BLASTX 7.6.2
Query= UN07309 /QuerySize=1536
(1535 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G20590.1 | Symbols: | reticulon family protei... 565 3e-161
TAIR9_protein||AT2G20590.2 | Symbols: | reticulon family protei... 415 5e-116
TAIR9_protein||AT4G28430.1 | Symbols: | reticulon family protei... 390 1e-108
TAIR9_protein||AT5G58000.1 | Symbols: | LOCATED IN: endoplasmic... 174 1e-043
>TAIR9_protein||AT2G20590.1 | Symbols: | reticulon family protein |
chr2:8867243-8869166 REVERSE
Length = 432
Score = 565 bits (1455), Expect = 3e-161
Identities = 326/450 (72%), Positives = 357/450 (79%), Gaps = 50/450 (11%)
Frame = +3
Query: 132 PPYHLPSNPKSASRSKEEEKEEAPPNLVSLELVCVSPKSKDTPPPRASSSPSP------- 290
PPYH SN KSASR ++ PPNL SL+LV SP +TP P SSP P
Sbjct: 5 PPYH-RSNTKSASRLQDSSN---PPNL-SLDLVLSSP---NTPNP---SSPVPLRDILLL 53
Query: 291 ---PLRKSKTRLEDRLQMASEDNAAALVVVRKQGKGKGGQKGPLASPRNNPRRSRRRSEP 461
PLRKS+TRL DRL+M SED A+ VVRK+GKGKGGQK LASPR NPRRSRRRSE
Sbjct: 54 PPSPLRKSRTRLSDRLEMTSED---AMAVVRKRGKGKGGQKSLLASPR-NPRRSRRRSEA 109
Query: 462 VAAEKEANVVVDEAPK--PRKRKPNNVRPKKEKQT------SSSNLPNDDDASCQSDLNR 617
V EKEAN+V++E K PRKRK N RPKK+KQ+ SSS+LPN +CQSDLN
Sbjct: 110 V-EEKEANLVIEEIVKLPPRKRKTNG-RPKKDKQSSAPPLCSSSDLPN----TCQSDLNL 163
Query: 618 IGEIISDLVMWRDVAKSTLWFGFGCLSFLSSSFANGLNFSLFSALSNLGLVLLCASFLSN 797
IGEIISDLVMWRDVAKSTLWFGFGCLSFLSS FA G+NFS+FSA+SNLGLVLLC SFLSN
Sbjct: 164 IGEIISDLVMWRDVAKSTLWFGFGCLSFLSSCFAKGVNFSVFSAVSNLGLVLLCGSFLSN 223
Query: 798 TLLSQRKNEETKREFHVSEDGVLRLSRRFLPAANFLISKTTVLFSGEPSMTLKVTPFLLI 977
T L QRKNE+TKR FHVSED VLR +RR LPA NF ISKT+ LFSGEPSMTLKVTPFLL+
Sbjct: 224 T-LCQRKNEDTKRAFHVSEDDVLRSARRVLPATNFFISKTSELFSGEPSMTLKVTPFLLL 282
Query: 978 GAEYGHLITFWRLSAFGFFLSFTVPKLYSCYTHQISQKVERVKTSLGEAWEMCSHKKILA 1157
GAEYGHLIT WRLSAFGFFLSFT+PKLYSCYTHQISQKVERVKT +GEAW +CSHKKILA
Sbjct: 283 GAEYGHLITLWRLSAFGFFLSFTIPKLYSCYTHQISQKVERVKTRIGEAWGVCSHKKILA 342
Query: 1158 GSAVTAFWNLTSIRTRIFAVFIILVIFRYRRQNLVQLNSEEAVPVENEKQEE---EEEET 1328
GSAVTAFWNLTSIRTRIFAVFIILVIFRYRRQNL QL EE PVENE++EE +EEET
Sbjct: 343 GSAVTAFWNLTSIRTRIFAVFIILVIFRYRRQNL-QLTPEEVEPVENEQEEETLPQEEET 401
Query: 1329 LPQEEET------QQQPQEEQALAMVVAET 1400
+PQEEET Q QP EE+AL +VVAET
Sbjct: 402 VPQEEETVPQEEEQTQPSEERALVVVVAET 431
>TAIR9_protein||AT2G20590.2 | Symbols: | reticulon family protein |
chr2:8867781-8869166 REVERSE
Length = 324
Score = 415 bits (1065), Expect = 5e-116
