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TAIR blast output of UN07688


BLASTX 7.6.2

Query= UN07688 /QuerySize=1176
        (1175 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT1G54380.1 | Symbols:  | spliceosome protein-rel...    436   2e-122
TAIR9_protein||AT2G42510.2 | Symbols:  | FUNCTIONS IN: molecular...    147   2e-035
TAIR9_protein||AT2G42510.1 | Symbols:  | FUNCTIONS IN: molecular...    137   2e-032

>TAIR9_protein||AT1G54380.1 | Symbols:  | spliceosome protein-related |
        chr1:20298287-20300899 REVERSE

          Length = 516

 Score =  436 bits (1120), Expect = 2e-122
 Identities = 231/357 (64%), Positives = 281/357 (78%), Gaps = 14/357 (3%)
 Frame = +3

Query:   12 GTAHGDDKEAPRKHKKTGVKHQHVEASG----GK---IMYSLNQIKSMRYANMANQRKLW 170
            GTA  ++K+ PRK KK G K   +E SG    GK    +Y+  Q++SMR+A++ NQ+ LW
Sbjct:  161 GTAQ-NEKDTPRKLKKIGDKRNVIEGSGVENNGKQFRRLYTRKQLESMRFAHIVNQKNLW 219

Query:  171 SDVYAMLLPELVSEYEGLVSLKKSQKTSKSSGIGILGTKEGMDDLTLEEEEEEEEEYSED 350
            S++Y+ +LPE+V+EYE LV + K+ K+SKS+ +         ++L  EE  E+ E+Y++D
Sbjct:  220 SEMYSRILPEVVTEYESLVYV-KNYKSSKSNRVRGRTESGNEENLGTEEGTEDPEDYTDD 278

Query:  351 NDDYNSILKPAFEVEGEPDFESGPPEDGFEYLRRVRWEAKRVPNVKVAKIDESKYITKEQ 530
            NDDYNSIL+PAFEV+GEPDF +GPPEDG EYLRRVRWEAK +PNV+VAKIDES YI KEQ
Sbjct:  279 NDDYNSILRPAFEVDGEPDFSTGPPEDGLEYLRRVRWEAKGIPNVRVAKIDESTYIKKEQ 338

Query:  531 SVYMPQIPEIPKCPEHLLPLKEWEDSLLSDFSHLRLALSQTDNNFFGDEIMSSSPSTEYM 710
            SVYMP IPEIPKCPE+LLP+KEWEDSLL DF HLR  L+Q+ N+   DEI+SS    E +
Sbjct:  339 SVYMPLIPEIPKCPEYLLPMKEWEDSLLLDFVHLRQTLTQSANS-CEDEIISSQ-CVEDL 396

Query:  711 LMGMFSTRLNTVTDESFGVVVSEIQGMDSVTRVSRLKKRICLVEKESGLQGSDCIWVVAL 890
            L+ MF+  L+T  DESFG VV++IQGMDSVTRVS+LKKRICLVEKESGLQ SDC WVVAL
Sbjct:  397 LVEMFNKHLHTEEDESFGEVVTDIQGMDSVTRVSKLKKRICLVEKESGLQSSDCKWVVAL 456

Query:  891 CASVDTPLDGDTCACLRALLRKCASVRA---LEVEDEQVIIMANMLITIAGRYFGQM 1052
            CAS++TPLD DTCACLR LLRKCASVRA   LEV DE+VI MANMLITIAGRYFGQM
Sbjct:  457 CASLETPLDADTCACLRGLLRKCASVRAETSLEVGDEEVITMANMLITIAGRYFGQM 513

>TAIR9_protein||AT2G42510.2 | Symbols:  | FUNCTIONS IN: molecular_function
        unknown; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via
        spliceosome; LOCATED IN: cellular_component unknown; CONTAINS InterPro
        DOMAIN/s: Survival motor neuron interacting protein 1
        (InterPro:IPR007022); BEST Arabidopsis thaliana protein match is:
        spliceosome protein-related (TAIR:AT1G54380.1). |
        chr2:17701686-17704618 FORWARD

          Length = 654

 Score =  147 bits (369), Expect = 2e-035
 Identities = 90/192 (46%), Positives = 118/192 (61%), Gaps = 8/192 (4%)
 Frame = +3

