BLASTX 7.6.2
Query= UN06951 /QuerySize=915
(914 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G62110.1 | Symbols: | glycoside hydrolase fam... 374 5e-104
TAIR9_protein||AT4G23500.1 | Symbols: | glycoside hydrolase fam... 154 9e-038
TAIR9_protein||AT3G48950.1 | Symbols: | glycoside hydrolase fam... 149 3e-036
TAIR9_protein||AT4G33440.1 | Symbols: | glycoside hydrolase fam... 143 3e-034
TAIR9_protein||AT3G61490.1 | Symbols: | glycoside hydrolase fam... 141 6e-034
TAIR9_protein||AT3G61490.2 | Symbols: | glycoside hydrolase fam... 141 6e-034
TAIR9_protein||AT5G41870.1 | Symbols: | glycoside hydrolase fam... 141 1e-033
TAIR9_protein||AT4G23820.1 | Symbols: | glycoside hydrolase fam... 139 3e-033
TAIR9_protein||AT3G06770.3 | Symbols: | glycoside hydrolase fam... 138 8e-033
TAIR9_protein||AT3G06770.1 | Symbols: | glycoside hydrolase fam... 138 8e-033
TAIR9_protein||AT3G06770.2 | Symbols: | glycoside hydrolase fam... 138 8e-033
TAIR9_protein||AT3G16850.1 | Symbols: | glycoside hydrolase fam... 133 2e-031
TAIR9_protein||AT5G49215.1 | Symbols: | glycoside hydrolase fam... 133 2e-031
TAIR9_protein||AT5G49215.2 | Symbols: | glycoside hydrolase fam... 133 2e-031
TAIR9_protein||AT2G23900.1 | Symbols: | glycoside hydrolase fam... 129 3e-030
TAIR9_protein||AT1G19170.1 | Symbols: | glycoside hydrolase fam... 121 8e-028
TAIR9_protein||AT3G42950.1 | Symbols: | glycoside hydrolase fam... 117 1e-026
TAIR9_protein||AT1G10640.1 | Symbols: | polygalacturonase | chr... 52 4e-007
TAIR9_protein||AT1G70500.1 | Symbols: | polygalacturonase, puta... 52 5e-007
TAIR9_protein||AT1G80140.1 | Symbols: | glycoside hydrolase fam... 50 1e-006
>TAIR9_protein||AT3G62110.1 | Symbols: | glycoside hydrolase family 28 protein
/ polygalacturonase (pectinase) family protein | chr3:22997313-22999503
REVERSE
Length = 472
Score = 374 bits (959), Expect = 5e-104
Identities = 180/204 (88%), Positives = 192/204 (94%)
Frame = +3
Query: 3 RPSSKIKINRLTGQTSSSSGIAIGSEMSGGVSDIYIKDLHLFNSNTGIRIKTSPGRGGYV 182
RPSSKIKINRLTGQT+SSSGIAIGSEMSGGVS+IYIKDLHLFNSNTGIRIKTS GRGGYV
Sbjct: 269 RPSSKIKINRLTGQTTSSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSAGRGGYV 328
Query: 183 RNVHVSNVKFHDVQKAIRFTGKYGEHPDENFDPKALPAIEKITFENVSGEEIGVAGLLEG 362
RNVH+ NVK +V+KAIRFTGKYGEHPDE +DPKALPAIEKITFENV+G+ IGVAGLLEG
