BLASTX 7.6.2
Query= UN07238 /QuerySize=1107
(1106 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O75494|SF13A_HUMAN Splicing factor, arginine/serine-rich 13A ... 141 1e-032
sp|Q9R0U0|SF13A_MOUSE Splicing factor, arginine/serine-rich 13A ... 141 1e-032
sp|Q09511|RSP4_CAEEL Probable splicing factor, arginine/serine-r... 122 4e-027
sp|Q8WXF0|SF13B_HUMAN Splicing factor, arginine/serine-rich 13B ... 122 5e-027
sp|Q3MHR5|SFRS2_BOVIN Splicing factor, arginine/serine-rich 2 OS... 114 1e-024
sp|P30352|SFRS2_CHICK Splicing factor, arginine/serine-rich 2 OS... 114 1e-024
sp|Q01130|SFRS2_HUMAN Splicing factor, arginine/serine-rich 2 OS... 114 1e-024
sp|Q62093|SFRS2_MOUSE Splicing factor, arginine/serine-rich 2 OS... 114 1e-024
sp|Q06A98|SFRS2_PIG Splicing factor, arginine/serine-rich 2 OS=S... 114 1e-024
sp|Q6PDU1|SFRS2_RAT Splicing factor, arginine/serine-rich 2 OS=R... 114 1e-024
sp|Q5R1W5|SFRS2_PANTR Splicing factor, arginine/serine-rich 2 OS... 113 3e-024
sp|Q9BRL6|SFR2B_HUMAN Splicing factor, arginine/serine-rich 2B O... 102 4e-021
sp|Q60990|RBY1B_MOUSE RNA-binding motif protein, Y chromosome, f... 67 2e-010
sp|Q44560|RBPA_ANASP Putative RNA-binding protein rbpA OS=Anabae... 64 2e-009
sp|Q8R3C6|RBM19_MOUSE Probable RNA-binding protein 19 OS=Mus mus... 62 5e-009
sp|Q44554|RBPB_ANASP Putative RNA-binding protein rbpB OS=Anabae... 62 9e-009
sp|Q6C747|EIF3G_YARLI Eukaryotic translation initiation factor 3... 61 1e-008
sp|Q9Y4C8|RBM19_HUMAN Probable RNA-binding protein 19 OS=Homo sa... 60 3e-008
sp|Q4R626|CA063_MACFA UPF0471 protein C1orf63 homolog OS=Macaca ... 59 4e-008
sp|Q54PB2|MRD1_DICDI Multiple RNA-binding domain-containing prot... 59 4e-008
>sp|O75494|SF13A_HUMAN Splicing factor, arginine/serine-rich 13A OS=Homo sapiens
GN=SFRS13A PE=1 SV=1
Length = 262
Score = 141 bits (353), Expect = 1e-032
Identities = 88/240 (36%), Positives = 138/240 (57%), Gaps = 20/240 (8%)
Frame = -2
Query: 892 TSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKH 713
TSL VRN+ D R EDLRR F ++GP+ D+Y+P D+YT PRGF ++Q+ D DA +A H
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 712 HMEGYLLLGRELTVVFAEENRKKPTEMRTRDRGGR----SNRFNDRRRSPPRYSRSPPPR 545
+++ + GR++ + FA+ +RK P +M+ ++ GR S+R++D R SRS R
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE--GRNVYSSSRYDDYDRYRRSRSRSYERR 127
Query: 544 RGGRTRSRSRDYN----------SPPPKRHQSRSVSPQERRYEKERSYSRSPPRNGSRAR 395
R+RSRS DYN P + +SRS S +R + RS+SRS + SR++
Sbjct: 128 ---RSRSRSFDYNYRRSYSPRNSRPTGRPRRSRSHSDNDRFKHRNRSFSRSKSNSRSRSK 184
Query: 394 SGSREKVK-KSYSRSRSPRRSVSPRRNRSYTPEQARSPVPRQSRSPSPRGERNGDRSPSQ 218
S ++++K KS SRS S ++ + S T ++ S ++SR P ++ RS S+
Sbjct: 185 SQPKKEMKAKSRSRSASHTKTRGTSKTDSKTHYKSGSRYEKESRKKEPPRSKSQSRSQSR 244
