BLASTX 7.6.2
Query= UN08058 /QuerySize=993
(992 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G32440.1 | Symbols: | LOCATED IN: chloroplast... 140 2e-033
TAIR9_protein||AT5G32440.2 | Symbols: | LOCATED IN: chloroplast... 140 2e-033
TAIR9_protein||AT1G80040.1 | Symbols: | unknown protein | chr1:... 64 2e-010
TAIR9_protein||AT5G02510.1 | Symbols: | unknown protein | chr5:... 59 6e-009
>TAIR9_protein||AT5G32440.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G80040.1); Has 303 Blast hits to 289 proteins in 67 species:
Archae - 0; Bacteria - 2; Metazoa - 74; Fungi - 21; Plants - 93;
Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). |
chr5:12077014-12078396 FORWARD
Length = 265
Score = 140 bits (351), Expect = 2e-033
Identities = 87/140 (62%), Positives = 99/140 (70%), Gaps = 28/140 (20%)
Frame = -2
Query: 850 MSAIVCGSKRSLFDDLSSA-PPVSKKLR------SSRF------SSSLLLSHLASIFPDM 710
MSAIVCG KRSLF+DL++A PPVSKKLR SSRF SSSLLL HLA+IFPDM
Sbjct: 1 MSAIVCG-KRSLFEDLAAASPPVSKKLRCFSSSSSSRFSPPIPPSSSLLLDHLAAIFPDM 59
Query: 709 DHQILERAIEECGDDLDSAIISLNQLRLESANKDSEEA--------------KVEVGPSG 572
D QILERAIEECGDDLDSAI LNQLRLESANK+S+ A + G +
Sbjct: 60 DKQILERAIEECGDDLDSAIRCLNQLRLESANKNSDSATNQSPVVIQEPNVEPQQQGSAK 119
Query: 571 KDDQVLNLDGTEWVDLSVRD 512
++ VLNLDGTEWV+L VR+
Sbjct: 120 EEPNVLNLDGTEWVELFVRE 139
Score = 107 bits (267), Expect = 1e-023
Identities = 58/82 (70%), Positives = 67/82 (81%), Gaps = 6/82 (7%)
Frame = -3
Query: 510 MMSASDMNDAKDRASKALEALEKSINARAGSDAAAAAALQSSLQQENLMLRQQLEAAVQE 331
MM+ASDM DAK RA++ALEALEKSINAR G+DA +LQQEN+ML+QQLEA VQE
Sbjct: 140 MMNASDMKDAKARAARALEALEKSINARTGTDA------MQNLQQENMMLKQQLEAIVQE 193
Query: 330 NSLLKRAVVTQQKRQRDGRSES 265
NSLLKRAVVTQQKRQR+ +S
Sbjct: 194 NSLLKRAVVTQQKRQRESEDQS 215
Score = 102 bits (254), Expect = 3e-022
Identities = 51/58 (87%), Positives = 55/58 (94%), Gaps = 1/58 (1%)
Frame = -1
Query: 287 RETEDQSQELQGLRQMVSQYQEQLRTLEVNNYALTLHLKQAQQNNSSIPGRFHPDVF* 114
RE+EDQSQELQ LRQ+V+QYQEQLRTLEVNNYALTLHLKQAQQ NSSIPGR+HPDVF*
Sbjct: 209 RESEDQSQELQHLRQLVTQYQEQLRTLEVNNYALTLHLKQAQQ-NSSIPGRYHPDVF* 265
>TAIR9_protein||AT5G32440.2 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892);
Has 85 Blast hits to 85 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 1; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr5:12077014-12078091 FORWARD
Length = 188
Score = 140 bits (351), Expect = 2e-033
Identities = 87/140 (62%), Positives = 99/140 (70%), Gaps = 28/140 (20%)
Frame = -2
Query: 850 MSAIVCGSKRSLFDDLSSA-PPVSKKLR------SSRF------SSSLLLSHLASIFPDM 710
MSAIVCG KRSLF+DL++A PPVSKKLR SSRF SSSLLL HLA+IFPDM
Sbjct: 1 MSAIVCG-KRSLFEDLAAASPPVSKKLRCFSSSSSSRFSPPIPPSSSLLLDHLAAIFPDM 59
Query: 709 DHQILERAIEECGDDLDSAIISLNQLRLESANKDSEEA--------------KVEVGPSG 572
D QILERAIEECGDDLDSAI LNQLRLESANK+S+ A + G +
Sbjct: 60 DKQILERAIEECGDDLDSAIRCLNQLRLESANKNSDSATNQSPVVIQEPNVEPQQQGSAK 119
Query: 571 KDDQVLNLDGTEWVDLSVRD 512
++ VLNLDGTEWV+L VR+
Sbjct: 120 EEPNVLNLDGTEWVELFVRE 139
Score = 53 bits (126), Expect = 2e-007
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = -3
Query: 510 MMSASDMNDAKDRASKALEALEKSINARAGSDA 412
MM+ASDM DAK RA++ALEALEKSINAR G+DA
Sbjct: 140 MMNASDMKDAKARAARALEALEKSINARTGTDA 172
>TAIR9_protein||AT1G80040.1 | Symbols: | unknown protein |
chr1:30109447-30111051 REVERSE
Length = 249
Score = 64 bits (153), Expect = 2e-010
Identities = 31/54 (57%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Frame = -1
Query: 278 EDQSQELQGLRQMVSQYQEQLRTLEVNNYALTLHLKQAQQNNSSIPGRFHPDVF 117
ED + +L L+Q+V QYQE+LR LEVNNYAL + L+Q + N S+P RF+PDVF
Sbjct: 196 EDANHQLGLLKQLVPQYQEKLRNLEVNNYALRMQLQQVEHGN-SMPARFNPDVF 248
Score = 60 bits (144), Expect = 2e-009
Identities = 31/76 (40%), Positives = 52/76 (68%), Gaps = 6/76 (7%)
Frame = -3
Query: 510 MMSASDMNDAKDRASKALEALEKSINARAGSDAAAAAALQSSLQQENLMLRQQLEAAVQE 331
++ +S +DAK RA++ LEALEK ++ARA +A + Q+E + ++QQ+E V++
Sbjct: 124 VLQSSGTDDAKVRAARVLEALEKMLSARAREEAG------NKFQEEKVAVQQQVETLVKD 177
Query: 330 NSLLKRAVVTQQKRQR 283
N++LKRAV Q +RQ+
Sbjct: 178 NTVLKRAVAIQHERQK 193
>TAIR9_protein||AT5G02510.1 | Symbols: | unknown protein | chr5:560135-560860
FORWARD
Length = 180
Score = 59 bits (140), Expect = 6e-009
Identities = 24/63 (38%), Positives = 44/63 (69%)
Frame = -1
Query: 302 RNRSGRETEDQSQELQGLRQMVSQYQEQLRTLEVNNYALTLHLKQAQQNNSSIPGRFHPD 123
+++ E E++++++ LR +V QYQEQ+ LE++NYA+ LHL+++QQ +S G PD
Sbjct: 118 QHQRSSENEEKAKQVLHLRGVVGQYQEQVHKLELSNYAMKLHLQRSQQQQTSFSGNLPPD 177
Query: 122 VF* 114
++*
Sbjct: 178 IY* 180
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,671,488,970
Number of Sequences: 33410
Number of Extensions: 4671488970
Number of Successful Extensions: 173983077
Number of sequences better than 0.0: 0
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