BLASTX 7.6.2
Query= UN06828 /QuerySize=1276
(1275 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G78260.1 | Symbols: | RNA recognition motif (... 538 4e-153
TAIR9_protein||AT1G78260.2 | Symbols: | RNA recognition motif (... 493 2e-139
TAIR9_protein||AT1G22330.1 | Symbols: | RNA binding / nucleic a... 385 5e-107
TAIR9_protein||AT2G46780.1 | Symbols: | RNA binding / nucleic a... 158 9e-039
TAIR9_protein||AT1G20880.1 | Symbols: | RNA recognition motif (... 158 1e-038
TAIR9_protein||AT1G22910.1 | Symbols: | RNA recognition motif (... 158 1e-038
TAIR9_protein||AT1G22910.2 | Symbols: | RNA recognition motif (... 157 2e-038
TAIR9_protein||AT1G76460.1 | Symbols: | RNA recognition motif (... 157 2e-038
TAIR9_protein||AT1G22910.3 | Symbols: | RNA recognition motif (... 157 2e-038
TAIR9_protein||AT1G33470.1 | Symbols: | RNA recognition motif (... 140 2e-033
TAIR9_protein||AT1G33470.2 | Symbols: | RNA recognition motif (... 140 3e-033
TAIR9_protein||AT3G54770.1 | Symbols: | RNA recognition motif (... 119 5e-027
TAIR9_protein||AT5G11412.1 | Symbols: | nucleic acid binding / ... 116 3e-026
TAIR9_protein||AT3G06970.1 | Symbols: | RNA binding / nucleic a... 106 5e-023
TAIR9_protein||AT5G53680.1 | Symbols: | RNA recognition motif (... 103 4e-022
TAIR9_protein||AT5G53720.1 | Symbols: | RNA recognition motif (... 93 4e-019
TAIR9_protein||AT3G54770.2 | Symbols: | RNA recognition motif (... 87 2e-017
TAIR9_protein||AT3G15010.1 | Symbols: | RNA recognition motif (... 82 8e-016
TAIR9_protein||AT3G15010.2 | Symbols: | RNA recognition motif (... 82 8e-016
TAIR9_protein||AT3G56860.3 | Symbols: UBA2A | UBP1 interacting p... 77 2e-014
>TAIR9_protein||AT1G78260.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:29447317-29450181 FORWARD
Length = 288
Score = 538 bits (1384), Expect = 4e-153
Identities = 266/289 (92%), Positives = 273/289 (94%), Gaps = 5/289 (1%)
Frame = -2
Query: 1121 MSQTSYYRSPFGDTTYTKVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGY 942
MSQTSYYRSPFGDTTYTKVFVGGLAWETPT+EMRRYF+QFGEILEAVIITDKNTGKSKGY
Sbjct: 1 MSQTSYYRSPFGDTTYTKVFVGGLAWETPTDEMRRYFEQFGEILEAVIITDKNTGKSKGY 60
Query: 941 GFVTFREADSATRAVAEPNPVIDGRKANCNIASFGRPRPSPPRGRGQTGSPSQYQSGGPS 762
GFVTFRE+DSATRAVA+PNPVIDGRKANCNIASFGRPRPSPPRGRGQTGSPSQYQSGGPS
Sbjct: 61 GFVTFRESDSATRAVADPNPVIDGRKANCNIASFGRPRPSPPRGRGQTGSPSQYQSGGPS 120
Query: 761 AYTGMAAPLPPAAAAHQLMYPSYGYTYNPDQFGYHQALYNTQLQQAQYYQQQQQLYGGGA 582
YTGMAAPLPPAAA QLMYPSYGYTYNPDQFGYHQALYNTQLQQAQYYQQQQQLYGGGA
Sbjct: 121 TYTGMAAPLPPAAAP-QLMYPSYGYTYNPDQFGYHQALYNTQLQQAQYYQQQQQLYGGGA 179
Query: 581 TSPSSSSATIMPSPYYYGYSLQAPRMPYQ-HHHLPQPYNPQQHHHQRFTSP-FFVYPSNS 408
TSPSSS ATIMPSPYYYGYSLQAPR+PYQ HHHLPQPYNPQQHHHQRF+SP F VYPSNS