>sp|Q9R0U0|SF13A_MOUSE Splicing factor, arginine/serine-rich 13A OS=Mus musculus
GN=Sfrs13a PE=1 SV=2
Length = 262
Score = 141 bits (353), Expect = 1e-032
Identities = 88/240 (36%), Positives = 138/240 (57%), Gaps = 20/240 (8%)
Frame = -2
Query: 892 TSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKH 713
TSL VRN+ D R EDLRR F ++GP+ D+Y+P D+YT PRGF ++Q+ D DA +A H
Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 712 HMEGYLLLGRELTVVFAEENRKKPTEMRTRDRGGR----SNRFNDRRRSPPRYSRSPPPR 545
+++ + GR++ + FA+ +RK P +M+ ++ GR S+R++D R SRS R
Sbjct: 70 NLDRKWICGRQIEIQFAQGDRKTPNQMKAKE--GRNVYSSSRYDDYDRYRRSRSRSYERR 127
Query: 544 RGGRTRSRSRDYN----------SPPPKRHQSRSVSPQERRYEKERSYSRSPPRNGSRAR 395
R+RSRS DYN P + +SRS S +R + RS+SRS + SR++
Sbjct: 128 ---RSRSRSFDYNYRRSYSPRNSRPTGRPRRSRSHSDNDRFKHRNRSFSRSKSNSRSRSK 184
Query: 394 SGSREKVK-KSYSRSRSPRRSVSPRRNRSYTPEQARSPVPRQSRSPSPRGERNGDRSPSQ 218
S ++++K KS SRS S ++ + S T ++ S ++SR P ++ RS S+
Sbjct: 185 SQPKKEMKAKSRSRSASHTKTRGTSKTDSKTHYKSGSRYEKESRKKEPPRSKSQSRSQSR 244
>sp|Q09511|RSP4_CAEEL Probable splicing factor, arginine/serine-rich 4
OS=Caenorhabditis elegans GN=rsp-4 PE=2 SV=1
Length = 196
Score = 122 bits (306), Expect = 4e-027
Identities = 84/193 (43%), Positives = 107/193 (55%), Gaps = 13/193 (6%)
Frame = -2
Query: 922 GGGGRDRDLP-----TSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFG 758
GGGG R P TSL + NL + DLRR FE++G + D+++PRD Y+ +GFG
Sbjct: 4 GGGGDRRAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFG 63
Query: 757 FIQYVDPADAAEAKHHMEGYLLLGRELTVVFAEENRKKPTEMRTRDRGGRSNRFNDRRRS 578
F+++ + DA A +G L+ GREL V A+ +R GGR + RRRS
Sbjct: 64 FVRFYERRDAEHALDRTDGKLVDGRELRVTLAKYDRPSDERGGRGGGGGRRRSRSPRRRS 123
Query: 577 -PPRYSRSPPPRRG-GRTRS-RSRDYNSPPPKRHQSRSVS----PQERRYEKE-RSYSRS 422
PRYSRS PRR RTRS SRD P +R SRS S P+E KE RS SRS
Sbjct: 124 RSPRYSRSRSPRRSRSRTRSPPSRDRRDSPDRRDNSRSRSRSPPPREDGSPKERRSRSRS 183
Query: 421 PPRNGSRARSGSR 383
R+ SR+RS SR
Sbjct: 184 ASRSPSRSRSNSR 196
>sp|Q8WXF0|SF13B_HUMAN Splicing factor, arginine/serine-rich 13B OS=Homo sapiens
GN=SFRS13B PE=1 SV=1
Length = 261
Score = 122 bits (305), Expect = 5e-027
Identities = 81/232 (34%), Positives = 122/232 (52%), Gaps = 18/232 (7%)
Frame = -2
Query: 892 TSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKH 713
TSL +RN+ R EDLRR F ++GP+ D+Y+P D+YT PRGF ++Q+ D DA +A +
Sbjct: 10 TSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALY 69
Query: 712 HMEGYLLLGRELTVVFAEENRKKPTEMRTRDRGGRSNRFNDRRRSPPRYSRSPPPRRGGR 533
++ + GR++ + FA+ +RK P +M++++R S + R RSP + GR
Sbjct: 70 NLNRKWVCGRQIEIQFAQGDRKTPGQMKSKERHPCSPSDHRRSRSPSQRRTRSRSSSWGR 129
Query: 532 TRSRSRDYNSPPPKR---HQSRSVSPQERRYEKERSYSRSPPRN-GSRARSGSREKVKKS 365
R RS +R QS+S S R SR+P RN GSR RS S+ K+S
Sbjct: 130 NRRRSDSLKESRHRRFSYSQSKSRSKSLPRRSTSARQSRTPRRNFGSRGRSRSKSLQKRS 189