Sbjct: 329 RNVHILNVKLDNVKKAIRFTGKYGEHPDEKYDPKALPAIEKITFENVNGDGIGVAGLLEG 388
Query: 363 IEGDEFKNICFLNVTLTVKKNSKKSPWKCSHVRGYSQWVSPEITCDSFEESIFPEHSSDC 542
IEGD FKNICFLNVTL VKKNSKKSPW+CS+VRGYSQWVSPEITCDS +ESIFPEH SDC
Sbjct: 389 IEGDVFKNICFLNVTLRVKKNSKKSPWECSNVRGYSQWVSPEITCDSLKESIFPEHGSDC 448
Query: 543 FGLSENNLEKSSGLSRSPWLLSW* 614
FGLSENN+E SSGLSRSPWLLSW*
Sbjct: 449 FGLSENNMEISSGLSRSPWLLSW* 472
>TAIR9_protein||AT4G23500.1 | Symbols: | glycoside hydrolase family 28 protein
/ polygalacturonase (pectinase) family protein | chr4:12264640-12267074
FORWARD
Length = 496
Score = 154 bits (388), Expect = 9e-038
Identities = 71/161 (44%), Positives = 106/161 (65%)
Frame = +3
Query: 6 PSSKIKINRLTGQTSSSSGIAIGSEMSGGVSDIYIKDLHLFNSNTGIRIKTSPGRGGYVR 185
P+ ++ I RLT + S+ IA+GSEMSGG+ D+ +D+ NS +GIRIKT+ GRGGYV+
Sbjct: 295 PTKQLLIRRLTCISPDSAVIALGSEMSGGIEDVRAEDIVAINSESGIRIKTAIGRGGYVK 354
Query: 186 NVHVSNVKFHDVQKAIRFTGKYGEHPDENFDPKALPAIEKITFENVSGEEIGVAGLLEGI 365
+V+V + ++ TG YG HPD+++DPKALP I+ I ++++ E + + L GI
Sbjct: 355 DVYVRGMTMMTMKYVFWMTGSYGSHPDDHYDPKALPVIQNINYQDMVAENVTMPAQLAGI 414
Query: 366 EGDEFKNICFLNVTLTVKKNSKKSPWKCSHVRGYSQWVSPE 488
GD+F IC NVT+T+ K KK W C+ V GY+ V+P+
Sbjct: 415 SGDQFTGICISNVTITLSKKPKKVLWNCTDVSGYTSGVTPQ 455
>TAIR9_protein||AT3G48950.1 | Symbols: | glycoside hydrolase family 28 protein
/ polygalacturonase (pectinase) family protein | chr3:18148017-18149987
FORWARD
Length = 470
Score = 149 bits (375), Expect = 3e-036
Identities = 70/179 (39%), Positives = 108/179 (60%), Gaps = 1/179 (0%)
Frame = +3
Query: 6 PSSKIKINRLTGQTSSSSGIAIGSEMSGGVSDIYIKDLHLFNSNTGIRIKTSPGRGGYVR 185
P+ ++ I RLT + S+G+A+GSEMSGG+ D+ I+D+ L N+ + IRIKT+ GRG YV+
Sbjct: 273 PTQQLSIRRLTCISPKSAGVALGSEMSGGIKDVRIEDVTLTNTESAIRIKTAVGRGAYVK 332
Query: 186 NVHVSNVKFHDVQKAIRFTGKYGEHPDENFDPKALPAIEKITFENVSGEEIGVAGLLEGI 365
+++ + ++ +G YG HPDE FDPKALP I I + +++ E + ++ L+GI
Sbjct: 333 DIYARRITMKTMKYVFWMSGNYGSHPDEGFDPKALPEITNINYRDMTAENVTMSASLDGI 392
Query: 366 EGDEFKNICFLNVTLTVKKNSKKSPWKCSHVRGYSQWVSPEITCDSFEESIFPEHSSDC 542
+ D F IC NVT+ + +KK W C+ V G + V+PE C E + DC
Sbjct: 393 DKDPFTGICISNVTIALAAKAKKMQWNCTDVAGVTSRVTPE-PCSLLPEKKAQAKNVDC 450
>TAIR9_protein||AT4G33440.1 | Symbols: | glycoside hydrolase family 28 protein
/ polygalacturonase (pectinase) family protein | chr4:16092020-16094732
FORWARD
Length = 476
Score = 143 bits (358), Expect = 3e-034
