BLASTX 7.6.2
Query= UN06952 /QuerySize=769
(768 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G52040.1 | Symbols: ATRSP41 | ATRSP41; RNA bin... 346 9e-096
TAIR9_protein||AT5G52040.2 | Symbols: ATRSP41 | ATRSP41; RNA bin... 346 9e-096
TAIR9_protein||AT4G25500.1 | Symbols: ATRSP35, ATRSP40, AT-SRP40... 338 3e-093
TAIR9_protein||AT5G52040.4 | Symbols: | ATRSP41; RNA binding / ... 280 1e-075
TAIR9_protein||AT5G52040.3 | Symbols: | ATRSP41; RNA binding / ... 277 5e-075
TAIR9_protein||AT4G25500.3 | Symbols: ATRSP35, ATRSP40, AT-SRP40... 269 2e-072
TAIR9_protein||AT4G25500.2 | Symbols: ATRSP35, ATRSP40, AT-SRP40... 256 1e-068
TAIR9_protein||AT3G61860.1 | Symbols: ATRSP31, RSP31 | RSP31; RN... 246 1e-065
TAIR9_protein||AT2G46610.1 | Symbols: | arginine/serine-rich sp... 223 2e-058
TAIR9_protein||AT2G46610.2 | Symbols: | arginine/serine-rich sp... 177 1e-044
TAIR9_protein||AT2G37340.1 | Symbols: RSZ33, ATRSZ33 | RSZ33; nu... 57 1e-008
TAIR9_protein||AT3G53500.2 | Symbols: RSZ32 | zinc knuckle (CCHC... 56 2e-008
>TAIR9_protein||AT5G52040.1 | Symbols: ATRSP41 | ATRSP41; RNA binding / nucleic
acid binding / nucleotide binding | chr5:21131081-21133318 FORWARD
Length = 357
Score = 346 bits (887), Expect = 9e-096
Identities = 170/189 (89%), Positives = 182/189 (96%), Gaps = 1/189 (0%)
Frame = +2
Query: 140 MRPVFCGNFEYDAREGDLERLFRRYGKVDRVDMKAGFAFVYMENERDAEDAIRALDRYEY 319
M+PVFCGNFEYDARE DLERLFR+YGKV+RVDMKAGFAFVYME+ERDAEDAIRALDR+EY
Sbjct: 1 MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60
Query: 320 GRKGRRLRVEWTKNERGAPVKSGGSRRSSS-LRPSKTLFVINFDAESTRTRDLERHFEPY 496
GR GRRLRVEWTKN+RG +SGGSRRSSS LRPSKTLFVINFDA++TRTRDLERHFEPY
Sbjct: 61 GRTGRRLRVEWTKNDRGGAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHFEPY 120
Query: 497 GKIVNVRIRRNFAFIQYELQEDATRALEATNSSKLMDKVISVEYAMKDDDARGNGYSPER 676
GKIVNVRIRRNFAFIQYE QEDATRAL+ATNSSKLMDKVISVEYA+KDDD+RGNGYSPER
Sbjct: 121 GKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYSPER 180
Query: 677 RRDRSPDRR 703
RRDRSPDRR
Sbjct: 181 RRDRSPDRR 189
>TAIR9_protein||AT5G52040.2 | Symbols: ATRSP41 | ATRSP41; RNA binding / nucleic
acid binding / nucleotide binding | chr5:21131081-21133318 FORWARD
Length = 358
Score = 346 bits (887), Expect = 9e-096
Identities = 170/189 (89%), Positives = 182/189 (96%), Gaps = 1/189 (0%)
Frame = +2
Query: 140 MRPVFCGNFEYDAREGDLERLFRRYGKVDRVDMKAGFAFVYMENERDAEDAIRALDRYEY 319
M+PVFCGNFEYDARE DLERLFR+YGKV+RVDMKAGFAFVYME+ERDAEDAIRALDR+EY
Sbjct: 1 MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60
Query: 320 GRKGRRLRVEWTKNERGAPVKSGGSRRSSS-LRPSKTLFVINFDAESTRTRDLERHFEPY 496
GR GRRLRVEWTKN+RG +SGGSRRSSS LRPSKTLFVINFDA++TRTRDLERHFEPY
Sbjct: 61 GRTGRRLRVEWTKNDRGGAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHFEPY 120
Query: 497 GKIVNVRIRRNFAFIQYELQEDATRALEATNSSKLMDKVISVEYAMKDDDARGNGYSPER 676
GKIVNVRIRRNFAFIQYE QEDATRAL+ATNSSKLMDKVISVEYA+KDDD+RGNGYSPER