Query: 364 ----YSRSRSPRRSVS----PRRNRSYTPEQARSPVPRQSRSPSPRGERNGD 233
S+S SP++ S R + ++ ARSP SP+G N +
Sbjct: 190 KSIGKSQSSSPQKQTSSGTKSRSHGRHSDSIARSP------CKSPKGYTNSE 235
>sp|Q3MHR5|SFRS2_BOVIN Splicing factor, arginine/serine-rich 2 OS=Bos taurus
GN=SFRS2 PE=2 SV=3
Length = 221
Score = 114 bits (284), Expect = 1e-024
Identities = 84/218 (38%), Positives = 113/218 (51%), Gaps = 15/218 (6%)
Frame = -2
Query: 925 YGGGGRDRDLPTSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQY 746
YG D + TSL V NL + + LRR FE++G V D+Y+PRD YT + RGF F+++
Sbjct: 3 YGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 62
Query: 745 VDPADAAEAKHHMEGYLLLGRELTVVFAEENRKKPTEMRTRDRGGRSNRFN----DRRRS 578
D DA +A M+G +L GREL V A R P + RG R+ RR
Sbjct: 63 HDKRDAEDAMDAMDGAVLDGRELRVQMARYGR--PPDSHHSRRGPPPRRYGGGGYGRRSR 120
Query: 577 PPRYSRSPPPRRGGRTRSRSRDYNSPPPKRHQSRSVSPQERRYEKERSYSRSPPRNGSRA 398
PR R R R+RSRSR S R ++RS + R K RS RS ++ S +
Sbjct: 121 SPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRS---RSRSTSKSRSARRSKSKSSSVS 177
Query: 397 RSGSREKVKKSYSRSRSP---RRSVSPRRNRSYTPEQA 293
RS SR +S SRSRSP + S R+RS +P ++
Sbjct: 178 RSRSR---SRSRSRSRSPPPVSKRESKSRSRSKSPPKS 212
>sp|P30352|SFRS2_CHICK Splicing factor, arginine/serine-rich 2 OS=Gallus gallus
GN=SFRS2 PE=2 SV=1
Length = 221
Score = 114 bits (284), Expect = 1e-024
Identities = 84/218 (38%), Positives = 113/218 (51%), Gaps = 15/218 (6%)
Frame = -2
Query: 925 YGGGGRDRDLPTSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQY 746
YG D + TSL V NL + + LRR FE++G V D+Y+PRD YT + RGF F+++
Sbjct: 3 YGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 62
Query: 745 VDPADAAEAKHHMEGYLLLGRELTVVFAEENRKKPTEMRTRDRGGRSNRFND----RRRS 578
D DA +A M+G +L GREL V A R P + RG R+ RR
Sbjct: 63 HDKRDAEDAMDAMDGAVLDGRELRVQMARYGR--PPDSHHSRRGPPPRRYGSSGYGRRSR 120
Query: 577 PPRYSRSPPPRRGGRTRSRSRDYNSPPPKRHQSRSVSPQERRYEKERSYSRSPPRNGSRA 398
PR R R R+RSRSR S R ++RS + R K RS RS ++ S +
Sbjct: 121 SPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRS---RSRSTSKSRSARRSKSKSSSVS 177
Query: 397 RSGSREKVKKSYSRSRSP---RRSVSPRRNRSYTPEQA 293
RS SR +S SRSRSP + S R+RS +P ++
Sbjct: 178 RSRSR---SRSRSRSRSPPPTSKRESNSRSRSKSPPKS 212
>sp|Q01130|SFRS2_HUMAN Splicing factor, arginine/serine-rich 2 OS=Homo sapiens
GN=SFRS2 PE=1 SV=4
Length = 221
Score = 114 bits (284), Expect = 1e-024
Identities = 84/218 (38%), Positives = 113/218 (51%), Gaps = 15/218 (6%)
Frame = -2
Query: 925 YGGGGRDRDLPTSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQY 746
YG D + TSL V NL + + LRR FE++G V D+Y+PRD YT + RGF F+++
Sbjct: 3 YGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 62
Query: 745 VDPADAAEAKHHMEGYLLLGRELTVVFAEENRKKPTEMRTRDRGGRSNRFN----DRRRS 578
D DA +A M+G +L GREL V A R P + RG R+ RR