Query:  15 TAHGDDKEAPRKHKKTGVKHQHVEASGGKIM--YSLNQIKSMRYANMANQRKLWSDVYAM 188
           TAH  DK+APRKHKK GV+    + +   I+   +  ++   R +   N ++L   +Y+ 
Sbjct: 328 TAH-TDKDAPRKHKKVGVEKPIDKGNASSIVERNASTKVSDFRNSGEMNGKQL-RIMYSR 385

Query: 189 LLPELVSEYEGLVSLKKSQKTSKSSGIGILGTK-EGMDDLTLEEEEE--EEEEYSEDNDD 359
              E +  Y  + + KK      +  +  L T+ EG         ++   +EE +EDNDD
Sbjct: 386 NQMESM-RYAHIANQKKLWSDLYARLLPELVTEYEGPISAVPRRTQDYVVKEEKTEDNDD 444

Query: 360 YNSILKPAFEVEGEPDFESGPPEDGFEYLRRVRWEAKRVPNVKVAKIDESKYITKEQSVY 539
           YNSIL+PAF V+GEPDF+SGPPEDG EYLRRVRWEAKR+PNVKVAK+  SKY  KEQSVY
Sbjct: 445 YNSILRPAFAVDGEPDFDSGPPEDGIEYLRRVRWEAKRIPNVKVAKVSGSKYREKEQSVY 504

Query: 540 MPQIPEIPKCPE 575
           MPQIP  P   E
Sbjct: 505 MPQIPRAPATGE 516


 Score =  84 bits (207), Expect = 1e-016
 Identities = 40/48 (83%), Positives = 43/48 (89%)
 Frame = +3

Query: 840 EKESGLQGSDCIWVVALCASVDTPLDGDTCACLRALLRKCASVRALEV 983
           EKESGL+ SDC WVVALCASVDTP D DT ACLRAL+RKCAS+RALEV
Sbjct: 570 EKESGLESSDCKWVVALCASVDTPPDADTSACLRALVRKCASLRALEV 617


 Score =  53 bits (125), Expect = 4e-007
 Identities = 24/33 (72%), Positives = 28/33 (84%)
 Frame = +1

Query:  982 LKMNKSSSWQICSSPSQADILAKWNKRC*IVTS 1080
            L+MNK S WQICSSPSQADILAKWN+R  + T+
Sbjct:  620 LEMNKLSLWQICSSPSQADILAKWNERRSVFTT 652

>TAIR9_protein||AT2G42510.1 | Symbols:  | FUNCTIONS IN: molecular_function
        unknown; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via
        spliceosome; LOCATED IN: cellular_component unknown; CONTAINS InterPro
        DOMAIN/s: Survival motor neuron interacting protein 1
        (InterPro:IPR007022); BEST Arabidopsis thaliana protein match is:
        spliceosome protein-related (TAIR:AT1G54380.1); Has 294 Blast hits to
        263 proteins in 60 species: Archae - 2; Bacteria - 35; Metazoa - 52;
        Fungi - 12; Plants - 28; Viruses - 0; Other Eukaryotes - 165 (source:
        NCBI BLink). | chr2:17701686-17704255 FORWARD

          Length = 533

 Score =  137 bits (343), Expect = 2e-032
 Identities = 64/87 (73%), Positives = 72/87 (82%)
 Frame = +3

Query: 315 EEEEEEEEYSEDNDDYNSILKPAFEVEGEPDFESGPPEDGFEYLRRVRWEAKRVPNVKVA 494
           E+   +EE +EDNDDYNSIL+PAF V+GEPDF+SGPPEDG EYLRRVRWEAKR+PNVKVA
Sbjct: 412 EDYVVKEEKTEDNDDYNSILRPAFAVDGEPDFDSGPPEDGIEYLRRVRWEAKRIPNVKVA 471

Query: 495 KIDESKYITKEQSVYMPQIPEIPKCPE 575
           K+  SKY  KEQSVYMPQIP  P   E
Sbjct: 472 KVSGSKYREKEQSVYMPQIPRAPATGE 498

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,536,870,326
Number of Sequences: 33410
Number of Extensions: 4536870326
Number of Successful Extensions: 173836284
Number of sequences better than 0.0: 0