BLASTX 7.6.2
Query= UN07238 /QuerySize=1107
(1106 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G13570.1 | Symbols: SCL30A | SCL30a; RNA bindi... 467 6e-132
TAIR9_protein||AT1G55310.1 | Symbols: SR33, ATSCL33, SCL33 | SR3... 377 6e-105
TAIR9_protein||AT1G55310.2 | Symbols: SR33, ATSCL33, SCL33 | SR3... 345 3e-095
TAIR9_protein||AT3G55460.1 | Symbols: SCL30 | SCL30; RNA binding... 174 8e-044
TAIR9_protein||AT5G18810.1 | Symbols: SCL28 | SCL28; RNA binding... 154 1e-037
TAIR9_protein||AT5G64200.1 | Symbols: ATSC35, SC35 | ATSC35; RNA... 120 2e-027
TAIR9_protein||AT5G64200.2 | Symbols: ATSC35, SC35 | ATSC35; RNA... 120 2e-027
TAIR9_protein||AT1G07350.1 | Symbols: | transformer serine/argi... 81 1e-015
TAIR9_protein||AT3G11400.1 | Symbols: EIF3G1, ATEIF3G1 | eukaryo... 62 8e-010
TAIR9_protein||AT3G11400.2 | Symbols: EIF3G1, ATEIF3G1 | eukaryo... 62 8e-010
TAIR9_protein||AT1G60650.1 | Symbols: | glycine-rich RNA-bindin... 58 1e-008
TAIR9_protein||AT1G60650.2 | Symbols: | glycine-rich RNA-bindin... 58 1e-008
TAIR9_protein||AT3G08000.1 | Symbols: | RNA-binding protein, pu... 55 5e-008
TAIR9_protein||AT5G09880.1 | Symbols: | RNA recognition motif (... 54 2e-007
TAIR9_protein||AT5G06000.1 | Symbols: EIF3G2, ATEIF3G2 | EIF3G2;... 52 6e-007
TAIR9_protein||AT5G04600.1 | Symbols: | RNA recognition motif (... 51 1e-006
TAIR9_protein||AT1G07350.2 | Symbols: | transformer serine/argi... 51 1e-006
TAIR9_protein||AT4G13860.1 | Symbols: | glycine-rich RNA-bindin... 49 5e-006
>TAIR9_protein||AT3G13570.1 | Symbols: SCL30A | SCL30a; RNA binding / nucleic
acid binding / nucleotide binding | chr3:4429564-4431602 REVERSE
Length = 263
Score = 467 bits (1201), Expect = 6e-132
Identities = 235/269 (87%), Positives = 245/269 (91%), Gaps = 10/269 (3%)
Frame = -2
Query: 1009 MRGRSYTPSPPRGYGRRGRSPSPRGGSRYGGGGRDRDLPTSLLVRNLRHDCRQEDLRRPF 830
MRGRSYTPSPPRGYGRRGRSPSPRG R+ GG RD DLPTSLLVRNLRHDCRQEDLRRPF
Sbjct: 1 MRGRSYTPSPPRGYGRRGRSPSPRG--RF-GGSRDSDLPTSLLVRNLRHDCRQEDLRRPF 57
Query: 829 EQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMEGYLLLGRELTVVFAEENR 650
EQFGPVKDIYLPRDYYTGDPRGFGFIQ++DPADAAEAKH M+GYLLLGRELTVVFAEENR
Sbjct: 58 EQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVVFAEENR 117
Query: 649 KKPTEMRTRDRGGRSNRFNDRRRSPPRYSRSPPPRRGGRTRSRSRDYNSPPPKRHQSRSV 470
KKPTEMRTRDRGGRSNRF DRRRSPPRYSRSPPPRRG R+RSRSR YNSPP KRHQSRSV
Sbjct: 118 KKPTEMRTRDRGGRSNRFQDRRRSPPRYSRSPPPRRGRRSRSRSRGYNSPPAKRHQSRSV 177
Query: 469 SPQERRYEKERSYSRSPPRNGSRARSGSREKVKKSYSRSRSPRRSVSPRRNRSYTPEQAR 290
SPQ+RRYEKERSYSRSPP NGSR RSGS +VK S SRSPRRSVSPR+NRSYTPEQAR
