BLASTX 7.6.2
Query= UN07908 /QuerySize=618
(617 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G10525.1 | Symbols: | FUNCTIONS IN: molecular... 191 3e-049
TAIR9_protein||AT5G04470.1 | Symbols: SIM | SIM (SIAMESE); cycli... 102 2e-022
>TAIR9_protein||AT3G10525.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: SIM (SIAMESE); cyclin-dependent protein kinase inhibitor
(TAIR:AT5G04470.1); Has 23 Blast hits to 23 proteins in 6 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink). | chr3:3281576-3281962
REVERSE
Length = 129
Score = 191 bits (484), Expect = 3e-049
Identities = 92/122 (75%), Positives = 104/122 (85%), Gaps = 1/122 (0%)
Frame = +2
Query: 68 DLEQFNIPSTIKIRSKTSRNNND-GDDEHDGFSCSTPTSQEHKIPSVLDSPPPPPRKPRT 244
DL +FN P+ IKIRSKTS+ D GDD+ D CSTPTSQEHKIP+V+DSPPPPPRKPR
Sbjct: 8 DLSKFNFPTPIKIRSKTSKTKKDEGDDDEDDLRCSTPTSQEHKIPAVVDSPPPPPRKPRP 67
Query: 245 LPSKPSATAAMMTRSCKRKLLVSTCEIIMNREEIDRFFTSVYSDTSTTAKRRRRYPHTAR 424
PS PSATAA+M RSCKRKLLVSTCEIIMNREEIDRFF+SVY++TSTTAKRRR YP+ +R
Sbjct: 68 PPSAPSATAALMIRSCKRKLLVSTCEIIMNREEIDRFFSSVYNETSTTAKRRRSYPYCSR 127
Query: 425 R* 430
R*
Sbjct: 128 R* 129
>TAIR9_protein||AT5G04470.1 | Symbols: SIM | SIM (SIAMESE); cyclin-dependent
protein kinase inhibitor | chr5:1266893-1267276 REVERSE
Length = 128
Score = 102 bits (254), Expect = 2e-022
Identities = 60/132 (45%), Positives = 82/132 (62%), Gaps = 22/132 (16%)
Frame = +2
Query: 68 DLEQFNIPSTIKIRSKTSRNNNDGDDEHDGFSCSTPTSQEHKI-PSVLDSPPPPPRKPRT 244
DL N P IKIR+ T+R++ DG C+TPTS +HKI P+ +PPPPP+KPR
Sbjct: 8 DLPILNFPPAIKIRANTNRDD-------DGGGCTTPTSSDHKIPPTTATTPPPPPQKPR- 59
Query: 245 LPSKPSATAAMMTRSCKRKLL--VSTCEIIMNREEIDRFFTSVYSDTS--------TTAK 394
PS +++ RSCKRKL+ +S EII+N++EI+RFF+SVY+ T T AK
Sbjct: 60 ---PPSTPSSLGIRSCKRKLMTSLSKYEIIVNKDEIERFFSSVYNQTMASSTTTAITVAK 116
Query: 395 RRRRYPHTARR* 430
RRR + +RR*
Sbjct: 117 RRRSFRSCSRR* 128
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,626,902,262
Number of Sequences: 33410
Number of Extensions: 4626902262
Number of Successful Extensions: 173967028
Number of sequences better than 0.0: 0
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