BLASTX 7.6.2
Query= UN07446 /QuerySize=1497
(1496 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O60176|YG41_SCHPO Uncharacterized RNA-binding protein C23E6.0... 218 1e-055
sp|O13759|CSX1_SCHPO RNA-binding post-transcriptional regulator ... 213 3e-054
sp|Q01085|TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 P... 152 9e-036
sp|P52912|TIA1_MOUSE Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 P... 143 3e-033
sp|P31483|TIA1_HUMAN Nucleolysin TIA-1 isoform p40 OS=Homo sapie... 140 3e-032
sp|P70318|TIAR_MOUSE Nucleolysin TIAR OS=Mus musculus GN=Tial1 P... 138 1e-031
sp|P32831|NGR1_YEAST Negative growth regulatory protein NGR1 OS=... 96 6e-019
sp|Q9ZUU4|ROC1_ARATH Ribonucleoprotein At2g37220, chloroplastic ... 93 5e-018
sp|Q00539|NAM8_YEAST Protein NAM8 OS=Saccharomyces cerevisiae GN... 91 3e-017
sp|Q86U06|RBM23_HUMAN Probable RNA-binding protein 23 OS=Homo sa... 77 3e-013
sp|Q14498|RBM39_HUMAN RNA-binding protein 39 OS=Homo sapiens GN=... 76 5e-013
sp|Q8VH51|RBM39_MOUSE RNA-binding protein 39 OS=Mus musculus GN=... 76 5e-013
sp|Q5RC80|RBM39_PONAB RNA-binding protein 39 OS=Pongo abelii GN=... 76 5e-013
sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitocho... 75 1e-012
sp|Q6DRG1|RBM42_DANRE RNA-binding protein 42 OS=Danio rerio GN=r... 70 5e-011
sp|Q66KL9|RBM42_XENTR RNA-binding protein 42 OS=Xenopus tropical... 69 6e-011
sp|Q0P5L0|RBM42_BOVIN RNA-binding protein 42 OS=Bos taurus GN=RB... 69 8e-011
sp|Q9BTD8|RBM42_HUMAN RNA-binding protein 42 OS=Homo sapiens GN=... 69 8e-011
sp|Q91V81|RBM42_MOUSE RNA-binding protein 42 OS=Mus musculus GN=... 69 8e-011
>sp|O60176|YG41_SCHPO Uncharacterized RNA-binding protein C23E6.01c
OS=Schizosaccharomyces pombe GN=SPBC23E6.01c PE=1 SV=2
Length = 473
Score = 218 bits (553), Expect = 1e-055
Identities = 123/286 (43%), Positives = 172/286 (60%), Gaps = 6/286 (2%)
Frame = +3
Query: 489 TLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTNQSEGYGFVEFLSRSAAEEVLQS 668
TLW+G+L W+ E ++ ++ + VK+IRN+ T + GY FVEF S A + S
Sbjct: 94 TLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSAM-S 152
Query: 669 YSGVTMPNADQPFRLNWASFSTGEKRASENGGPDLSVFVGDLAPDVTDAVLLETFAG-YQ 845
+ +P + F+LNWAS G + S + + S+FVGDL+P+V + + FA Y
Sbjct: 153 MNNKPIPGTNHLFKLNWAS-GGGLREKSISKASEYSIFVGDLSPNVNEFDVYSLFASRYN 211
Query: 846 SVKGAKVVIDSNTGRSKGYGFVRFGDESERSRALTEMNGAFCLSRQMRVGIATPK-RAAA 1022
S K AK++ D T S+GYGFVRF DE+++ AL EM G C R +RVG+ATPK +A
Sbjct: 212 SCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRVGLATPKSKAHV 271
Query: 1023 YGQQN-GSQALTLAGGHGGNGSVSD-GESNNSTIFVGGIDADVTEEDLRQPFSQFGEVVS 1196
+ N ++ G + V ++ NST+FVGG+ V+EE+L+ F FGE+V
