BLASTX 7.6.2
Query= UN08101 /QuerySize=1627
(1626 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297798226|ref|XP_002866997.1| hypothetical protein ARALYDRAFT... 382 1e-103
gi|222423510|dbj|BAH19725.1| AT4G36690 [Arabidopsis thaliana] 381 3e-103
gi|42573197|ref|NP_974695.1| Splicing factor U2af large subunit ... 379 1e-102
gi|15234495|ref|NP_195387.1| Splicing factor U2af large subunit ... 379 1e-102
gi|30690730|ref|NP_849509.1| Splicing factor U2af large subunit ... 379 1e-102
gi|147840634|emb|CAN68321.1| hypothetical protein VITISV_032193 ... 367 4e-099
gi|225430812|ref|XP_002271463.1| PREDICTED: hypothetical protein... 367 4e-099
gi|156070776|gb|ABU45190.1| unknown [Capsicum frutescens] 363 7e-098
gi|156070797|gb|ABU45209.1| unknown [Solanum bulbocastanum] 361 2e-097
gi|156070760|gb|ABU45175.1| unknown [Solanum melongena] 359 8e-097
gi|188998293|gb|ACD67872.1| U2 snRNP auxiliary factor large subu... 359 8e-097
gi|334187224|ref|NP_001190937.1| Splicing factor U2af large subu... 354 4e-095
gi|156070781|gb|ABU45194.1| unknown [Petunia integrifolia subsp.... 349 8e-094
gi|12323333|gb|AAG51641.1|AC018908_7 putative U2 snRNP auxiliary... 345 2e-092
gi|224134362|ref|XP_002327819.1| predicted protein [Populus tric... 340 5e-091
gi|30696485|ref|NP_176287.3| Splicing factor U2af large subunit ... 334 4e-089
gi|255568277|ref|XP_002525113.1| splicing factor u2af large subu... 332 2e-088
gi|22655131|gb|AAM98156.1| putative U2 snRNP auxiliary factor [A... 331 2e-088
gi|115486373|ref|NP_001068330.1| Os11g0636900 [Oryza sativa Japo... 329 9e-088
gi|218186084|gb|EEC68511.1| hypothetical protein OsI_36782 [Oryz... 329 1e-087
>gi|297798226|ref|XP_002866997.1| hypothetical protein ARALYDRAFT_490965
[Arabidopsis lyrata subsp. lyrata]
Length = 567
Score = 382 bits (979), Expect = 1e-103
Identities = 213/283 (75%), Positives = 233/283 (82%), Gaps = 21/283 (7%)
Frame = +2
Query: 2 RDRDGERIKRHDDREDDRRSRDRDRHHR-SRHRDRSGERRDR----VRGDDDYRRSSRDR 166
RDRDGE+ K +D RDR+RHHR SRHRD S +R +R R DDDYRR SRDR
Sbjct: 75 RDRDGEKGKERSREKD----RDRERHHRSSRHRDHSRDRSERRERGGRDDDDYRR-SRDR 129
Query: 167 DFDRRRDSDRDRGGDRRRRRSRSRGRSERRSRSPSKT-KRVSGFDMAPPAAGMLDAGAAL 343
D DRRRD DRGG RR RRSRSR + +R RSPSK+ KRVSGFDMAPPA+ ML AGAA+
Sbjct: 130 DHDRRRD---DRGG-RRIRRSRSRSK-DRSERSPSKSNKRVSGFDMAPPASAMLAAGAAV 184
