BLASTX 7.6.2
Query= UN06828 /QuerySize=1276
(1275 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q5ZMA3|RBM24_CHICK RNA-binding protein 24 OS=Gallus gallus GN... 119 4e-026
sp|Q76LC6|RBM24_DANRE RNA-binding protein 24 OS=Danio rerio GN=r... 118 9e-026
sp|Q9BX46|RBM24_HUMAN RNA-binding protein 24 OS=Homo sapiens GN=... 114 2e-024
sp|Q6GQD3|RB24A_XENLA RNA-binding protein 24-A OS=Xenopus laevis... 113 4e-024
sp|Q9I8B3|RB24B_XENLA RNA-binding protein 24-B OS=Xenopus laevis... 113 4e-024
sp|Q6P8A7|RBM24_XENTR RNA-binding protein 24 OS=Xenopus tropical... 113 4e-024
sp|Q5ZJX4|RBM38_CHICK RNA-binding protein 38 OS=Gallus gallus GN... 111 2e-023
sp|Q9H0Z9|RBM38_HUMAN RNA-binding protein 38 OS=Homo sapiens GN=... 110 3e-023
sp|Q62176|RBM38_MOUSE RNA-binding protein 38 OS=Mus musculus GN=... 110 3e-023
sp|Q6DIV4|RBM38_XENTR RNA-binding protein 38 OS=Xenopus tropical... 110 3e-023
sp|Q7T3I7|RBM38_XENLA RNA-binding protein 38 OS=Xenopus laevis G... 107 2e-022
sp|Q03251|GRP8_ARATH Glycine-rich RNA-binding protein 8 OS=Arabi... 87 3e-016
sp|Q05966|GRP10_BRANA Glycine-rich RNA-binding protein 10 OS=Bra... 75 9e-013
sp|Q9VVE5|MSIR6_DROME RNA-binding protein Musashi homolog Rbp6 O... 74 2e-012
sp|Q98SJ2|DAZP1_XENLA DAZ-associated protein 1 OS=Xenopus laevis... 73 4e-012
sp|Q96DH6|MSI2H_HUMAN RNA-binding protein Musashi homolog 2 OS=H... 72 6e-012
sp|Q920Q6|MSI2H_MOUSE RNA-binding protein Musashi homolog 2 OS=M... 72 6e-012
sp|P48809|RB27C_DROME Heterogeneous nuclear ribonucleoprotein 27... 72 1e-011
sp|Q99729|ROAA_HUMAN Heterogeneous nuclear ribonucleoprotein A/B... 72 1e-011
sp|Q99020|ROAA_MOUSE Heterogeneous nuclear ribonucleoprotein A/B... 71 1e-011
>sp|Q5ZMA3|RBM24_CHICK RNA-binding protein 24 OS=Gallus gallus GN=RBM24 PE=2
SV=2
Length = 225
Score = 119 bits (298), Expect = 4e-026
Identities = 77/197 (39%), Positives = 105/197 (53%), Gaps = 13/197 (6%)
Frame = -2
Query: 1085 DTTYTKVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSAT 906
DTTYTK+FVGGL + T +R+YF+ FG+I EAV+ITD+ TGKS+GYGFVT + +A
Sbjct: 7 DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66
Query: 905 RAVAEPNPVIDGRKANCNIASFG-RPRPSPP--RGRGQTGSPSQYQS--GGPSAYTGMAA 741
RA +PNP+IDGRKAN N+A G +PR P Q P+ Q G P+ Y A
Sbjct: 67 RACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQLHPALIQRPFGIPAHYVYPQA 126
Query: 740 PLPPAAAAHQLMYPSYGYTYNPDQFGYHQALYNTQLQQAQYYQQQQQLYGGGATSPSSSS 561
+ P + P+ GY A Y A Y+Q A SP++++
Sbjct: 127 FVQPGVVIPHVQ-PAAAAASTTPYIGYTGAAYAQYSAAAAAYEQYPY-----AASPAAAA 180
Query: 560 ATIMPSPYYYGYSLQAP 510
+ YGY++Q P
Sbjct: 181 GYVAAGG--YGYAVQQP 195
>sp|Q76LC6|RBM24_DANRE RNA-binding protein 24 OS=Danio rerio GN=rbm24 PE=2 SV=1
Length = 230
Score = 118 bits (295), Expect = 9e-026
Identities = 79/200 (39%), Positives = 103/200 (51%), Gaps = 14/200 (7%)
Frame = -2
Query: 1085 DTTYTKVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSAT 906
DTTYTK+FVGGL + T +R+YF+ FGEI EAV+ITD+ TGKS+GYGFVT + +A
Sbjct: 7 DTTYTKIFVGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRSAAD 66
Query: 905 RAVAEPNPVIDGRKANCNIASFG-RPRPSPPRGRGQT-GSPS------QYQSGGPSAYTG 750
RA +PNP+IDGRKAN N+A G +PR P G T G P Q G P+ Y
Sbjct: 67 RACKDPNPIIDGRKANVNLAYLGAKPRVMQP---GFTFGVPQIHPAFIQRPYGIPTHYVY 123
Query: 749 MAAPLPPAAAAHQLMYPSYGYTYNPDQFGYHQALYNTQLQQAQYYQQQQQLYGGGATSPS 570
A + P+ + + T + Y A Y A A SP