Sbjct: 180 TSPSSSGATIMPSPYYYGYSLQAPRVPYQHHHHLPQPYNPQQHHHQRFSSPSFLVYPSNS 239
Query: 407 SFAPPLQGPHSSFTESEA-PEQVP-GEGEATTAAPEITTSNYKEPISS* 267
SFAPPLQG SS TESEA P+QVP EGEATT APEITTSN KEPISS*
Sbjct: 240 SFAPPLQGVLSSSTESEAVPQQVPAAEGEATTTAPEITTSNTKEPISS* 288
>TAIR9_protein||AT1G78260.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:29447317-29449246 FORWARD
Length = 272
Score = 493 bits (1267), Expect = 2e-139
Identities = 238/254 (93%), Positives = 244/254 (96%), Gaps = 3/254 (1%)
Frame = -2
Query: 1121 MSQTSYYRSPFGDTTYTKVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGY 942
MSQTSYYRSPFGDTTYTKVFVGGLAWETPT+EMRRYF+QFGEILEAVIITDKNTGKSKGY
Sbjct: 1 MSQTSYYRSPFGDTTYTKVFVGGLAWETPTDEMRRYFEQFGEILEAVIITDKNTGKSKGY 60
Query: 941 GFVTFREADSATRAVAEPNPVIDGRKANCNIASFGRPRPSPPRGRGQTGSPSQYQSGGPS 762
GFVTFRE+DSATRAVA+PNPVIDGRKANCNIASFGRPRPSPPRGRGQTGSPSQYQSGGPS
Sbjct: 61 GFVTFRESDSATRAVADPNPVIDGRKANCNIASFGRPRPSPPRGRGQTGSPSQYQSGGPS 120
Query: 761 AYTGMAAPLPPAAAAHQLMYPSYGYTYNPDQFGYHQALYNTQLQQAQYYQQQQQLYGGGA 582
YTGMAAPLPPAAA QLMYPSYGYTYNPDQFGYHQALYNTQLQQAQYYQQQQQLYGGGA
Sbjct: 121 TYTGMAAPLPPAAAP-QLMYPSYGYTYNPDQFGYHQALYNTQLQQAQYYQQQQQLYGGGA 179
Query: 581 TSPSSSSATIMPSPYYYGYSLQAPRMPYQ-HHHLPQPYNPQQHHHQRFTSP-FFVYPSNS 408
TSPSSS ATIMPSPYYYGYSLQAPR+PYQ HHHLPQPYNPQQHHHQRF+SP F VYPSNS
Sbjct: 180 TSPSSSGATIMPSPYYYGYSLQAPRVPYQHHHHLPQPYNPQQHHHQRFSSPSFLVYPSNS 239
Query: 407 SFAPPLQGPHSSFT 366
SFAPPLQG SS T
Sbjct: 240 SFAPPLQGVLSSST 253
>TAIR9_protein||AT1G22330.1 | Symbols: | RNA binding / nucleic acid binding /
nucleotide binding | chr1:7886693-7889241 FORWARD
Length = 292
Score = 385 bits (987), Expect = 5e-107
Identities = 214/302 (70%), Positives = 231/302 (76%), Gaps = 30/302 (9%)
Frame = -2
Query: 1121 MSQTSYYRSPFGDTTYTKVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGY 942
MS TSYYRSPFGDTT+TKVFVGGLAWETPT+EMRRYFDQFGEILEAVIITDK TGKSKGY
Sbjct: 1 MSNTSYYRSPFGDTTHTKVFVGGLAWETPTDEMRRYFDQFGEILEAVIITDKATGKSKGY 60
Query: 941 GFVTFREADSATRAVAEPNPVIDGRKANCNIASFGRPRPSPPRGRGQTGSPSQYQSGGPS 762
GFVTFR++DSATRAVA+PNPVIDGRKANCNIASFGRPRPS PRGRGQ GSPSQYQ GG S
Sbjct: 61 GFVTFRDSDSATRAVADPNPVIDGRKANCNIASFGRPRPSTPRGRGQGGSPSQYQGGGQS 120
Query: 761 AYTGMAAPLPPAAAAHQLMYPSYGYTYNPDQFGYHQALYNTQLQQAQYYQQQQQLYGGGA 582
+YTGMAAP+ AAAA QLMYPSYGYTYN ++GYHQALYN QLQQAQYY QQQ GGGA
Sbjct: 121 SYTGMAAPVQQAAAA-QLMYPSYGYTYN-SEYGYHQALYNAQLQQAQYY-QQQMYGGGGA 177
Query: 581 TSPSSSSATIMPSPYYYGYSLQAPR-MPYQHHHLPQPYNPQQHHHQR----------FTS 435
TSPSSS+ IMPSPYYY LQAP PY HH Q Y Q HHHQ+ S
Sbjct: 178 TSPSSSN--IMPSPYYY---LQAPSPRPYLHHQ--QHY--QYHHHQQQQQQQQQRLPSAS 228
Query: 434 PFFVYPSN-----SSFAPPLQGPHSSFTESEAPEQVPGEGEA--TTAAPEITTSNYKEPI 276
