BLASTX 7.6.2
Query= UN07238 /QuerySize=1107
(1106 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297834182|ref|XP_002884973.1| hypothetical protein ARALYDRAFT... 462 5e-128
gi|15231285|ref|NP_187966.1| SC35-like splicing factor 30A [Arab... 461 1e-127
gi|9843661|emb|CAC03604.1| SC35-like splicing factor SCL30a, 30a... 450 2e-124
gi|240254272|ref|NP_564685.4| SC35-like splicing factor 33 [Arab... 369 4e-100
gi|15293081|gb|AAK93651.1| unknown protein [Arabidopsis thaliana] 369 8e-100
gi|297847894|ref|XP_002891828.1| hypothetical protein ARALYDRAFT... 362 5e-098
gi|240254274|ref|NP_001031195.4| SC35-like splicing factor 33 [A... 337 2e-090
gi|12323160|gb|AAG51556.1|AC027034_2 unknown protein; 47745-4592... 336 5e-090
gi|255582554|ref|XP_002532060.1| serine/arginine rich splicing f... 324 2e-086
gi|225435731|ref|XP_002285703.1| PREDICTED: hypothetical protein... 321 1e-085
gi|255635455|gb|ACU18080.1| unknown [Glycine max] 294 2e-077
gi|255644989|gb|ACU22994.1| unknown [Glycine max] 293 5e-077
gi|297722159|ref|NP_001173443.1| Os03g0374575 [Oryza sativa Japo... 271 2e-070
gi|108708411|gb|ABF96206.1| RNA recognition motif family protein... 267 2e-069
gi|31249706|gb|AAP46199.1| putative splicing factor [Oryza sativ... 266 5e-069
gi|255581554|ref|XP_002531582.1| serine/arginine rich splicing f... 263 4e-068
gi|212723388|ref|NP_001131976.1| hypothetical protein LOC1001933... 244 3e-062
gi|242035637|ref|XP_002465213.1| hypothetical protein SORBIDRAFT... 240 4e-061
gi|195631119|gb|ACG36660.1| splicing factor, arginine/serine-ric... 233 5e-059
gi|194688600|gb|ACF78384.1| unknown [Zea mays] 232 1e-058
>gi|297834182|ref|XP_002884973.1| hypothetical protein ARALYDRAFT_478747
[Arabidopsis lyrata subsp. lyrata]
Length = 262
Score = 462 bits (1188), Expect = 5e-128
Identities = 235/265 (88%), Positives = 242/265 (91%), Gaps = 10/265 (3%)
Frame = -2
Query: 1000 RSYTPSPPRGYGRRGRSPSPRGGSRYGGGGRDRDLPTSLLVRNLRHDCRQEDLRRPFEQF 821
RSYTPSPPRGYGRRGRSPSPRG RY GG RDRDLPTSLLVRNLRHDCRQEDLRRPFEQF
Sbjct: 4 RSYTPSPPRGYGRRGRSPSPRG--RY-GGSRDRDLPTSLLVRNLRHDCRQEDLRRPFEQF 60
Query: 820 GPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMEGYLLLGRELTVVFAEENRKKP 641
GPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHM+G LLGRELTVVFAEENRKKP
Sbjct: 61 GPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMDGSHLLGRELTVVFAEENRKKP 120
Query: 640 TEMRTRDRGGRSNRFNDRRRSPPRYSRSPPPRRGGRTRSRSRDYNSPPPKRHQSRSVSPQ 461
TEMRTRDRGGRSNRFNDRRRSPPRYSRSPPPRRG R+RSRSR Y+SP KRHQSRSVSPQ
Sbjct: 121 TEMRTRDRGGRSNRFNDRRRSPPRYSRSPPPRRGRRSRSRSRGYDSPSAKRHQSRSVSPQ 180
Query: 460 ERRYEKERSYSRSPPRNGSRARSGSREKVKKSYSRSRSPRRSVSPRRNRSYTPEQAR--S 287
+RRYEKERSYSRSPP NGSR RSGS +VK S SRSPRRSVSPRRNRSYTPEQAR S
Sbjct: 181 DRRYEKERSYSRSPPHNGSRIRSGSPGRVK---SHSRSPRRSVSPRRNRSYTPEQARSQS 237
Query: 286 PVPRQSRSPS--PRGERNGDRSPSQ 218
PVPRQSRSP+ PRG +NGDRSPSQ
Sbjct: 238 PVPRQSRSPTPVPRGAQNGDRSPSQ 262
>gi|15231285|ref|NP_187966.1| SC35-like splicing factor 30A [Arabidopsis