Identities = 242/340 (71%), Positives = 265/340 (77%), Gaps = 40/340 (11%)
Frame = +3
Query: 132 PPYHLPSNPKSASRSKEEEKEEAPPNLVSLELVCVSPKSKDTPPPRASSSPSP------- 290
PPYH SN KSASR ++ PPNL SL+LV SP +TP P SSP P
Sbjct: 5 PPYH-RSNTKSASRLQDSSN---PPNL-SLDLVLSSP---NTPNP---SSPVPLRDILLL 53
Query: 291 ---PLRKSKTRLEDRLQMASEDNAAALVVVRKQGKGKGGQKGPLASPRNNPRRSRRRSEP 461
PLRKS+TRL DRL+M SED A+ VVRK+GKGKGGQK LASPR NPRRSRRRSE
Sbjct: 54 PPSPLRKSRTRLSDRLEMTSED---AMAVVRKRGKGKGGQKSLLASPR-NPRRSRRRSEA 109
Query: 462 VAAEKEANVVVDEAPK--PRKRKPNNVRPKKEKQT------SSSNLPNDDDASCQSDLNR 617
V EKEAN+V++E K PRKRK N RPKK+KQ+ SSS+LPN +CQSDLN
Sbjct: 110 V-EEKEANLVIEEIVKLPPRKRKTNG-RPKKDKQSSAPPLCSSSDLPN----TCQSDLNL 163
Query: 618 IGEIISDLVMWRDVAKSTLWFGFGCLSFLSSSFANGLNFSLFSALSNLGLVLLCASFLSN 797
IGEIISDLVMWRDVAKSTLWFGFGCLSFLSS FA G+NFS+FSA+SNLGLVLLC SFLSN
Sbjct: 164 IGEIISDLVMWRDVAKSTLWFGFGCLSFLSSCFAKGVNFSVFSAVSNLGLVLLCGSFLSN 223
Query: 798 TLLSQRKNEETKREFHVSEDGVLRLSRRFLPAANFLISKTTVLFSGEPSMTLKVTPFLLI 977
T L QRKNE+TKR FHVSED VLR +RR LPA NF ISKT+ LFSGEPSMTLKVTPFLL+
Sbjct: 224 T-LCQRKNEDTKRAFHVSEDDVLRSARRVLPATNFFISKTSELFSGEPSMTLKVTPFLLL 282
Query: 978 GAEYGHLITFWRLSAFGFFLSFTVPKLYSCYTHQISQKVE 1097
GAEYGHLIT WRLSAFGFFLSFT+PKLYSCYTHQISQK E
Sbjct: 283 GAEYGHLITLWRLSAFGFFLSFTIPKLYSCYTHQISQKGE 322
>TAIR9_protein||AT4G28430.1 | Symbols: | reticulon family protein |
chr4:14057846-14059772 FORWARD
Length = 458
Score = 390 bits (1001), Expect = 1e-108
Identities = 226/417 (54%), Positives = 282/417 (67%), Gaps = 23/417 (5%)
Frame = +3
Query: 204 PNLVSLELVCVSPKSKDTPPPRASSSPSPPLRKSKTRLEDRLQMASEDNAAALVVVRKQG 383
P+ VSL SP S T SPS PLRKS+TRL +R M AA V ++
Sbjct: 51 PSPVSLS----SPSSPVTLREILLLSPS-PLRKSRTRLSNRFDM----EAAEAAVTARRS 101
Query: 384 KGKGGQKGPLASPR-NNPRRSRRRSEPVAAEKEAN----VVVDEAPKPRKRKPNNVRPKK 548
K KGGQ G LASP N RRSR RSE + KE VV DE + ++++ R KK
Sbjct: 102 KTKGGQNGLLASPSPRNFRRSRLRSEAMVDTKENTEPIVVVTDEKKQNQRKQKKLGRSKK 161
Query: 549 EKQTS----SSNLPNDDDAS--CQSDLNRIGEIISDLVMWRDVAKSTLWFGFGCLSFLSS 710
EK +S +S P+ D CQ DL RI E ISDL+MWRDVAKSTLWFGFGC+ FLS+
Sbjct: 162 EKHSSVPLLASPSPSSDQPQDVCQGDLERIRENISDLIMWRDVAKSTLWFGFGCICFLST 221
Query: 711 SF-ANGLNFSLFSALSNLGLVLLCASFLSNTLLSQRKNEETKREFHVSEDGVLRLSRRFL 887
F A G NFS+FSA+S LGL+ L SFLSNT L QR EE +RE +SED VLR++RR L
Sbjct: 222 CFAAKGFNFSVFSAISYLGLLFLGVSFLSNT-LRQRVTEEARRELKLSEDDVLRIARRML 280
Query: 888 PAANFLISKTTVLFSGEPSMTLKVTPFLLIGAEYGHLITFWRLSAFGFFLSFTVPKLYSC 1067