Sbjct: 121 GKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYSPER 180
Query: 677 RRDRSPDRR 703
RRDRSPDRR
Sbjct: 181 RRDRSPDRR 189
>TAIR9_protein||AT4G25500.1 | Symbols: ATRSP35, ATRSP40, AT-SRP40, RSP35 |
ATRSP35; RNA binding / nucleic acid binding / nucleotide binding |
chr4:13025168-13027243 FORWARD
Length = 351
Score = 338 bits (865), Expect = 3e-093
Identities = 164/190 (86%), Positives = 182/190 (95%), Gaps = 2/190 (1%)
Frame = +2
Query: 140 MRPVFCGNFEYDAREGDLERLFRRYGKVDRVDMKAGFAFVYMENERDAEDAIRALDRYEY 319
M+PVFCGNFEYDAREGDLERLFR+YGKV+RVDMKAGFAFVYME+ERDAEDAIRALDR+E+
Sbjct: 1 MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60
Query: 320 GRKGRRLRVEWTKNERGAPVKSGGS--RRSSSLRPSKTLFVINFDAESTRTRDLERHFEP 493
GRKGRRLRVEWTK+ERG +SGG R SSS+RPSKTLFVINFDA++TRTRDLE+HFEP
Sbjct: 61 GRKGRRLRVEWTKSERGGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHFEP 120
Query: 494 YGKIVNVRIRRNFAFIQYELQEDATRALEATNSSKLMDKVISVEYAMKDDDARGNGYSPE 673
YGKIVNVRIRRNFAFIQYE QEDATRAL+A+N+SKLMDKVISVEYA+KDDDARGNG+SPE
Sbjct: 121 YGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHSPE 180
Query: 674 RRRDRSPDRR 703
RRRDRSP+RR
Sbjct: 181 RRRDRSPERR 190
>TAIR9_protein||AT5G52040.4 | Symbols: | ATRSP41; RNA binding / nucleic acid
binding / nucleotide binding | chr5:21131881-21133318 FORWARD
Length = 325
Score = 280 bits (714), Expect = 1e-075
Identities = 139/154 (90%), Positives = 148/154 (96%), Gaps = 1/154 (0%)
Frame = +2
Query: 245 GFAFVYMENERDAEDAIRALDRYEYGRKGRRLRVEWTKNERGAPVKSGGSRRSSS-LRPS 421
GFAFVYME+ERDAEDAIRALDR+EYGR GRRLRVEWTKN+RG +SGGSRRSSS LRPS
Sbjct: 3 GFAFVYMEDERDAEDAIRALDRFEYGRTGRRLRVEWTKNDRGGAGRSGGSRRSSSGLRPS 62
Query: 422 KTLFVINFDAESTRTRDLERHFEPYGKIVNVRIRRNFAFIQYELQEDATRALEATNSSKL 601
KTLFVINFDA++TRTRDLERHFEPYGKIVNVRIRRNFAFIQYE QEDATRAL+ATNSSKL
Sbjct: 63 KTLFVINFDAQNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKL 122
Query: 602 MDKVISVEYAMKDDDARGNGYSPERRRDRSPDRR 703
MDKVISVEYA+KDDD+RGNGYSPERRRDRSPDRR
Sbjct: 123 MDKVISVEYAVKDDDSRGNGYSPERRRDRSPDRR 156
>TAIR9_protein||AT5G52040.3 | Symbols: | ATRSP41; RNA binding / nucleic acid
binding / nucleotide binding | chr5:21131791-21133318 FORWARD
Length = 330
Score = 277 bits (708), Expect = 5e-075
Identities = 138/153 (90%), Positives = 147/153 (96%), Gaps = 1/153 (0%)
Frame = +2
Query: 248 FAFVYMENERDAEDAIRALDRYEYGRKGRRLRVEWTKNERGAPVKSGGSRRSSS-LRPSK 424
FAFVYME+ERDAEDAIRALDR+EYGR GRRLRVEWTKN+RG +SGGSRRSSS LRPSK
Sbjct: 10 FAFVYMEDERDAEDAIRALDRFEYGRTGRRLRVEWTKNDRGGAGRSGGSRRSSSGLRPSK 69
Query: 425 TLFVINFDAESTRTRDLERHFEPYGKIVNVRIRRNFAFIQYELQEDATRALEATNSSKLM 604
TLFVINFDA++TRTRDLERHFEPYGKIVNVRIRRNFAFIQYE QEDATRAL+ATNSSKLM
Sbjct: 70 TLFVINFDAQNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLM 129
Query: 605 DKVISVEYAMKDDDARGNGYSPERRRDRSPDRR 703
DKVISVEYA+KDDD+RGNGYSPERRRDRSPDRR
Sbjct: 130 DKVISVEYAVKDDDSRGNGYSPERRRDRSPDRR 162
>TAIR9_protein||AT4G25500.3 | Symbols: ATRSP35, ATRSP40, AT-SRP40 | ATRSP35; RNA
