BLASTX 7.6.2
Query= UN06775 /QuerySize=850
(849 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G51950.1 | Symbols: | zinc finger (CCCH-type)... 373 8e-104
TAIR9_protein||AT3G51950.2 | Symbols: | zinc finger (CCCH-type)... 373 8e-104
TAIR9_protein||AT3G63450.1 | Symbols: | RNA binding / nucleic a... 109 2e-024
TAIR9_protein||AT3G63450.2 | Symbols: | RNA binding / nucleic a... 109 2e-024
TAIR9_protein||AT3G21100.2 | Symbols: | RNA binding / nucleic a... 66 3e-011
TAIR9_protein||AT1G51520.1 | Symbols: | nucleic acid binding / ... 62 5e-010
TAIR9_protein||AT1G51520.2 | Symbols: | nucleic acid binding / ... 62 5e-010
TAIR9_protein||AT5G12440.1 | Symbols: | nucleic acid binding / ... 59 3e-009
TAIR9_protein||AT2G05160.1 | Symbols: | zinc finger (CCCH-type)... 57 2e-008
TAIR9_protein||AT3G52980.1 | Symbols: | RNA recognition motif (... 57 2e-008
>TAIR9_protein||AT3G51950.1 | Symbols: | zinc finger (CCCH-type) family protein
/ RNA recognition motif (RRM)-containing protein |
chr3:19278244-19280407 REVERSE
Length = 541
Score = 373 bits (957), Expect = 8e-104
Identities = 199/243 (81%), Positives = 213/243 (87%), Gaps = 14/243 (5%)
Frame = +1
Query: 91 MDGYEATRIVLSRIQALDPANASKIMGLLLLQDHGEKEMIRLAFGPENLVHSVIAKAKKE 270
MDGYEATRIVLSRIQ+LDP NASKIMGLLLLQDHGEKEMIRLAFGPE LVHSVI KAKKE
Sbjct: 1 MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60
Query: 271 LGLMSCSRPLWC-QEELISPKNNGRGSSLNPASLPFYANGGGRSFTDMTNEFEFIDDVN- 444
LGLM+CSR W Q+ELISPKNN RGSSLNPASLPFYAN GGRS D+TN+FE +DD+N
Sbjct: 61 LGLMNCSRSPWSHQDELISPKNN-RGSSLNPASLPFYAN-GGRSSRDLTNDFELMDDMNS 118
Query: 445 -----LGSVHARSGSCGLDGLGF-GDSELGFGGVPCSYFARGFCKNGSSCRFVHSDGGGE 606
LGSVHARSGSC LDGLG+ GDS+LGFGGVPCSYFARGFCKNG+SCRFVHSDGG +
Sbjct: 119 RSTDFLGSVHARSGSCVLDGLGYGGDSDLGFGGVPCSYFARGFCKNGASCRFVHSDGGAD 178
Query: 607 LVGSPSRMELLRSNSVPPRLAHQFMTRS---SFSPKGVNMQNTDAQRAAAAALMMGDELQ 777
LVGSPSR+ELLRSNSVPPRLAH FMTRS SFS KGVN+Q D QR AAAALM+GDELQ
Sbjct: 179 LVGSPSRIELLRSNSVPPRLAHHFMTRSSLPSFSTKGVNLQQNDVQR-AAAALMIGDELQ 237
Query: 778 KLG 786
KLG
Sbjct: 238 KLG 240
>TAIR9_protein||AT3G51950.2 | Symbols: | zinc finger (CCCH-type) family protein
/ RNA recognition motif (RRM)-containing protein |
chr3:19278244-19280407 REVERSE
Length = 541
Score = 373 bits (957), Expect = 8e-104
Identities = 199/243 (81%), Positives = 213/243 (87%), Gaps = 14/243 (5%)
Frame = +1
Query: 91 MDGYEATRIVLSRIQALDPANASKIMGLLLLQDHGEKEMIRLAFGPENLVHSVIAKAKKE 270
MDGYEATRIVLSRIQ+LDP NASKIMGLLLLQDHGEKEMIRLAFGPE LVHSVI KAKKE
Sbjct: 1 MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60
Query: 271 LGLMSCSRPLWC-QEELISPKNNGRGSSLNPASLPFYANGGGRSFTDMTNEFEFIDDVN- 444
LGLM+CSR W Q+ELISPKNN RGSSLNPASLPFYAN GGRS D+TN+FE +DD+N
Sbjct: 61 LGLMNCSRSPWSHQDELISPKNN-RGSSLNPASLPFYAN-GGRSSRDLTNDFELMDDMNS 118
Query: 445 -----LGSVHARSGSCGLDGLGF-GDSELGFGGVPCSYFARGFCKNGSSCRFVHSDGGGE 606