Sbjct: 63 HDKRDAEDAMDAMDGAVLDGRELRVQMARYGR--PPDSHHSRRGPPPRRYGGGGYGRRSR 120
Query: 577 PPRYSRSPPPRRGGRTRSRSRDYNSPPPKRHQSRSVSPQERRYEKERSYSRSPPRNGSRA 398
PR R R R+RSRSR S R ++RS + R K RS RS ++ S +
Sbjct: 121 SPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRS---RSRSTSKSRSARRSKSKSSSVS 177
Query: 397 RSGSREKVKKSYSRSRSP---RRSVSPRRNRSYTPEQA 293
RS SR +S SRSRSP + S R+RS +P ++
Sbjct: 178 RSRSR---SRSRSRSRSPPPVSKRESKSRSRSKSPPKS 212
>sp|Q62093|SFRS2_MOUSE Splicing factor, arginine/serine-rich 2 OS=Mus musculus
GN=Sfrs2 PE=1 SV=4
Length = 221
Score = 114 bits (284), Expect = 1e-024
Identities = 84/218 (38%), Positives = 113/218 (51%), Gaps = 15/218 (6%)
Frame = -2
Query: 925 YGGGGRDRDLPTSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQY 746
YG D + TSL V NL + + LRR FE++G V D+Y+PRD YT + RGF F+++
Sbjct: 3 YGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 62
Query: 745 VDPADAAEAKHHMEGYLLLGRELTVVFAEENRKKPTEMRTRDRGGRSNRFN----DRRRS 578
D DA +A M+G +L GREL V A R P + RG R+ RR
Sbjct: 63 HDKRDAEDAMDAMDGAVLDGRELRVQMARYGR--PPDSHHSRRGPPPRRYGGGGYGRRSR 120
Query: 577 PPRYSRSPPPRRGGRTRSRSRDYNSPPPKRHQSRSVSPQERRYEKERSYSRSPPRNGSRA 398
PR R R R+RSRSR S R ++RS + R K RS RS ++ S +
Sbjct: 121 SPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRS---RSRSTSKSRSARRSKSKSSSVS 177
Query: 397 RSGSREKVKKSYSRSRSP---RRSVSPRRNRSYTPEQA 293
RS SR +S SRSRSP + S R+RS +P ++
Sbjct: 178 RSRSR---SRSRSRSRSPPPVSKRESKSRSRSKSPPKS 212
>sp|Q06A98|SFRS2_PIG Splicing factor, arginine/serine-rich 2 OS=Sus scrofa
GN=SFRS2 PE=2 SV=1
Length = 221
Score = 114 bits (284), Expect = 1e-024
Identities = 84/218 (38%), Positives = 113/218 (51%), Gaps = 15/218 (6%)
Frame = -2
Query: 925 YGGGGRDRDLPTSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQY 746
YG D + TSL V NL + + LRR FE++G V D+Y+PRD YT + RGF F+++
Sbjct: 3 YGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 62
Query: 745 VDPADAAEAKHHMEGYLLLGRELTVVFAEENRKKPTEMRTRDRGGRSNRFN----DRRRS 578
D DA +A M+G +L GREL V A R P + RG R+ RR
Sbjct: 63 HDKRDAEDAMDAMDGAVLDGRELRVQMARYGR--PPDSHHSRRGPPPRRYGGGGYGRRSR 120
Query: 577 PPRYSRSPPPRRGGRTRSRSRDYNSPPPKRHQSRSVSPQERRYEKERSYSRSPPRNGSRA 398
PR R R R+RSRSR S R ++RS + R K RS RS ++ S +
Sbjct: 121 SPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRS---RSRSTSKSRSARRSKSKSSSVS 177
Query: 397 RSGSREKVKKSYSRSRSP---RRSVSPRRNRSYTPEQA 293
RS SR +S SRSRSP + S R+RS +P ++
Sbjct: 178 RSRSR---SRSRSRSRSPPPASKRESKSRSRSKSPPKS 212
>sp|Q6PDU1|SFRS2_RAT Splicing factor, arginine/serine-rich 2 OS=Rattus
norvegicus GN=Sfrs2 PE=1 SV=3
Length = 221
Score = 114 bits (284), Expect = 1e-024
Identities = 84/218 (38%), Positives = 113/218 (51%), Gaps = 15/218 (6%)
Frame = -2
Query: 925 YGGGGRDRDLPTSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQY 746