Sbjct: 272 FSPVNVVPVSMPPVGFYSAAQPVPQFADTANSTVFVGGLSKFVSEEELKYLFQNFGEIVY 331
Query: 1197 VKIPVGKGCGFVQFGNRQSAEEAIGNLNGTVIGKNTVRLSWGRSPN 1334
VKIP GKGCGFVQF NRQSAE AI L G +G + +RLSWGR+ N
Sbjct: 332 VKIPPGKGCGFVQFVNRQSAEIAINQLQGYPLGNSRIRLSWGRNQN 377
>sp|O13759|CSX1_SCHPO RNA-binding post-transcriptional regulator csx1
OS=Schizosaccharomyces pombe GN=csx1 PE=1 SV=1
Length = 632
Score = 213 bits (542), Expect = 3e-054
Identities = 108/284 (38%), Positives = 167/284 (58%), Gaps = 4/284 (1%)
Frame = +3
Query: 489 TLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTNQSE--GYGFVEFLSRSAAEEVL 662
TLW+GDL WMD T++ ++ NE +VKV+R+K ++ Y FV+F S +AAE L
Sbjct: 86 TLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSSETLISYCFVQFSSSAAAERAL 145
Query: 663 QSYSGVTMPNADQPFRLNWASFSTGEKRASENGGPDLSVFVGDLAPDVTDAVLLETFAG- 839
Y+ +P A F+LNWA+ + + P+ S+FVGDL P D+ L TF
Sbjct: 146 MKYNNTMIPGAHCTFKLNWATGGGIQHNNFVSRDPEFSIFVGDLLPTTEDSDLFMTFRSI 205
Query: 840 YQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSRALTEMNGAFCLSRQMRVGIATPKRAA 1019
Y S AK+++D TG S+ YGFVRF E E+ AL M G C R +R+ +A+PK A
Sbjct: 206 YPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQGYLCQGRPLRISVASPKSRA 265
Query: 1020 AYGQQNGSQAL-TLAGGHGGNGSVSDGESNNSTIFVGGIDADVTEEDLRQPFSQFGEVVS 1196
+ + + T N + + N+T+FVGG+ ++++E+DL+ F FG +++
Sbjct: 266 SIAADSALGIVPTSTSNRQPNQDLCSMDPLNTTVFVGGLASNLSEKDLQVCFQPFGRILN 325
Query: 1197 VKIPVGKGCGFVQFGNRQSAEEAIGNLNGTVIGKNTVRLSWGRS 1328
+KIP GKGCGFVQ+ + +AE+AI + G ++G + +RL+WG +
Sbjct: 326 IKIPFGKGCGFVQYSEKSAAEKAINTMQGALVGTSHIRLAWGHN 369
>sp|Q01085|TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=1
Length = 375
Score = 152 bits (382), Expect = 9e-036
Identities = 101/317 (31%), Positives = 160/317 (50%), Gaps = 22/317 (6%)
Frame = +3
Query: 486 KTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTNQSEGYGFVEFLSRSAAEEVLQ 665
+TL+VG+L + E + FS S K+I +N + Y FVEF A L
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 66
Query: 666 SYSGVTMPNADQPFRLNWASFSTGEKRASENGGPDLSVFVGDLAPDVTDAVLLETFAGYQ 845
+ +G + + ++NWA+ + +K+ + N VFVGDL+P++T + FA +
Sbjct: 67 AMNGRKI--LGKEVKVNWATTPSSQKKDTSN---HFHVFVGDLSPEITTEDIKSAFAPFG 121
Query: 846 SVKGAKVVIDSNTGRSKGYGFVRFGDESERSRALTEMNGAFCLSRQMRVGIATPKRAAAY 1025
+ A+VV D TG+SKGYGFV F ++ + A+ M G + RQ+R AT K A
Sbjct: 122 KISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPK 181
Query: 1026 G-QQNGSQALTLAGGHGGNGSVSDGESNNSTIFVGGIDADVTEEDLRQPFSQFGEVVSVK 1202
Q+N ++ L V+ N T++ GGI + +T++ +RQ FS FG+++ ++
Sbjct: 182 STQENNTKQLRF------EDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIR 235
Query: 1203 IPVGKGCGFVQFGNRQSAEEAIGNLNGTVIGKNTVRLSWGR-SPNRQWRGDQ-------Q 1358
+ KG FV+F +SA AI ++NGT I + V+ WG+ SP+ Q Q