LGSVHARSGSC LDGLG+ GDS+LGFGGVPCSYFARGFCKNG+SCRFVHSDGG +
Sbjct: 119 RSTDFLGSVHARSGSCVLDGLGYGGDSDLGFGGVPCSYFARGFCKNGASCRFVHSDGGAD 178
Query: 607 LVGSPSRMELLRSNSVPPRLAHQFMTRS---SFSPKGVNMQNTDAQRAAAAALMMGDELQ 777
LVGSPSR+ELLRSNSVPPRLAH FMTRS SFS KGVN+Q D QR AAAALM+GDELQ
Sbjct: 179 LVGSPSRIELLRSNSVPPRLAHHFMTRSSLPSFSTKGVNLQQNDVQR-AAAALMIGDELQ 237
Query: 778 KLG 786
KLG
Sbjct: 238 KLG 240
>TAIR9_protein||AT3G63450.1 | Symbols: | RNA binding / nucleic acid binding /
nucleotide binding | chr3:23427191-23428864 REVERSE
Length = 405
Score = 109 bits (272), Expect = 2e-024
Identities = 55/61 (90%), Positives = 59/61 (96%)
Frame = +1
Query: 91 MDGYEATRIVLSRIQALDPANASKIMGLLLLQDHGEKEMIRLAFGPENLVHSVIAKAKKE 270
MD YEATRIVLSRIQ LDPANASKI+GLLLLQDHGEKEMIRLAFGP+NL+HSVIAKAKK+
Sbjct: 1 MDVYEATRIVLSRIQNLDPANASKIIGLLLLQDHGEKEMIRLAFGPQNLLHSVIAKAKKD 60
Query: 271 L 273
L
Sbjct: 61 L 61
Score = 71 bits (172), Expect = 9e-013
Identities = 39/54 (72%), Positives = 45/54 (83%), Gaps = 3/54 (5%)
Frame = +1
Query: 625 RMELLRSNSVPPRLAHQFMTRSSFSPKGVNMQNTDAQRAAAAALMMGDELQKLG 786
R E+LRSNSVPPRLA+QF T FSPKGVN+Q ++AQR AAALMMGD+L KLG
Sbjct: 87 RKEVLRSNSVPPRLANQF-TGYPFSPKGVNLQQSEAQR--AAALMMGDDLHKLG 137
>TAIR9_protein||AT3G63450.2 | Symbols: | RNA binding / nucleic acid binding /
nucleotide binding | chr3:23427191-23428864 REVERSE
Length = 405
Score = 109 bits (272), Expect = 2e-024
Identities = 55/61 (90%), Positives = 59/61 (96%)
Frame = +1
Query: 91 MDGYEATRIVLSRIQALDPANASKIMGLLLLQDHGEKEMIRLAFGPENLVHSVIAKAKKE 270
MD YEATRIVLSRIQ LDPANASKI+GLLLLQDHGEKEMIRLAFGP+NL+HSVIAKAKK+
Sbjct: 1 MDVYEATRIVLSRIQNLDPANASKIIGLLLLQDHGEKEMIRLAFGPQNLLHSVIAKAKKD 60
Query: 271 L 273
L
Sbjct: 61 L 61
Score = 71 bits (172), Expect = 9e-013
Identities = 39/54 (72%), Positives = 45/54 (83%), Gaps = 3/54 (5%)
Frame = +1
Query: 625 RMELLRSNSVPPRLAHQFMTRSSFSPKGVNMQNTDAQRAAAAALMMGDELQKLG 786
R E+LRSNSVPPRLA+QF T FSPKGVN+Q ++AQR AAALMMGD+L KLG
Sbjct: 87 RKEVLRSNSVPPRLANQF-TGYPFSPKGVNLQQSEAQR--AAALMMGDDLHKLG 137
>TAIR9_protein||AT3G21100.2 | Symbols: | RNA binding / nucleic acid binding /
nucleotide binding | chr3:7399162-7401870 FORWARD
Length = 603
Score = 66 bits (159), Expect = 3e-011
Identities = 54/148 (36%), Positives = 73/148 (49%), Gaps = 16/148 (10%)
Frame = +1
Query: 91 MDGYEATRIVLSRIQALDPANASKIMGLLLLQDHGEKEMIRLAFGPENLVHSVIAKAKKE 270
MD + T I+ ++I+ L+P ASKI+G LLLQD G+ +++RLA GPE L+ SV KAK
Sbjct: 1 MDPGDPTSILFTKIRTLEPDFASKIIGYLLLQDLGKTDLMRLALGPETLLQSVCLKAKSA 60
Query: 271 LGLMSCSRPLWCQEELISPKNN-GRGSSLNPASLPFYANGGGRSFTDMTNEFEFIDDVNL 447
LGL S SP N R +++ SL + G G S ++ F +L
Sbjct: 61 LGLSSNG-----SSSASSPLNPISRPINIHRHSLSHSSPGNGFSRNPLSP--SFATPGSL 113
Query: 448 GS--------VHARSGSCGLDGLGFGDS 507
GS A S DG GDS
Sbjct: 114 GSNPNMISSPFQASSSLFASDGAAAGDS 141
>TAIR9_protein||AT1G51520.1 | Symbols: | nucleic acid binding / nucleotide
binding | chr1:19106789-19108533 FORWARD