Identities = 71/161 (44%), Positives = 102/161 (63%), Gaps = 2/161 (1%)
Frame = +3
Query: 3 RPSSKIKINRLTGQTSSSSGIAIGSEMSGGVSDIYIKDLHLFNSNTGIRIKTSPGRGGYV 182
RPSS I I R++G T + SG+ IGSEMSGG+ +I ++D+H+++S G+RIKT GRGGY+
Sbjct: 298 RPSSNIVIRRISGTTRTCSGVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYI 357
Query: 183 RNVHVSNVKFHDVQKAIRFTGKYGEHPDENFDPKALPAIEKITFENVSGEEIGVAGLLEG 362
N+ +NV V+ IRF+ +H D+ +DPKALP ++ I NV A +L G
Sbjct: 358 SNITFNNVLLEKVKVPIRFSSGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLG 417
Query: 363 IEGDEFKNICFLNVTLTVKKNSKKSPWKCSHVRGYSQWVSP 485
+EG F+++C NVTL ++K WKC V GY+ V P
Sbjct: 418 VEGTSFQDVCLRNVTLLGLPKTEK--WKCKDVSGYASDVFP 456
>TAIR9_protein||AT3G61490.1 | Symbols: | glycoside hydrolase family 28 protein
/ polygalacturonase (pectinase) family protein | chr3:22758439-22760137
FORWARD
Length = 477
Score = 141 bits (355), Expect = 6e-034
Identities = 66/165 (40%), Positives = 100/165 (60%), Gaps = 1/165 (0%)
Frame = +3
Query: 6 PSSKIKINRLTGQTSSSSGIAIGSEMSGGVSDIYIKDLHLFNSNTGIRIKTSPGRGGYVR 185
P+ + I RLT + S+ IA+GSEMSGG+ D+ +D+ + + +G+RIKT+ GRG +V+
Sbjct: 272 PTKHLVIRRLTCISPYSAAIALGSEMSGGIEDVRAEDITAYQTESGVRIKTAVGRGAFVK 331
Query: 186 NVHVSNVKFHDVQKAIRFTGKYGEHPDENFDPKALPAIEKITFENVSGEEIGVAGLLEGI 365
N++V + H ++ TG Y H D ++DP ALP I I + ++ E + +AG LEGI
Sbjct: 332 NIYVKGMNLHTMKWVFWMTGNYKAHADSHYDPHALPEITGINYRDIVAENVSMAGRLEGI 391
Query: 366 EGDEFKNICFLNVTLTVKKNSKKSPWKCSHVRGYSQWVSPEITCD 500
GD F IC N T+++ KK+ W CS V G + V P+ CD
Sbjct: 392 SGDPFTGICISNATISMAAKHKKAIWMCSDVEGVTSGVDPK-PCD 435
>TAIR9_protein||AT3G61490.2 | Symbols: | glycoside hydrolase family 28 protein
/ polygalacturonase (pectinase) family protein | chr3:22758439-22760137
FORWARD
Length = 477
Score = 141 bits (355), Expect = 6e-034
Identities = 66/165 (40%), Positives = 100/165 (60%), Gaps = 1/165 (0%)
Frame = +3
Query: 6 PSSKIKINRLTGQTSSSSGIAIGSEMSGGVSDIYIKDLHLFNSNTGIRIKTSPGRGGYVR 185
P+ + I RLT + S+ IA+GSEMSGG+ D+ +D+ + + +G+RIKT+ GRG +V+
Sbjct: 272 PTKHLVIRRLTCISPYSAAIALGSEMSGGIEDVRAEDITAYQTESGVRIKTAVGRGAFVK 331
Query: 186 NVHVSNVKFHDVQKAIRFTGKYGEHPDENFDPKALPAIEKITFENVSGEEIGVAGLLEGI 365
N++V + H ++ TG Y H D ++DP ALP I I + ++ E + +AG LEGI
Sbjct: 332 NIYVKGMNLHTMKWVFWMTGNYKAHADSHYDPHALPEITGINYRDIVAENVSMAGRLEGI 391
Query: 366 EGDEFKNICFLNVTLTVKKNSKKSPWKCSHVRGYSQWVSPEITCD 500
GD F IC N T+++ KK+ W CS V G + V P+ CD