thaliana]
Length = 262
Score = 461 bits (1184), Expect = 1e-127
Identities = 232/265 (87%), Positives = 242/265 (91%), Gaps = 10/265 (3%)
Frame = -2
Query: 1000 RSYTPSPPRGYGRRGRSPSPRGGSRYGGGGRDRDLPTSLLVRNLRHDCRQEDLRRPFEQF 821
RSYTPSPPRGYGRRGRSPSPRG R+ GG RD DLPTSLLVRNLRHDCRQEDLRRPFEQF
Sbjct: 4 RSYTPSPPRGYGRRGRSPSPRG--RF-GGSRDSDLPTSLLVRNLRHDCRQEDLRRPFEQF 60
Query: 820 GPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMEGYLLLGRELTVVFAEENRKKP 641
GPVKDIYLPRDYYTGDPRGFGFIQ++DPADAAEAKH M+GYLLLGRELTVVFAEENRKKP
Sbjct: 61 GPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVVFAEENRKKP 120
Query: 640 TEMRTRDRGGRSNRFNDRRRSPPRYSRSPPPRRGGRTRSRSRDYNSPPPKRHQSRSVSPQ 461
TEMRTRDRGGRSNRF DRRRSPPRYSRSPPPRRG R+RSRSR YNSPP KRHQSRSVSPQ
Sbjct: 121 TEMRTRDRGGRSNRFQDRRRSPPRYSRSPPPRRGRRSRSRSRGYNSPPAKRHQSRSVSPQ 180
Query: 460 ERRYEKERSYSRSPPRNGSRARSGSREKVKKSYSRSRSPRRSVSPRRNRSYTPEQAR--S 287
+RRYEKERSYSRSPP NGSR RSGS +VK S SRSPRRSVSPR+NRSYTPEQAR S
Sbjct: 181 DRRYEKERSYSRSPPHNGSRVRSGSPGRVK---SHSRSPRRSVSPRKNRSYTPEQARSQS 237
Query: 286 PVPRQSRSPS--PRGERNGDRSPSQ 218
PVPRQSRSP+ PRG +NGDRSPSQ
Sbjct: 238 PVPRQSRSPTPVPRGAQNGDRSPSQ 262
>gi|9843661|emb|CAC03604.1| SC35-like splicing factor SCL30a, 30a kD
[Arabidopsis thaliana]
Length = 261
Score = 450 bits (1157), Expect = 2e-124
Identities = 230/265 (86%), Positives = 240/265 (90%), Gaps = 11/265 (4%)
Frame = -2
Query: 1000 RSYTPSPPRGYGRRGRSPSPRGGSRYGGGGRDRDLPTSLLVRNLRHDCRQEDLRRPFEQF 821
RSYTPSPPRGYGRRGRSPSPRG R+ GG RD DLPTSLLVRNLRHDCRQEDLRRPFEQF
Sbjct: 4 RSYTPSPPRGYGRRGRSPSPRG--RF-GGSRDSDLPTSLLVRNLRHDCRQEDLRRPFEQF 60
Query: 820 GPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMEGYLLLGRELTVVFAEENRKKP 641
GPVKDIYLPRDYYTGDPRGFGFIQ++DPADAAEAKH M+GYLLLGRELTVVFAEENRKKP
Sbjct: 61 GPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVVFAEENRKKP 120
Query: 640 TEMRTRDRGGRSNRFNDRRRSPPRYSRSPPPRRGGRTRSRSRDYNSPPPKRHQSRSVSPQ 461
TEMRTRDRGGRSNRF DRRRSPPRYSRS PPRRG R+RSRS YNSPP KRHQSRSVSPQ
Sbjct: 121 TEMRTRDRGGRSNRFQDRRRSPPRYSRS-PPRRGRRSRSRSCGYNSPPAKRHQSRSVSPQ 179
Query: 460 ERRYEKERSYSRSPPRNGSRARSGSREKVKKSYSRSRSPRRSVSPRRNRSYTPEQAR--S 287
+RRYEKERSYSRSPP NGSR RSGS +VK S SRSPRRSVSPR+NRSYTPEQAR S
Sbjct: 180 DRRYEKERSYSRSPPHNGSRVRSGSPGRVK---SHSRSPRRSVSPRKNRSYTPEQARSQS 236
Query: 286 PVPRQSRSPS--PRGERNGDRSPSQ 218
PVPRQSRSP+ PRG +NGDRSPSQ
Sbjct: 237 PVPRQSRSPTPVPRGAQNGDRSPSQ 261
>gi|240254272|ref|NP_564685.4| SC35-like splicing factor 33 [Arabidopsis
thaliana]
Length = 287
Score = 369 bits (947), Expect = 4e-100
Identities = 194/262 (74%), Positives = 217/262 (82%), Gaps = 13/262 (4%)
Frame = -2
Query: 997 SYTPSPPRGYGRRGRSPSPRGGSRYGGGGRDRDLPTSLLVRNLRHDCRQEDLRRPFEQFG 818
SYTPSPPRGYGRRGRSPSPRG RY GGR RDLPTSLLVRNLRHDCRQEDLR+ FEQFG
Sbjct: 5 SYTPSPPRGYGRRGRSPSPRG--RY--GGRSRDLPTSLLVRNLRHDCRQEDLRKSFEQFG 60
Query: 817 PVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMEGYLLLGRELTVVFAEENRKKPT 638
PVKDIYLPRDYYTGDPRGFGF+Q++DPADAA+AKHHM+GYLLLGRELTVVFAEENRKKPT