Sbjct: 178 SPQDRRYEKERSYSRSPPHNGSRVRSGSPGRVK---SHSRSPRRSVSPRKNRSYTPEQAR 234
Query: 289 --SPVPRQSRSPS--PRGERNGDRSPSQ* 215
SPVPRQSRSP+ PRG +NGDRSPSQ*
Sbjct: 235 SQSPVPRQSRSPTPVPRGAQNGDRSPSQ* 263
>TAIR9_protein||AT1G55310.1 | Symbols: SR33, ATSCL33, SCL33 | SR33; RNA binding
/ protein binding | chr1:20630676-20632695 FORWARD
Length = 288
Score = 377 bits (968), Expect = 6e-105
Identities = 198/266 (74%), Positives = 221/266 (83%), Gaps = 13/266 (4%)
Frame = -2
Query: 1009 MRGRSYTPSPPRGYGRRGRSPSPRGGSRYGGGGRDRDLPTSLLVRNLRHDCRQEDLRRPF 830
MRGRSYTPSPPRGYGRRGRSPSPRG RY GGR RDLPTSLLVRNLRHDCRQEDLR+ F
Sbjct: 1 MRGRSYTPSPPRGYGRRGRSPSPRG--RY--GGRSRDLPTSLLVRNLRHDCRQEDLRKSF 56
Query: 829 EQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMEGYLLLGRELTVVFAEENR 650
EQFGPVKDIYLPRDYYTGDPRGFGF+Q++DPADAA+AKHHM+GYLLLGRELTVVFAEENR
Sbjct: 57 EQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENR 116
Query: 649 KKPTEMRTRDRGGRSNRFNDRRRSPPRY---SRSPPPRRGGRTRSRSRDYNSPPPKRHQS 479
KKPTEMR R+RGG RF DRRR+PPRY SRSPPPRR GR+RSRS DY SPPP+RH
Sbjct: 117 KKPTEMRARERGG--GRFRDRRRTPPRYYSRSRSPPPRR-GRSRSRSGDYYSPPPRRHHP 173
Query: 478 RSVSPQERRYEKERSYSRSPPRNGSRARSGSREKVKKSYSRSRSPRRSV--SPRRNRSYT 305
RS+SP+E RY+ RSYSRSP +GSR RS + + KS S S SPRRS+ SPRR+RS +
Sbjct: 174 RSISPREERYDGRRSYSRSPASDGSRGRSLTPVR-GKSRSLSPSPRRSISRSPRRSRSPS 232
Query: 304 PEQARSPVPRQSRSPSPRGERNGDRS 227
P++ RS PR+S S SPR R+ RS
Sbjct: 233 PKRNRSVSPRRSISRSPRRSRSPRRS 258
>TAIR9_protein||AT1G55310.2 | Symbols: SR33, ATSCL33, SCL33 | SR33; RNA binding
/ protein binding | chr1:20630676-20632567 FORWARD
Length = 221
Score = 345 bits (884), Expect = 3e-095
Identities = 176/225 (78%), Positives = 192/225 (85%), Gaps = 13/225 (5%)
Frame = -2
Query: 1009 MRGRSYTPSPPRGYGRRGRSPSPRGGSRYGGGGRDRDLPTSLLVRNLRHDCRQEDLRRPF 830
MRGRSYTPSPPRGYGRRGRSPSPRG RY GGR RDLPTSLLVRNLRHDCRQEDLR+ F
Sbjct: 1 MRGRSYTPSPPRGYGRRGRSPSPRG--RY--GGRSRDLPTSLLVRNLRHDCRQEDLRKSF 56
Query: 829 EQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMEGYLLLGRELTVVFAEENR 650
EQFGPVKDIYLPRDYYTGDPRGFGF+Q++DPADAA+AKHHM+GYLLLGRELTVVFAEENR
Sbjct: 57 EQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENR 116
Query: 649 KKPTEMRTRDRGGRSNRFNDRRRSPPRY---SRSPPPRRGGRTRSRSRDYNSPPPKRHQS 479
KKPTEMR R+RGG RF DRRR+PPRY SRSPPPRR GR+RSRS DY SPPP+RH
Sbjct: 117 KKPTEMRARERGG--GRFRDRRRTPPRYYSRSRSPPPRR-GRSRSRSGDYYSPPPRRHHP 173
Query: 478 RSVSPQERRYEKERSYSRSPPRNGSRARSGSREKVKKSYSRSRSP 344
RS+SP+E RY+ RSYSRSP +GSR RS + + K SRS SP
Sbjct: 174 RSISPREERYDGRRSYSRSPASDGSRGRSLTPVRGK---SRSLSP 215
>TAIR9_protein||AT3G55460.1 | Symbols: SCL30 | SCL30; RNA binding / nucleic acid