Sbjct: 392 SGDPFTGICISNATISMAAKHKKAIWMCSDVEGVTSGVDPK-PCD 435
>TAIR9_protein||AT5G41870.1 | Symbols: | glycoside hydrolase family 28 protein
/ polygalacturonase (pectinase) family protein | chr5:16758817-16760490
REVERSE
Length = 450
Score = 141 bits (353), Expect = 1e-033
Identities = 72/162 (44%), Positives = 108/162 (66%), Gaps = 5/162 (3%)
Frame = +3
Query: 3 RPSSKIKINRLTGQTSSSSGIAIGSEMSGGVSDIYIKDLHLFNSNTGIRIKTSPGRGGYV 182
RPS I I R+TG +S +GIAIGSE SGG+ ++ ++++ L+NS GI IKT+ GRGG +
Sbjct: 272 RPSRDITIRRITG-SSPFAGIAIGSETSGGIQNVTVENITLYNSGIGIHIKTNIGRGGSI 330
Query: 183 RNVHVSNVKFHDVQKAIRFTGKYGEHPDENFDPKALPAIEKITFENVSGEEIGVAGLLEG 362
+ + +S V V+ I+ +G G+HPD+ F+ ALP + IT +NV G ++ AG+++G
Sbjct: 331 QGITISGVYLEKVRTGIKISGDTGDHPDDKFNTSALPIVRGITIKNVWGIKVERAGMVQG 390
Query: 363 IEGDEFKNICFLNVTLTVKKNSKKSP-WKCSHVRGYSQWVSP 485
++ F N+CF NVTLT +K+SP WKCS V G + V+P
Sbjct: 391 LKDSPFTNLCFSNVTLT---GTKRSPIWKCSDVVGAADKVNP 429
>TAIR9_protein||AT4G23820.1 | Symbols: | glycoside hydrolase family 28 protein
/ polygalacturonase (pectinase) family protein | chr4:12397217-12400050
REVERSE
Length = 445
Score = 139 bits (349), Expect = 3e-033
Identities = 72/161 (44%), Positives = 101/161 (62%), Gaps = 2/161 (1%)
Frame = +3
Query: 3 RPSSKIKINRLTGQTSSSSGIAIGSEMSGGVSDIYIKDLHLFNSNTGIRIKTSPGRGGYV 182
RPSS I I R+TG +S +GIAIGSE SGG+ +I + + L N G+ IKT+ GRGGY+
Sbjct: 267 RPSSNITIRRITG-SSPFAGIAIGSETSGGIKNIIAEHITLSNMGVGVNIKTNIGRGGYI 325
Query: 183 RNVHVSNVKFHDVQKAIRFTGKYGEHPDENFDPKALPAIEKITFENVSGEEIGVAGLLEG 362
+N+ +S+V + I+ G G+HPDEN++P ALP ++ I +NV G + AG ++G
Sbjct: 326 KNIKISDVYVDTAKYGIKIAGDTGDHPDENYNPNALPVVKGIHIKNVWGVNVRNAGSIQG 385
Query: 363 IEGDEFKNICFLNVTLTVKKNSKKSPWKCSHVRGYSQWVSP 485
++G F IC + L NS K+ WKCS V G S VSP
Sbjct: 386 LKGSPFTGICLSEINLHGSLNSYKT-WKCSDVSGTSLKVSP 425
>TAIR9_protein||AT3G06770.3 | Symbols: | glycoside hydrolase family 28 protein
/ polygalacturonase (pectinase) family protein | chr3:2135119-2136616
REVERSE
Length = 378
Score = 138 bits (345), Expect = 8e-033
Identities = 66/162 (40%), Positives = 100/162 (61%), Gaps = 1/162 (0%)
Frame = +3
Query: 3 RPSSKIKINRLTGQTSSSSGIAIGSEMSGGVSDIYIKDLHLFNSNTGIRIKTSPGRGGYV 182
RP+ + I + + +S S I+ GSEMSGG+SD+ + + H+ S TGI +T+ GRGGY+
Sbjct: 200 RPTENVHIRNVYLRGASGSSISFGSEMSGGISDVVVDNAHIHYSLTGIAFRTTKGRGGYI 259
Query: 183 RNVHVSNVKFHDVQKAIRFTGKYGEHPDENFDPKALPAIEKITFENVSGEEIGVAGLLEG 362
