BLASTX 7.6.2
Query= UN06952 /QuerySize=769
(768 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P92966|RSP41_ARATH Arginine/serine-rich-splicing factor RSP41... 346 1e-094
sp|P92965|RSP40_ARATH Arginine/serine-rich-splicing factor RSP40... 338 4e-092
sp|P92964|RSP31_ARATH Arginine/serine-rich-splicing factor RSP31... 246 1e-064
sp|Q10021|RSP5_CAEEL Probable splicing factor, arginine/serine-r... 64 8e-010
sp|Q9BQ04|RBM4B_HUMAN RNA-binding protein 4B OS=Homo sapiens GN=... 54 8e-007
sp|Q8VE92|RBM4B_MOUSE RNA-binding protein 4B OS=Mus musculus GN=... 54 8e-007
sp|Q06AT9|RBM4B_PIG RNA-binding protein 4B OS=Sus scrofa GN=RBM4... 54 8e-007
sp|Q64LC9|RBM4B_RAT RNA-binding protein 4B OS=Rattus norvegicus ... 54 8e-007
sp|Q8C7Q4|RBM4_MOUSE RNA-binding protein 4 OS=Mus musculus GN=Rb... 54 8e-007
sp|Q9BDY9|RBM4_RABIT RNA-binding protein 4 OS=Oryctolagus cunicu... 54 8e-007
sp|Q23121|RSP1_CAEEL Probable splicing factor, arginine/serine-r... 53 2e-006
sp|Q3MHX3|RBM4_BOVIN RNA-binding protein 4 OS=Bos taurus GN=RBM4... 53 2e-006
sp|Q9BWF3|RBM4_HUMAN RNA-binding protein 4 OS=Homo sapiens GN=RB... 53 2e-006
sp|Q4R979|RBM4_MACFA RNA-binding protein 4 OS=Macaca fasciculari... 53 2e-006
sp|P26686|SRR55_DROME Serine-arginine protein 55 OS=Drosophila m... 51 7e-006
>sp|P92966|RSP41_ARATH Arginine/serine-rich-splicing factor RSP41 OS=Arabidopsis
thaliana GN=RSP41 PE=1 SV=2
Length = 356
Score = 346 bits (887), Expect = 1e-094
Identities = 170/189 (89%), Positives = 182/189 (96%), Gaps = 1/189 (0%)
Frame = +2
Query: 140 MRPVFCGNFEYDAREGDLERLFRRYGKVDRVDMKAGFAFVYMENERDAEDAIRALDRYEY 319
M+PVFCGNFEYDARE DLERLFR+YGKV+RVDMKAGFAFVYME+ERDAEDAIRALDR+EY
Sbjct: 1 MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60
Query: 320 GRKGRRLRVEWTKNERGAPVKSGGSRRSSS-LRPSKTLFVINFDAESTRTRDLERHFEPY 496
GR GRRLRVEWTKN+RG +SGGSRRSSS LRPSKTLFVINFDA++TRTRDLERHFEPY
Sbjct: 61 GRTGRRLRVEWTKNDRGGAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHFEPY 120
Query: 497 GKIVNVRIRRNFAFIQYELQEDATRALEATNSSKLMDKVISVEYAMKDDDARGNGYSPER 676
GKIVNVRIRRNFAFIQYE QEDATRAL+ATNSSKLMDKVISVEYA+KDDD+RGNGYSPER
Sbjct: 121 GKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYSPER 180
Query: 677 RRDRSPDRR 703
RRDRSPDRR
Sbjct: 181 RRDRSPDRR 189
>sp|P92965|RSP40_ARATH Arginine/serine-rich-splicing factor RSP40 OS=Arabidopsis
thaliana GN=RSP40 PE=1 SV=2
Length = 350
Score = 338 bits (865), Expect = 4e-092
Identities = 164/190 (86%), Positives = 182/190 (95%), Gaps = 2/190 (1%)
Frame = +2
Query: 140 MRPVFCGNFEYDAREGDLERLFRRYGKVDRVDMKAGFAFVYMENERDAEDAIRALDRYEY 319
M+PVFCGNFEYDAREGDLERLFR+YGKV+RVDMKAGFAFVYME+ERDAEDAIRALDR+E+
