BLASTX 7.6.2
Query= UN07087 /QuerySize=973
(972 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q7T320|GORAB_DANRE RAB6-interacting golgin OS=Danio rerio GN=... 56 3e-007
sp|B1H222|GORAB_RAT RAB6-interacting golgin OS=Rattus norvegicus... 56 3e-007
sp|A5PKK7|GORAB_BOVIN RAB6-interacting golgin OS=Bos taurus GN=G... 55 7e-007
sp|Q8BRM2|GORAB_MOUSE RAB6-interacting golgin OS=Mus musculus GN... 55 7e-007
sp|Q5T7V8|GORAB_HUMAN RAB6-interacting golgin OS=Homo sapiens GN... 55 9e-007
sp|Q0VF96|CGNL1_HUMAN Cingulin-like protein 1 OS=Homo sapiens GN... 51 1e-005
>sp|Q7T320|GORAB_DANRE RAB6-interacting golgin OS=Danio rerio GN=gorab PE=2
SV=1
Length = 336
Score = 56 bits (134), Expect = 3e-007
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 4/165 (2%)
Frame = +2
Query: 203 AEPPQPQSNEMVLHTGSLSFSSHMSKEDEEMTRSALSAF----RAKEEEIDKRRMEVRER 370
AEP +P V F +E E ++ L R EE+ KR+ + +
Sbjct: 101 AEPVKPDPASPVQSIPPADFKELDKQEVELREKNRLQQLQWEQRIMEEKNKKRKALLTKT 160
Query: 371 IQAQLGRVEEETRRLSTIREELETMADPMRKEVSMVRKKIDSVNKELKPLGSTVQKKERE 550
I + + + E +L I+ EL+ + D + ++ ++RK I+ + + +K E E
Sbjct: 161 IAEKSKQTQAEAIKLKKIQRELQVLDDSVSSDIGVLRKLIEQSSMDYSLAWKRFEKAEAE 220
Query: 551 YKEALDTFNEKNREKVQLITKLMELVGESEKLRLKKLEELSKSIE 685
Y A + K K QL L ++ ++E + +KLEEL +E
Sbjct: 221 YVAAKMDLHRKTEVKEQLTEHLCAIIQQNELRKARKLEELMLQLE 265
>sp|B1H222|GORAB_RAT RAB6-interacting golgin OS=Rattus norvegicus GN=Gorab PE=2
SV=2
Length = 368
Score = 56 bits (134), Expect = 3e-007
Identities = 31/122 (25%), Positives = 61/122 (50%)
Frame = +2
Query: 320 RAKEEEIDKRRMEVRERIQAQLGRVEEETRRLSTIREELETMADPMRKEVSMVRKKIDSV 499
R EE+ +++ + + I + R + ET +L I++EL+ + D + ++ ++R +ID
Sbjct: 154 RLMEEKNKRKKALLAQAIAERSRRTQAETMKLKRIQKELQALDDMVSADIGILRNRIDQA 213
Query: 500 NKELKPLGSTVQKKEREYKEALDTFNEKNREKVQLITKLMELVGESEKLRLKKLEELSKS 679
+ E + E EY A K K QL L ++ ++E + +KLEEL +
Sbjct: 214 SLEYSYARKRFDRAEAEYVTAKLDLQRKTETKEQLTEHLCTIIQQNELRKAQKLEELMRQ 273
Query: 680 IE 685
++
Sbjct: 274 LD 275
>sp|A5PKK7|GORAB_BOVIN RAB6-interacting golgin OS=Bos taurus GN=GORAB PE=2 SV=2
Length = 370
Score = 55 bits (131), Expect = 7e-007
Identities = 31/122 (25%), Positives = 61/122 (50%)
Frame = +2
Query: 320 RAKEEEIDKRRMEVRERIQAQLGRVEEETRRLSTIREELETMADPMRKEVSMVRKKIDSV 499
R EE+ +++ + + I + R + ET +L I++EL+ + D + ++ ++R +ID
Sbjct: 151 RLMEEKNKRKKALLAKAIAERSKRTQAETMKLKRIQKELQALDDMVSADIGILRNRIDQA 210
Query: 500 NKELKPLGSTVQKKEREYKEALDTFNEKNREKVQLITKLMELVGESEKLRLKKLEELSKS 679