Sbjct: 61 PVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPT 120
Query: 637 EMRTRDRGGRSNRFNDRRRSPPRY---SRSPPPRRGGRTRSRSRDYNSPPPKRHQSRSVS 467
EMR R+RGG RF DRRR+PPRY SRSPPPRR GR+RSRS DY SPPP+RH RS+S
Sbjct: 121 EMRARERGG--GRFRDRRRTPPRYYSRSRSPPPRR-GRSRSRSGDYYSPPPRRHHPRSIS 177
Query: 466 PQERRYEKERSYSRSPPRNGSRARSGSREKVKKSYSRSRSPRRSV--SPRRNRSYTPEQA 293
P+E RY+ RSYSRSP +GSR RS + + KS S S SPRRS+ SPRR+RS +P++
Sbjct: 178 PREERYDGRRSYSRSPASDGSRGRSLTPVR-GKSRSLSPSPRRSISRSPRRSRSPSPKRN 236
Query: 292 RSPVPRQSRSPSPRGERNGDRS 227
RS PR+S S SPR R+ RS
Sbjct: 237 RSVSPRRSISRSPRRSRSPRRS 258
>gi|15293081|gb|AAK93651.1| unknown protein [Arabidopsis thaliana]
Length = 263
Score = 369 bits (945), Expect = 8e-100
Identities = 194/267 (72%), Positives = 218/267 (81%), Gaps = 15/267 (5%)
Frame = -2
Query: 997 SYTPSPPRGYGRRGRSPSPRGGSRYGGGGRDRDLPTSLLVRNLRHDCRQEDLRRPFEQFG 818
SYTPSPPRGYGRRGRSPSPRG RY GGR RDLPTSLLVRNLRHDCRQEDLR+ FEQFG
Sbjct: 5 SYTPSPPRGYGRRGRSPSPRG--RY--GGRSRDLPTSLLVRNLRHDCRQEDLRKSFEQFG 60
Query: 817 PVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMEGYLLLGRELTVVFAEENRKKPT 638
PVKDIYLPRDYYTGDPRGFGF+Q++DPADAA+AKHHM+GYLLLGRELTVVFAEENRKKPT
Sbjct: 61 PVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPT 120
Query: 637 EMRTRDRGGRSNRFNDRRRSPPRY---SRSPPPRRGGRTRSRSRDYNSPPPKRHQSRSVS 467
EMR R+RGG RF DRRR+PPRY SRSPPPRR GR+RSRS DY SPPP+RH RS+S
Sbjct: 121 EMRARERGG--GRFRDRRRTPPRYYSRSRSPPPRR-GRSRSRSGDYYSPPPRRHHPRSIS 177
Query: 466 PQERRYEKERSYSRSPPRNGSRARSGSREKVKKSYSRSRSPRRSVSPRRNRSYTPEQAR- 290
P+E RY+ RSYSRSP +GSR RS + + KS S S SPRRS+S RS +P ++R
Sbjct: 178 PREERYDGRRSYSRSPASDGSRGRSLTPVR-GKSRSLSPSPRRSISRSPRRSRSPRRSRR 236
Query: 289 --SPVPRQSRSPSPR-GERNGDRSPSQ 218
+P P +SRS SP G+ + DRSPSQ
Sbjct: 237 SYTPEPARSRSQSPHGGQYDEDRSPSQ 263
>gi|297847894|ref|XP_002891828.1| hypothetical protein ARALYDRAFT_892527
[Arabidopsis lyrata subsp. lyrata]
Length = 289
Score = 362 bits (929), Expect = 5e-098
Identities = 192/264 (72%), Positives = 217/264 (82%), Gaps = 10/264 (3%)
Frame = -2
Query: 997 SYTPSPPRGYGRRGRSPSPRGGSRYGGGGRDRDLPTSLLVRNLRHDCRQEDLRRPFEQFG 818
SYTPSPPRGYGRRGRSPSPRG RY GGR RDLPTSLLVRNLRHDCRQEDLR+ FEQFG
Sbjct: 5 SYTPSPPRGYGRRGRSPSPRG--RY--GGRSRDLPTSLLVRNLRHDCRQEDLRKSFEQFG 60
Query: 817 PVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMEGYLLLGRELTVVFAEENRKKPT 638
PVKDIYLPRDYYTGDPRGFGF+Q++DPADAA+AKHHM+GYLLLGRELTVVFAEENRKKPT
Sbjct: 61 PVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPT 120
Query: 637 EMRTRDR-GGRSNRFNDRRRSPPR-YSRS-PPPRRGGRTRSRSRDYNSPPPKRHQSRSVS 467
EMR R+R GGRS+RF DRRR+PPR YSRS PPRR R+RSRS DY SPPP+RH RS+S
Sbjct: 121 EMRARERGGGRSSRFRDRRRTPPRYYSRSRSPPRRRDRSRSRSGDYYSPPPRRHHPRSIS 180
Query: 466 PQERRYEKERSYSRSPPRNGSRARSGSREKVKKSYSRSRSPRRSV--SPRRNRSYTPEQA 293
P+E RY+ RSYSRSP NGSR RS + + S + S SP+RS+ SPRR+RS + ++
Sbjct: 181 PREERYDGRRSYSRSPASNGSRGRSLTPAR-GNSRNLSPSPKRSISRSPRRSRSPSLKRN 239
Query: 292 RSPVPRQSRSPSPRGERNGDRSPS 221
RS PR+S S SPR R+ RS S
