-ATEANKETTPVEEKEPEDKEMTLEEYEKVLEEKRKALQATKIEE 565
V EK +G + + A +ANKE T VEEKEPEDKEMTL+EYEK+LEEK+KALQ+ E
Sbjct: 192 VDTEKDVGEKLAVDDVAADANKENTVVEEKEPEDKEMTLDEYEKILEEKKKALQSLATSE 251
Query: 564 RKVDTKAFETMQQLSNKKSNNDEVFIKLGTKKDKRPVEKEEKTKKSLSINEFLKPANGER 385
RKVDTK FE+MQQLSNKKS NDE+FIKLG+ KDKR EKEEK KK++SINEFLKPA GE
Sbjct: 252 RKVDTKVFESMQQLSNKKS-NDEIFIKLGSDKDKRKDEKEEKAKKAVSINEFLKPAEGEN 310
Query: 384 YRGAGYRGGREGGRGGRGPREGAEGRGRGPRGGA 283
Y G RGGR GRGGRG + G G R A
Sbjct: 311 YYRGGGRGGR--GRGGRGRGGVSSGESGGYRNEA 342
>gi|15235894|ref|NP_193416.1| hyaluronan / mRNA binding domain-containing
protein [Arabidopsis thaliana]
Length = 355
Score = 248 bits (633), Expect = 8e-064
Identities = 139/216 (64%), Positives = 159/216 (73%), Gaps = 10/216 (4%)
Frame = -2
Query: 921 GGRRGGYNSGESGDFERPRRNFDRQSGTGHGNGFKRDGAGRGNWGTNEDEIPPVTEESAA 742
GGRRGG+ S E GD ERPRR F+R+SGTG G+ FKRDG+GRGNWGT +EI TE A
Sbjct: 131 GGRRGGF-SNEGGDGERPRRAFERRSGTGRGSDFKRDGSGRGNWGTPGEEIAAETEAVAG 189
Query: 741 VVVEKSLGVEKEGGE--ATEANKETTPVEEKEPEDKEMTLEEYEKVLEEKRKALQATKIE 568
V EK +G EK + A +ANKE T VEEKEPEDKEMTL+EYEK+LEEK+KALQ+
Sbjct: 190 VETEKDVG-EKPAVDDVAADANKEDTVVEEKEPEDKEMTLDEYEKILEEKKKALQSLTTS 248
Query: 567 ERKVDTKAFETMQQLSNKKSNNDEVFIKLGTKKDKRPVEKEEKTKKSLSINEFLKPANGE 388
ERKVDTK FE+MQQLSNKKS NDE+FIKLG+ KDKR +KEEK KK++SINEFLKPA G
Sbjct: 249 ERKVDTKVFESMQQLSNKKS-NDEIFIKLGSDKDKRKDDKEEKAKKAVSINEFLKPAEGG 307
Query: 387 RYRGAGYRGGREG-GRGGRGPREGAEGRGRGPRGGA 283
Y YRGGR G GRGGRG + G G R A
Sbjct: 308 NY----YRGGRGGRGRGGRGRGGVSSGESGGYRNEA 339
>gi|145333231|ref|NP_001078400.1| hyaluronan / mRNA binding domain-containing
protein [Arabidopsis thaliana]
Length = 345
Score = 248 bits (633), Expect = 8e-064
Identities = 139/216 (64%), Positives = 159/216 (73%), Gaps = 10/216 (4%)
Frame = -2
Query: 921 GGRRGGYNSGESGDFERPRRNFDRQSGTGHGNGFKRDGAGRGNWGTNEDEIPPVTEESAA 742
GGRRGG+ S E GD ERPRR F+R+SGTG G+ FKRDG+GRGNWGT +EI TE A
Sbjct: 121 GGRRGGF-SNEGGDGERPRRAFERRSGTGRGSDFKRDGSGRGNWGTPGEEIAAETEAVAG 179
Query: 741 VVVEKSLGVEKEGGE--ATEANKETTPVEEKEPEDKEMTLEEYEKVLEEKRKALQATKIE 568
V EK +G EK + A +ANKE T VEEKEPEDKEMTL+EYEK+LEEK+KALQ+
Sbjct: 180 VETEKDVG-EKPAVDDVAADANKEDTVVEEKEPEDKEMTLDEYEKILEEKKKALQSLTTS 238
Query: 567 ERKVDTKAFETMQQLSNKKSNNDEVFIKLGTKKDKRPVEKEEKTKKSLSINEFLKPANGE 388
ERKVDTK FE+MQQLSNKKS NDE+FIKLG+ KDKR +KEEK KK++SINEFLKPA G