Query: 344 TGQVPAPIPNLLPGNG----MFPLQPGQQFGGVPMMPIQAMTQQATRHARRVYVGGLSPS 511
TGQVP P P LPG G MFPL GQ FGG+ MMPIQAMTQQATRHARRVYVGGLSP+
Sbjct: 185 TGQVP-PAPPTLPGAGMFPNMFPLPTGQSFGGLSMMPIQAMTQQATRHARRVYVGGLSPT 243
Query: 512 ANEQSVATFFSQAMAAIGGNSAGPGDAVVNVYINYEKKFAFVEMRSVQEASNAMTLDGII 691
ANEQSVATFFSQ MAA+GGN+AGPGDAVVNVYIN+EKKFAFVEMRSV+EASNAM+LDGII
Sbjct: 244 ANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGII 303
Query: 692 FEGAPVKVRRPSDYNPALAATLGPSQPIPNLNLAAVGLTPGGA 820
FEGAPVKVRRPSDYNP+LAATLGPSQP P+LNLAAVGLTPG +
Sbjct: 304 FEGAPVKVRRPSDYNPSLAATLGPSQPSPHLNLAAVGLTPGAS 346
>gi|222423510|dbj|BAH19725.1| AT4G36690 [Arabidopsis thaliana]
Length = 565
Score = 381 bits (976), Expect = 3e-103
Identities = 213/278 (76%), Positives = 233/278 (83%), Gaps = 18/278 (6%)
Frame = +2
Query: 26 KRHDDREDDRRSRDRDRHHR-SRHRDRS---GERRDR-VRGDDDYRRSSRDRDFDRRRDS 190
++ +R D+ R+RHHR SRHRDRS GERR+R R DDDYRR SRDRD DRRRD
Sbjct: 80 EKSKERSRDKDRDHRERHHRSSRHRDRSRERGERRERGGRDDDDYRR-SRDRDHDRRRD- 137
Query: 191 DRDRGGDR-RRRRSRSRGRSER--RSRSPSKTK-RVSGFDMAPPAAGMLDAGAALTGQVP 358
DRGG R RR RSRS+ RSER RSRSPSK+K RVSGFDMAPPA+ ML AGAA+TGQVP
Sbjct: 138 --DRGGRRSRRSRSRSKDRSERRTRSRSPSKSKQRVSGFDMAPPASAMLAAGAAVTGQVP 195
Query: 359 APIPNLLPGNG----MFPLQPGQQFGGVPMMPIQAMTQQATRHARRVYVGGLSPSANEQS 526
P P LPG G MFPL GQ FGG+ MMPIQAMTQQATRHARRVYVGGLSP+ANEQS
Sbjct: 196 -PAPPTLPGAGMFPNMFPLPTGQSFGGLSMMPIQAMTQQATRHARRVYVGGLSPTANEQS 254
Query: 527 VATFFSQAMAAIGGNSAGPGDAVVNVYINYEKKFAFVEMRSVQEASNAMTLDGIIFEGAP 706
VATFFSQ MAA+GGN+AGPGDAVVNVYIN+EKKFAFVEMRSV+EASNAM+LDGIIFEGAP
Sbjct: 255 VATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAP 314
Query: 707 VKVRRPSDYNPALAATLGPSQPIPNLNLAAVGLTPGGA 820
VKVRRPSDYNP+LAATLGPSQP P+LNLAAVGLTPG +
Sbjct: 315 VKVRRPSDYNPSLAATLGPSQPSPHLNLAAVGLTPGAS 352
>gi|42573197|ref|NP_974695.1| Splicing factor U2af large subunit A [Arabidopsis
thaliana]
Length = 565
Score = 379 bits (971), Expect = 1e-102
Identities = 212/278 (76%), Positives = 232/278 (83%), Gaps = 18/278 (6%)
Frame = +2
Query: 26 KRHDDREDDRRSRDRDRHHR-SRHRDRS---GERRDR-VRGDDDYRRSSRDRDFDRRRDS 190
++ +R D+ R+RHHR SRHRD S GERR+R R DDDYRR SRDRD DRRRD
Sbjct: 80 EKSKERSRDKDRDHRERHHRSSRHRDHSRERGERRERGGRDDDDYRR-SRDRDHDRRRD- 137
Query: 191 DRDRGGDR-RRRRSRSRGRSER--RSRSPSKTK-RVSGFDMAPPAAGMLDAGAALTGQVP 358