Sbjct: 240 RSLSPRRSISRSPRRSRSPRRSRS 263
>gi|240254274|ref|NP_001031195.4| SC35-like splicing factor 33 [Arabidopsis
thaliana]
Length = 220
Score = 337 bits (863), Expect = 2e-090
Identities = 172/221 (77%), Positives = 188/221 (85%), Gaps = 13/221 (5%)
Frame = -2
Query: 997 SYTPSPPRGYGRRGRSPSPRGGSRYGGGGRDRDLPTSLLVRNLRHDCRQEDLRRPFEQFG 818
SYTPSPPRGYGRRGRSPSPRG RY GGR RDLPTSLLVRNLRHDCRQEDLR+ FEQFG
Sbjct: 5 SYTPSPPRGYGRRGRSPSPRG--RY--GGRSRDLPTSLLVRNLRHDCRQEDLRKSFEQFG 60
Query: 817 PVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMEGYLLLGRELTVVFAEENRKKPT 638
PVKDIYLPRDYYTGDPRGFGF+Q++DPADAA+AKHHM+GYLLLGRELTVVFAEENRKKPT
Sbjct: 61 PVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPT 120
Query: 637 EMRTRDRGGRSNRFNDRRRSPPRY---SRSPPPRRGGRTRSRSRDYNSPPPKRHQSRSVS 467
EMR R+RGG RF DRRR+PPRY SRSPPPRR GR+RSRS DY SPPP+RH RS+S
Sbjct: 121 EMRARERGG--GRFRDRRRTPPRYYSRSRSPPPRR-GRSRSRSGDYYSPPPRRHHPRSIS 177
Query: 466 PQERRYEKERSYSRSPPRNGSRARSGSREKVKKSYSRSRSP 344
P+E RY+ RSYSRSP +GSR RS + + K SRS SP
Sbjct: 178 PREERYDGRRSYSRSPASDGSRGRSLTPVRGK---SRSLSP 215
>gi|12323160|gb|AAG51556.1|AC027034_2 unknown protein; 47745-45927 [Arabidopsis
thaliana]
Length = 220
Score = 336 bits (860), Expect = 5e-090
Identities = 171/221 (77%), Positives = 188/221 (85%), Gaps = 13/221 (5%)
Frame = -2
Query: 997 SYTPSPPRGYGRRGRSPSPRGGSRYGGGGRDRDLPTSLLVRNLRHDCRQEDLRRPFEQFG 818
SYTPSPPRGYGRRGRSPSPRG RY GGR RDLPTSLLVRNLRHDCRQEDLR+ FEQFG
Sbjct: 5 SYTPSPPRGYGRRGRSPSPRG--RY--GGRSRDLPTSLLVRNLRHDCRQEDLRKSFEQFG 60
Query: 817 PVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMEGYLLLGRELTVVFAEENRKKPT 638
PVKDIYLPRDYYTGDPRGFGF+Q++DPADAA+AKHHM+GYLLLGRELTVVFAEENRKKPT
Sbjct: 61 PVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPT 120
Query: 637 EMRTRDRGGRSNRFNDRRRSPPRY---SRSPPPRRGGRTRSRSRDYNSPPPKRHQSRSVS 467
EMR R+RGG RF DRRR+PPRY SRSPPPRR GR+RSRS DY SPPP+RH RS+S
Sbjct: 121 EMRARERGG--GRFRDRRRTPPRYYSRSRSPPPRR-GRSRSRSGDYYSPPPRRHHPRSIS 177
Query: 466 PQERRYEKERSYSRSPPRNGSRARSGSREKVKKSYSRSRSP 344
P+E RY+ RSYSRSP +GSR RS + + K SRS +P
Sbjct: 178 PREERYDGRRSYSRSPASDGSRGRSLTPVRGK---SRSLTP 215
>gi|255582554|ref|XP_002532060.1| serine/arginine rich splicing factor, putative
[Ricinus communis]
Length = 246
Score = 324 bits (829), Expect = 2e-086
Identities = 172/244 (70%), Positives = 191/244 (78%), Gaps = 12/244 (4%)
Frame = -2
Query: 1009 MRGRSYTPS-PPRGYGRR-GRSPSPRGGSRYGGGGR--DRDLPTSLLVRNLRHDCRQEDL 842
MRGRSY+PS PPRGYGRR GRS SPRG R+GGGGR RDLPTSLLVRNLRHDCR EDL
Sbjct: 1 MRGRSYSPSPPPRGYGRRGGRSRSPRG--RHGGGGRGGGRDLPTSLLVRNLRHDCRPEDL 58
Query: 841 RRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMEGYLLLGRELTVVFA 662
RRPFEQFG +KDIYLPRDYYTG+PRGFGF+QY DP DAAEAKHHM+G +LLGRELTVVFA
Sbjct: 59 RRPFEQFGALKDIYLPRDYYTGEPRGFGFVQYADPQDAAEAKHHMDGRVLLGRELTVVFA 118
Query: 661 EENRKKPTEMRTRDRGGRSNRFNDRRRSPPRYSRSPPPRRGGRTRSRSRDYNSPPPKRHQ 482
EENRKKP +MR R+R GR RF DRRRSPPRYSRSPPPR RSRS DY SPPPKR