Sbjct: 124 PQAFMQPSVVIPHIQPTATSATASSPYIDYTGAAYAQYASAATAAAAAAYEQYPYAASP- 182
Query: 569 SSSATIMPSPYYYGYSLQAP 510
+AT + YGY++Q P
Sbjct: 183 --AATGYVAAAGYGYAMQQP 200
>sp|Q9BX46|RBM24_HUMAN RNA-binding protein 24 OS=Homo sapiens GN=RBM24 PE=1
SV=1
Length = 236
Score = 114 bits (283), Expect = 2e-024
Identities = 54/91 (59%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Frame = -2
Query: 1085 DTTYTKVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSAT 906
DTTYTK+FVGGL + T +R+YF+ FGEI EAV+ITD+ TGKS+GYGFVT + +A
Sbjct: 7 DTTYTKIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66
Query: 905 RAVAEPNPVIDGRKANCNIASFG-RPRPSPP 816
RA +PNP+IDGRKAN N+A G +PR P
Sbjct: 67 RACKDPNPIIDGRKANVNLAYLGAKPRIMQP 97
>sp|Q6GQD3|RB24A_XENLA RNA-binding protein 24-A OS=Xenopus laevis GN=rbm24-a
PE=2 SV=1
Length = 225
Score = 113 bits (281), Expect = 4e-024
Identities = 53/91 (58%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Frame = -2
Query: 1085 DTTYTKVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSAT 906
DTTYTK+FVGGL + T +R+YF+ FG+I EAV+ITD+ TGKS+GYGFVT + +A
Sbjct: 7 DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66
Query: 905 RAVAEPNPVIDGRKANCNIASFG-RPRPSPP 816
RA +PNP+IDGRKAN N+A G +PR P
Sbjct: 67 RACKDPNPIIDGRKANVNLAYLGAKPRIMQP 97
>sp|Q9I8B3|RB24B_XENLA RNA-binding protein 24-B OS=Xenopus laevis GN=rbm24-b
PE=2 SV=1
Length = 224
Score = 113 bits (281), Expect = 4e-024
Identities = 53/91 (58%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Frame = -2
Query: 1085 DTTYTKVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSAT 906
DTTYTK+FVGGL + T +R+YF+ FG+I EAV+ITD+ TGKS+GYGFVT + +A
Sbjct: 7 DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66
Query: 905 RAVAEPNPVIDGRKANCNIASFG-RPRPSPP 816
RA +PNP+IDGRKAN N+A G +PR P
Sbjct: 67 RACKDPNPIIDGRKANVNLAYLGAKPRIMQP 97
>sp|Q6P8A7|RBM24_XENTR RNA-binding protein 24 OS=Xenopus tropicalis GN=rbm24
PE=2 SV=1
Length = 226
Score = 113 bits (281), Expect = 4e-024
Identities = 53/91 (58%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Frame = -2
Query: 1085 DTTYTKVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSAT 906
DTTYTK+FVGGL + T +R+YF+ FG+I EAV+ITD+ TGKS+GYGFVT + +A
Sbjct: 7 DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66
Query: 905 RAVAEPNPVIDGRKANCNIASFG-RPRPSPP 816
RA +PNP+IDGRKAN N+A G +PR P
Sbjct: 67 RACKDPNPIIDGRKANVNLAYLGAKPRIMQP 97
>sp|Q5ZJX4|RBM38_CHICK RNA-binding protein 38 OS=Gallus gallus GN=RBM38 PE=2
SV=1
Length = 215
Score = 111 bits (275), Expect = 2e-023
Identities = 51/87 (58%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
Frame = -2
Query: 1085 DTTYTKVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSAT 906
DTT+TK+FVGGL + T +R+YF+ FG+I EAV+ITD+ TGKS+GYGFVT + +A
Sbjct: 7 DTTFTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66
Query: 905 RAVAEPNPVIDGRKANCNIASFG-RPR 828
RA +PNP+IDGRKAN N+A G +PR
Sbjct: 67 RACKDPNPIIDGRKANVNLAYLGAKPR 93
>sp|Q9H0Z9|RBM38_HUMAN RNA-binding protein 38 OS=Homo sapiens GN=RBM38 PE=1
SV=2
Length = 239
Score = 110 bits (274), Expect = 3e-023
Identities = 51/87 (58%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
Frame = -2
Query: 1085 DTTYTKVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSAT 906
DTT+TK+FVGGL + T +R+YF+ FG+I EAV+ITD+ TGKS+GYGFVT + +A
Sbjct: 30 DTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 89