YG D + TSL V NL + + LRR FE++G V D+Y+PRD YT + RGF F+++
Sbjct: 3 YGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 62
Query: 745 VDPADAAEAKHHMEGYLLLGRELTVVFAEENRKKPTEMRTRDRGGRSNRFN----DRRRS 578
D DA +A M+G +L GREL V A R P + RG R+ RR
Sbjct: 63 HDKRDAEDAMDAMDGAVLDGRELRVQMARYGR--PPDSHHSRRGPPPRRYGGGGYGRRSR 120
Query: 577 PPRYSRSPPPRRGGRTRSRSRDYNSPPPKRHQSRSVSPQERRYEKERSYSRSPPRNGSRA 398
PR R R R+RSRSR S R ++RS + R K RS RS ++ S +
Sbjct: 121 SPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRS---RSRSTSKSRSARRSKSKSSSVS 177
Query: 397 RSGSREKVKKSYSRSRSP---RRSVSPRRNRSYTPEQA 293
RS SR +S SRSRSP + S R+RS +P ++
Sbjct: 178 RSRSR---SRSRSRSRSPPPVSKRESKSRSRSKSPPKS 212
>sp|Q5R1W5|SFRS2_PANTR Splicing factor, arginine/serine-rich 2 OS=Pan
troglodytes GN=SFRS2 PE=2 SV=3
Length = 221
Score = 113 bits (281), Expect = 3e-024
Identities = 86/219 (39%), Positives = 114/219 (52%), Gaps = 17/219 (7%)
Frame = -2
Query: 925 YGGGGRDRDLPTSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQY 746
YG D + TSL V NL + + LRR FE++G V D+Y+PRD YT + RGF F+++
Sbjct: 3 YGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 62
Query: 745 VDPADAAEAKHHMEGYLLLGRELTVVFAEENRKKPTEMRTRDRGGRSNRFN----DRRRS 578
D DA +A M+G +L GREL V A R P + RG R+ RR
Sbjct: 63 HDKRDAEDAMDAMDGAVLDGRELRVQMARYGR--PPDSHHSRRGPPPRRYGGGGYGRRSR 120
Query: 577 PPRYSRSPPPRRGGRTRSRSRDYNSPPPKRHQSRSVSPQERRYEKERSYSRSPPRNGSRA 398
PR R R R+RSRSR S R ++RS + R K RS RS ++ S +
Sbjct: 121 SPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRS---RSRSTSKSRSARRSKSKSSSVS 177
Query: 397 RSGSREKVKKSYSRSRSPRRSVSPR----RNRSYTPEQA 293
RS SR +S SRSRSP VS R R+RS +P ++
Sbjct: 178 RSRSR---SRSRSRSRSP-PPVSKREPKSRSRSKSPPES 212
>sp|Q9BRL6|SFR2B_HUMAN Splicing factor, arginine/serine-rich 2B OS=Homo sapiens
GN=SFRS2B PE=1 SV=1
Length = 282
Score = 102 bits (254), Expect = 4e-021
Identities = 87/246 (35%), Positives = 117/246 (47%), Gaps = 13/246 (5%)
Frame = -2
Query: 907 DRDLPTSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADA 728
D D +L V NL + + LRR FE++G V D+Y+PR+ +T PRGF F+++ D DA
Sbjct: 9 DVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDA 68
Query: 727 AEAKHHMEGYLLLGRELTVVFAEENRK-----KPTEMRTRDRGGRSNRFNDRRRSPPRYS 563
+A+ M+G L GREL V A R+ + E R R RGG R R RS R S
Sbjct: 69 QDAEAAMDGAELDGRELRVQVARYGRRDLPRSRQGEPRGRSRGGGYGR---RSRSYGRRS 125
Query: 562 RSPPPRRGGRTRSRSRDYNSPPPKRHQSR-SVSPQERRYEKERSYSRSPPRNG--SRARS 392
RSP R R+R S + + SR S SP R YSRSP +R
Sbjct: 126 RSPRRRHRSRSRGPSCSRSRSRSRYRGSRYSRSPYSRSPYSRSRYSRSPYSRSRYRESRY 185
Query: 391 GSREKVKKSYSRSRSPRRSVSPRRNRSYTPEQARSPVPRQSRSPSPRGERNGDRSPSQ*F 212
G YS SR R S ++S + +RS S+S S R ++ S S+
Sbjct: 186 GGSHYSSSGYSNSRYSRYHSSRSHSKSGSSTSSRS--ASTSKSSSARRSKSSSVSRSRSR 243
Query: 211 SLFSSV 194