+ +YPSN S P QGP SS TES AP+QV EG T APE TT+N ++
Sbjct: 229 SYLIYPSNVEAPTPSNVPTSQGPLSSSTESHAPQQVSEEGGEFDPTDAPESTTTNIRDLT 288
Query: 275 SS 270
SS
Sbjct: 289 SS 290
>TAIR9_protein||AT2G46780.1 | Symbols: | RNA binding / nucleic acid binding /
nucleotide binding | chr2:19229516-19231043 FORWARD
Length = 337
Score = 158 bits (398), Expect = 9e-039
Identities = 106/274 (38%), Positives = 139/274 (50%), Gaps = 47/274 (17%)
Frame = -2
Query: 1085 DTTYTKVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSAT 906
DT TK+FVGGLAWET + MRRYF+QFGEI+EAV+ITDKNTG+SKGYGFVTF+EA++A
Sbjct: 18 DTKLTKIFVGGLAWETQRDTMRRYFEQFGEIVEAVVITDKNTGRSKGYGFVTFKEAEAAM 77
Query: 905 RAVAEPNPVIDGRKANCNIASFGRPRPSPPRG-RGQTGSPSQYQSGGPSAYTGMAAPLP- 732
RA NPVIDGR+ANCN+A G +P PP R TG +++S P + G+ AP P
Sbjct: 78 RACQNMNPVIDGRRANCNLACLGAQKPRPPTSPRHGTG---RFRS--PGSGVGLVAPSPQ 132
Query: 731 ------PAAAAHQ----------LMYPSYGYTYNPDQFGYHQALYNTQLQQAQYYQQQQQ 600
+A HQ Y +YG++ GY Q + YY
Sbjct: 133 FRGSSSSSAFVHQQQQQHTAQFPFPYSTYGFS------GYSQ----EGMYPMNYY--NHH 180
Query: 599 LYGGGATSPSSSSATIMPSPYYYGYSLQAPRMPYQHHHLPQPYNPQQHHHQRFTSPFFVY 420
LYGG SP + + ++G+ P+ Q HHQ F+ +
Sbjct: 181 LYGGQQFSPYMGHPSAGSTGMFHGFYPYYPQYNAAQSSNQAQAQVQAQHHQGFSFQYTAP 240
Query: 419 PSNSSFAPPL-------QGPHSSFTESEAPEQVP 339
P APPL PH S + + +Q P
Sbjct: 241 P-----APPLLQYPYLPHQPHFSSQQQFSSQQPP 269
>TAIR9_protein||AT1G20880.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:7262879-7264834 REVERSE
Length = 275
Score = 158 bits (397), Expect = 1e-038
Identities = 73/114 (64%), Positives = 89/114 (78%), Gaps = 5/114 (4%)
Frame = -2
Query: 1106 YYRSPFGDTTYTKVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTF 927
Y SPFGDTT+TKVFVGGLAWET +E +RR+FDQ+G+ILEAV+ITDKNTG+SKGYGFVTF
Sbjct: 13 YLNSPFGDTTFTKVFVGGLAWETQSETLRRHFDQYGDILEAVVITDKNTGRSKGYGFVTF 72
Query: 926 READSATRAVAEPNPVIDGRKANCNIASFGRPRPSP-----PRGRGQTGSPSQY 780
R+ ++A RA +P P+IDGR+ANCN+AS GR RP P G+ PS Y
Sbjct: 73 RDPEAARRACVDPTPIIDGRRANCNLASLGRSRPPMQYAVIPHAPGRVRPPSPY 126
>TAIR9_protein||AT1G22910.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:8105808-8107659 FORWARD
Length = 250
Score = 158 bits (397), Expect = 1e-038
Identities = 100/241 (41%), Positives = 134/241 (55%), Gaps = 22/241 (9%)
Frame = -2
Query: 1088 GDTTYTKVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSA 909
GDTTYTKVFVGGLAWET E M+++F+QFGEILEAV+ITDK +G+SKGYGFVTFREA++A
Sbjct: 8 GDTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAA 67
Query: 908 TRAVAEPNPVIDGRKANCNIASFG--RPRPSPPRGRGQTGSPSQYQSGGPSAYTGMAAPL 735
A + PVIDGR+ANCN+AS G R +PS P G G + + + TG P
Sbjct: 68 RSACVDATPVIDGRRANCNLASLGLQRSKPSTP-NHGGGGRINNMRVMMSTMQTGFGPPP 126
Query: 734 PPAAAAH----QLMYPSYGYT-YNPDQFGYHQALYNTQ--LQQAQYYQQQQQLYGGGATS 576