+ + +SN+ + AI G +G HPD+ +D ALP + I N+SGE IG+AG L G
Sbjct: 260 KEIDISNIDMLRIGTAIVANGSFGSHPDDKYDVNALPLVSHIRLSNISGENIGIAGKLFG 319
Query: 363 IEGDEFKNICFLNVTLTVKKNSKKSPWKCSHVRGYSQWVSPE 488
I+ F ++ NV+L++ S S W+CS+V G S+ V PE
Sbjct: 320 IKESPFSSVTLSNVSLSMSSGSSVS-WQCSYVYGSSESVIPE 360
>TAIR9_protein||AT3G06770.1 | Symbols: | glycoside hydrolase family 28 protein
/ polygalacturonase (pectinase) family protein | chr3:2135119-2136616
REVERSE
Length = 378
Score = 138 bits (345), Expect = 8e-033
Identities = 66/162 (40%), Positives = 100/162 (61%), Gaps = 1/162 (0%)
Frame = +3
Query: 3 RPSSKIKINRLTGQTSSSSGIAIGSEMSGGVSDIYIKDLHLFNSNTGIRIKTSPGRGGYV 182
RP+ + I + + +S S I+ GSEMSGG+SD+ + + H+ S TGI +T+ GRGGY+
Sbjct: 200 RPTENVHIRNVYLRGASGSSISFGSEMSGGISDVVVDNAHIHYSLTGIAFRTTKGRGGYI 259
Query: 183 RNVHVSNVKFHDVQKAIRFTGKYGEHPDENFDPKALPAIEKITFENVSGEEIGVAGLLEG 362
+ + +SN+ + AI G +G HPD+ +D ALP + I N+SGE IG+AG L G
Sbjct: 260 KEIDISNIDMLRIGTAIVANGSFGSHPDDKYDVNALPLVSHIRLSNISGENIGIAGKLFG 319
Query: 363 IEGDEFKNICFLNVTLTVKKNSKKSPWKCSHVRGYSQWVSPE 488
I+ F ++ NV+L++ S S W+CS+V G S+ V PE
Sbjct: 320 IKESPFSSVTLSNVSLSMSSGSSVS-WQCSYVYGSSESVIPE 360
>TAIR9_protein||AT3G06770.2 | Symbols: | glycoside hydrolase family 28 protein
/ polygalacturonase (pectinase) family protein | chr3:2135119-2137033
REVERSE
Length = 447
Score = 138 bits (345), Expect = 8e-033
Identities = 66/162 (40%), Positives = 100/162 (61%), Gaps = 1/162 (0%)
Frame = +3
Query: 3 RPSSKIKINRLTGQTSSSSGIAIGSEMSGGVSDIYIKDLHLFNSNTGIRIKTSPGRGGYV 182
RP+ + I + + +S S I+ GSEMSGG+SD+ + + H+ S TGI +T+ GRGGY+
Sbjct: 269 RPTENVHIRNVYLRGASGSSISFGSEMSGGISDVVVDNAHIHYSLTGIAFRTTKGRGGYI 328
Query: 183 RNVHVSNVKFHDVQKAIRFTGKYGEHPDENFDPKALPAIEKITFENVSGEEIGVAGLLEG 362
+ + +SN+ + AI G +G HPD+ +D ALP + I N+SGE IG+AG L G
Sbjct: 329 KEIDISNIDMLRIGTAIVANGSFGSHPDDKYDVNALPLVSHIRLSNISGENIGIAGKLFG 388
Query: 363 IEGDEFKNICFLNVTLTVKKNSKKSPWKCSHVRGYSQWVSPE 488
I+ F ++ NV+L++ S S W+CS+V G S+ V PE
Sbjct: 389 IKESPFSSVTLSNVSLSMSSGSSVS-WQCSYVYGSSESVIPE 429
>TAIR9_protein||AT3G16850.1 | Symbols: | glycoside hydrolase family 28 protein
/ polygalacturonase (pectinase) family protein | chr3:5748692-5750981
FORWARD
Length = 456
Score = 133 bits (333), Expect = 2e-031
Identities = 67/162 (41%), Positives = 99/162 (61%), Gaps = 3/162 (1%)
Frame = +3