binding / nucleotide binding | chr3:20561024-20563502 FORWARD
Length = 263
Score = 174 bits (441), Expect = 8e-044
Identities = 120/269 (44%), Positives = 153/269 (56%), Gaps = 27/269 (10%)
Frame = -2
Query: 1000 RSYTP---SPP-RGYGRRGRSPSP----RG-GSRYGGGGRDRDLPTSLLVRNLRHDCRQE 848
R Y+P SPP RGYG RGRSP P RG G GGGGR SLLVRN+ DCR E
Sbjct: 2 RRYSPPYYSPPRRGYGGRGRSPPPPPPRRGYGGGGGGGGRRGSSHGSLLVRNIPLDCRPE 61
Query: 847 DLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMEGYLLLGRELTVV 668
+LR PFE+FGPV+D+Y+PRDYY+G PRGF F+++VD DA EA+ M GRE+TVV
Sbjct: 62 ELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFAGREITVV 121
Query: 667 FAEENRKKPTEM------RTRDRGGRSNRFNDRRRSPPRYSRSPPPRR--GGRTRSRSRD 512
A E+RK+P EM R+R+ G +R + R RS SRS PRR R+R RSR
Sbjct: 122 VASESRKRPEEMRVKTRTRSREPSGSRDRSHGRSRS-RSISRSRSPRRPSDSRSRYRSRS 180
Query: 511 YNSPPPKRHQSRSVSPQERRYEKERSYSRSPPRNGSRARSGSREKVKKSYSRSRSPRRSV 332
Y SP P+R ++ Y + RSY SP G+ A + R++ + R + +
Sbjct: 181 Y-SPAPRRRGGPPRGEEDENYSR-RSY--SPGYEGAAAAAPDRDRNGDNEIREKPGYEAE 236
Query: 331 SPRRNRSYTPEQARSPVPRQSRS--PSPR 251
RR +RSP +SRS SPR
Sbjct: 237 DRRRGGRAV---SRSPSGSRSRSVEVSPR 262
>TAIR9_protein||AT5G18810.1 | Symbols: SCL28 | SCL28; RNA binding / nucleic acid
binding / nucleotide binding | chr5:6268925-6271158 REVERSE
Length = 237
Score = 154 bits (387), Expect = 1e-037
Identities = 111/248 (44%), Positives = 135/248 (54%), Gaps = 41/248 (16%)
Frame = -2
Query: 1006 RGRSYTP-----SPPR---GY--GRRGRSPSPRGGSRYGGGGRDRDLPTSLLVRNLRHDC 857
R RSY+P SPPR GY R PS R G P+ LL+RNL D
Sbjct: 7 RSRSYSPRPRDRSPPRERKGYDDNRLRERPSSRDHESSG--------PSGLLIRNLPLDA 58
Query: 856 RQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMEGYLLLGREL 677
R DLR FE+FGP+KDIYLPR+YYTG+PRGFGF++Y DAAEA M ++ GRE+
Sbjct: 59 RPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRMNHKVIGGREI 118
Query: 676 TVVFAEENRKKPTEMRTRDRGGRSNRFNDRRRSPPRYSRSPPPRRGGRTRSRSRDYNSPP 497
+VFAEENRK P EMRT + G S R D +R+ R PRR R+ SRSR P
Sbjct: 119 AIVFAEENRKTPQEMRTTN--GTSGRHGDYKRTSHR-----SPRRRYRSHSRSRS----P 167
Query: 496 PKRHQSRSVSPQERRY---EKERSYSRSP-PRN-----GSRARSGSREKVK---KSYSRS 353
P+R S ++ Y + RS SRSP PRN RS E+V +S S
Sbjct: 168 PRRESRHSKVREDDLYSPRRRSRSISRSPLPRNEREYKSRNCRSPREERVLTPIRSRCLS 227
Query: 352 RSPRRSVS 329
RS RS+S
Sbjct: 228 RSRSRSLS 235
>TAIR9_protein||AT5G64200.1 | Symbols: ATSC35, SC35 | ATSC35; RNA binding /
nucleic acid binding / nucleotide binding | chr5:25681849-25683553
REVERSE
Length = 304
Score = 120 bits (299), Expect = 2e-027
Identities = 99/269 (36%), Positives = 136/269 (50%), Gaps = 51/269 (18%)