Sbjct: 236 VFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQ 295
Query: 1359 WNGGYSRGQGYSNGYAN 1409
W+ Y Q Y AN
Sbjct: 296 WSQVYGNPQQYGQYMAN 312
>sp|P52912|TIA1_MOUSE Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 PE=1 SV=1
Length = 386
Score = 143 bits (360), Expect = 3e-033
Identities = 90/289 (31%), Positives = 154/289 (53%), Gaps = 19/289 (6%)
Frame = +3
Query: 486 KTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTNQSEGYGFVEFLSRSAAEEVLQ 665
KTL+VG+L + E + FS + K+I + T ++ Y FVEF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 666 SYSGVTMPNADQPFRLNWASFSTGEKR--------ASENGGPDLSVFVGDLAPDVTDAVL 821
+ +G + + ++NWA+ + +K+ +++ VFVGDL+P++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 822 LETFAGYQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSRALTEMNGAFCLSRQMRVGIA 1001
FA + + A+VV D TG+SKGYGFV F ++ + A+ +M G + RQ+R A
Sbjct: 123 KAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 182
Query: 1002 TPKRAAAYG-QQNGSQALTLAGGHGGNGSVSDGESNNSTIFVGGIDADVTEEDLRQPFSQ 1178
T K A ++ ++ L+ + VS NN T++ GG+ + +TE+ +RQ FS
Sbjct: 183 TRKPPAPKSTYESNTKQLSY------DEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSP 236
Query: 1179 FGEVVSVKIPVGKGCGFVQFGNRQSAEEAIGNLNGTVIGKNTVRLSWGR 1325
FG+++ +++ KG FV+F + +SA AI ++NGT I + V+ WG+
Sbjct: 237 FGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGK 285
>sp|P31483|TIA1_HUMAN Nucleolysin TIA-1 isoform p40 OS=Homo sapiens GN=TIA1 PE=1
SV=3
Length = 386
Score = 140 bits (352), Expect = 3e-032
Identities = 88/289 (30%), Positives = 154/289 (53%), Gaps = 19/289 (6%)
Frame = +3
Query: 486 KTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTNQSEGYGFVEFLSRSAAEEVLQ 665
KTL+VG+L + E + FS + K+I + T ++ Y FVEF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64
Query: 666 SYSGVTMPNADQPFRLNWASFSTGEKR--------ASENGGPDLSVFVGDLAPDVTDAVL 821
+ +G + + ++NWA+ + +K+ +++ VFVGDL+P++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 822 LETFAGYQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSRALTEMNGAFCLSRQMRVGIA 1001
FA + + A+VV D TG+SKGYGFV F ++ + A+ +M G + RQ+R A
Sbjct: 123 KAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 182
Query: 1002 TPKRAAAYG-QQNGSQALTLAGGHGGNGSVSDGESNNSTIFVGGIDADVTEEDLRQPFSQ 1178
T K A ++ ++ L+ + V+ +N T++ GG+ + +TE+ +RQ FS
Sbjct: 183 TRKPPAPKSTYESNTKQLSY------DEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSP 236
Query: 1179 FGEVVSVKIPVGKGCGFVQFGNRQSAEEAIGNLNGTVIGKNTVRLSWGR 1325
FG+++ +++ KG FV+F + +SA AI ++NGT I + V+ WG+
Sbjct: 237 FGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGK 285
>sp|P70318|TIAR_MOUSE Nucleolysin TIAR OS=Mus musculus GN=Tial1 PE=2 SV=1
Length = 392
Score = 138 bits (346), Expect = 1e-031