S SS+
Sbjct: 244 SRSSSM 249
>sp|Q60990|RBY1B_MOUSE RNA-binding motif protein, Y chromosome, family 1 member
B OS=Mus musculus GN=Rbmy1b PE=2 SV=2
Length = 380
Score = 67 bits (163), Expect = 2e-010
Identities = 63/230 (27%), Positives = 100/230 (43%), Gaps = 17/230 (7%)
Frame = -2
Query: 907 DRDLPTSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADA 728
+ D P + + L RQ+ L+ F +FGPV + L RD T RGF F+ + PADA
Sbjct: 3 ETDQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRPADA 62
Query: 727 AEAKHHMEGYLLLGRELTVVFAEENRKKPTEMRTRDRGGRSNRFNDRRRSPPRYSRSPPP 548
A M G +L G+ + V + ++P+ + + + R F+ R + SR
Sbjct: 63 KNAVKEMNGVILDGKRIKV----KQARRPSSLESGSK-KRPPSFSRTRGA----SRILKC 113
Query: 547 RRGGRTRSRSR---DYNSPPPKRHQSRSVSPQERRYEKERSYSRSPPRNGSRARSGSREK 377
RGGR+R+RS + N + + +VS R + +R+ S S+ + S +
Sbjct: 114 GRGGRSRARSGPSCEGNLGGDRYTPNFNVSSSGRHFAVKRNPSSKRDGPPSKRSATSAQT 173
Query: 376 VKKSYSRSRSP-RRSVSPRRNRSYTPEQARSPVPRQSRSPSPRGERNGDR 230
+ R R P RR +S R R P P G+ + DR
Sbjct: 174 RSNTGLRGREPHRREISRNMPRGEPASSRRDEYP----LPRDYGQSSNDR 219
>sp|Q44560|RBPA_ANASP Putative RNA-binding protein rbpA OS=Anabaena sp. (strain
PCC 7120) GN=rbpA PE=3 SV=3
Length = 102
Score = 64 bits (153), Expect = 2e-009
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Frame = -2
Query: 889 SLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHH 710
S+ V NL ++ Q+ L F ++G VK + LP D TG PRGFGF++ A+ A A
Sbjct: 2 SIYVGNLSYEVTQDTLSAVFAEYGTVKRVQLPTDRETGQPRGFGFVEMGSEAEEAAAIEA 61
Query: 709 MEGYLLLGRELTVVFAEENRKKPTEMRTRDRGGR 608
++G +GR+L V N+ KP E R G R
Sbjct: 62 LDGAEWMGRDLKV-----NKAKPREDRGPSGGNR 90
>sp|Q8R3C6|RBM19_MOUSE Probable RNA-binding protein 19 OS=Mus musculus GN=Rbm19
PE=1 SV=1
Length = 952
Score = 62 bits (150), Expect = 5e-009
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Frame = -2
Query: 955 RSPSPRGGSRYGGGGRDRDLPTS--LLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYY 782
+S +P G G + DL S L VRNL + +EDL + F +GP+ +++ P D
Sbjct: 377 KSTTPWQGRTLGENEEEEDLADSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSL 436
Query: 781 TGDPRGFGFIQYVDPADAAEAKHHMEGYLLLGRELTVV 668
T P+GF F+ ++ P A +A ++G + GR L V+
Sbjct: 437 TKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVL 474
>sp|Q44554|RBPB_ANASP Putative RNA-binding protein rbpB OS=Anabaena sp. (strain
PCC 7120) GN=rbpB PE=3 SV=3
Length = 103
Score = 62 bits (148), Expect = 9e-009
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Frame = -2
Query: 889 SLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHH 710
S+ V NL +D +E L F ++G VK + LP D TG RGFGF++ A+ A
Sbjct: 2 SIYVGNLSYDVTEESLNAVFAEYGSVKRVQLPVDRETGRVRGFGFVEMGSDAEETAAIEA 61
Query: 709 MEGYLLLGRELTVVFAEENRKKPTEMRTRDRGG-RSNRFNDRRR 581
++G +GR+L V N+ KP E R RG NR N+ R