Sbjct: 119 EENRKKPVDMRARERAGR-GRFRDRRRSPPRYSRSPPPR---YARSRSHDYGSPPPKRRY 174
Query: 481 SRSVSPQERRYEKERSYSRSPPRNGSRARSGSREKVKKSY--SRSRSPRRSVSPRRNRSY 308
S+S+SPQ +RY +ERSYSRS R+ + R S+ +S +RSRSPRRS S R
Sbjct: 175 SKSISPQGKRYSQERSYSRSRSRSRTPNRDQSQTPRSRSRTPNRSRSPRRSRSQSPTRDE 234
Query: 307 TPEQ 296
P +
Sbjct: 235 YPRE 238
>gi|225435731|ref|XP_002285703.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 245
Score = 321 bits (822), Expect = 1e-085
Identities = 171/250 (68%), Positives = 190/250 (76%), Gaps = 28/250 (11%)
Frame = -2
Query: 1003 GRSYTPSPPRGYGRRGRSPSPRGGSRYGGGGRDRDLPTSLLVRNLRHDCRQEDLRRPFEQ 824
GRSY+PSPPRGYGRRGRSPSPRG RYGG G RDLPTSLLVRNLRHDCR EDLRRPF Q
Sbjct: 3 GRSYSPSPPRGYGRRGRSPSPRG--RYGGRGSARDLPTSLLVRNLRHDCRGEDLRRPFGQ 60
Query: 823 FGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMEGYLLLGRELTVVFAEENRKK 644
FGP+KDIYLPRDYYTG+PRGFGF+QYVDPADAAEAK+ M+G +L GRELTVVFAEENRKK
Sbjct: 61 FGPLKDIYLPRDYYTGEPRGFGFVQYVDPADAAEAKYQMDGQILHGRELTVVFAEENRKK 120
Query: 643 PTEMRTRDRGGRSNRFNDRRRSPPRYSRSPPPRRGGRTRSRSRDYNSPPPKRHQ-SRSVS 467
P++MR R+RG RF DRRRSP RYSRSPPPR R+ SR RDY SP PKR Q SRSVS
Sbjct: 121 PSDMRARERG--RGRFYDRRRSPLRYSRSPPPRH-ARSPSRGRDYYSPSPKRRQYSRSVS 177
Query: 466 PQERRYEKE---------RSYSRSPPRNGSRARSGSREKVKKSYSRSRSPRRSVSPRRNR 314
PQ+RRY ++ RSY+RSPP NGSR SRS+SP R SP R +
Sbjct: 178 PQDRRYSRDRSYTPDGRRRSYTRSPPYNGSR-------------SRSQSPIRGESPSRLQ 224
Query: 313 SYTPEQARSP 284
S +P+ P
Sbjct: 225 SRSPDPEDYP 234
>gi|255635455|gb|ACU18080.1| unknown [Glycine max]
Length = 253
Score = 294 bits (751), Expect = 2e-077
Identities = 168/266 (63%), Positives = 192/266 (72%), Gaps = 29/266 (10%)
Frame = -2
Query: 1009 MRGRSYTPS-PPRGYGRR--GRSPSPRGGSRYGGGGRDRDLPTSLLVRNLRHDCRQEDLR 839
MRGRSY+PS PP Y RR GRSPSPRG RY R +DLPTSLLVRNLRHDCR EDLR
Sbjct: 1 MRGRSYSPSPPPPRYSRRGGGRSPSPRG--RYPPRPRQQDLPTSLLVRNLRHDCRPEDLR 58
Query: 838 RPFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMEGYLLLGRELTVVFAE 659
RPF QFGP+KDIYLP+DYYTG+PRGFGF+Q+VDPADAA+AK+HM+G +LLGRELTVVFAE
Sbjct: 59 RPFGQFGPLKDIYLPKDYYTGEPRGFGFVQFVDPADAADAKYHMDGQVLLGRELTVVFAE 118
Query: 658 ENRKKPTEMRTRDRGGRSNRFNDRRRSP------------PRYSRSPPPRRGGRTRSRSR 515
ENRKKPTEMRTR+R G RF+DRRRSP PRYSRSPPPR R+RS SR
Sbjct: 119 ENRKKPTEMRTRERRG---RFSDRRRSPPRYSRSPRYSRSPRYSRSPPPRH--RSRSHSR 173
Query: 514 DYNSPPPKRHQSRSVSPQERRYEKERSYSRSPPRNGSRARSGSREKVKKSYSRSRSPRRS 335
DY S P +R SRSVSP+ RRY +ERSYS+ +R RS SR SRSRS +
Sbjct: 174 DYYS-PKRREYSRSVSPEGRRYSRERSYSQH-----NRERSFSRSPPYNGGSRSRSQSPA 227
Query: 334 VSPRRNRSYTPEQARSPVPRQSRSPS 257
P R+RS + + P + RSPS
Sbjct: 228 KGPGRSRSPSLNRDEKE-PARGRSPS 252
>gi|255644989|gb|ACU22994.1| unknown [Glycine max]
Length = 214
Score = 293 bits (748), Expect = 5e-077
Identities = 157/219 (71%), Positives = 176/219 (80%), Gaps = 22/219 (10%)
Frame = -2
Query: 1009 MRGRSYTPSPPRGYGRR---GRSPSPRGGSRYGGGGRDRDLPTSLLVRNLRHDCRQEDLR 839
MRGRSY+PSPP + RR GRSPSPRG RY R +DLPTSLLVRNLRHDCR EDLR
Sbjct: 1 MRGRSYSPSPPPRHSRRGGGGRSPSPRG--RYPPRPRQQDLPTSLLVRNLRHDCRPEDLR 58