Identities = 89/281 (31%), Positives = 142/281 (50%), Gaps = 20/281 (7%)
Frame = +3
Query: 594 QTNQSEGYGFVEFLSRSAAEEVLQSYSGVTMPNADQPFRLNWASFSTGEKRASENGGPDL 773
Q ++ Y FVEF A L + +G + + ++NWA+ + +K+ + N
Sbjct: 60 QHTSNDPYCFVEFYEHRDAAAALAAMNGRKI--LGKEVKVNWATTPSSQKKDTSN---HF 114
Query: 774 SVFVGDLAPDVTDAVLLETFAGYQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSRALTE 953
VFVGDL+P++T + FA + + A+VV D TG+SKGYGFV F ++ + A+
Sbjct: 115 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 174
Query: 954 MNGAFCLSRQMRVGIATPKRAAAYG-QQNGSQALTLAGGHGGNGSVSDGESNNSTIFVGG 1130
M G + RQ+R AT K A Q+ ++ L V+ N T++ GG
Sbjct: 175 MGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRF------EDVVNQSSPKNCTVYCGG 228
Query: 1131 IDADVTEEDLRQPFSQFGEVVSVKIPVGKGCGFVQFGNRQSAEEAIGNLNGTVIGKNTVR 1310
I + +T++ +RQ FS FG+++ +++ KG FV+F +SA AI ++NGT I + V+
Sbjct: 229 IASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 288
Query: 1311 LSWGR-SPNRQWRGDQ-------QWNGGYSRGQGYSNGYAN 1409
WG+ SP+ Q QW+ Y Q Y AN
Sbjct: 289 CYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMAN 329
>sp|P32831|NGR1_YEAST Negative growth regulatory protein NGR1 OS=Saccharomyces
cerevisiae GN=NGR1 PE=1 SV=2
Length = 672
Score = 96 bits (237), Expect = 6e-019
Identities = 54/111 (48%), Positives = 72/111 (64%), Gaps = 3/111 (2%)
Frame = +3
Query: 681 TMPNADQPFRLNWASFSTGEKRASENGGPDLSVFVGDLAPDVTDAVLLETF-AGYQSVKG 857
T P + FRLNWAS +T ++S P+ S+FVGDL+P T+A LL F ++SVK
Sbjct: 164 TNPTFKRTFRLNWASGAT--LQSSIPSTPEFSLFVGDLSPTATEADLLSLFQTRFKSVKT 221
Query: 858 AKVVIDSNTGRSKGYGFVRFGDESERSRALTEMNGAFCLSRQMRVGIATPK 1010
+V+ D TG S+ +GFVRFGDE ER RAL EM+G + R +RV ATP+
Sbjct: 222 VRVMTDPLTGSSRCFGFVRFGDEDERRRALIEMSGKWFQGRALRVAYATPR 272
Score = 79 bits (193), Expect = 8e-014
Identities = 36/76 (47%), Positives = 50/76 (65%)
Frame = +3
Query: 1098 ESNNSTIFVGGIDADVTEEDLRQPFSQFGEVVSVKIPVGKGCGFVQFGNRQSAEEAIGNL 1277
+ N+T+FVGG+ TE LR F FG +++V+IP GK CGFV+F R AE +I L
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
Query: 1278 NGTVIGKNTVRLSWGR 1325
G ++G + +RLSWGR
Sbjct: 416 QGFIVGGSPIRLSWGR 431
>sp|Q9ZUU4|ROC1_ARATH Ribonucleoprotein At2g37220, chloroplastic OS=Arabidopsis
thaliana GN=At2g37220 PE=1 SV=1
Length = 289
Score = 93 bits (229), Expect = 5e-018
Identities = 65/202 (32%), Positives = 98/202 (48%), Gaps = 12/202 (5%)
Frame = +3
Query: 768 DLSVFVGDLAPDVTDAVLLETFAGYQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSRAL 947
DL +FVG+L +V A L + F +V+ +V+ D TGRS+G+GFV SE A
Sbjct: 90 DLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAA 149
Query: 948 TEMNGAFCLSRQMRV--GIATPKRAAAYGQQNGSQALTLAGGHGGNGSVSDGESNNSTIF 1121
+ NG R +RV G PKR + + S + G+GG G G N ++