Length = 415
Score = 62 bits (148), Expect = 5e-010
Identities = 35/97 (36%), Positives = 59/97 (60%), Gaps = 5/97 (5%)
Frame = +1
Query: 91 MDGYEATRIVLSRIQALDPANASKIMGLLLLQDHGEKEMIRLAFGPENLVHSVIAKAKKE 270
MD + T I+ S+I+ + NAS+++ LLQD ++++IR+AFGP++L+ + KAK +
Sbjct: 1 MDPGDPTSIIFSKIRTFELENASRVIDYFLLQDMEQRDLIRIAFGPDSLIQTFCQKAKVD 60
Query: 271 LGLMS--CSRPLWCQEELI---SPKNNGRGSSLNPAS 366
LG S SRP+ + + SP+N S NP++
Sbjct: 61 LGFSSNGFSRPINIHGQSLSSSSPRNGFLEFSRNPSN 97
>TAIR9_protein||AT1G51520.2 | Symbols: | nucleic acid binding / nucleotide
binding | chr1:19106789-19109093 FORWARD
Length = 514
Score = 62 bits (148), Expect = 5e-010
Identities = 35/97 (36%), Positives = 59/97 (60%), Gaps = 5/97 (5%)
Frame = +1
Query: 91 MDGYEATRIVLSRIQALDPANASKIMGLLLLQDHGEKEMIRLAFGPENLVHSVIAKAKKE 270
MD + T I+ S+I+ + NAS+++ LLQD ++++IR+AFGP++L+ + KAK +
Sbjct: 1 MDPGDPTSIIFSKIRTFELENASRVIDYFLLQDMEQRDLIRIAFGPDSLIQTFCQKAKVD 60
Query: 271 LGLMS--CSRPLWCQEELI---SPKNNGRGSSLNPAS 366
LG S SRP+ + + SP+N S NP++
Sbjct: 61 LGFSSNGFSRPINIHGQSLSSSSPRNGFLEFSRNPSN 97
>TAIR9_protein||AT5G12440.1 | Symbols: | nucleic acid binding / nucleotide
binding / zinc ion binding | chr5:4035891-4038604 REVERSE
Length = 651
Score = 59 bits (142), Expect = 3e-009
Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Frame = +1
Query: 454 VHARSGSCGLDGLGFGDSELGFGGVPCSYFARGFCKNGSSCRFVHS------DGGGELVG 615
+H RS SC + GD G G PC YF+RG CKNG SC+F+H DG G +
Sbjct: 208 LHRRSFSCDASFVS-GDDGFGGGCKPCVYFSRGLCKNGESCKFIHGGYPDNMDGNGIVAD 266
Query: 616 SPSRME 633
SP +ME
Sbjct: 267 SPRKME 272
>TAIR9_protein||AT2G05160.1 | Symbols: | zinc finger (CCCH-type) family protein
/ RNA recognition motif (RRM)-containing protein | chr2:1859011-1860931
REVERSE
Length = 537
Score = 57 bits (135), Expect = 2e-008
Identities = 31/62 (50%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Frame = +1
Query: 91 MDGYEATRIVLSRIQALDPANASKIMG-LLLLQDHGEKEMIRLAFGPENLVHSVIAKAKK 267
M+ E+ +V +RIQ L+P NA+KI G LLL+Q++G ++MIRLAF P++++ SVI K
Sbjct: 1 MNFTESMNVVHARIQQLEPENAAKIFGYLLLMQENGNRDMIRLAFCPDSVMCSVINCVKY 60
Query: 268 EL 273
EL
Sbjct: 61 EL 62
>TAIR9_protein||AT3G52980.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:19645660-19646962 FORWARD
Length = 382
Score = 57 bits (135), Expect = 2e-008
Identities = 31/62 (50%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Frame = +1
Query: 91 MDGYEATRIVLSRIQALDPANASKIMG-LLLLQDHGEKEMIRLAFGPENLVHSVIAKAKK 267
M+ EA +V +RI L+P NASKI+G LLL+QD +++MIRLAF P++++ S+I K
Sbjct: 1 MNFTEAMNVVHNRIHQLEPENASKIIGYLLLMQDQNDRDMIRLAFCPDSVMRSMINCVKC 60
Query: 268 EL 273
EL
Sbjct: 61 EL 62
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,088,787,048
Number of Sequences: 33410
Number of Extensions: 4088787048
Number of Successful Extensions: 158137239
Number of sequences better than 0.0: 0
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