Query: 3 RPSSKIKINRLTGQTSSSSGIAIGSEMSGGVSDIYIKDLHLFNSNTGIRIKTSPGRGGYV 182
RP++ + I L ++ + +GI+ GSEMSGGVSD+ ++ L++ +S G+ +T+ GRGGY+
Sbjct: 266 RPTTAVHIRNLRLKSPTGAGISFGSEMSGGVSDVTVERLNIHSSLIGVAFRTTRGRGGYI 325
Query: 183 RNVHVSNVKFHDVQKAIRFTGKYGEHPDENFDPKALPAIEKITFENVSGEEIGVAGLLEG 362
RN+ +S+V V AI G G HPD+ FD ALP + I N +G +IGVAG L G
Sbjct: 326 RNITISDVDLTSVDTAIVANGHTGSHPDDKFDRDALPVVTHIVMRNFTGVDIGVAGNLTG 385
Query: 363 IEGDEFKNICFLNVTLTVKKNSKKSPWKCSHVRGYSQWVSPE 488
I F +IC ++ L + + W CS+V G+S VSPE
Sbjct: 386 IGESPFTSICLADIHLQTR---SEESWICSNVSGFSDDVSPE 424
>TAIR9_protein||AT5G49215.1 | Symbols: | glycoside hydrolase family 28 protein
/ polygalacturonase (pectinase) family protein | chr5:19953670-19955874
FORWARD
Length = 450
Score = 133 bits (333), Expect = 2e-031
Identities = 62/163 (38%), Positives = 98/163 (60%), Gaps = 1/163 (0%)
Frame = +3
Query: 3 RPSSKIKINRLTGQTSSSSGIAIGSEMSGGVSDIYIKDLHLFNSNTGIRIKTSPGRGGYV 182
RP++ ++I + + +S S I+ GSEMSGG+SD+ + D H+ NS +GI +T+ GRGGY+
Sbjct: 269 RPTANVQIRNVYLRAASGSSISFGSEMSGGISDVEVSDAHIHNSLSGIAFRTTNGRGGYI 328
Query: 183 RNVHVSNVKFHDVQKAIRFTGKYGEHPDENFDPKALPAIEKITFENVSGEEIGVAGLLEG 362
+ + +SN+ +V A G +G HPD FD A P + I ++ GE I AG G
Sbjct: 329 KEIDISNIHMVNVGTAFLANGSFGTHPDSGFDENAYPLVSHIRLHDIVGENISTAGYFFG 388
Query: 363 IEGDEFKNICFLNVTLTVKKN-SKKSPWKCSHVRGYSQWVSPE 488
+ F +I N++L++K + S W+CS+V G S++V PE
Sbjct: 389 TKESPFTSILLSNISLSIKNSASPADSWQCSYVDGSSEFVVPE 431
>TAIR9_protein||AT5G49215.2 | Symbols: | glycoside hydrolase family 28 protein
/ polygalacturonase (pectinase) family protein | chr5:19953670-19955874
FORWARD
Length = 448
Score = 133 bits (333), Expect = 2e-031
Identities = 62/163 (38%), Positives = 98/163 (60%), Gaps = 1/163 (0%)
Frame = +3
Query: 3 RPSSKIKINRLTGQTSSSSGIAIGSEMSGGVSDIYIKDLHLFNSNTGIRIKTSPGRGGYV 182
RP++ ++I + + +S S I+ GSEMSGG+SD+ + D H+ NS +GI +T+ GRGGY+
Sbjct: 267 RPTANVQIRNVYLRAASGSSISFGSEMSGGISDVEVSDAHIHNSLSGIAFRTTNGRGGYI 326
Query: 183 RNVHVSNVKFHDVQKAIRFTGKYGEHPDENFDPKALPAIEKITFENVSGEEIGVAGLLEG 362
+ + +SN+ +V A G +G HPD FD A P + I ++ GE I AG G
Sbjct: 327 KEIDISNIHMVNVGTAFLANGSFGTHPDSGFDENAYPLVSHIRLHDIVGENISTAGYFFG 386
Query: 363 IEGDEFKNICFLNVTLTVKKN-SKKSPWKCSHVRGYSQWVSPE 488
+ F +I N++L++K + S W+CS+V G S++V PE
Sbjct: 387 TKESPFTSILLSNISLSIKNSASPADSWQCSYVDGSSEFVVPE 429
>TAIR9_protein||AT2G23900.1 | Symbols: | glycoside hydrolase family 28 protein