PP L +GY+ Y+PD + LY QY + GGG +
Sbjct: 127 PPQPPTFTHYPHLPLNLFGYSPYSPDYSSFPTNLYGMYGCTSGGQYGVYGNRNSGGGGLT 186
Query: 575 PSSSSATIMPSPYY-----YGYSLQAPRMPYQHH---HLPQPYNPQQHHHQRFTSPFFVY 420
+++SAT P+Y +G + P+ HH + P Y+P Q+ + F +
Sbjct: 187 AAAASAT----PFYPCGGGHGGVQFSQPQPFYHHLSSYNPHHYSPPTFSMQQGVTGFPLQ 242
Query: 419 P 417
P
Sbjct: 243 P 243
>TAIR9_protein||AT1G22910.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:8105808-8107618 FORWARD
Length = 243
Score = 157 bits (395), Expect = 2e-038
Identities = 99/227 (43%), Positives = 129/227 (56%), Gaps = 23/227 (10%)
Frame = -2
Query: 1088 GDTTYTKVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSA 909
GDTTYTKVFVGGLAWET E M+++F+QFGEILEAV+ITDK +G+SKGYGFVTFREA++A
Sbjct: 8 GDTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAA 67
Query: 908 TRAVAEPNPVIDGRKANCNIASFG--RPRPSPPRGRGQTGSPSQYQSGGPSAYTGMAAPL 735
A + PVIDGR+ANCN+AS G R +PS P G G + + + TG P
Sbjct: 68 RSACVDATPVIDGRRANCNLASLGLQRSKPSTP-NHGGGGRINNMRVMMSTMQTGFGPPP 126
Query: 734 PPAAAAH----QLMYPSYGYT-YNPDQFGYHQALYNTQ--LQQAQYYQQQQQLYGGGATS 576
PP L +GY+ Y+PD + LY QY + GGG +
Sbjct: 127 PPQPPTFTHYPHLPLNLFGYSPYSPDYSSFPTNLYGMYGCTSGGQYGVYGNRNSGGGGLT 186
Query: 575 PSSSSATIMPSPYY-----YGYSLQAPRMPYQHHHLPQPYNPQQHHH 450
+++SAT P+Y +G + P+ HH YNP HH+
Sbjct: 187 AAAASAT----PFYPCGGGHGGVQFSQPQPFYHH--LSSYNP--HHY 225
>TAIR9_protein||AT1G76460.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:28686932-28688506 REVERSE
Length = 286
Score = 157 bits (395), Expect = 2e-038
Identities = 69/97 (71%), Positives = 85/97 (87%)
Frame = -2
Query: 1106 YYRSPFGDTTYTKVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTF 927
Y SPFGDTT+TKVFVGGLAWET +E +R++F+Q+GEILEAV+I DKNTG+SKGYGFVTF
Sbjct: 13 YLNSPFGDTTFTKVFVGGLAWETQSETLRQHFEQYGEILEAVVIADKNTGRSKGYGFVTF 72
Query: 926 READSATRAVAEPNPVIDGRKANCNIASFGRPRPSPP 816
R+ ++A RA A+P P+IDGR+ANCN+AS GRPRP P
Sbjct: 73 RDPEAARRACADPTPIIDGRRANCNLASLGRPRPPLP 109
>TAIR9_protein||AT1G22910.3 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:8105808-8107949 FORWARD
Length = 348
Score = 157 bits (395), Expect = 2e-038
Identities = 99/227 (43%), Positives = 129/227 (56%), Gaps = 23/227 (10%)
Frame = -2
Query: 1088 GDTTYTKVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSA 909
GDTTYTKVFVGGLAWET E M+++F+QFGEILEAV+ITDK +G+SKGYGFVTFREA++A
Sbjct: 8 GDTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAA 67
Query: 908 TRAVAEPNPVIDGRKANCNIASFG--RPRPSPPRGRGQTGSPSQYQSGGPSAYTGMAAPL 735
A + PVIDGR+ANCN+AS G R +PS P G G + + + TG P
Sbjct: 68 RSACVDATPVIDGRRANCNLASLGLQRSKPSTP-NHGGGGRINNMRVMMSTMQTGFGPPP 126
Query: 734 PPAAAAH----QLMYPSYGYT-YNPDQFGYHQALYNTQ--LQQAQYYQQQQQLYGGGATS 576