+ + + E EY A K K QL L ++ ++E + KKLEEL +
Sbjct: 211 SLDYSYARKRFDRAEAEYVTAKLELQRKTELKEQLTEHLCTIIQQNELRKAKKLEELMQQ 270
Query: 680 IE 685
++
Sbjct: 271 LD 272
>sp|Q8BRM2|GORAB_MOUSE RAB6-interacting golgin OS=Mus musculus GN=Gorab PE=1
SV=1
Length = 368
Score = 55 bits (131), Expect = 7e-007
Identities = 31/122 (25%), Positives = 61/122 (50%)
Frame = +2
Query: 320 RAKEEEIDKRRMEVRERIQAQLGRVEEETRRLSTIREELETMADPMRKEVSMVRKKIDSV 499
R EE+ +++ + + I + + + ET +L I++EL+ + D + ++ ++R +ID
Sbjct: 154 RLMEEKNKRKKALLAQAIAERSKKTQAETIKLKRIQKELQALDDMVSADIGILRNRIDQA 213
Query: 500 NKELKPLGSTVQKKEREYKEALDTFNEKNREKVQLITKLMELVGESEKLRLKKLEELSKS 679
+ E + E EY A K K QL L ++ ++E + KKLEEL +
Sbjct: 214 SLEYSYARKRFDRAEAEYITAKLDLQRKTETKEQLTEHLCTIIQQNELRKAKKLEELMQQ 273
Query: 680 IE 685
++
Sbjct: 274 LD 275
>sp|Q5T7V8|GORAB_HUMAN RAB6-interacting golgin OS=Homo sapiens GN=GORAB PE=1
SV=1
Length = 394
Score = 55 bits (130), Expect = 9e-007
Identities = 31/122 (25%), Positives = 61/122 (50%)
Frame = +2
Query: 320 RAKEEEIDKRRMEVRERIQAQLGRVEEETRRLSTIREELETMADPMRKEVSMVRKKIDSV 499
R EE+ +++ + + I + R + ET +L I++EL+ + D + ++ ++R +ID
Sbjct: 179 RLMEEKNKRKKALLAKAIAERSKRTQAETMKLKRIQKELQALDDMVSADIGILRNRIDQA 238
Query: 500 NKELKPLGSTVQKKEREYKEALDTFNEKNREKVQLITKLMELVGESEKLRLKKLEELSKS 679
+ + + E EY A K K QL L ++ ++E + KKLEEL +
Sbjct: 239 SLDYSYARKRFDRAEAEYIAAKLDIQRKTEIKEQLTEHLCTIIQQNELRKAKKLEELMQQ 298
Query: 680 IE 685
++
Sbjct: 299 LD 300
>sp|Q0VF96|CGNL1_HUMAN Cingulin-like protein 1 OS=Homo sapiens GN=CGNL1 PE=1
SV=1
Length = 1302
Score = 51 bits (121), Expect = 1e-005
Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 6/133 (4%)
Frame = +2
Query: 269 HMSKEDEEMTRSALSAFRAKEEEIDKRRMEVRERIQAQLGRVEEETRRLSTIREELETMA 448
H KE++E A+SA RA E E++ + + + Q Q ++ E+ + S +E+L +
Sbjct: 882 HARKEEKE----AVSARRALENELEAAQGNLSQTTQEQ-KQLSEKLKEESEQKEQLRRLK 936
Query: 449 DPMRKEVSMVRKKIDSVNKELKPLGSTVQKKEREYKEALDTFNEKN-REKVQLITKLMEL 625
+ M E + K I+ + KE+ + + E + LD + EKN RE ++ +L E
Sbjct: 937 NEMENERWHLGKTIEKLQKEMADIVEASRTSTLELQNQLDEYKEKNRRELAEMQRQLKEK 996
Query: 626 VGESEKLRLKKLE 664
E+EK RL ++
Sbjct: 997 TLEAEKSRLTAMK 1009
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,192,874,939
Number of Sequences: 518415
Number of Extensions: 28192874939
Number of Successful Extensions: 206273624
Number of sequences better than 0.0: 0
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