Sbjct: 1 MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60
Query: 320 GRKGRRLRVEWTKNERGAPVKSGGS--RRSSSLRPSKTLFVINFDAESTRTRDLERHFEP 493
GRKGRRLRVEWTK+ERG +SGG R SSS+RPSKTLFVINFDA++TRTRDLE+HFEP
Sbjct: 61 GRKGRRLRVEWTKSERGGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHFEP 120
Query: 494 YGKIVNVRIRRNFAFIQYELQEDATRALEATNSSKLMDKVISVEYAMKDDDARGNGYSPE 673
YGKIVNVRIRRNFAFIQYE QEDATRAL+A+N+SKLMDKVISVEYA+KDDDARGNG+SPE
Sbjct: 121 YGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHSPE 180
Query: 674 RRRDRSPDRR 703
RRRDRSP+RR
Sbjct: 181 RRRDRSPERR 190
>sp|P92964|RSP31_ARATH Arginine/serine-rich-splicing factor RSP31 OS=Arabidopsis
thaliana GN=RSP31 PE=1 SV=2
Length = 264
Score = 246 bits (627), Expect = 1e-064
Identities = 122/195 (62%), Positives = 150/195 (76%), Gaps = 11/195 (5%)
Frame = +2
Query: 140 MRPVFCGNFEYDAREGDLERLFRRYGKVDRVDMKAGFAFVYMENERDAEDAIRALDRYEY 319
MRPVF GNFEY+ R+ DLERLF +YG+VDRVDMK+G+AFVY E+ERDAEDAIR LD + +
Sbjct: 1 MRPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKSGYAFVYFEDERDAEDAIRKLDNFPF 60
Query: 320 GRKGRRLRVEWTKNERGAPVKSGGSRRSSSLRPSKTLFVINFDAESTRTRDLERHFEPYG 499
G + RRL VEW K ERG P G ++ S+L+P+KTLFVINFD T+ D+E+HFEPYG
Sbjct: 61 GYEKRRLSVEWAKGERGRP--RGDAKAPSNLKPTKTLFVINFDPIRTKEHDIEKHFEPYG 118
Query: 500 KIVNVRIRRNFAFIQYELQEDATRALEATNSSKLMDKVISVEYAMKDDDA---RGNGYSP 670
K+ NVRIRRNF+F+Q+E QEDAT+ALEAT SK++D+V+SVEYA+KDDD R G SP
Sbjct: 119 KVTNVRIRRNFSFVQFETQEDATKALEATQRSKILDRVVSVEYALKDDDERDDRNGGRSP 178
Query: 671 ER------RRDRSPD 697
R RR SPD
Sbjct: 179 RRSLSPVYRRRPSPD 193
>sp|Q10021|RSP5_CAEEL Probable splicing factor, arginine/serine-rich 5
OS=Caenorhabditis elegans GN=rsp-5 PE=2 SV=3
Length = 208
Score = 64 bits (155), Expect = 8e-010
Identities = 38/96 (39%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Frame = +2
Query: 140 MRPVFCGNFEYDAREGDLERLFRRYGKVDRVDMKAGFAFVYMENERDAEDAIRALDRYEY 319
M ++ G Y+ARE D+ER + YGK++ + MK GFAFV E+ RDAEDA LD
Sbjct: 1 MPRLYLGKIPYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDACHDLDGKTM 60
Query: 320 GRKGRRLRVEWTKNE-RGAPVKSGGSRRSSSLRPSK 424
RL VE + + RG S R S P +
Sbjct: 61 EGSSMRLVVEMARGKPRGNDRHGSRSPRRRSRSPRR 96
>sp|Q9BQ04|RBM4B_HUMAN RNA-binding protein 4B OS=Homo sapiens GN=RBM4B PE=1
SV=1
Length = 359
Score = 54 bits (129), Expect = 8e-007
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Frame = +2
Query: 140 MRPVFCGNFEYDAREGDLERLFRRYGKVDRVDMKAGFAFVYMENERDAEDAIRALDRYEY 319
M +F GN +A E ++ LF +YGKV D+ + FV++E++ AEDAIR L Y+
Sbjct: 1 MVKLFIGNLPREATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIRNLHHYKL 60
Query: 320 GRKGRRLRVEWTKNERGAPVK 382
G + VE +KN+ A K
Sbjct: 61 --HGVNINVEASKNKSKASTK 79