Query: 905 RAVAEPNPVIDGRKANCNIASFG-RPR 828
RA +PNP+IDGRKAN N+A G +PR
Sbjct: 90 RACKDPNPIIDGRKANVNLAYLGAKPR 116
>sp|Q62176|RBM38_MOUSE RNA-binding protein 38 OS=Mus musculus GN=Rbm38 PE=2
SV=2
Length = 237
Score = 110 bits (274), Expect = 3e-023
Identities = 51/87 (58%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
Frame = -2
Query: 1085 DTTYTKVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSAT 906
DTT+TK+FVGGL + T +R+YF+ FG+I EAV+ITD+ TGKS+GYGFVT + +A
Sbjct: 28 DTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAD 87
Query: 905 RAVAEPNPVIDGRKANCNIASFG-RPR 828
RA +PNP+IDGRKAN N+A G +PR
Sbjct: 88 RACKDPNPIIDGRKANVNLAYLGAKPR 114
>sp|Q6DIV4|RBM38_XENTR RNA-binding protein 38 OS=Xenopus tropicalis GN=rbm38
PE=2 SV=1
Length = 219
Score = 110 bits (273), Expect = 3e-023
Identities = 51/87 (58%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
Frame = -2
Query: 1085 DTTYTKVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSAT 906
DTT+TK+FVGGL + T +R+YF+ FG+I EAV+ITD+ TGKS+GYGFVT + +A
Sbjct: 7 DTTFTKIFVGGLPYHTTDASLRKYFEVFGDIDEAVVITDRQTGKSRGYGFVTMSDRAAAE 66
Query: 905 RAVAEPNPVIDGRKANCNIASFG-RPR 828
RA +PNP+IDGRKAN N+A G +PR
Sbjct: 67 RACKDPNPIIDGRKANVNLAYLGAKPR 93
>sp|Q7T3I7|RBM38_XENLA RNA-binding protein 38 OS=Xenopus laevis GN=rbm38 PE=1
SV=2
Length = 214
Score = 107 bits (267), Expect = 2e-022
Identities = 50/87 (57%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Frame = -2
Query: 1085 DTTYTKVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSAT 906
DTT+TK+FVGGL + T +R+YF+ FG+I EAV+ITD+ T KS+GYGFVT + +A
Sbjct: 7 DTTFTKIFVGGLPYHTTDASLRKYFEVFGDIDEAVVITDRQTAKSRGYGFVTMSDRAAAE 66
Query: 905 RAVAEPNPVIDGRKANCNIASFG-RPR 828
RA +PNP+IDGRKAN N+A G +PR
Sbjct: 67 RACKDPNPIIDGRKANVNLAYLGAKPR 93
>sp|Q03251|GRP8_ARATH Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana
GN=GRP8 PE=1 SV=1
Length = 169
Score = 87 bits (213), Expect = 3e-016
Identities = 45/108 (41%), Positives = 68/108 (62%), Gaps = 4/108 (3%)
Frame = -2
Query: 1070 KVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSATRAVAE 891
+ FVGGLAW T E+++R F QFG+++++ II D+ +G+S+G+GFVTF++ + A+ E
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 890 PN-PVIDGRKANCNIASFGRPRPSPPRGRGQTGSPSQYQSGGPSAYTG 750
N +DGR N A + R S G G+ GS Y+SGG Y+G
Sbjct: 67 MNGKELDGRVITVNEA---QSRGSGGGGGGRGGSGGGYRSGGGGGYSG 111
>sp|Q05966|GRP10_BRANA Glycine-rich RNA-binding protein 10 OS=Brassica napus
GN=GRP10 PE=2 SV=1
Length = 169
Score = 75 bits (183), Expect = 9e-013
Identities = 42/102 (41%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Frame = -2
Query: 1070 KVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSATRAVAE 891
+ FVGGLAW T E+ R F QFGE++++ II D+ TG+S+G+GFVTF++ S A+ E
Sbjct: 7 RCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDE 66
Query: 890 PN-PVIDGRKANCNIASFGRPRPSPPRGRGQTGSPSQYQSGG 768
N +DGR N A RG G G GG
Sbjct: 67 MNGKELDGRTITVNEAQSRGGGGGGGRGGGGYGGRGGGGYGG 108
>sp|Q9VVE5|MSIR6_DROME RNA-binding protein Musashi homolog Rbp6 OS=Drosophila
melanogaster GN=Rbp6 PE=1 SV=3
Length = 369
Score = 74 bits (181), Expect = 2e-012
Identities = 31/82 (37%), Positives = 54/82 (65%)
Frame = -2
Query: 1070 KVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSATRAVAE 891
K+F+GGL+W+T E +R YF ++G+I EA+++ D T +S+G+GFVTF + +S + + +