Sbjct: 150 QQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNR--VY 207
Query: 1122 VGGIDADVTEEDLRQPFSQFGEVVSVKIPV------GKGCGFVQFGNRQSAEEAIGNLNG 1283
VG + V + L FS+ G+VV ++ KG GFV + + Q + AI +L+G
Sbjct: 208 VGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDG 267
Query: 1284 TVIGKNTVRLS--WGRSPNRQW 1343
+ +R+S R P RQ+
Sbjct: 268 ADLDGRQIRVSEAEARPPRRQY 289
>sp|Q00539|NAM8_YEAST Protein NAM8 OS=Saccharomyces cerevisiae GN=NAM8 PE=1
SV=2
Length = 523
Score = 91 bits (223), Expect = 3e-017
Identities = 43/77 (55%), Positives = 56/77 (72%)
Frame = +3
Query: 1098 ESNNSTIFVGGIDADVTEEDLRQPFSQFGEVVSVKIPVGKGCGFVQFGNRQSAEEAIGNL 1277
+ NN+T+F+GG+ + VTE++LR F FG +V VKIPVGK CGFVQ+ +R SAE AI +
Sbjct: 309 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCCGFVQYVDRLSAEAAIAGM 368
Query: 1278 NGTVIGKNTVRLSWGRS 1328
G I + VRLSWGRS
Sbjct: 369 QGFPIANSRVRLSWGRS 385
>sp|Q86U06|RBM23_HUMAN Probable RNA-binding protein 23 OS=Homo sapiens GN=RBM23
PE=1 SV=1
Length = 439
Score = 77 bits (188), Expect = 3e-013
Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 18/218 (8%)
Frame = +3
Query: 381 YSQGHYQHPPQFHYAP---PYHQQNHQQRGGSGGGDDVKTLWVGDLLHWMDETYLHTCFS 551
Y GH + P +P P + ++R D +T++ L + L FS
Sbjct: 135 YRYGHSKSPHFREKSPVREPVDNLSPEER-------DARTVFCMQLAARIRPRDLEDFFS 187
Query: 552 HTNEVSSVKVIRNKQTNQSEGYGFVEFLSRSAAEEVL----QSYSGV-TMPNADQPFRLN 716
+V V++I ++ + +S+G +VEF + + Q GV + A Q +
Sbjct: 188 AVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNR 247
Query: 717 WASFSTGEKRASENGGPDLSVFVGDLAPDVTDAVLLETFAGYQSVKGAKVVIDSNTGRSK 896
A+ + ++ NGGP + ++VG L ++T+ +L F + + ++ DS+TGRSK
Sbjct: 248 LAAMANNLQKG--NGGP-MRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSK 304
Query: 897 GYGFVRFGDESERSRALTEMNGAFCLSRQMRVGIATPK 1010
GYGF+ F D RAL ++NG R MRVG T +
Sbjct: 305 GYGFITFSDSECARRALEQLNGFELAGRPMRVGHVTER 342
>sp|Q14498|RBM39_HUMAN RNA-binding protein 39 OS=Homo sapiens GN=RBM39 PE=1
SV=2
Length = 530
Score = 76 bits (186), Expect = 5e-013
Identities = 53/186 (28%), Positives = 96/186 (51%), Gaps = 8/186 (4%)
Frame = +3
Query: 480 DVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTNQSEGYGFVEFLSRSAAEEV 659
D +T++ L + L FS +V V++I ++ + +S+G +VEF+ S+
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 210
Query: 660 L----QSYSGV-TMPNADQPFRLNWASFSTGEKRASENGGPDLSVFVGDLAPDVTDAVLL 824
+ Q GV + A Q + A+ + ++ S GP + ++VG L ++T+ +L
Sbjct: 211 IGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGS--AGP-MRLYVGSLHFNITEDMLR 267
Query: 825 ETFAGYQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSRALTEMNGAFCLSRQMRVGIAT 1004
F + ++ ++++DS TGRSKGYGF+ F D +AL ++NG R M+VG T
Sbjct: 268 GIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVT 327
