BLASTX 7.6.2
Query= UN07331 /QuerySize=574
(573 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G34555.1 | Symbols: | 40S ribosomal protein S... 206 9e-054
TAIR9_protein||AT4G39200.1 | Symbols: | 40S ribosomal protein S... 198 2e-051
TAIR9_protein||AT2G21580.1 | Symbols: | 40S ribosomal protein S... 198 3e-051
TAIR9_protein||AT4G39200.2 | Symbols: | 40S ribosomal protein S... 192 2e-049
TAIR9_protein||AT2G21580.2 | Symbols: | 40S ribosomal protein S... 191 3e-049
TAIR9_protein||AT2G16360.1 | Symbols: | 40S ribosomal protein S... 148 3e-036
>TAIR9_protein||AT4G34555.1 | Symbols: | 40S ribosomal protein S25, putative |
chr4:16504381-16505339 REVERSE
Length = 109
Score = 206 bits (523), Expect = 9e-054
Identities = 103/109 (94%), Positives = 105/109 (96%)
Frame = +1
Query: 91 MAPKKDKVPLPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 270
MAPKKDKVP PSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60
Query: 271 ITPSILSDRLRINGSLARKAIRDLMAKGTIRMVSTHSSQQIYTRATHN* 417
ITPSILSDRLRINGSLAR+AIR+LMAKGTIRMVS HSSQQIYTRATH *
Sbjct: 61 ITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATHG* 109
>TAIR9_protein||AT4G39200.1 | Symbols: | 40S ribosomal protein S25 (RPS25E) |
chr4:18257464-18258464 FORWARD
Length = 109
Score = 198 bits (503), Expect = 2e-051
Identities = 98/109 (89%), Positives = 104/109 (95%)
Frame = +1
Query: 91 MAPKKDKVPLPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 270
MAPKKDKVP PSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLL+EAPKFKL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60
Query: 271 ITPSILSDRLRINGSLARKAIRDLMAKGTIRMVSTHSSQQIYTRATHN* 417
ITPSILSDR+RINGSLAR+AIR+LMAKG IRMV+ HSSQQIYTRAT+ *
Sbjct: 61 ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT* 109
>TAIR9_protein||AT2G21580.1 | Symbols: | 40S ribosomal protein S25 (RPS25B) |
chr2:9236629-9237510 FORWARD
Length = 109
Score = 198 bits (501), Expect = 3e-051
Identities = 98/109 (89%), Positives = 103/109 (94%)
Frame = +1
Query: 91 MAPKKDKVPLPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 270
MAPKKDKVP PSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL+EAPKFKL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60
Query: 271 ITPSILSDRLRINGSLARKAIRDLMAKGTIRMVSTHSSQQIYTRATHN* 417
ITPSILSDR+RINGSLAR+AIR+LMAKG IRMVS HSSQQIYTRAT+ *
Sbjct: 61 ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT* 109
>TAIR9_protein||AT4G39200.2 | Symbols: | 40S ribosomal protein S25 (RPS25E) |
chr4:18257464-18258464 FORWARD
Length = 108
Score = 192 bits (486), Expect = 2e-049
Identities = 97/109 (88%), Positives = 103/109 (94%), Gaps = 1/109 (0%)
Frame = +1
Query: 91 MAPKKDKVPLPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 270
MAPKKDKVP PSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQATYDKLL+EAPKFKL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQ-KKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 59
Query: 271 ITPSILSDRLRINGSLARKAIRDLMAKGTIRMVSTHSSQQIYTRATHN* 417
ITPSILSDR+RINGSLAR+AIR+LMAKG IRMV+ HSSQQIYTRAT+ *
Sbjct: 60 ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT* 108
>TAIR9_protein||AT2G21580.2 | Symbols: | 40S ribosomal protein S25 (RPS25B) |
chr2:9236629-9237510 FORWARD
Length = 108
Score = 191 bits (484), Expect = 3e-049
Identities = 97/109 (88%), Positives = 102/109 (93%), Gaps = 1/109 (0%)
Frame = +1
Query: 91 MAPKKDKVPLPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 270
MAPKKDKVP PSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQ TYDKLL+EAPKFKL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQ-KKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 59
Query: 271 ITPSILSDRLRINGSLARKAIRDLMAKGTIRMVSTHSSQQIYTRATHN* 417
ITPSILSDR+RINGSLAR+AIR+LMAKG IRMVS HSSQQIYTRAT+ *
Sbjct: 60 ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT* 108
>TAIR9_protein||AT2G16360.1 | Symbols: | 40S ribosomal protein S25 (RPS25A) |
chr2:7076713-7077366 REVERSE
Length = 126
Score = 148 bits (372), Expect = 3e-036
Identities = 76/83 (91%), Positives = 79/83 (95%)
Frame = +1
Query: 160 KKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKLITPSILSDRLRINGSLARKAIRD 339
+ +K SKGKQKEKVNNMVLFDQATYDKL+SEAPKFKLITPSILSDRLRINGSLARKAIRD
Sbjct: 40 ESRKRSKGKQKEKVNNMVLFDQATYDKLMSEAPKFKLITPSILSDRLRINGSLARKAIRD 99
Query: 340 LMAKGTIRMVSTHSSQQIYTRAT 408
LM KGTIRMVSTHSSQQI TRAT
Sbjct: 100 LMVKGTIRMVSTHSSQQINTRAT 122
Score = 49 bits (116), Expect = 1e-006
Identities = 20/32 (62%), Positives = 25/32 (78%)
Frame = +2
Query: 95 HRRRTKFHYHPLNPPNRAAESRRRRSGARESK 190
H+RRTK H+HPLNPPN AESR+R G ++ K
Sbjct: 21 HQRRTKSHHHPLNPPNPVAESRKRSKGKQKEK 52
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,351,121,987
Number of Sequences: 33410
Number of Extensions: 4351121987
Number of Successful Extensions: 163286803
Number of sequences better than 0.0: 0
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