BLASTX 7.6.2
Query= UN07786 /QuerySize=789
(788 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G03280.1 | Symbols: | transcription initiatio... 345 3e-095
TAIR9_protein||AT4G20340.1 | Symbols: | RNA polymerase II trans... 309 2e-084
TAIR9_protein||AT4G20810.1 | Symbols: | transcription initiatio... 115 4e-026
>TAIR9_protein||AT1G03280.1 | Symbols: | transcription initiation factor IIE
(TFIIE) alpha subunit family protein / general transcription factor
TFIIE family protein | chr1:803635-806758 FORWARD
Length = 480
Score = 345 bits (883), Expect = 3e-095
Identities = 166/194 (85%), Positives = 180/194 (92%)
Frame = +1
Query: 166 MDNKGPVQKTVVLEPFIKLVRLLARAFYDDYTTKSDNQQKTARSDNRGIAVVVLDELTRK 345
M+ GPVQK VVL+PF+KLVRL+ARAFYDDYTTKSDNQQK+ARSDNRGIA VVLD L R+
Sbjct: 1 MEKSGPVQKAVVLQPFVKLVRLVARAFYDDYTTKSDNQQKSARSDNRGIAAVVLDALARR 60
Query: 346 QWVREEDLAKELKLHAKQLRKIIRHFEEQNLIMRDHRKETAKGAKMYSVAVAATTGGRAE 525
QWVREEDLAK+L+LHAKQLRKIIR FEE+ LIMRDHRKETAKGAKMYS AVAATT GRAE
Sbjct: 61 QWVREEDLAKDLQLHAKQLRKIIRLFEEEKLIMRDHRKETAKGAKMYSAAVAATTDGRAE 120
Query: 526 DKVKFHTHSYCCLNYPQIYDVVRYKLHRMKKKLKDELEDKNTVQEYGCPNCQRKYNALDA 705
DKVK HTHSYCCL+Y QI DVVR++LHRMKK+LKDELEDKNTVQEYGCPNCQRKYNALDA
Sbjct: 121 DKVKLHTHSYCCLDYAQICDVVRFRLHRMKKRLKDELEDKNTVQEYGCPNCQRKYNALDA 180
Query: 706 LRLISMEDDAFHCE 747
LRLISM DD+FHCE
Sbjct: 181 LRLISMVDDSFHCE 194
>TAIR9_protein||AT4G20340.1 | Symbols: | RNA polymerase II transcription
factor/ transcription initiation factor | chr4:10985011-10987748
FORWARD
Length = 476
Score = 309 bits (789), Expect = 2e-084
Identities = 147/188 (78%), Positives = 168/188 (89%), Gaps = 1/188 (0%)
Frame = +1
Query: 184 VQKTVVLEPFIKLVRLLARAFYDDYTTKSDNQQKTARSDNRGIAVVVLDELTRKQWVREE 363
V+KTVVLEPF+KLVRLL R FYD+YT +SDNQQK+ + + +G AV+VLD LTR+QWVREE
Sbjct: 8 VRKTVVLEPFVKLVRLLVRIFYDNYTPESDNQQKSVK-NVKGSAVIVLDALTRRQWVREE 66
Query: 364 DLAKELKLHAKQLRKIIRHFEEQNLIMRDHRKETAKGAKMYSVAVAATTGGRAEDKVKFH 543
DLAKE+K +AK+LRK+IRHFEEQ +MR HRKETAK AKMYS AV TT GRAED VKFH
Sbjct: 67 DLAKEVKRNAKELRKLIRHFEEQKFVMRYHRKETAKRAKMYSYAVGGTTDGRAEDNVKFH 126
Query: 544 THSYCCLNYPQIYDVVRYKLHRMKKKLKDELEDKNTVQEYGCPNCQRKYNALDALRLISM 723
THSYCCL+Y QIYD+VRYKLHR+KKK KDELED+NTVQEYGCPNC+RKYNALDALRLISM
Sbjct: 127 THSYCCLDYAQIYDIVRYKLHRLKKKFKDELEDRNTVQEYGCPNCKRKYNALDALRLISM 186
Query: 724 EDDAFHCE 747
EDD+FHCE
Sbjct: 187 EDDSFHCE 194
>TAIR9_protein||AT4G20810.1 | Symbols: | transcription initiation factor IIE
(TFIIE) alpha subunit family protein / general transcription factor
TFIIE family protein | chr4:11141427-11143597 REVERSE
Length = 417
Score = 115 bits (287), Expect = 4e-026
Identities = 54/81 (66%), Positives = 71/81 (87%)
Frame = +1
Query: 220 LVRLLARAFYDDYTTKSDNQQKTARSDNRGIAVVVLDELTRKQWVREEDLAKELKLHAKQ 399
+V+L+A+ FYD+YT K++NQ+K+A++ + GIAV+VLD LTR+QWVREEDLAKELKL+ KQ
Sbjct: 1 MVKLVAKTFYDNYTPKNNNQKKSAKNGSGGIAVLVLDALTRRQWVREEDLAKELKLNTKQ 60
Query: 400 LRKIIRHFEEQNLIMRDHRKE 462
LR I+R+FEEQ IMR HRKE
Sbjct: 61 LRTILRYFEEQQFIMRVHRKE 81
Score = 111 bits (277), Expect = 5e-025
Identities = 48/63 (76%), Positives = 55/63 (87%)
Frame = +1
Query: 499 AATTGGRAEDKVKFHTHSYCCLNYPQIYDVVRYKLHRMKKKLKDELEDKNTVQEYGCPNC 678
+ATT GR EDKVK H +SYCCL+Y QIYDV+RYKLHRMKK+ KD LEDK+ VQEYGCPNC
Sbjct: 84 SATTNGRGEDKVKVHMYSYCCLDYSQIYDVIRYKLHRMKKEFKDVLEDKDNVQEYGCPNC 143
Query: 679 QRK 687
+RK
Sbjct: 144 KRK 146
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,581,880,257
Number of Sequences: 33410
Number of Extensions: 4581880257
Number of Successful Extensions: 173923095
Number of sequences better than 0.0: 0
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