>sp|Q8VE92|RBM4B_MOUSE RNA-binding protein 4B OS=Mus musculus GN=Rbm4b PE=2
SV=1
Length = 357
Score = 54 bits (129), Expect = 8e-007
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Frame = +2
Query: 140 MRPVFCGNFEYDAREGDLERLFRRYGKVDRVDMKAGFAFVYMENERDAEDAIRALDRYEY 319
M +F GN +A E ++ LF +YGKV D+ + FV++E++ AEDAIR L Y+
Sbjct: 1 MVKLFIGNLPREATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIRNLHHYKL 60
Query: 320 GRKGRRLRVEWTKNERGAPVK 382
G + VE +KN+ A K
Sbjct: 61 --HGVNINVEASKNKSKASTK 79
>sp|Q06AT9|RBM4B_PIG RNA-binding protein 4B OS=Sus scrofa GN=RBM4B PE=2 SV=1
Length = 359
Score = 54 bits (129), Expect = 8e-007
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Frame = +2
Query: 140 MRPVFCGNFEYDAREGDLERLFRRYGKVDRVDMKAGFAFVYMENERDAEDAIRALDRYEY 319
M +F GN +A E ++ LF +YGKV D+ + FV++E++ AEDAIR L Y+
Sbjct: 1 MVKLFIGNLPREATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIRNLHHYKL 60
Query: 320 GRKGRRLRVEWTKNERGAPVK 382
G + VE +KN+ A K
Sbjct: 61 --HGVNINVEASKNKSKASTK 79
>sp|Q64LC9|RBM4B_RAT RNA-binding protein 4B OS=Rattus norvegicus GN=Rbm4b PE=2
SV=2
Length = 357
Score = 54 bits (129), Expect = 8e-007
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Frame = +2
Query: 140 MRPVFCGNFEYDAREGDLERLFRRYGKVDRVDMKAGFAFVYMENERDAEDAIRALDRYEY 319
M +F GN +A E ++ LF +YGKV D+ + FV++E++ AEDAIR L Y+
Sbjct: 1 MVKLFIGNLPREATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIRNLHHYKL 60
Query: 320 GRKGRRLRVEWTKNERGAPVK 382
G + VE +KN+ A K
Sbjct: 61 --HGVNINVEASKNKSKASTK 79
>sp|Q8C7Q4|RBM4_MOUSE RNA-binding protein 4 OS=Mus musculus GN=Rbm4 PE=2 SV=1
Length = 361
Score = 54 bits (129), Expect = 8e-007
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Frame = +2
Query: 140 MRPVFCGNFEYDAREGDLERLFRRYGKVDRVDMKAGFAFVYMENERDAEDAIRALDRYEY 319
M +F GN +A E ++ LF +YGKV D+ + FV++E++ AEDAIR L Y+
Sbjct: 1 MVKLFIGNLPREATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIRNLHHYKL 60
Query: 320 GRKGRRLRVEWTKNERGAPVK 382
G + VE +KN+ A K
Sbjct: 61 --HGVNINVEASKNKSKASTK 79
>sp|Q9BDY9|RBM4_RABIT RNA-binding protein 4 OS=Oryctolagus cuniculus GN=RBM4
PE=2 SV=1
Length = 359
Score = 54 bits (129), Expect = 8e-007
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Frame = +2
Query: 140 MRPVFCGNFEYDAREGDLERLFRRYGKVDRVDMKAGFAFVYMENERDAEDAIRALDRYEY 319
M +F GN +A E ++ LF +YGKV D+ + FV++E++ AEDAIR L Y+
Sbjct: 1 MVKLFIGNLPREATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIRNLHHYKL 60
Query: 320 GRKGRRLRVEWTKNERGAPVK 382
G + VE +KN+ A K
Sbjct: 61 --HGVNINVEASKNKSKASTK 79
>sp|Q23121|RSP1_CAEEL Probable splicing factor, arginine/serine-rich 1