Frame = -2
Query: 889 SLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHH 710
SLLV N+ +DL F ++G V D+++PRD TGD RGF F++Y +A +A
Sbjct: 17 SLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVER 76
Query: 709 MEGYLLLGRELTVVFAE--ENRKK----------PTEMRTRDRGGRSNRFNDRRRSPPRY 566
++G ++ GRE+TV FA+ N +K P R+R R R +R R RSPPR
Sbjct: 77 LDGRVVDGREITVQFAKYGPNAEKISKGRVVEPPPKSRRSRSRSPRRSRSPRRSRSPPRR 136
Query: 565 ---SRSPPPRRGGRTRSRSRDYNSPPPKRHQSRSVSPQERRYEKERSY-----SRSPPRN 410
RS PRR R R +DY KR +SRS +ER EK+R + SRS +
Sbjct: 137 RSPRRSRSPRRRSRDDYREKDYR----KRSRSRSYDRRERHEEKDRDHRRRTRSRSASPD 192
Query: 409 GSRARSGSREKVKKSYSRS-------RSPRRSVSPRRN---RSYTPEQ---ARSPVPRQS 269
R G + +S+SRS RSPR S SP++ R +P++ RSP PR+S
Sbjct: 193 EKRRVRGRYDNESRSHSRSLSASPARRSPRSS-SPQKTSPAREVSPDKRSNERSPSPRRS 251
Query: 268 RSP--------SPRGE-----RNGDRSPS 221
SP SP E R+ +RSPS
Sbjct: 252 LSPRSPALQKASPSKEMSPERRSNERSPS 280
>TAIR9_protein||AT5G64200.2 | Symbols: ATSC35, SC35 | ATSC35; RNA binding /
nucleic acid binding / nucleotide binding | chr5:25681849-25683553
REVERSE
Length = 304
Score = 120 bits (299), Expect = 2e-027
Identities = 99/269 (36%), Positives = 136/269 (50%), Gaps = 51/269 (18%)
Frame = -2
Query: 889 SLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHH 710
SLLV N+ +DL F ++G V D+++PRD TGD RGF F++Y +A +A
Sbjct: 17 SLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVER 76
Query: 709 MEGYLLLGRELTVVFAE--ENRKK----------PTEMRTRDRGGRSNRFNDRRRSPPRY 566
++G ++ GRE+TV FA+ N +K P R+R R R +R R RSPPR
Sbjct: 77 LDGRVVDGREITVQFAKYGPNAEKISKGRVVEPPPKSRRSRSRSPRRSRSPRRSRSPPRR 136
Query: 565 ---SRSPPPRRGGRTRSRSRDYNSPPPKRHQSRSVSPQERRYEKERSY-----SRSPPRN 410
RS PRR R R +DY KR +SRS +ER EK+R + SRS +
Sbjct: 137 RSPRRSRSPRRRSRDDYREKDYR----KRSRSRSYDRRERHEEKDRDHRRRTRSRSASPD 192
Query: 409 GSRARSGSREKVKKSYSRS-------RSPRRSVSPRRN---RSYTPEQ---ARSPVPRQS 269
R G + +S+SRS RSPR S SP++ R +P++ RSP PR+S
Sbjct: 193 EKRRVRGRYDNESRSHSRSLSASPARRSPRSS-SPQKTSPAREVSPDKRSNERSPSPRRS 251
Query: 268 RSP--------SPRGE-----RNGDRSPS 221
SP SP E R+ +RSPS
Sbjct: 252 LSPRSPALQKASPSKEMSPERRSNERSPS 280
>TAIR9_protein||AT1G07350.1 | Symbols: | transformer serine/arginine-rich
ribonucleoprotein, putative | chr1:2257732-2260101 REVERSE
Length = 383
Score = 81 bits (198), Expect = 1e-015
Identities = 101/295 (34%), Positives = 129/295 (43%), Gaps = 28/295 (9%)
Frame = -2
Query: 1063 VRRFVQHFLNLRD*RLDSMRGRS-YTPSPPRGYGRRGRSPSPRGGSRYGGGGRDRDLP-- 893
V+R +++ L L + S RS Y+PS RRGRS S R SR D
Sbjct: 15 VQRVLEYPLRLENRSPMSYSRRSRYSPSLSPYDKRRGRSVS-RSLSRSPTRSVSSDAENP 73