Sbjct: 30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 89
Query: 890 PNPVIDGRKANCNIASFGRPRP 825
+DG+K + +A R P
Sbjct: 90 GTHELDGKKVDPKVAFPRRAHP 111
>sp|Q98SJ2|DAZP1_XENLA DAZ-associated protein 1 OS=Xenopus laevis GN=dazap1 PE=1
SV=1
Length = 360
Score = 73 bits (177), Expect = 4e-012
Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Frame = -2
Query: 1070 KVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSATRAVAE 891
K+FVGGL W T E +R YF Q+GE+++ VI+ DK T +S+G+GFV F++ + +A
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 890 PNPVIDGRKAN---CNIASFGRPRPSPPRGRGQTGSPSQYQSGGPSAYTG 750
+DGR + C +P S PR Q P S + G
Sbjct: 71 RPHTLDGRNIDPKPCTPRGM-QPERSRPREGWQQKEPRTENSRSNKIFVG 119
>sp|Q96DH6|MSI2H_HUMAN RNA-binding protein Musashi homolog 2 OS=Homo sapiens
GN=MSI2 PE=1 SV=1
Length = 328
Score = 72 bits (176), Expect = 6e-012
Identities = 30/82 (36%), Positives = 53/82 (64%)
Frame = -2
Query: 1070 KVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSATRAVAE 891
K+F+GGL+W+T + +R YF +FGEI E +++ D T +S+G+GFVTF + S + + +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 890 PNPVIDGRKANCNIASFGRPRP 825
P+ +D + + +A R +P
Sbjct: 82 PHHELDSKTIDPKVAFPRRAQP 103
>sp|Q920Q6|MSI2H_MOUSE RNA-binding protein Musashi homolog 2 OS=Mus musculus
GN=Msi2 PE=1 SV=1
Length = 346
Score = 72 bits (176), Expect = 6e-012
Identities = 30/82 (36%), Positives = 53/82 (64%)
Frame = -2
Query: 1070 KVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSATRAVAE 891
K+F+GGL+W+T + +R YF +FGEI E +++ D T +S+G+GFVTF + S + + +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 890 PNPVIDGRKANCNIASFGRPRP 825
P+ +D + + +A R +P
Sbjct: 82 PHHELDSKTIDPKVAFPRRAQP 103
>sp|P48809|RB27C_DROME Heterogeneous nuclear ribonucleoprotein 27C OS=Drosophila
melanogaster GN=Hrb27C PE=1 SV=2
Length = 421
Score = 72 bits (174), Expect = 1e-011
Identities = 31/84 (36%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Frame = -2
Query: 1070 KVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSATRAVAE 891
K+FVGGL+WET E + RYF +FG+I++ V++ + +G+S+G+GFVTF + + +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 890 PNPVIDGRKAN---CNIASFGRPR 828
+DGR + CN + +P+
Sbjct: 68 GPHTLDGRTIDPKPCNPRTLQKPK 91
>sp|Q99729|ROAA_HUMAN Heterogeneous nuclear ribonucleoprotein A/B OS=Homo
sapiens GN=HNRNPAB PE=1 SV=2
Length = 332
Score = 72 bits (174), Expect = 1e-011
Identities = 28/68 (41%), Positives = 49/68 (72%)
Frame = -2
Query: 1070 KVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSATRAVAE 891
K+FVGGL+W+T ++++ YF +FGE+++ I D NTG+S+G+GF+ F++A S + + +
Sbjct: 70 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 129
Query: 890 PNPVIDGR 867
+DGR
Sbjct: 130 KEHRLDGR 137
>sp|Q99020|ROAA_MOUSE Heterogeneous nuclear ribonucleoprotein A/B OS=Mus
musculus GN=Hnrnpab PE=1 SV=1
Length = 285
Score = 71 bits (173), Expect = 1e-011
Identities = 27/68 (39%), Positives = 49/68 (72%)
Frame = -2
Query: 1070 KVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSATRAVAE 891
K+FVGGL+W+T ++++ YF +FGE+++ I D NTG+S+G+GF+ F+++ S + + +
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 890 PNPVIDGR 867
+DGR
Sbjct: 136 KEHRLDGR 143
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,142,735,057
Number of Sequences: 518415
Number of Extensions: 27142735057
Number of Successful Extensions: 186959540
Number of sequences better than 0.0: 0
|