/ polygalacturonase (pectinase) family protein | chr2:10174556-10176489
FORWARD
Length = 478
Score = 129 bits (323), Expect = 3e-030
Identities = 58/161 (36%), Positives = 94/161 (58%)
Frame = +3
Query: 6 PSSKIKINRLTGQTSSSSGIAIGSEMSGGVSDIYIKDLHLFNSNTGIRIKTSPGRGGYVR 185
P+ ++ I RLT + S+GIA+GSEMSGG+ D+ I+D+ L + + IRIKT+ GRGGYV+
Sbjct: 284 PTQQLSIRRLTCISPDSAGIALGSEMSGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVK 343
Query: 186 NVHVSNVKFHDVQKAIRFTGKYGEHPDENFDPKALPAIEKITFENVSGEEIGVAGLLEGI 365
++ ++ +G Y +HP FDPKA+P I I + +++ + + L+G
Sbjct: 344 DIFARRFTMKTMKYVFWMSGAYNQHPASGFDPKAMPVITNINYRDMTADNVTQPARLDGF 403
Query: 366 EGDEFKNICFLNVTLTVKKNSKKSPWKCSHVRGYSQWVSPE 488
+ D F IC N+ + + KK W C+ + G S V+P+
Sbjct: 404 KNDPFTKICMSNIKIDLAAEPKKLLWNCTSISGVSSKVTPK 444
>TAIR9_protein||AT1G19170.1 | Symbols: | glycoside hydrolase family 28 protein
/ polygalacturonase (pectinase) family protein | chr1:6616777-6618875
FORWARD
Length = 507
Score = 121 bits (302), Expect = 8e-028
Identities = 64/156 (41%), Positives = 98/156 (62%), Gaps = 5/156 (3%)
Frame = +3
Query: 3 RPSSKIKINRLTGQTSSSSGIAIGSEMSGGVSDIYIKDLHLFNSNTGIRIKTSPGRGGYV 182
RPS+ I I L ++ S+G++IGSEMSGG+S++ I++L ++NS GIRIKT+PGRGGY+
Sbjct: 315 RPSTNILIRNLVVRSVISAGVSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYI 374
Query: 183 RNVHVSNVKFHDVQKAIRFTGKYGEHPDENFDPKALPAIEKITFENVSGEEIGVAGLLEG 362
RN+ N+ +V+ I Y EH D+N+D KA P + +F + G+ + V + G
Sbjct: 375 RNITYKNLTLDNVRVGIVIKTDYNEHADDNYDRKAYPILSGFSFAGIHGQGVRVPVRIHG 434
Query: 363 IEGDEFKNICF--LNVTLTVKKNSKKSPWKCSHVRG 464
E +N+ F ++V LT K KK ++CS V+G
Sbjct: 435 SEQIPVRNVTFRDMSVGLTYK---KKHIFQCSFVKG 467
>TAIR9_protein||AT3G42950.1 | Symbols: | glycoside hydrolase family 28 protein
/ polygalacturonase (pectinase) family protein | chr3:15015383-15017800
FORWARD
Length = 485
Score = 117 bits (292), Expect = 1e-026
Identities = 61/156 (39%), Positives = 99/156 (63%), Gaps = 5/156 (3%)
Frame = +3
Query: 3 RPSSKIKINRLTGQTSSSSGIAIGSEMSGGVSDIYIKDLHLFNSNTGIRIKTSPGRGGYV 182
+PS I I L ++ S+GI+IGSEMSGGVS+I ++++ +++S G+RIKT+PGRGGYV
Sbjct: 293 KPSKNILIRNLIIRSMVSAGISIGSEMSGGVSNITVENILIWSSRRGVRIKTAPGRGGYV 352
Query: 183 RNVHVSNVKFHDVQKAIRFTGKYGEHPDENFDPKALPAIEKITFENVSGEEIGVAGLLEG 362
R++ NV +++ I Y EHPD F+P+A P +E I + + G+ + V ++G
Sbjct: 353 RDITFRNVTLDELRVGIVIKTDYNEHPDGGFNPQAFPILENINYTGIYGQGVRVPVRIQG 412