OS=Caenorhabditis elegans GN=rsp-1 PE=2 SV=1
Length = 312
Score = 53 bits (126), Expect = 2e-006
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Frame = +2
Query: 149 VFCGNFEYDAREGDLERLFRRYGKVDRVDMKAGFAFVYMENERDAEDAIRALDRYEYGRK 328
++ G E D+E FR YG++ V +K GF FV +++RDAEDA+ L+ E G
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELG-- 62
Query: 329 GRRLRVEWTKNERGAPVKSG 388
G R+ ++++K G + G
Sbjct: 63 GERVILDYSKPRGGGGDRGG 82
>sp|Q3MHX3|RBM4_BOVIN RNA-binding protein 4 OS=Bos taurus GN=RBM4 PE=2 SV=1
Length = 362
Score = 53 bits (125), Expect = 2e-006
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Frame = +2
Query: 140 MRPVFCGNFEYDAREGDLERLFRRYGKVDRVDMKAGFAFVYMENERDAEDAIRALDRYEY 319
M +F GN +A E ++ LF +YGKV D+ + FV++E++ AEDAIR L Y+
Sbjct: 1 MVKLFIGNLPREATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIRNLHHYKL 60
Query: 320 GRKGRRLRVEWTKNERGAPVK 382
G + VE +KN+ K
Sbjct: 61 --HGVNINVEASKNKSKTSTK 79
>sp|Q9BWF3|RBM4_HUMAN RNA-binding protein 4 OS=Homo sapiens GN=RBM4 PE=1 SV=1
Length = 364
Score = 53 bits (125), Expect = 2e-006
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Frame = +2
Query: 140 MRPVFCGNFEYDAREGDLERLFRRYGKVDRVDMKAGFAFVYMENERDAEDAIRALDRYEY 319
M +F GN +A E ++ LF +YGKV D+ + FV++E++ AEDAIR L Y+
Sbjct: 1 MVKLFIGNLPREATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIRNLHHYKL 60
Query: 320 GRKGRRLRVEWTKNERGAPVK 382
G + VE +KN+ K
Sbjct: 61 --HGVNINVEASKNKSKTSTK 79
>sp|Q4R979|RBM4_MACFA RNA-binding protein 4 OS=Macaca fascicularis GN=RBM4 PE=2
SV=1
Length = 364
Score = 53 bits (125), Expect = 2e-006
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Frame = +2
Query: 140 MRPVFCGNFEYDAREGDLERLFRRYGKVDRVDMKAGFAFVYMENERDAEDAIRALDRYEY 319
M +F GN +A E ++ LF +YGKV D+ + FV++E++ AEDAIR L Y+
Sbjct: 1 MVKLFIGNLPREATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIRNLHHYKL 60
Query: 320 GRKGRRLRVEWTKNERGAPVK 382
G + VE +KN+ K
Sbjct: 61 --HGVNINVEASKNKSKTSTK 79
>sp|P26686|SRR55_DROME Serine-arginine protein 55 OS=Drosophila melanogaster
GN=B52 PE=1 SV=4
Length = 376
Score = 51 bits (121), Expect = 7e-006
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = +2
Query: 149 VFCGNFEYDAREGDLERLFRRYGKVDRVDMKAGFAFVYMENERDAEDAIRALDRYEYGRK 328
V+ G Y RE DLER F+ YG+ + +K G+ FV E+ RDA+DA+ L+ E
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL--L 63
Query: 329 GRRLRVE 349
G R+ VE
Sbjct: 64 GERVVVE 70
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,663,141,639
Number of Sequences: 518415
Number of Extensions: 27663141639
Number of Successful Extensions: 195024468
Number of sequences better than 0.0: 0
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