Sbjct: 239 ERKVDTKVFESMQQLSNKKS-NDEIFIKLGSDKDKRKDDKEEKAKKAVSINEFLKPAEGG 297
Query: 387 RYRGAGYRGGREG-GRGGRGPREGAEGRGRGPRGGA 283
Y YRGGR G GRGGRG + G G R A
Sbjct: 298 NY----YRGGRGGRGRGGRGRGGVSSGESGGYRNEA 329
>gi|21537052|gb|AAM61393.1| nuclear antigen homolog [Arabidopsis thaliana]
Length = 354
Score = 245 bits (624), Expect = 9e-063
Identities = 136/216 (62%), Positives = 159/216 (73%), Gaps = 10/216 (4%)
Frame = -2
Query: 921 GGRRGGYNSGESGDFERPRRNFDRQSGTGHGNGFKRDGAGRGNWGTNEDEIPPVTEESAA 742
GGRRGG+ S E G+ ERPRR ++R+SGTG G+ FKRDG+GRGNWGT +EI TE A
Sbjct: 130 GGRRGGF-SNEGGEGERPRRTYERRSGTGRGSDFKRDGSGRGNWGTPGEEIAAETEAVAG 188
Query: 741 VVVEKSLGVEKEGGE--ATEANKETTPVEEKEPEDKEMTLEEYEKVLEEKRKALQATKIE 568
V +K +G EK + A +ANKE T VEEKEPEDKEMTL+EYEK+LEEK+KALQ+
Sbjct: 189 VETQKDVG-EKPAVDDVAADANKENTVVEEKEPEDKEMTLDEYEKILEEKKKALQSLTTS 247
Query: 567 ERKVDTKAFETMQQLSNKKSNNDEVFIKLGTKKDKRPVEKEEKTKKSLSINEFLKPANGE 388
ERKVDTK FE+MQQLSNKKS NDE+FIKLG+ KDKR +KEEK KK++SINEFLKPA G
Sbjct: 248 ERKVDTKVFESMQQLSNKKS-NDEIFIKLGSDKDKRKDDKEEKAKKAVSINEFLKPAGGG 306
Query: 387 RYRGAGYRGGREG-GRGGRGPREGAEGRGRGPRGGA 283
Y YRGGR G GRGGRG + G G R A
Sbjct: 307 DY----YRGGRGGRGRGGRGRGGVSSGESGGYRNEA 338
>gi|145333210|ref|NP_001078399.1| hyaluronan / mRNA binding domain-containing
protein [Arabidopsis thaliana]
Length = 265
Score = 235 bits (599), Expect = 7e-060
Identities = 131/204 (64%), Positives = 150/204 (73%), Gaps = 9/204 (4%)
Frame = -2
Query: 885 GDFERPRRNFDRQSGTGHGNGFKRDGAGRGNWGTNEDEIPPVTEESAAVVVEKSLGVEKE 706
GD ERPRR F+R+SGTG G+ FKRDG+GRGNWGT +EI TE A V EK +G EK
Sbjct: 52 GDGERPRRAFERRSGTGRGSDFKRDGSGRGNWGTPGEEIAAETEAVAGVETEKDVG-EKP 110
Query: 705 GGE--ATEANKETTPVEEKEPEDKEMTLEEYEKVLEEKRKALQATKIEERKVDTKAFETM 532
+ A +ANKE T VEEKEPEDKEMTL+EYEK+LEEK+KALQ+ ERKVDTK FE+M
Sbjct: 111 AVDDVAADANKEDTVVEEKEPEDKEMTLDEYEKILEEKKKALQSLTTSERKVDTKVFESM 170
Query: 531 QQLSNKKSNNDEVFIKLGTKKDKRPVEKEEKTKKSLSINEFLKPANGERYRGAGYRGGRE 352
QQLSNKKS NDE+FIKLG+ KDKR +KEEK KK++SINEFLKPA G Y YRGGR
Sbjct: 171 QQLSNKKS-NDEIFIKLGSDKDKRKDDKEEKAKKAVSINEFLKPAEGGNY----YRGGRG 225
Query: 351 G-GRGGRGPREGAEGRGRGPRGGA 283
G GRGGRG + G G R A
Sbjct: 226 GRGRGGRGRGGVSSGESGGYRNEA 249
>gi|145334757|ref|NP_001078724.1| hyaluronan / mRNA binding-like protein
[Arabidopsis thaliana]
Length = 301
Score = 204 bits (518), Expect = 2e-050
Identities = 109/173 (63%), Positives = 129/173 (74%), Gaps = 9/173 (5%)
Frame = -2