DRGG R RR RSRS+ RSER RSRSPSK+K RVSGFDMAPPA+ ML AGAA+TGQVP
Sbjct: 138 --DRGGRRSRRSRSRSKDRSERRTRSRSPSKSKQRVSGFDMAPPASAMLAAGAAVTGQVP 195
Query: 359 APIPNLLPGNG----MFPLQPGQQFGGVPMMPIQAMTQQATRHARRVYVGGLSPSANEQS 526
P P LPG G MFPL GQ FGG+ MMPIQAMTQQATRHARRVYVGGLSP+ANEQS
Sbjct: 196 -PAPPTLPGAGMFPNMFPLPTGQSFGGLSMMPIQAMTQQATRHARRVYVGGLSPTANEQS 254
Query: 527 VATFFSQAMAAIGGNSAGPGDAVVNVYINYEKKFAFVEMRSVQEASNAMTLDGIIFEGAP 706
VATFFSQ MAA+GGN+AGPGDAVVNVYIN+EKKFAFVEMRSV+EASNAM+LDGIIFEGAP
Sbjct: 255 VATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAP 314
Query: 707 VKVRRPSDYNPALAATLGPSQPIPNLNLAAVGLTPGGA 820
VKVRRPSDYNP+LAATLGPSQP P+LNLAAVGLTPG +
Sbjct: 315 VKVRRPSDYNPSLAATLGPSQPSPHLNLAAVGLTPGAS 352
>gi|15234495|ref|NP_195387.1| Splicing factor U2af large subunit A [Arabidopsis
thaliana]
Length = 573
Score = 379 bits (971), Expect = 1e-102
Identities = 212/278 (76%), Positives = 232/278 (83%), Gaps = 18/278 (6%)
Frame = +2
Query: 26 KRHDDREDDRRSRDRDRHHR-SRHRDRS---GERRDR-VRGDDDYRRSSRDRDFDRRRDS 190
++ +R D+ R+RHHR SRHRD S GERR+R R DDDYRR SRDRD DRRRD
Sbjct: 80 EKSKERSRDKDRDHRERHHRSSRHRDHSRERGERRERGGRDDDDYRR-SRDRDHDRRRD- 137
Query: 191 DRDRGGDR-RRRRSRSRGRSER--RSRSPSKTK-RVSGFDMAPPAAGMLDAGAALTGQVP 358
DRGG R RR RSRS+ RSER RSRSPSK+K RVSGFDMAPPA+ ML AGAA+TGQVP
Sbjct: 138 --DRGGRRSRRSRSRSKDRSERRTRSRSPSKSKQRVSGFDMAPPASAMLAAGAAVTGQVP 195
Query: 359 APIPNLLPGNG----MFPLQPGQQFGGVPMMPIQAMTQQATRHARRVYVGGLSPSANEQS 526
P P LPG G MFPL GQ FGG+ MMPIQAMTQQATRHARRVYVGGLSP+ANEQS
Sbjct: 196 -PAPPTLPGAGMFPNMFPLPTGQSFGGLSMMPIQAMTQQATRHARRVYVGGLSPTANEQS 254
Query: 527 VATFFSQAMAAIGGNSAGPGDAVVNVYINYEKKFAFVEMRSVQEASNAMTLDGIIFEGAP 706
VATFFSQ MAA+GGN+AGPGDAVVNVYIN+EKKFAFVEMRSV+EASNAM+LDGIIFEGAP
Sbjct: 255 VATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAP 314
Query: 707 VKVRRPSDYNPALAATLGPSQPIPNLNLAAVGLTPGGA 820
VKVRRPSDYNP+LAATLGPSQP P+LNLAAVGLTPG +
Sbjct: 315 VKVRRPSDYNPSLAATLGPSQPSPHLNLAAVGLTPGAS 352
>gi|30690730|ref|NP_849509.1| Splicing factor U2af large subunit A [Arabidopsis
thaliana]
Length = 542
Score = 379 bits (971), Expect = 1e-102
Identities = 212/278 (76%), Positives = 232/278 (83%), Gaps = 18/278 (6%)
Frame = +2
Query: 26 KRHDDREDDRRSRDRDRHHR-SRHRDRS---GERRDR-VRGDDDYRRSSRDRDFDRRRDS 190
++ +R D+ R+RHHR SRHRD S GERR+R R DDDYRR SRDRD DRRRD