P N ISKT+ LFSGEP+MTLKV PF+L+GAEYG+LIT WRL AFGFFLSFT+PKLYSC
Sbjct: 281 PITNLAISKTSELFSGEPAMTLKVAPFVLMGAEYGYLITLWRLCAFGFFLSFTIPKLYSC 340
Query: 1068 YTHQISQKVERVKTSLGEAWEMCSHKKILAGSAVTAFWNLTSIRTRIFAVFIILVIFRYR 1247
Y Q++QKVE + EAW +C+HKK +AGSAVTAFWNLTS++TR AVFII+V+ RYR
Sbjct: 341 YASQLNQKVECAQRRFVEAWGVCTHKKFVAGSAVTAFWNLTSLKTRFIAVFIIVVVIRYR 400
Query: 1248 RQNLVQLNSEEAVPVENEKQEEEEEETLPQEEETQQQPQEEQALAMVVAETEGSKKL 1418
RQNL QL+SE+ + +++ E++ P+++ T + EE+ ++VAET+ KKL
Sbjct: 401 RQNL-QLDSEDEEEKKQQEKTHPEQQKSPEDKSTSPRSAEEEQALVLVAETKAPKKL 456
>TAIR9_protein||AT5G58000.1 | Symbols: | LOCATED IN: endoplasmic reticulum,
chloroplast; CONTAINS InterPro DOMAIN/s: Reticulon
(InterPro:IPR003388); BEST Arabidopsis thaliana protein match is:
reticulon family protein (TAIR:AT4G28430.1); Has 1047 Blast hits to
1034 proteins in 125 species: Archae - 0; Bacteria - 2; Metazoa - 715;
Fungi - 46; Plants - 58; Viruses - 4; Other Eukaryotes - 222 (source:
NCBI BLink). | chr5:23477416-23479496 FORWARD
Length = 488
Score = 174 bits (441), Expect = 1e-043
Identities = 99/290 (34%), Positives = 164/290 (56%), Gaps = 8/290 (2%)
Frame = +3
Query: 510 PRKRKPNNVRPKKEKQTSSSNLPNDDDASCQSDLNRIGEIISDLVMWRDVAKSTLWFGFG 689
P ++ +V TSS++ + + + +++ ++ DLVMWRDV++STL FGFG
Sbjct: 191 PVIKRATSVYSAPPNSTSSTDRFAEQEDNFTHSQSKLQSLV-DLVMWRDVSRSTLVFGFG 249
Query: 690 CLSFLSSSFANGLNFSLFSALSNLGLVLLCASFLSNTLLSQRKNEETKRE-FHVSEDGVL 866
+SSS+AN LNFS S ++ +GL+ L F+ +L+ + EE + + V E+ V
Sbjct: 250 TFLIISSSYANDLNFSFISVVAYMGLIYLGLMFVLKSLIHRGMVEEERHKVVGVREEDVK 309
Query: 867 RLSRRFLPAANFLISKTTVLFSGEPSMTLKVTPFLLIGAEYGHLITFWRLSAFGFFLSFT 1046
R+ R +P N + + LFSG+PS TLK+ L + A G IT W L+ FGF +FT
Sbjct: 310 RMLRLIMPYLNESLHQLRALFSGDPSTTLKMGVVLFVLARCGSSITLWNLAKFGFLGAFT 369
Query: 1047 VPKLYSCYTHQISQKVERVKTSLGEAWEMCSHKKILAGSAVTAFWNLTSIRTRIFAVFII 1226
+PK++ Y+ S +AWE C+HKK +A + T WNL+S+ R++A F++
Sbjct: 370 IPKIFISYSTHFSAYGNFWMRRFRDAWESCNHKKAVALALFTLVWNLSSVTARVWAAFML 429
Query: 1227 LVIFRYRRQNLVQLNSEEAVPVENEKQEEEEEETLPQEEETQQQPQEEQA 1376
LV FRY + ++ + ++++ + EEEE +EE+ Q P+ ++A
Sbjct: 430 LVAFRYYQHKMIWTTDQ----ADDDEDDNEEEEA--EEEKEQVPPKHKRA 473
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,351,121,987
Number of Sequences: 33410
Number of Extensions: 4351121987
Number of Successful Extensions: 163286803
Number of sequences better than 0.0: 0
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