Sbjct: 62 LDGAEWMGRDLKV-----NKAKPREDRGGSRGSFGGNRSNNNFR 100
>sp|Q6C747|EIF3G_YARLI Eukaryotic translation initiation factor 3 subunit G
OS=Yarrowia lipolytica GN=TIF35 PE=3 SV=1
Length = 294
Score = 61 bits (147), Expect = 1e-008
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = -2
Query: 961 RGRSPSPRGGSRYGGGGR-DRDLPTSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDY 785
R + P GG GGR D D +L V NL + +DLRR F ++G + +Y+ +D
Sbjct: 190 RNKGPGGPGGPGGAAGGRSDDDDELTLRVTNLSEEATDDDLRRMFGKYGMINRVYVAKDR 249
Query: 784 YTGDPRGFGFIQYVDPADAAEAKHHMEGY 698
TG PRGF F+ Y + A A M+G+
Sbjct: 250 DTGRPRGFAFVTYTLKSHAQAALEAMDGH 278
>sp|Q9Y4C8|RBM19_HUMAN Probable RNA-binding protein 19 OS=Homo sapiens GN=RBM19
PE=1 SV=2
Length = 960
Score = 60 bits (143), Expect = 3e-008
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Frame = -2
Query: 934 GSRYGGGGRDRDLPTS--LLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGF 761
G G + DL S L VRNL + +EDL + F ++GP+ +++ P D T P+GF
Sbjct: 386 GRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGF 445
Query: 760 GFIQYVDPADAAEAKHHMEGYLLLGRELTVV 668
FI ++ P A +A ++G + GR L V+
Sbjct: 446 AFITFMFPEHAVKAYSEVDGQVFQGRMLHVL 476
>sp|Q4R626|CA063_MACFA UPF0471 protein C1orf63 homolog OS=Macaca fascicularis
GN=QtsA-19294 PE=2 SV=1
Length = 296
Score = 59 bits (142), Expect = 4e-008
Identities = 49/153 (32%), Positives = 72/153 (47%), Gaps = 14/153 (9%)
Frame = -2
Query: 664 AEENRKKPTEMRTRDRGGRSNRFNDRRRSPPRYSRSPPPRRGGRTRSRSRDYNSPPPKRH 485
+ +R + +R R S+RF+ R RS R SRS R R R S R
Sbjct: 31 SSRSRSRSFSRSSRSRSRVSSRFSSRSRSRSRRSRSRSRSRRRHQRKYRRYSRSYSRSRS 90
Query: 484 QSRSVSPQERRYEKERSYSRSPPRNGSRARSGSREKVK------KSYSRSRSPR-----R 338
+SRS +ERRY R Y RSP R+ SR+RS SR + + ++Y+ +R R R
Sbjct: 91 RSRSRRYRERRYGFSRRYYRSPSRSRSRSRSRSRSRSRERSYYGRAYAMARGRRYYGFGR 150
Query: 337 SVSPRRNRSYTPEQARSPVPRQSRSPSPRGERN 239
+V P + + RS +SR+P E++
Sbjct: 151 TVYPEERSRW---RDRSRTRSRSRTPFRLSEKD 180
>sp|Q54PB2|MRD1_DICDI Multiple RNA-binding domain-containing protein 1
OS=Dictyostelium discoideum GN=mrd1 PE=3 SV=1
Length = 895
Score = 59 bits (142), Expect = 4e-008
Identities = 29/82 (35%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = -2
Query: 907 DRDLPTS--LLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPA 734
D D+ S + VRNL + ++EDL + F +FG + +I++P DY + +G FI Y+ P
Sbjct: 354 DEDVGESGRIFVRNLSYSTKEEDLEKVFSKFGKISEIHIPIDYDSKKSKGIAFILYLIPE 413
Query: 733 DAAEAKHHMEGYLLLGRELTVV 668
+A +A + M+G + GR + V+
Sbjct: 414 NAVQALNDMDGKVFQGRLIHVL 435
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,728,538,378
Number of Sequences: 518415
Number of Extensions: 28728538378
Number of Successful Extensions: 212045199
Number of sequences better than 0.0: 0
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