Query: 838 RPFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMEGYLLLGRELTVVFAE 659
RPF QFGP+KDIYLP+DYYTG+PRGFGF+QYVDPADAA+AK+HM+G +LLGRELTVVFAE
Sbjct: 59 RPFGQFGPLKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKYHMDGQVLLGRELTVVFAE 118
Query: 658 ENRKKPTEMRTRDRGGRSNRFNDRRRSP------PRYSRSPPPRRGGRTRSRSRDYNSPP 497
ENRKKPTEMRTR+R G RF DRRRSP PRYSRSPPPR R+RSRSRDY SPP
Sbjct: 119 ENRKKPTEMRTRERRG---RFYDRRRSPPRYSRSPRYSRSPPPRH--RSRSRSRDYYSPP 173
Query: 496 PKRHQ-SRSVSPQERRYEKERSYSRSPPRNGSRARSGSR 383
KR + SRSVSP++RRY +ERS+S+ SR RS SR
Sbjct: 174 AKRREYSRSVSPEDRRYSRERSFSQH-----SRERSYSR 207
>gi|297722159|ref|NP_001173443.1| Os03g0374575 [Oryza sativa Japonica Group]
Length = 251
Score = 271 bits (692), Expect = 2e-070
Identities = 143/220 (65%), Positives = 164/220 (74%), Gaps = 10/220 (4%)
Frame = -2
Query: 1006 RGRSYTPSPPRGYGRRGRSPSPRGGSRYGGGGRDRDLPTSLLVRNLRHDCRQEDLRRPFE 827
RG Y PSPPR Y RR RSPSPRG RY GGRDRDLPTSLLVRNLR DCR +DLRRPF
Sbjct: 10 RGYDYGPSPPREYRRRARSPSPRG--RY--GGRDRDLPTSLLVRNLRRDCRPDDLRRPFG 65
Query: 826 QFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMEGYLLLGRELTVVFAEENRK 647
+FG VKDIYLPRDYYTG+PRGFGFIQY DP DAA+AK+HM+G +LLGRE+TVVFAEENRK
Sbjct: 66 KFGRVKDIYLPRDYYTGEPRGFGFIQYYDPEDAADAKYHMDGQILLGREVTVVFAEENRK 125
Query: 646 KPTEMRTRDRGGRSNRFNDRRRSPPRYSRSPPPRRGGRTRSRSRDYNSPPPKRHQSRSVS 467
KP+EMR R+R G +R DRR PRYSRS P R+RSRSR Y+ P ++H SRS +
Sbjct: 126 KPSEMRARERVGSRDRSYDRRSRSPRYSRSRSPVYSPRSRSRSRSYSPAPKRKHYSRSPA 185
Query: 466 PQERRYEKERSYSRSPPRNGSRARSGSREKVKKSYSRSRS 347
+ERS SRSP + SR+RS S ++ KS R RS
Sbjct: 186 ------RRERSLSRSPADSRSRSRSLSDDRRSKSPDRERS 219
>gi|108708411|gb|ABF96206.1| RNA recognition motif family protein, expressed
[Oryza sativa Japonica Group]
Length = 218
Score = 267 bits (682), Expect = 2e-069
Identities = 145/216 (67%), Positives = 161/216 (74%), Gaps = 9/216 (4%)
Frame = -2
Query: 994 YTPSPPRGYGRRGRSPSPRGGSRYGGGGRDRDLPTSLLVRNLRHDCRQEDLRRPFEQFGP 815
Y PSPPR Y RR RSPSPRG RY GGRDRDLPTSLLVRNLR DCR +DLRRPF +FG
Sbjct: 7 YGPSPPREYRRRARSPSPRG--RY--GGRDRDLPTSLLVRNLRRDCRPDDLRRPFGKFGR 62
Query: 814 VKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMEGYLLLGRELTVVFAEENRKKPTE 635
VKDIYLPRDYYTG+PRGFGFIQY DP DAA+AK+HM+G +LLGRE+TVVFAEENRKKP+E
Sbjct: 63 VKDIYLPRDYYTGEPRGFGFIQYYDPEDAADAKYHMDGQILLGREVTVVFAEENRKKPSE 122
Query: 634 MRTRDRGGRSNRFNDRRRSPPRYSRSPPPRRGGRTRSRSRDYNSPPPKRHQSRSVSPQER 455
MR R+R G +R DRR PRYSRS P R+RSRSR Y SP PKR S SP R
Sbjct: 123 MRARERVGSRDRSYDRRSRSPRYSRSRSPVYSPRSRSRSRSY-SPAPKRKHYSSRSPARR 181
Query: 454 RYEKERSYSRSPPRNGSRARSGSREKVKKSYSRSRS 347
ERS SRSP + SR+RS S ++ KS R RS
Sbjct: 182 ----ERSLSRSPADSRSRSRSLSDDRRSKSPDRERS 213
>gi|31249706|gb|AAP46199.1| putative splicing factor [Oryza sativa Japonica
Group]
Length = 217
Score = 266 bits (679), Expect = 5e-069
Identities = 140/215 (65%), Positives = 161/215 (74%), Gaps = 10/215 (4%)
Frame = -2
Query: 994 YTPSPPRGYGRRGRSPSPRGGSRYGGGGRDRDLPTSLLVRNLRHDCRQEDLRRPFEQFGP 815