PP L +GY+ Y+PD + LY QY + GGG +
Sbjct: 127 PPQPPTFTHYPHLPLNLFGYSPYSPDYSSFPTNLYGMYGCTSGGQYGVYGNRNSGGGGLT 186
Query: 575 PSSSSATIMPSPYY-----YGYSLQAPRMPYQHHHLPQPYNPQQHHH 450
+++SAT P+Y +G + P+ HH YNP HH+
Sbjct: 187 AAAASAT----PFYPCGGGHGGVQFSQPQPFYHH--LSSYNP--HHY 225
>TAIR9_protein||AT1G33470.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:12144632-12146040 FORWARD
Length = 246
Score = 140 bits (352), Expect = 2e-033
Identities = 88/216 (40%), Positives = 120/216 (55%), Gaps = 26/216 (12%)
Frame = -2
Query: 1085 DTTYTKVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSAT 906
DTT+TKVFVGGLAWET +R YF+QFG+I+EAV+ITDK++G+SKGYGFVTF + ++A
Sbjct: 3 DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 62
Query: 905 RAVAEPNPVIDGRKANCNIASFG--RPRPSPP-----RGRGQTGSPSQYQSGGPSAYTGM 747
+A +P PVIDGR+ANCN+A+FG R +PS P GRG + S +++ +A T +
Sbjct: 63 KACVDPAPVIDGRRANCNLAAFGVQRSKPSSPIHGHVGGRGMKVT-SPFKTHFGTAATAI 121
Query: 746 AAPLPPAAAAHQLMYPSYGYTY-NPDQFGYHQALYNTQLQQAQYYQ------QQQQLYGG 588
+PLP + Y Y NP F + YN Q YY Q +YG
Sbjct: 122 PSPLP---------FSHYTLPYTNPFGFSSYSMDYNYPTQ--SYYNVYGGATAQHPMYGS 170
Query: 587 GATSPSSSSATIMPSPYYYGYSLQAPRMPYQHHHLP 480
G + +++ PY P Y H P
Sbjct: 171 GPMTGVAAAPAAGFYPYLQFAEGNGPVTGYAPLHYP 206
>TAIR9_protein||AT1G33470.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:12144632-12146040 FORWARD
Length = 245
Score = 140 bits (351), Expect = 3e-033
Identities = 86/213 (40%), Positives = 118/213 (55%), Gaps = 21/213 (9%)
Frame = -2
Query: 1085 DTTYTKVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSAT 906
DTT+TKVFVGGLAWET +R YF+QFG+I+EAV+ITDK++G+SKGYGFVTF + ++A
Sbjct: 3 DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 62
Query: 905 RAVAEPNPVIDGRKANCNIASFG--RPRPSPP-----RGRGQTGSPSQYQSGGPSAYTGM 747
+A +P PVIDGR+ANCN+A+FG R +PS P GRG + S +++ +A T +
Sbjct: 63 KACVDPAPVIDGRRANCNLAAFGVQRSKPSSPIHGHVGGRGMKVT-SPFKTHFGTAATAI 121
Query: 746 AAPLPPAAAAHQLMYPSYGYTY-NPDQFGYHQALYNTQLQQAQYY---QQQQQLYGGGAT 579
+PLP + Y Y NP F + YN Y Q +YG G
Sbjct: 122 PSPLP---------FSHYTLPYTNPFGFSSYSMDYNYPTSYYNVYGGATAQHPMYGSGPM 172
Query: 578 SPSSSSATIMPSPYYYGYSLQAPRMPYQHHHLP 480
+ +++ PY P Y H P
Sbjct: 173 TGVAAAPAAGFYPYLQFAEGNGPVTGYAPLHYP 205
>TAIR9_protein||AT3G54770.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:20273863-20275827 REVERSE
Length = 262
Score = 119 bits (297), Expect = 5e-027
Identities = 61/110 (55%), Positives = 79/110 (71%), Gaps = 1/110 (0%)
Frame = -2
Query: 1121 MSQTSYYRSPFGDTTYTKVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGY 942
M+ ++ FGDT TKVFVGGLAW+T E M +F ++G+ILEAVII+DK T +SKGY
Sbjct: 1 MTTSNNVNGCFGDTKLTKVFVGGLAWDTHKEAMYDHFIKYGDILEAVIISDKLTRRSKGY 60