Query: 1005 PKRAAA 1022
+ A+
Sbjct: 328 ERTDAS 333
>sp|Q8VH51|RBM39_MOUSE RNA-binding protein 39 OS=Mus musculus GN=Rbm39 PE=1
SV=1
Length = 530
Score = 76 bits (186), Expect = 5e-013
Identities = 53/186 (28%), Positives = 95/186 (51%), Gaps = 8/186 (4%)
Frame = +3
Query: 480 DVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTNQSEGYGFVEFLSRSAAEEV 659
D +T++ L + L FS +V V++I ++ + +S G +VEF+ S+
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSRGIAYVEFVDVSSVRLA 210
Query: 660 L----QSYSGV-TMPNADQPFRLNWASFSTGEKRASENGGPDLSVFVGDLAPDVTDAVLL 824
+ Q GV + A Q + A+ + ++ S GP + ++VG L ++T+ +L
Sbjct: 211 IGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGS--AGP-MRLYVGSLHFNITEDMLR 267
Query: 825 ETFAGYQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSRALTEMNGAFCLSRQMRVGIAT 1004
F + ++ ++++DS TGRSKGYGF+ F D +AL ++NG R M+VG T
Sbjct: 268 GIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVT 327
Query: 1005 PKRAAA 1022
+ A+
Sbjct: 328 ERTDAS 333
>sp|Q5RC80|RBM39_PONAB RNA-binding protein 39 OS=Pongo abelii GN=RBM39 PE=2
SV=1
Length = 524
Score = 76 bits (186), Expect = 5e-013
Identities = 53/186 (28%), Positives = 96/186 (51%), Gaps = 8/186 (4%)
Frame = +3
Query: 480 DVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTNQSEGYGFVEFLSRSAAEEV 659
D +T++ L + L FS +V V++I ++ + +S+G +VEF+ S+
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 210
Query: 660 L----QSYSGV-TMPNADQPFRLNWASFSTGEKRASENGGPDLSVFVGDLAPDVTDAVLL 824
+ Q GV + A Q + A+ + ++ S GP + ++VG L ++T+ +L
Sbjct: 211 IGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGS--AGP-MRLYVGSLHFNITEDMLR 267
Query: 825 ETFAGYQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSRALTEMNGAFCLSRQMRVGIAT 1004
F + ++ ++++DS TGRSKGYGF+ F D +AL ++NG R M+VG T
Sbjct: 268 GIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVT 327
Query: 1005 PKRAAA 1022
+ A+
Sbjct: 328 ERTDAS 333
>sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitochondrial
OS=Arabidopsis thaliana GN=GRP2 PE=1 SV=1
Length = 158
Score = 75 bits (182), Expect = 1e-012
Identities = 46/122 (37%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
Frame = +3
Query: 777 VFVGDLAPDVTDAVLLETFAGYQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSRALTEM 956
+F+G L+ DA L + FA + V AKV++D TGRS+G+GFV F DE + A++EM
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96
Query: 957 NGAFCLSRQMRVGIAT--PKRAAAYGQQNGSQALTLAGGHGGNGSVSDGESNNSTIFVGG 1130
+G R +RV A P AYG G +GG GG G G + GG
Sbjct: 97 DGKELNGRHIRVNPANDRPSAPRAYGGGGG-----YSGGGGGYGGGGGGYGGGGGGYGGG 151
Query: 1131 ID 1136
D
Sbjct: 152 GD 153
>sp|Q6DRG1|RBM42_DANRE RNA-binding protein 42 OS=Danio rerio GN=rbm42 PE=2 SV=2