binding / nucleic acid binding / nucleotide binding |
chr4:13025850-13027243 FORWARD
Length = 318
Score = 269 bits (686), Expect = 2e-072
Identities = 132/155 (85%), Positives = 147/155 (94%), Gaps = 2/155 (1%)
Frame = +2
Query: 245 GFAFVYMENERDAEDAIRALDRYEYGRKGRRLRVEWTKNERGAPVKSGGS--RRSSSLRP 418
GFAFVYME+ERDAEDAIRALDR+E+GRKGRRLRVEWTK+ERG +SGG R SSS+RP
Sbjct: 3 GFAFVYMEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKRSGGGSRRSSSSMRP 62
Query: 419 SKTLFVINFDAESTRTRDLERHFEPYGKIVNVRIRRNFAFIQYELQEDATRALEATNSSK 598
SKTLFVINFDA++TRTRDLE+HFEPYGKIVNVRIRRNFAFIQYE QEDATRAL+A+N+SK
Sbjct: 63 SKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSK 122
Query: 599 LMDKVISVEYAMKDDDARGNGYSPERRRDRSPDRR 703
LMDKVISVEYA+KDDDARGNG+SPERRRDRSP+RR
Sbjct: 123 LMDKVISVEYAVKDDDARGNGHSPERRRDRSPERR 157
>TAIR9_protein||AT4G25500.2 | Symbols: ATRSP35, ATRSP40, AT-SRP40 | ATRSP35; RNA
binding / nucleic acid binding / nucleotide binding |
chr4:13026073-13027243 FORWARD
Length = 310
Score = 256 bits (653), Expect = 1e-068
Identities = 126/149 (84%), Positives = 141/149 (94%), Gaps = 2/149 (1%)
Frame = +2
Query: 263 MENERDAEDAIRALDRYEYGRKGRRLRVEWTKNERGAPVKSGGS--RRSSSLRPSKTLFV 436
ME+ERDAEDAIRALDR+E+GRKGRRLRVEWTK+ERG +SGG R SSS+RPSKTLFV
Sbjct: 1 MEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKRSGGGSRRSSSSMRPSKTLFV 60
Query: 437 INFDAESTRTRDLERHFEPYGKIVNVRIRRNFAFIQYELQEDATRALEATNSSKLMDKVI 616
INFDA++TRTRDLE+HFEPYGKIVNVRIRRNFAFIQYE QEDATRAL+A+N+SKLMDKVI
Sbjct: 61 INFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVI 120
Query: 617 SVEYAMKDDDARGNGYSPERRRDRSPDRR 703
SVEYA+KDDDARGNG+SPERRRDRSP+RR
Sbjct: 121 SVEYAVKDDDARGNGHSPERRRDRSPERR 149
>TAIR9_protein||AT3G61860.1 | Symbols: ATRSP31, RSP31 | RSP31; RNA binding /
nucleic acid binding / nucleotide binding | chr3:22900311-22902159
REVERSE
Length = 265
Score = 246 bits (627), Expect = 1e-065
Identities = 122/195 (62%), Positives = 150/195 (76%), Gaps = 11/195 (5%)
Frame = +2
Query: 140 MRPVFCGNFEYDAREGDLERLFRRYGKVDRVDMKAGFAFVYMENERDAEDAIRALDRYEY 319
MRPVF GNFEY+ R+ DLERLF +YG+VDRVDMK+G+AFVY E+ERDAEDAIR LD + +
Sbjct: 1 MRPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKSGYAFVYFEDERDAEDAIRKLDNFPF 60
Query: 320 GRKGRRLRVEWTKNERGAPVKSGGSRRSSSLRPSKTLFVINFDAESTRTRDLERHFEPYG 499
G + RRL VEW K ERG P G ++ S+L+P+KTLFVINFD T+ D+E+HFEPYG
Sbjct: 61 GYEKRRLSVEWAKGERGRP--RGDAKAPSNLKPTKTLFVINFDPIRTKEHDIEKHFEPYG 118
Query: 500 KIVNVRIRRNFAFIQYELQEDATRALEATNSSKLMDKVISVEYAMKDDDA---RGNGYSP 670
K+ NVRIRRNF+F+Q+E QEDAT+ALEAT SK++D+V+SVEYA+KDDD R G SP
Sbjct: 119 KVTNVRIRRNFSFVQFETQEDATKALEATQRSKILDRVVSVEYALKDDDERDDRNGGRSP 178
Query: 671 ER------RRDRSPD 697
R RR SPD
Sbjct: 179 RRSLSPVYRRRPSPD 193
>TAIR9_protein||AT2G46610.1 | Symbols: | arginine/serine-rich splicing factor,
putative | chr2:19136769-19138492 REVERSE
Length = 251
Score = 223 bits (566), Expect = 2e-058
Identities = 109/185 (58%), Positives = 142/185 (76%), Gaps = 1/185 (0%)