Query: 941 GFVTFREADSATRAVAEPNPVIDGRKANCNIASF-GRPRPSPPRGRGQTG 795
GFVTF++A +ATRA + P+I+GR+ANCN+AS GR R SP Q G
Sbjct: 61 GFVTFKDAKAATRACEDSTPIINGRRANCNLASLGGRLRKSPTMTSPQQG 110
>TAIR9_protein||AT5G11412.1 | Symbols: | nucleic acid binding / nucleotide
binding | chr5:3640349-3640876 REVERSE
Length = 176
Score = 116 bits (290), Expect = 3e-026
Identities = 51/90 (56%), Positives = 68/90 (75%)
Frame = -2
Query: 1106 YYRSPFGDTTYTKVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTF 927
+Y + DT YTK++VGGL WET E +R YF+QFG+I+ ++ D+ TG+S+GYGFVTF
Sbjct: 41 HYANENVDTRYTKIYVGGLPWETRNEGLRSYFEQFGDIIHVNMVCDRETGRSEGYGFVTF 100
Query: 926 READSATRAVAEPNPVIDGRKANCNIASFG 837
R+A+SATRA P PVIDGR+A CN+A G
Sbjct: 101 RDAESATRACQNPKPVIDGREAKCNLAYIG 130
>TAIR9_protein||AT3G06970.1 | Symbols: | RNA binding / nucleic acid binding /
nucleotide binding | chr3:2199653-2201150 REVERSE
Length = 318
Score = 106 bits (262), Expect = 5e-023
Identities = 58/152 (38%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Frame = -2
Query: 1085 DTTYTKVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSAT 906
DT TK+FVG L W T +++RRYF+QFG++++A ++++ G+SKGYGF+TFR+ S
Sbjct: 8 DTRVTKIFVGNLTWRTTADDLRRYFEQFGQVVDANVVSETYPGRSKGYGFITFRDYVSTV 67
Query: 905 RAVAEPNPVIDGRKANCNIASFG-RPRPSPPRGRGQTG---SPSQYQSGGPSAYTGMAAP 738
RA+ P+IDGR NCN+AS G + + P G P QYQ A +
Sbjct: 68 RALQNSKPIIDGRTTNCNLASAGAKQNMNHPNLNGSFNYVIPPHQYQ----QAPQHVIPY 123
Query: 737 LPPAAAAHQLMYPSYGYTYNPDQFGYHQALYN 642
PP H Y Y NP + Q ++N
Sbjct: 124 CPPHTWNHVWGQYIYMYNNNPCYYYPTQMIHN 155
>TAIR9_protein||AT5G53680.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:21798382-21799109 FORWARD
Length = 170
Score = 103 bits (255), Expect = 4e-022
Identities = 46/93 (49%), Positives = 65/93 (69%), Gaps = 3/93 (3%)
Frame = -2
Query: 1085 DTTYTKVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSAT 906
DTT+TK++VGGL W T E + +F +FGEI+ ++ D+ T +S+GYGFVTF++A+SAT
Sbjct: 9 DTTFTKIYVGGLPWTTRKEGLINFFKRFGEIIHVNVVCDRETDRSQGYGFVTFKDAESAT 68
Query: 905 RAVAEPNPVIDGRKANCNIASFG---RPRPSPP 816
RA +PNP I+GR NC +A G +P S P
Sbjct: 69 RACKDPNPTIEGRITNCKLAFVGAKVKPNQSQP 101
>TAIR9_protein||AT5G53720.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:21806622-21807012 FORWARD
Length = 101
Score = 93 bits (229), Expect = 4e-019
Identities = 43/79 (54%), Positives = 55/79 (69%)
Frame = -2
Query: 1073 TKVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSATRAVA 894
TK++V GL W T TE + YF++FGEI+ A ++ D T +SKG+GFVTFRE +SATRA
Sbjct: 9 TKIYVAGLPWITRTEGLISYFERFGEIVYAKVVCDGATQRSKGFGFVTFREVESATRACE 68
Query: 893 EPNPVIDGRKANCNIASFG 837
PN IDGR NC +A G
Sbjct: 69 NPNHTIDGRTVNCKLAYLG 87
