BLASTX 7.6.2
Query= UN07509 /QuerySize=1742
(1741 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||ATMG00560.1 | Symbols: RPL2 | encodes a mitochond... 666 1e-191
TAIR9_protein||AT2G07715.1 | Symbols: | ribosomal protein L2, p... 575 4e-164
TAIR9_protein||ATMG00570.1 | Symbols: ORFX | encodes a protein o... 122 8e-028
TAIR9_protein||ATCG00830.1 | Symbols: RPL2.1 | encodes a chlorop... 57 3e-008
TAIR9_protein||ATCG01310.1 | Symbols: RPL2.2 | encodes a chlorop... 57 3e-008
>TAIR9_protein||ATMG00560.1 | Symbols: RPL2 | encodes a mitochondrial ribosomal
protein L2, a constituent of the large subunit of the ribosomal complex
| chrM:154744-157345 FORWARD
Length = 350
Score = 666 bits (1718), Expect = 1e-191
Identities = 335/350 (95%), Positives = 340/350 (97%)
Frame = +1
Query: 187 MRPGRARALSQFTLSTGKSAGRNSSGRITVFHRGGGSKRLLRRIDLKRSTSSMGIVESIE 366
MRPGRARAL QFTLSTGKSAGRNSSGRITVFHRGGGSKRLLRRIDLKRSTSSMGIVESIE
Sbjct: 1 MRPGRARALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLLRRIDLKRSTSSMGIVESIE 60
Query: 367 YDPNRSSQIAPVRWIKGGCQKKMNTIEELAPPRKILEPTTNTISGLFSFSFLPGKVDQRK 546
YDPNRSSQIAPVRWIKGGCQKKMNTIE+ APPRKILEPTTNTISGLFSFSFLPGKVD+RK
Sbjct: 61 YDPNRSSQIAPVRWIKGGCQKKMNTIEKFAPPRKILEPTTNTISGLFSFSFLPGKVDKRK 120
Query: 547 VACFSPGLMAAYVVVGLPTGMPPLSSYKSAFASKDAGSTKTLVKDVFFSAFSSPKAKRET 726
VACFSPGLMAAYVVVGLPTGMPPLSS KSAFASK AGSTKTLVKDVFFSAFSSPKAKRET
Sbjct: 121 VACFSPGLMAAYVVVGLPTGMPPLSSSKSAFASKGAGSTKTLVKDVFFSAFSSPKAKRET 180
Query: 727 ASLAFASSFGFPRIAVAGVPTAFFAPRMRQKVRGKSTFSLCEVRKWRTHSILWAHRIKGK 906
ASLAFASSFGFPRIAVAG AFFAPRMRQKVRGKSTFSLCEV+K RTHSILWAHRIKGK
Sbjct: 181 ASLAFASSFGFPRIAVAGAKPAFFAPRMRQKVRGKSTFSLCEVQKGRTHSILWAHRIKGK 240
Query: 907 AGLSWQSFRRQDTLGLVGAAGHNKSKPKTDQGSLPAKPIGERAKQLKALRGLRAKDGACK 1086
AGLSWQSFRRQDTLGLVGAAGH KSKPKTDQG+LPAKPIGERAKQLKALRGLRAKDGACK
Sbjct: 241 AGLSWQSFRRQDTLGLVGAAGHKKSKPKTDQGNLPAKPIGERAKQLKALRGLRAKDGACK 300
Query: 1087 VDRAPVTYIIASHQLEAGKMVVNCDWSKPSTSSFLQSAQNDHPKPLFTV* 1236
VDRAPVTYIIASHQLEAGKMV+NCDWSKPSTSSFLQSAQNDHPKPLFTV*
Sbjct: 301 VDRAPVTYIIASHQLEAGKMVMNCDWSKPSTSSFLQSAQNDHPKPLFTV* 350
>TAIR9_protein||AT2G07715.1 | Symbols: | ribosomal protein L2, putative |
chr2:3411180-3412103 FORWARD
Length = 308
Score = 575 bits (1481), Expect = 4e-164
Identities = 292/306 (95%), Positives = 296/306 (96%)
Frame = +1
Query: 187 MRPGRARALSQFTLSTGKSAGRNSSGRITVFHRGGGSKRLLRRIDLKRSTSSMGIVESIE 366
MRPGRARAL QFTLSTGKSAGRNSSGRITVFHRGGGSKRLLRRIDLKRSTSSMGIVESIE
Sbjct: 1 MRPGRARALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLLRRIDLKRSTSSMGIVESIE 60
Query: 367 YDPNRSSQIAPVRWIKGGCQKKMNTIEELAPPRKILEPTTNTISGLFSFSFLPGKVDQRK 546
YDPNRSSQIAPVRWIKGGCQKKMNTIE+ APPRKILEPTTNTISGLFSFSFLPGKVD+RK
Sbjct: 61 YDPNRSSQIAPVRWIKGGCQKKMNTIEKFAPPRKILEPTTNTISGLFSFSFLPGKVDKRK 120
Query: 547 VACFSPGLMAAYVVVGLPTGMPPLSSYKSAFASKDAGSTKTLVKDVFFSAFSSPKAKRET 726
VACFSPGLMAAYVVVGLPTGMPPLSS KSAFASK AGSTKTLVKDVFFSAFSS KAKRET
Sbjct: 121 VACFSPGLMAAYVVVGLPTGMPPLSSSKSAFASKGAGSTKTLVKDVFFSAFSSLKAKRET 180
Query: 727 ASLAFASSFGFPRIAVAGVPTAFFAPRMRQKVRGKSTFSLCEVRKWRTHSILWAHRIKGK 906