Query: 892 -TSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAK 716
SL V L H + DL F + G V D++L D +T + RGFGFI DA
Sbjct: 74 GNSLYVTGLSHRVTERDLEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDANRCI 133
Query: 715 HHMEGYLLLGRELTVVFAEENRKKPTEMRTRDRGGRSNRFNDRRRSPPRYSRSPPPRRG- 539
++ +L GR +TV A R + T + G R+ R R P YS PRR
Sbjct: 134 RSLDHSVLQGRVITVEKARRRRGR-TPTPGKYLGLRTAR---GRHKSPSYS----PRRSV 185
Query: 538 --GRTRSRS------RDYNSPPPKRHQSRSVSP-QERRYEKERSYSRSPPRNGSRARSGS 386
R+RSRS R Y+ +R +S S SP RR S S SP +R R S
Sbjct: 186 SCSRSRSRSYSSDRGRSYSPSYGRRGRSSSYSPFYRRRRFYSPSRSPSPDDRYNRRRDRS 245
Query: 385 REKVKKSYSRSRSPRRSVSPRRNRSYTPEQARSPVPRQSRSPSPRGERNGDRSPS 221
+ RSRS R+ R Y + RS +SRS SPR R DRS S
Sbjct: 246 YSPYYRRRDRSRSYSRNCRARDRSPYYMRRYRS----RSRSYSPR-YRARDRSCS 295
>TAIR9_protein||AT3G11400.1 | Symbols: EIF3G1, ATEIF3G1 | eukaryotic translation
initiation factor 3G / eIF3g | chr3:3578536-3580366 FORWARD
Length = 295
Score = 62 bits (148), Expect = 8e-010
Identities = 41/106 (38%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Frame = -2
Query: 1003 GRSYTPSPPRGYGRRGR-SPSPRGG---SRYGGGGRDRDLPTSLLVRNLRHDCRQEDLRR 836
G S T S G G+ PS R G S G R R+ S+ V NL D R+ DL
Sbjct: 172 GESSTMSAAPGTGKAAYVPPSMRAGADRSAVGSDMRRRNDENSVRVTNLSEDTREPDLME 231
Query: 835 PFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMEGY 698
F FG V +Y+ D TG RGFGF+ +V DA A + + GY
Sbjct: 232 LFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGY 277
>TAIR9_protein||AT3G11400.2 | Symbols: EIF3G1, ATEIF3G1 | eukaryotic translation
initiation factor 3G / eIF3g | chr3:3578536-3580366 FORWARD
Length = 322
Score = 62 bits (148), Expect = 8e-010
Identities = 41/106 (38%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Frame = -2
Query: 1003 GRSYTPSPPRGYGRRGR-SPSPRGG---SRYGGGGRDRDLPTSLLVRNLRHDCRQEDLRR 836
G S T S G G+ PS R G S G R R+ S+ V NL D R+ DL
Sbjct: 199 GESSTMSAAPGTGKAAYVPPSMRAGADRSAVGSDMRRRNDENSVRVTNLSEDTREPDLME 258
Query: 835 PFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMEGY 698
F FG V +Y+ D TG RGFGF+ +V DA A + + GY
Sbjct: 259 LFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGY 304
>TAIR9_protein||AT1G60650.1 | Symbols: | glycine-rich RNA-binding protein,
putative | chr1:22340089-22342148 FORWARD
Length = 293
Score = 58 bits (138), Expect = 1e-008
Identities = 53/190 (27%), Positives = 78/190 (41%), Gaps = 22/190 (11%)
Frame = -2
Query: 907 DRDLPTSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADA 728
D +L + + V L D + L F+++G + + + TG PRGFGFI + D A
Sbjct: 7 DGNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGA 66