Query: 921 GGRRGGYNSGESGDFERPRRNFDRQSGTGHGNGFKRDGAGRGNWGTNEDEIPPVTEESAA 742
G RRGG +GESGD ERP RN+DR S TGHG G KR+G GRGNWGT ED+IPP +EE
Sbjct: 130 GPRRGGVANGESGDVERPPRNYDRHSRTGHGTGMKRNGGGRGNWGTTEDDIPPTSEE-PT 188
Query: 741 VVVEKSLGVEKEGG--EATEANKETTPVEE-----KEPEDKEMTLEEYEKVLEEKRKALQ 583
VEKS EK+GG E EA KE T E+ +E E +EMTLEEYEK+LEEK+KALQ
Sbjct: 189 TEVEKSPVAEKQGGEDETPEAKKELTAEEKAQKEAEEAEAREMTLEEYEKILEEKKKALQ 248
Query: 582 ATKIEERKVDTKAFETMQQLSNKKSNNDEVFIKLGTKKDKRPVEKEEKTKKSL 424
ATK+EERKVDTK FE+MQQLSNKK+ ++E+FIKLG+ K+KR + EK KK L
Sbjct: 249 ATKVEERKVDTKVFESMQQLSNKKNTDEEIFIKLGSDKEKRK-DATEKAKKVL 300
>gi|255541028|ref|XP_002511578.1| RNA binding protein, putative [Ricinus
communis]
Length = 295
Score = 195 bits (494), Expect = 1e-047
Identities = 106/151 (70%), Positives = 119/151 (78%), Gaps = 6/151 (3%)
Frame = -2
Query: 921 GGRRGGYNSGESGDFERPRRNFDRQSGTGHGNGFKRDGAGRGNWGTNEDEIPPVTEESAA 742
GGRRGG+ +GE GD ERPRR F+R+SGTGHGN FKR+GAGRGNWGTN DEI VTEE A
Sbjct: 140 GGRRGGFANGEVGDGERPRRAFERRSGTGHGNEFKREGAGRGNWGTNTDEIAQVTEE-AV 198
Query: 741 VVVEKSLGVEKE--GGEATEANKE--TTPVEEKEPEDKEMTLEEYEKVLEEKRKALQATK 574
EK++G EK GEA + KE T EEK+PEDKEMTLEEYEKVLEEKRKALQATK
Sbjct: 199 NEGEKNMGDEKPVGEGEAVDGKKESPTNEPEEKQPEDKEMTLEEYEKVLEEKRKALQATK 258
Query: 573 IEERKVDTKAFETMQQLSNKKSNNDEVFIKL 481
EERKVDTK F +MQQLS+KK D++FIKL
Sbjct: 259 AEERKVDTKEFASMQQLSSKK-GGDDIFIKL 288
>gi|145334755|ref|NP_001078723.1| hyaluronan / mRNA binding-like protein
[Arabidopsis thaliana]
Length = 305
Score = 136 bits (340), Expect = 8e-030
Identities = 77/142 (54%), Positives = 92/142 (64%), Gaps = 10/142 (7%)
Frame = -2
Query: 921 GGRRGGYNSGESGDFERPRRNFDRQSGTGHGNGFKRDGAGRGNWGTNEDEIPPVTEESAA 742
G RRGG +GESGD ERP RN+DR S TGHG G KR+G GRGNWGT ED+IPP +EE
Sbjct: 130 GPRRGGVANGESGDVERPPRNYDRHSRTGHGTGMKRNGGGRGNWGTTEDDIPPTSEE-PT 188
Query: 741 VVVEKSLGVEKEGG--EATEANKETTPVEE-----KEPEDKEMTLEEYEKVLEEKRK--A 589
VEKS EK+GG E EA KE T E+ +E E +EMTLEEYEK+LEEK+K A
Sbjct: 189 TEVEKSPVAEKQGGEDETPEAKKELTAEEKAQKEAEEAEAREMTLEEYEKILEEKKKAPA 248
Query: 588 LQATKIEERKVDTKAFETMQQL 523
+ + K +TK + QL
Sbjct: 249 EEEVAVVVVKEETKGMQKKLQL 270
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 748,178,612,197
Number of Sequences: 15229318
Number of Extensions: 748178612197
Number of Successful Extensions: 201585142
Number of sequences better than 0.0: 0
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