ASLAFASSFGFPRIAVAG AFFAPRMRQKVRGKSTFSLCEV+K RTHSILWAHRIKGK
Sbjct: 181 ASLAFASSFGFPRIAVAGAKPAFFAPRMRQKVRGKSTFSLCEVQKGRTHSILWAHRIKGK 240
Query: 907 AGLSWQSFRRQDTLGLVGAAGHNKSKPKTDQGSLPAKPIGERAKQLKALRGLRAKDGACK 1086
AGLSWQSFRRQDTLGLVGAAGH KSKPKTDQG+LPAKPIGERAKQLKALRGLRAKDGACK
Sbjct: 241 AGLSWQSFRRQDTLGLVGAAGHKKSKPKTDQGNLPAKPIGERAKQLKALRGLRAKDGACK 300
Query: 1087 VDRAPV 1104
VDRAPV
Sbjct: 301 VDRAPV 306
>TAIR9_protein||ATMG00570.1 | Symbols: ORFX | encodes a protein of unknown
function. The transcript has extensive RNA editing at the 3' end.
Protein has orthologous in other plants and sequence is similar to E.
coli ORFs orf154 and orf131, both of unknown function. So far, similar
proteins are found only in plants and prokaryotes. | chrM:157491-158351
FORWARD
Length = 287
Score = 122 bits (305), Expect = 8e-028
Identities = 60/68 (88%)
Frame = +3
Query: 1410 YISYEFYFALETILGEVRIRSVWILIGLGLTWFTCYWFSEELIFLLALPFLTLPFDSYFV 1589
YISYEF FA ETILGEVRIRSV ILIGLGLTWFTCYWF EELI LA PFLTLPFDSYFV
Sbjct: 11 YISYEFNFASETILGEVRIRSVRILIGLGLTWFTCYWFPEELISPLASPFLTLPFDSYFV 70
Query: 1590 CTQLTEPF 1613
CTQLTE F
Sbjct: 71 CTQLTEAF 78
Score = 90 bits (222), Expect = 4e-018
Identities = 58/125 (46%), Positives = 72/125 (57%), Gaps = 10/125 (8%)
Frame = +2
Query: 1382 NPLLLALNYLYIL*ILFRIGNDS-----RRSSNPFRLDIDRSWFDMVYVLLVFGRVNIPI 1546
NP LLALNYLYI F +++ R S + + +WF +
Sbjct: 1 NPSLLALNYLYIS-YEFNFASETILGEVRIRSVRILIGLGLTWFTCYWFPEELISPLASP 59
Query: 1547 SVTLSYPAF*LVFCLYTINGAFSTFVATSSIACSYFVFPLISYQIWCLLIPSCYGD-KTK 1723
+TL + ++ F + AFSTFVATSSIACSYFVFPLISYQIWC LIPSCYG+ +TK
Sbjct: 60 FLTLPFDSY---FVCTQLTEAFSTFVATSSIACSYFVFPLISYQIWCFLIPSCYGEQRTK 116
Query: 1724 YIDFL 1738
Y FL
Sbjct: 117 YNRFL 121
>TAIR9_protein||ATCG00830.1 | Symbols: RPL2.1 | encodes a chloroplast ribosomal
protein L2, a constituent of the large subunit of the ribosomal complex
| chrC:84337-85843 REVERSE
Length = 275
Score = 57 bits (136), Expect = 3e-008
Identities = 28/58 (48%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +1
Query: 247 GRNSSGRITVFHRGGGSKRLLRRIDLKRSTSSM-GIVESIEYDPNRSSQIAPVRWIKG 417
GRN+ G IT HRGGG KRL R+ID +R+ + G + +IEYDPNR++ I + + G
Sbjct: 40 GRNARGIITARHRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDG 97
>TAIR9_protein||ATCG01310.1 | Symbols: RPL2.2 | encodes a chloroplast ribosomal
protein L2, a constituent of the large subunit of the ribosomal complex
| chrC:152806-154312 FORWARD
Length = 275
Score = 57 bits (136), Expect = 3e-008
Identities = 28/58 (48%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +1
Query: 247 GRNSSGRITVFHRGGGSKRLLRRIDLKRSTSSM-GIVESIEYDPNRSSQIAPVRWIKG 417
GRN+ G IT HRGGG KRL R+ID +R+ + G + +IEYDPNR++ I + + G
Sbjct: 40 GRNARGIITARHRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDG 97
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,441,829,320
Number of Sequences: 33410
Number of Extensions: 4441829320
Number of Successful Extensions: 168417030
Number of sequences better than 0.0: 0
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