Query: 727 AEAKHHMEGYLLLGRELTVVFAE--------ENRKKPTEMRTRDRGGRSNRFNDRRRSPP 572
+A HM G L + ++V AE + KK +R +G F RR P
Sbjct: 67 DDAIKHMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKGTEDECFKCRR--PG 124
Query: 571 RYSRSPPPRRGGRTRSRSRDYNSPPPKRHQSRSVSPQERRY-----EKERSYSRSPPR-- 413
++R P R R + P R + + RY E+ER R R
Sbjct: 125 HWARDCPSTGDDRER-----FRVPLAMRSRIGDIDGHRDRYGDRDLEREREREREFDRYM 179
Query: 412 NGSRARSGSR 383
+G R R G R
Sbjct: 180 DGRRDRDGGR 189
>TAIR9_protein||AT1G60650.2 | Symbols: | glycine-rich RNA-binding protein,
putative | chr1:22340089-22342148 FORWARD
Length = 293
Score = 58 bits (138), Expect = 1e-008
Identities = 53/190 (27%), Positives = 78/190 (41%), Gaps = 22/190 (11%)
Frame = -2
Query: 907 DRDLPTSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADA 728
D +L + + V L D + L F+++G + + + TG PRGFGFI + D A
Sbjct: 7 DGNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGA 66
Query: 727 AEAKHHMEGYLLLGRELTVVFAE--------ENRKKPTEMRTRDRGGRSNRFNDRRRSPP 572
+A HM G L + ++V AE + KK +R +G F RR P
Sbjct: 67 DDAIKHMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKGTEDECFKCRR--PG 124
Query: 571 RYSRSPPPRRGGRTRSRSRDYNSPPPKRHQSRSVSPQERRY-----EKERSYSRSPPR-- 413
++R P R R + P R + + RY E+ER R R
Sbjct: 125 HWARDCPSTGDDRER-----FRVPLAMRSRIGDIDGHRDRYGDRDLEREREREREFDRYM 179
Query: 412 NGSRARSGSR 383
+G R R G R
Sbjct: 180 DGRRDRDGGR 189
>TAIR9_protein||AT3G08000.1 | Symbols: | RNA-binding protein, putative |
chr3:2555034-2555829 REVERSE
Length = 144
Score = 55 bits (132), Expect = 5e-008
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Frame = -2
Query: 892 TSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKH 713
+ L + L ++ L+ F FG V ++ + D +G RGFGF+ + + DA AK
Sbjct: 41 SKLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKD 100
Query: 712 HMEGYLLLGRELTVVFA-EENRKKPTEMRTRDRGGRSNRFNDR 587
M+G LLGR L + FA E R P + R G+S R +R
Sbjct: 101 AMDGKGLLGRPLRISFALERVRGGPVVV---PRLGKSKRERER 140
>TAIR9_protein||AT5G09880.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:3081646-3085179 REVERSE
Length = 528
Score = 54 bits (127), Expect = 2e-007
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 11/112 (9%)
Frame = -2
Query: 922 GGGGRDRDLPTSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQYV 743
G G DR L V NL + + LR+ FE FGPV+ + LP D TG +GFGFIQ+V
Sbjct: 259 GTGPADR----KLYVGNLHFNMSELQLRQIFEAFGPVELVQLPLDPETGQCKGFGFIQFV 314
Query: 742 DPADAAEAKHHMEGYL-LLGRELTVVFAEENRKKPTEMRTRDRGGRSNRFND 590
+ A+ + G L + GR + V ++ + T+D +S F+D
Sbjct: 315 QLEHSKAAQIALNGKLEIAGRTIKVSSVSDH------IGTQDSAPKSADFDD 360