Length = 402
Score = 70 bits (169), Expect = 5e-011
Identities = 34/75 (45%), Positives = 47/75 (62%)
Frame = +3
Query: 768 DLSVFVGDLAPDVTDAVLLETFAGYQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSRAL 947
D +F GDL +V D +L F+ Y S AKVV D TG++KGYGFV F D ++ RA+
Sbjct: 302 DFRIFCGDLGNEVNDDILARAFSRYPSFLKAKVVRDKRTGKTKGYGFVSFKDPNDYVRAM 361
Query: 948 TEMNGAFCLSRQMRV 992
EMNG + SR +++
Sbjct: 362 REMNGRYVGSRPIKL 376
>sp|Q66KL9|RBM42_XENTR RNA-binding protein 42 OS=Xenopus tropicalis GN=rbm42
PE=2 SV=1
Length = 392
Score = 69 bits (168), Expect = 6e-011
Identities = 33/75 (44%), Positives = 47/75 (62%)
Frame = +3
Query: 768 DLSVFVGDLAPDVTDAVLLETFAGYQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSRAL 947
D +F GDL +V D +L F+ Y S AKV+ D TG++KGYGFV F D ++ RA+
Sbjct: 292 DFRIFCGDLGNEVNDDILARAFSRYPSFLRAKVIRDKRTGKTKGYGFVSFKDPNDYVRAM 351
Query: 948 TEMNGAFCLSRQMRV 992
EMNG + SR +++
Sbjct: 352 REMNGKYVGSRPIKL 366
>sp|Q0P5L0|RBM42_BOVIN RNA-binding protein 42 OS=Bos taurus GN=RBM42 PE=2 SV=1
Length = 448
Score = 69 bits (167), Expect = 8e-011
Identities = 33/75 (44%), Positives = 47/75 (62%)
Frame = +3
Query: 768 DLSVFVGDLAPDVTDAVLLETFAGYQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSRAL 947
D +F GDL +V D +L F+ + S AKV+ D TG++KGYGFV F D S+ RA+
Sbjct: 348 DFRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAM 407
Query: 948 TEMNGAFCLSRQMRV 992
EMNG + SR +++
Sbjct: 408 REMNGKYVGSRPIKL 422
>sp|Q9BTD8|RBM42_HUMAN RNA-binding protein 42 OS=Homo sapiens GN=RBM42 PE=1
SV=1
Length = 480
Score = 69 bits (167), Expect = 8e-011
Identities = 33/75 (44%), Positives = 47/75 (62%)
Frame = +3
Query: 768 DLSVFVGDLAPDVTDAVLLETFAGYQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSRAL 947
D +F GDL +V D +L F+ + S AKV+ D TG++KGYGFV F D S+ RA+
Sbjct: 380 DFRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAM 439
Query: 948 TEMNGAFCLSRQMRV 992
EMNG + SR +++
Sbjct: 440 REMNGKYVGSRPIKL 454
>sp|Q91V81|RBM42_MOUSE RNA-binding protein 42 OS=Mus musculus GN=Rbm42 PE=1
SV=1
Length = 474
Score = 69 bits (167), Expect = 8e-011
Identities = 33/75 (44%), Positives = 47/75 (62%)
Frame = +3
Query: 768 DLSVFVGDLAPDVTDAVLLETFAGYQSVKGAKVVIDSNTGRSKGYGFVRFGDESERSRAL 947
D +F GDL +V D +L F+ + S AKV+ D TG++KGYGFV F D S+ RA+
Sbjct: 374 DFRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAM 433
Query: 948 TEMNGAFCLSRQMRV 992
EMNG + SR +++
Sbjct: 434 REMNGKYVGSRPIKL 448
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,803,502,693
Number of Sequences: 518415
Number of Extensions: 29803502693
Number of Successful Extensions: 223310478
Number of sequences better than 0.0: 0
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