>TAIR9_protein||AT3G54770.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:20273863-20275731 REVERSE
Length = 219
Score = 87 bits (214), Expect = 2e-017
Identities = 59/147 (40%), Positives = 81/147 (55%), Gaps = 13/147 (8%)
Frame = -2
Query: 1025 MRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSATRAVAEPNPVIDGRKANCNIA 846
M +F ++G+ILEAVII+DK T +SKGYGFVTF++A +ATRA + P+I+GR+ANCN+A
Sbjct: 1 MYDHFIKYGDILEAVIISDKLTRRSKGYGFVTFKDAKAATRACEDSTPIINGRRANCNLA 60
Query: 845 SFG---RPRPSPPRGRGQTGSPSQYQSGGPSAYTGMAAPLPPAAAAHQLMYPSYGY--TY 681
S G RP+ G+ SQ+ PS +T HQ + P YGY Y
Sbjct: 61 SLGGRLRPKNGNRATPPHVGNHSQWYY--PSGFTNQ----QHQQQNHQAV-PFYGYPSAY 113
Query: 680 NPDQFGYHQAL-YNTQLQQAQYYQQQQ 603
++Q + Y YY Q Q
Sbjct: 114 VAPNMTFNQKVGYVGGTYMNGYYAQMQ 140
>TAIR9_protein||AT3G15010.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:5052844-5054058 FORWARD
Length = 405
Score = 82 bits (200), Expect = 8e-016
Identities = 40/83 (48%), Positives = 54/83 (65%)
Frame = -2
Query: 1085 DTTYTKVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSAT 906
D + K+F+ GLA +T TE +R F +G++ EA++I DK TGKSKGYGFVTF D A
Sbjct: 71 DISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGFVTFMHVDGAL 130
Query: 905 RAVAEPNPVIDGRKANCNIASFG 837
A+ EP+ IDGR +A+ G
Sbjct: 131 LALKEPSKKIDGRVTVTQLAASG 153
>TAIR9_protein||AT3G15010.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:5052844-5054058 FORWARD
Length = 405
Score = 82 bits (200), Expect = 8e-016
Identities = 40/83 (48%), Positives = 54/83 (65%)
Frame = -2
Query: 1085 DTTYTKVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSAT 906
D + K+F+ GLA +T TE +R F +G++ EA++I DK TGKSKGYGFVTF D A
Sbjct: 71 DISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGFVTFMHVDGAL 130
Query: 905 RAVAEPNPVIDGRKANCNIASFG 837
A+ EP+ IDGR +A+ G
Sbjct: 131 LALKEPSKKIDGRVTVTQLAASG 153
>TAIR9_protein||AT3G56860.3 | Symbols: UBA2A | UBP1 interacting protein 2a
(UBA2a) | chr3:21050708-21052144 REVERSE
Length = 479
Score = 77 bits (189), Expect = 2e-014
Identities = 37/104 (35%), Positives = 55/104 (52%)
Frame = -2
Query: 1085 DTTYTKVFVGGLAWETPTEEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADSAT 906
D + K+FV GL W+T TE + F Q+GEI + + DK +GKSKGYGF+ ++ A
Sbjct: 136 DPVHRKIFVHGLGWDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGAR 195
Query: 905 RAVAEPNPVIDGRKANCNIASFGRPRPSPPRGRGQTGSPSQYQS 774
A+ +P I R C +AS G P +P+Q+ +
Sbjct: 196 NALKQPQKKIGSRMTACQLASKGPVFGGAPIAAAAVSAPAQHSN 239
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,131,669,980
Number of Sequences: 33410
Number of Extensions: 4131669980
Number of Successful Extensions: 158183355
Number of sequences better than 0.0: 0
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