>TAIR9_protein||AT5G06000.1 | Symbols: EIF3G2, ATEIF3G2 | EIF3G2; RNA binding /
translation initiation factor | chr5:1808169-1809742 FORWARD
Length = 309
Score = 52 bits (123), Expect = 6e-007
Identities = 33/87 (37%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Frame = -2
Query: 949 PSPRGGSRYGGGG---RDRDLPTSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYT 779
PS R G+ GG R R S+ V NL D R DL F FG V ++ D T
Sbjct: 184 PSMREGADRKAGGSDMRSRHDENSVRVTNLSEDTRGPDLMELFRPFGAVTRCHVAIDQKT 243
Query: 778 GDPRGFGFIQYVDPADAAEAKHHMEGY 698
RGFGF+ +V DA A + + GY
Sbjct: 244 SMSRGFGFVSFVSREDAQRAINKLNGY 270
>TAIR9_protein||AT5G04600.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:1323700-1325486 FORWARD
Length = 223
Score = 51 bits (121), Expect = 1e-006
Identities = 31/88 (35%), Positives = 42/88 (47%)
Frame = -2
Query: 892 TSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKH 713
T L + + H + ++ F QFG VK + + R+ TG + FGFIQ+ DP A A
Sbjct: 60 TVLYIGRIPHGFYETEIEAFFSQFGTVKRVRVARNKKTGKSKHFGFIQFEDPEVAEIAAG 119
Query: 712 HMEGYLLLGRELTVVFAEENRKKPTEMR 629
M YLL+ L V E KP R
Sbjct: 120 AMNDYLLMEHMLKVHVIEPENVKPNLWR 147
>TAIR9_protein||AT1G07350.2 | Symbols: | transformer serine/arginine-rich
ribonucleoprotein, putative | chr1:2258816-2259586 REVERSE
Length = 130
Score = 51 bits (120), Expect = 1e-006
Identities = 41/115 (35%), Positives = 52/115 (45%), Gaps = 4/115 (3%)
Frame = -2
Query: 1006 RGRSYTPSPPRGYGRRGRSPSPRGGSRYGGGGRDRDLP---TSLLVRNLRHDCRQEDLRR 836
R Y+PS RRGRS S R SR D SL V L H + DL
Sbjct: 5 RRSRYSPSLSPYDKRRGRSVS-RSLSRSPTRSVSSDAENPGNSLYVTGLSHRVTERDLED 63
Query: 835 PFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMEGYLLLGRELTV 671
F + G V D++L D +T + RGFGFI DA ++ +L GR +TV
Sbjct: 64 HFAKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDANRCIRSLDHSVLQGRVITV 118
>TAIR9_protein||AT4G13860.1 | Symbols: | glycine-rich RNA-binding protein,
putative | chr4:8022601-8023162 FORWARD
Length = 88
Score = 49 bits (115), Expect = 5e-006
Identities = 28/76 (36%), Positives = 39/76 (51%)
Frame = -2
Query: 898 LPTSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEA 719
+ T + V NL + LR F +G V D + RD YT RGFGF+ Y ++A A
Sbjct: 1 MATRVYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAA 60
Query: 718 KHHMEGYLLLGRELTV 671
M+G L GR ++V
Sbjct: 61 VSGMDGKELNGRRVSV 76
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,261,712,161
Number of Sequences: 33410
Number of Extensions: 4261712161
Number of Successful Extensions: 158233541
Number of sequences better than 0.0: 0
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