Frame = +2
Query: 140 MRPVFCGNFEYDAREGDLERLFRRYGKVDRVDMKAGFAFVYMENERDAEDAIRALDRYEY 319
MR V+ GNF+YD R DLERLF ++G+V RVDMK+G+AFVY E+ERDAEDAIR D +
Sbjct: 1 MRHVYVGNFDYDTRHSDLERLFSKFGRVKRVDMKSGYAFVYFEDERDAEDAIRRTDNTTF 60
Query: 320 GRKGRRLRVEWTKNERGAPVKSGGSRRSSSLRPSKTLFVINFDAESTRTRDLERHFEPYG 499
G R+L VEW K+ +G K + S+ RP+KTLFVINFD TR RD+ERHFEPYG
Sbjct: 61 GYGRRKLSVEWAKDFQGERGKPRDGKAVSNQRPTKTLFVINFDPIRTRERDMERHFEPYG 120
Query: 500 KIVNVRIRRNFAFIQYELQEDATRALEATNSSKLMDKVISVEYAMKDDDARGNGYSPERR 679
K++NVR+RRNFAF+Q+ QEDAT+AL++T++SKL+DKV+SVEYA+++ R + Y+ RR
Sbjct: 121 KVLNVRMRRNFAFVQFATQEDATKALDSTHNSKLLDKVVSVEYALREAGEREDRYAGSRR 180
Query: 680 RDRSP 694
R RSP
Sbjct: 181 R-RSP 184
>TAIR9_protein||AT2G46610.2 | Symbols: | arginine/serine-rich splicing factor,
putative | chr2:19136769-19137858 REVERSE
Length = 225
Score = 177 bits (447), Expect = 1e-044
Identities = 88/151 (58%), Positives = 115/151 (76%), Gaps = 1/151 (0%)
Frame = +2
Query: 242 AGFAFVYMENERDAEDAIRALDRYEYGRKGRRLRVEWTKNERGAPVKSGGSRRSSSLRPS 421
AG+AFVY E+ERDAEDAIR D +G R+L VEW K+ +G K + S+ RP+
Sbjct: 9 AGYAFVYFEDERDAEDAIRRTDNTTFGYGRRKLSVEWAKDFQGERGKPRDGKAVSNQRPT 68
Query: 422 KTLFVINFDAESTRTRDLERHFEPYGKIVNVRIRRNFAFIQYELQEDATRALEATNSSKL 601
KTLFVINFD TR RD+ERHFEPYGK++NVR+RRNFAF+Q+ QEDAT+AL++T++SKL
Sbjct: 69 KTLFVINFDPIRTRERDMERHFEPYGKVLNVRMRRNFAFVQFATQEDATKALDSTHNSKL 128
Query: 602 MDKVISVEYAMKDDDARGNGYSPERRRDRSP 694
+DKV+SVEYA+++ R + Y+ RRR RSP
Sbjct: 129 LDKVVSVEYALREAGEREDRYAGSRRR-RSP 158
>TAIR9_protein||AT2G37340.1 | Symbols: RSZ33, ATRSZ33 | RSZ33; nucleic acid
binding / nucleotide binding / zinc ion binding |
chr2:15670372-15672331 REVERSE
Length = 291
Score = 57 bits (136), Expect = 1e-008
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Frame = +2
Query: 149 VFCGNFEYDAREGDLERLFRRYGKVDRVDMKAGFAFVYMENERDAEDAIRALDRYEYGRK 328
++ G R DLERLF RYG+V VDMK +AFV + RDA+DA LD ++
Sbjct: 13 LYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFGDPRDADDARHYLDGRDF--D 70
Query: 329 GRRLRVEWTKNERGAP 376
G R+ VE++ RGAP
Sbjct: 71 GSRITVEFS---RGAP 83
>TAIR9_protein||AT3G53500.2 | Symbols: RSZ32 | zinc knuckle (CCHC-type) family
protein | chr3:19834557-19836507 REVERSE
Length = 285
Score = 56 bits (134), Expect = 2e-008
Identities = 37/85 (43%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Frame = +2
Query: 149 VFCGNFEYDAREGDLERLFRRYGKVDRVDMKAGFAFVYMENERDAEDAIRALDRYEYGRK 328
++ G R DLERLF RYG+V VDMK +AFV + RDA+DA LD ++
Sbjct: 13 LYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFSDPRDADDARYYLDGRDF--D 70
Query: 329 GRRLRVEWTKNERGAP--VKSGGSR 397
G R+ VE RGAP + GSR
Sbjct: 71 GSRITVE---ASRGAPRGSRDNGSR 92
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,175,170,284
Number of Sequences: 33410
Number of Extensions: 4175170284
Number of Successful Extensions: 158200266
Number of sequences better than 0.0: 0
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