Y PSPPR Y RR RSPSPRG RY GGRDRDLPTSLLVRNLR DCR +DLRRPF +FG
Sbjct: 7 YGPSPPREYRRRARSPSPRG--RY--GGRDRDLPTSLLVRNLRRDCRPDDLRRPFGKFGR 62
Query: 814 VKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMEGYLLLGRELTVVFAEENRKKPTE 635
VKDIYLPRDYYTG+PRGFGFIQY DP DAA+AK+HM+G +LLGRE+TVVFAEENRKKP+E
Sbjct: 63 VKDIYLPRDYYTGEPRGFGFIQYYDPEDAADAKYHMDGQILLGREVTVVFAEENRKKPSE 122
Query: 634 MRTRDRGGRSNRFNDRRRSPPRYSRSPPPRRGGRTRSRSRDYNSPPPKRHQSRSVSPQER 455
MR R+R G +R DRR PRYSRS P R+RSRSR Y+ P ++H SRS +
Sbjct: 123 MRARERVGSRDRSYDRRSRSPRYSRSRSPVYSPRSRSRSRSYSPAPKRKHYSRSPA---- 178
Query: 454 RYEKERSYSRSPPRNGSRARSGSREKVKKSYSRSR 350
+ERS SRSP + SR+RS S ++ KS R R
Sbjct: 179 --RRERSLSRSPADSRSRSRSLSDDRRSKSPDRER 211
>gi|255581554|ref|XP_002531582.1| serine/arginine rich splicing factor, putative
[Ricinus communis]
Length = 216
Score = 263 bits (671), Expect = 4e-068
Identities = 151/219 (68%), Positives = 172/219 (78%), Gaps = 19/219 (8%)
Frame = -2
Query: 1009 MRGRSYTPS---PPRG-YGRRGRSPSPRGGSRYGGGGRDRDLPTSLLVRNLRHDCRQEDL 842
MRGRSY+ S PPRG YGRR RSPSPR +RY GGR RDLPTSLLVRNLRHDCR EDL
Sbjct: 1 MRGRSYSYSPSPPPRGYYGRRYRSPSPR--NRY--GGRSRDLPTSLLVRNLRHDCRTEDL 56
Query: 841 RRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMEGYLLLGRELTVVFA 662
R PF FGP+KDIYLPRDYYTG+PRGFGF+QYVDPADAA+AKHHM+G +LLGRELTVVFA
Sbjct: 57 RGPFGHFGPLKDIYLPRDYYTGEPRGFGFVQYVDPADAADAKHHMDGEILLGRELTVVFA 116
Query: 661 EENRKKPTEMRTRDR-GGRSNRFNDRRRSPPRYSRSPPPRRGGRTRSRSRDYNSPPPK-R 488
EENRKKP EMR R+R GRS DR+RSP YSRSP R R+ SRS Y S P+ R
Sbjct: 117 EENRKKPAEMRARERVRGRS---YDRKRSPQCYSRSP---RYRRSYSRSPLYYSRSPRQR 170
Query: 487 HQSRSVSPQERRYEKERSYSRSP--PRNGSRARSGSREK 377
+ SRS+SP++RRY +E+S+SRSP PR+ SR S SR +
Sbjct: 171 NYSRSISPRDRRY-REQSFSRSPYAPRSQSRTPSRSRSR 208
>gi|212723388|ref|NP_001131976.1| hypothetical protein LOC100193374 [Zea mays]
Length = 216
Score = 244 bits (621), Expect = 3e-062
Identities = 130/208 (62%), Positives = 157/208 (75%), Gaps = 14/208 (6%)
Frame = -2
Query: 1003 GRSY--TPSPPRGYGRRGRSPSPRGGSRYGGGGRDRDLPTSLLVRNLRHDCRQEDLRRPF 830
GRSY +PSPPRGY RR RSPSPRG RYGG DRDLPTSLLVRNLR DCR +DLRRPF
Sbjct: 2 GRSYNHSPSPPRGYRRRTRSPSPRG--RYGGRDTDRDLPTSLLVRNLRRDCRPDDLRRPF 59
Query: 829 EQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMEGYLLLGRELTVVFAEENR 650
+FGPVKDIYLP+DYYT +PRGFGFIQY DP DA++AK++M+G +LLGRE+ VVFAEENR
Sbjct: 60 GKFGPVKDIYLPKDYYTREPRGFGFIQYFDPEDASDAKYYMDGKMLLGREIAVVFAEENR 119
Query: 649 KKPTEMRTRDR-GGRSNRFNDRRRS-PPRYSRSPPPRRGGRTRSRSRDYNSPPPKRHQSR 476
KKP++MR R++ GR ++ R RS P + SP GR+RS+SR Y+ P ++H SR
Sbjct: 120 KKPSDMRAREKISGRGRSYDGRLRSRSPGLNGSP----RGRSRSQSRSYSPAPKRKHYSR 175
Query: 475 SVSPQERRYEKERSYSRSPPRNGSRARS 392
S +P+ R ERS SRSP N SR+ S
Sbjct: 176 SPAPRPR----ERSLSRSPAVNRSRSAS 199
>gi|242035637|ref|XP_002465213.1| hypothetical protein SORBIDRAFT_01g034200
[Sorghum bicolor]
Length = 213
Score = 240 bits (611), Expect = 4e-061
Identities = 130/205 (63%), Positives = 155/205 (75%), Gaps = 14/205 (6%)
Frame = -2
