Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN06961


BLASTX 7.6.2

Query= UN06961 /QuerySize=1086
        (1085 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT4G33350.1 | Symbols:  | chloroplast inner membr...    444   5e-125
TAIR9_protein||AT3G23710.1 | Symbols:  | chloroplast inner membr...    146   2e-035

>TAIR9_protein||AT4G33350.1 | Symbols:  | chloroplast inner membrane import
        protein Tic22, putative | chr4:16064638-16066715 REVERSE

          Length = 269

 Score =  444 bits (1141), Expect = 5e-125
 Identities = 234/270 (86%), Positives = 248/270 (91%), Gaps = 8/270 (2%)
 Frame = +3

Query:  54 SSVKPNPFL---TFLHHHCNRFTSDLSSRFQDTTKRFAESLTTRRFSLIIPPPPPFASVS 224
           SSVKPNPFL   +F+HH C RF+SDLS+R +D TKRFAE+L TRRFSL  P PPPFASVS
Sbjct:   3 SSVKPNPFLSFSSFIHHQCTRFSSDLSARIED-TKRFAETLATRRFSL--PTPPPFASVS 59

Query: 225 QS-SSKPSTTLNPSHVAKALAGTSVFTVSNTNNEFVLISDPTGDKSIGLLCFRQEDAEAL 401
           QS S  P+TTL+PS VAKALAGTSVFTVSNTNNEFVLISDPTG KSIGLLCFRQEDAEA 
Sbjct:  60 QSKSGTPTTTLSPSLVAKALAGTSVFTVSNTNNEFVLISDPTGGKSIGLLCFRQEDAEAF 119

Query: 402 LAQARLRRRGLKTNAKVVPINLDQVYLLKVEGISFRFLPDPIQIKNALDLKSSSSKNGFD 581
           LAQARLRRR LKTNAKVVPI LDQVYLLKVEGISFRFLPDPIQIKNAL+LKSS +KNGFD
Sbjct: 120 LAQARLRRRELKTNAKVVPITLDQVYLLKVEGISFRFLPDPIQIKNALELKSSGNKNGFD 179

Query: 582 GVPVFQSELLVVRKKNKRYCPVYFSKEDIERELLSKYSRASRGDQQIMVGSLEDVLRKME 761
           GVPVFQSELLVVRKKN+RYCPVYFSKEDIERE LSKY+RASRGDQQIMVGSLEDVLRKME
Sbjct: 180 GVPVFQSELLVVRKKNRRYCPVYFSKEDIERE-LSKYTRASRGDQQIMVGSLEDVLRKME 238

Query: 762 RSEKNSGWEDVIFIPPGRSYAQHMQEVIKE 851
            SEKNSGWEDVIFIPPGRSYAQHMQ++IKE
Sbjct: 239 MSEKNSGWEDVIFIPPGRSYAQHMQDLIKE 268

>TAIR9_protein||AT3G23710.1 | Symbols:  | chloroplast inner membrane import
        protein Tic22, putative | chr3:8534061-8536148 FORWARD

          Length = 314

 Score =  146 bits (368), Expect = 2e-035
 Identities = 81/197 (41%), Positives = 125/197 (63%), Gaps = 13/197 (6%)
 Frame = +3

Query: 252 LNPSHVAKALAGTSVFTVSNTNNEFVLISDPTGDKSIGLLCFRQEDAEALLAQAR-LRRR 428
           L+   + + LAG  V+ +SN+N EFVL+S  +  KS+GLL  ++EDAE LL + + +  R
Sbjct: 110 LSADAIEERLAGVPVYALSNSNEEFVLVSGTSSGKSLGLLFCKEEDAETLLKEMKSMDPR 169

Query: 429 GLKTNAKVVPINLDQVYLLKVEGISFRFLPDPIQIKNALDLKSSS--SKNGFDGVPVFQS 602
             K  +KVV + L +V+ LKV G++FR +P+  Q+KNAL  + ++    + F GVPVFQS
Sbjct: 170 MRKEGSKVVALALSKVFQLKVNGVAFRLIPESTQVKNALKERKTAGIDDDDFHGVPVFQS 229

Query: 603 ELLVVRKKNKRYCPVYFSKEDIERELLSKYSRASR-------GDQQIMVGSLEDVLRKME 761
           + L++R +N  Y PV+F KED+E+ L+   S+ +R       GD Q+ V   ED+++ M 
Sbjct: 230 KSLILRSENMSYRPVFFRKEDLEKSLIRASSQQNRLNPALKPGDIQVAV--FEDIVKGM- 286

Query: 762 RSEKNSGWEDVIFIPPG 812
           R    S W+D++FIPPG
Sbjct: 287 RESTTSNWDDIVFIPPG 303

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,175,170,284
Number of Sequences: 33410
Number of Extensions: 4175170284
Number of Successful Extensions: 158200266
Number of sequences better than 0.0: 0