Query: 363 IEGDEFKNICF--LNVTLTVKKNSKKSPWKCSHVRG 464
+ KN+ F ++V +T K KK ++C++V G
Sbjct: 413 SKEIPVKNVTFRDMSVGITYK---KKHIFQCAYVEG 445
>TAIR9_protein||AT1G10640.1 | Symbols: | polygalacturonase |
chr1:3515478-3517807 REVERSE
Length = 533
Score = 52 bits (124), Expect = 4e-007
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Frame = +3
Query: 60 GIAIGSEMSGG----VSDIYIKDLHLFNSNTGIRIKTSPGRGGYVRNVHVSNVKFHDVQK 227
GI+IGS G VS+I ++D+ + N+ TG+RIKT G G V+ + SN++ + VQ
Sbjct: 364 GISIGSLGKEGTKACVSNITVRDVAMHNTMTGVRIKTWQGGVGSVKGIIFSNIQLNQVQI 423
Query: 228 AIRFTGKYGEHPDENFDPKALPAIEKITFENVSG 329
I Y +H A+ A+E +T+E + G
Sbjct: 424 PITINQFYCDHSKCKNQTSAV-AVEGVTYERIKG 456
>TAIR9_protein||AT1G70500.1 | Symbols: | polygalacturonase, putative /
pectinase, putative | chr1:26566579-26568729 REVERSE
Length = 469
Score = 52 bits (123), Expect = 5e-007
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Frame = +3
Query: 9 SSKIKINRLTGQTSSSSGIAIGS----EMSGGVSDIYIKDLHLFNSNTGIRIKTSPGRGG 176
S+KIK+ R+ GI+IGS G V+ + ++ L N+ G+RIKT G G
Sbjct: 271 SAKIKMKRI--YCGPGHGISIGSLGQGHSKGTVTAVVLETAFLKNTTNGLRIKTWQGGNG 328
Query: 177 YVRNVHVSNVKFHDVQKAIRFTGKYGEHPDENFDPKALPAIEKITFENVSG 329
YV+ V NV DV I Y + P + + I +I + N++G
Sbjct: 329 YVKGVRFENVVMQDVANPIIIDQFYCDSPSTCQNQTSAVHISEIMYRNITG 379
>TAIR9_protein||AT1G80140.1 | Symbols: | glycoside hydrolase family 28 protein
/ polygalacturonase (pectinase) family protein | chr1:30146611-30148180
FORWARD
Length = 337
Score = 50 bits (119), Expect = 1e-006
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 7/152 (4%)
Frame = +3
Query: 60 GIAIGSEMSGG----VSDIYIKDLHLFNSNTGIRIKTSPGRGGYVRNVHVSNVKFHDVQK 227
G++IGS GG V +I + ++ + G RIKT PG GYVR + +++F VQ
Sbjct: 185 GVSIGSLGRGGTEVTVENIRVSHVNFTGTTNGARIKTWPGGTGYVRGIEFFDIRFSSVQN 244
Query: 228 AIRFTGKYGEHPDENFDPKALPAIEKITFENVSGEEIGVAGLLEGIEGDEF--KNICFLN 401
I YG P K + IEK+ + +SG + G+ N+ +
Sbjct: 245 PIIIDQFYGCAPTCVETMKGV-HIEKVRYMKMSGTSATKVAMKLECSGESVPCSNLFMRD 303
Query: 402 VTLTVKKNSKKSPWKCSHVRGYSQWVSPEITC 497
+ L+ CS G +Q + ++C
Sbjct: 304 IDLSPADGIDSVSSLCSFAHGSAQGIIRPLSC 335
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,175,170,284
Number of Sequences: 33410
Number of Extensions: 4175170284
Number of Successful Extensions: 158200266
Number of sequences better than 0.0: 0
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