Query: 994 YTPSPPRGYGRRGRSPSPRGGSRYGGGGRDRDLPTSLLVRNLRHDCRQEDLRRPFEQFGP 815
Y+PSPPRGY RR RSPSPRG RY GGR RDLPTSLLVRNLR DCR +DLRRPF +FG
Sbjct: 7 YSPSPPRGYRRRTRSPSPRG--RY--GGRGRDLPTSLLVRNLRRDCRPDDLRRPFGKFGR 62
Query: 814 VKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMEGYLLLGRELTVVFAEENRKKPTE 635
VKDIYLP+DYYT +P+GFGFIQY DP DA++AK+HM+G +LLGRE+TVVFAEENRKKP++
Sbjct: 63 VKDIYLPKDYYTREPKGFGFIQYFDPEDASDAKYHMDGQMLLGREITVVFAEENRKKPSD 122
Query: 634 MRTRDR-GGRSNRFNDRRRS-PPRYSRSPPPRRGGRTRSRSRDYNSPPPKRHQSRSVSPQ 461
MR R+R GRS ++ R RS P YS SP GR+RS S ++ P ++H SRS SP+
Sbjct: 123 MRARERMSGRSRSYDRRLRSRSPGYSDSP----RGRSRSHSPSHSPAPKRKHYSRSPSPR 178
Query: 460 ERRYEKERSYSRSPPRNGSRARSGS 386
R ERS SRSP + SR+ S S
Sbjct: 179 PR----ERSMSRSPADSRSRSVSPS 199
>gi|195631119|gb|ACG36660.1| splicing factor, arginine/serine-rich 4 [Zea mays]
Length = 209
Score = 233 bits (593), Expect = 5e-059
Identities = 133/214 (62%), Positives = 154/214 (71%), Gaps = 23/214 (10%)
Frame = -2
Query: 997 SYTPSPPRGYGRRGRSPSPRGGSRYGGGGRDRDLPTSLLVRNLRHDCRQEDLRRPFEQFG 818
SY+PSPPRGY RR RSPSP Y GGR RDLPTSLLVRNLR DCR EDLRRPF QFG
Sbjct: 6 SYSPSPPRGYRRRARSPSPH--DHY--GGRGRDLPTSLLVRNLRRDCRPEDLRRPFGQFG 61
Query: 817 PVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMEGYLLLGRELTVVFAEENRKKPT 638
VKDIYLPRDYYTGDPRGFGF+QY DPADAA+AK++M+G ++LGR++TVVFAEENRKKP
Sbjct: 62 RVKDIYLPRDYYTGDPRGFGFVQYYDPADAADAKYYMDGQVVLGRQITVVFAEENRKKPQ 121
Query: 637 EMRTRDRGGRSNRFNDRRRSPPRYSRSPPPR-RGGRTRSRSRDYNSPPPK------RHQS 479
EMR RDR R + ++DR RYSRS PR GR+ SRS+ Y+ PP+ R +S
Sbjct: 122 EMRARDR-VRGHSYDDR-----RYSRSRSPRYYRGRSPSRSQSYSRSPPQNPRHRLRERS 175
Query: 478 RSVSPQERRYEKERSYSRSPPRNGSRARSGSREK 377
S SP + RS S SP +G R RS RE+
Sbjct: 176 YSGSPVD-----SRSRSGSPYEDGYR-RSSRRER 203
>gi|194688600|gb|ACF78384.1| unknown [Zea mays]
Length = 209
Score = 232 bits (590), Expect = 1e-058
Identities = 132/214 (61%), Positives = 154/214 (71%), Gaps = 23/214 (10%)
Frame = -2
Query: 997 SYTPSPPRGYGRRGRSPSPRGGSRYGGGGRDRDLPTSLLVRNLRHDCRQEDLRRPFEQFG 818
SY+PSPPRGY RR RSPSP Y GGR RDLPTSLLVRNLR DCR EDLRRPF QFG
Sbjct: 6 SYSPSPPRGYRRRARSPSPH--DHY--GGRGRDLPTSLLVRNLRRDCRPEDLRRPFGQFG 61
Query: 817 PVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMEGYLLLGRELTVVFAEENRKKPT 638
VKDIYLPRDYYTGDPRGFGF+QY DPADAA+AK++M+G ++LGR++TVVFAEENRKKP
Sbjct: 62 RVKDIYLPRDYYTGDPRGFGFVQYYDPADAADAKYYMDGQVVLGRQITVVFAEENRKKPQ 121
Query: 637 EMRTRDRGGRSNRFNDRRRSPPRYSRSPPPR-RGGRTRSRSRDYNSPPPK------RHQS 479
EMR RDR R + ++DR RYSRS PR GR+ SRS+ Y+ PP+ R +S
Sbjct: 122 EMRARDR-VRGHSYDDR-----RYSRSRSPRYYRGRSPSRSQSYSRSPPQNPRHRLRERS 175
Query: 478 RSVSPQERRYEKERSYSRSPPRNGSRARSGSREK 377
S SP + RS S SP +G R +S RE+
Sbjct: 176 YSGSPVD-----SRSRSGSPYEDGYR-KSSRRER 203
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 820,436,272,897
Number of Sequences: 15229318
Number of Extensions: 820436272897
Number of Successful Extensions: 245335014
Number of sequences better than 0.0: 0
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