Sbjct: 80 EKSKERSRDKDRDHRERHHRSSRHRDHSRERGERRERGGRDDDDYRR-SRDRDHDRRRD- 137
Query: 191 DRDRGGDR-RRRRSRSRGRSER--RSRSPSKTK-RVSGFDMAPPAAGMLDAGAALTGQVP 358
DRGG R RR RSRS+ RSER RSRSPSK+K RVSGFDMAPPA+ ML AGAA+TGQVP
Sbjct: 138 --DRGGRRSRRSRSRSKDRSERRTRSRSPSKSKQRVSGFDMAPPASAMLAAGAAVTGQVP 195
Query: 359 APIPNLLPGNG----MFPLQPGQQFGGVPMMPIQAMTQQATRHARRVYVGGLSPSANEQS 526
P P LPG G MFPL GQ FGG+ MMPIQAMTQQATRHARRVYVGGLSP+ANEQS
Sbjct: 196 -PAPPTLPGAGMFPNMFPLPTGQSFGGLSMMPIQAMTQQATRHARRVYVGGLSPTANEQS 254
Query: 527 VATFFSQAMAAIGGNSAGPGDAVVNVYINYEKKFAFVEMRSVQEASNAMTLDGIIFEGAP 706
VATFFSQ MAA+GGN+AGPGDAVVNVYIN+EKKFAFVEMRSV+EASNAM+LDGIIFEGAP
Sbjct: 255 VATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAP 314
Query: 707 VKVRRPSDYNPALAATLGPSQPIPNLNLAAVGLTPGGA 820
VKVRRPSDYNP+LAATLGPSQP P+LNLAAVGLTPG +
Sbjct: 315 VKVRRPSDYNPSLAATLGPSQPSPHLNLAAVGLTPGAS 352
>gi|147840634|emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis
vinifera]
Length = 565
Score = 367 bits (941), Expect = 4e-099
Identities = 203/280 (72%), Positives = 223/280 (79%), Gaps = 15/280 (5%)
Frame = +2
Query: 5 DRDGERIKRHDDREDDRRSRDRDRHHRSRHRDRSGER-RDRVRGDDDYRRSSRDRDFDRR 181
DRD ER K D D + RDRDR R R+RDRS R R R R DDD+ RS RD+DRR
Sbjct: 72 DRDRERDKERDRDRDRDKERDRDR--RDRYRDRSDRRERTRDRDDDDFHRS---RDYDRR 126
Query: 182 RDSDRDRGG-DRRRRRSRSRGRSERRSRSP----SKTKRVSGFDMAPPAAGMLDAGAALT 346
RD DRDR +RR RSRS+GRSE+RSRS SK+KRVSGFDMAPPA+ ML AA
Sbjct: 127 RDFDRDRDDRHKRRSRSRSKGRSEQRSRSRSASLSKSKRVSGFDMAPPASAMLAGAAAAA 186
Query: 347 GQVPAPIPNLLPG--NGMFPLQPGQQFGGVPMMPIQAMTQQATRHARRVYVGGLSPSANE 520
GQ+P P +PG MFPL G QFG +P+MP+QAMTQQATRHARRVYVGGLSP+ANE
Sbjct: 187 GQIPGTTPT-IPGMFPNMFPLASG-QFGALPVMPVQAMTQQATRHARRVYVGGLSPTANE 244
Query: 521 QSVATFFSQAMAAIGGNSAGPGDAVVNVYINYEKKFAFVEMRSVQEASNAMTLDGIIFEG 700
QSVATFFSQ M+AIGGN+AGPGDAVVNVYIN+EKKFAFVEMRSV+EASNAM LDGIIFEG
Sbjct: 245 QSVATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 304
Query: 701 APVKVRRPSDYNPALAATLGPSQPIPNLNLAAVGLTPGGA 820
APVKVRRPSDYNP+LAATLGPSQP PNLNLAAVGLTPG A
Sbjct: 305 APVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSA 344
>gi|225430812|ref|XP_002271463.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 565
Score = 367 bits (941), Expect = 4e-099
Identities = 203/280 (72%), Positives = 223/280 (79%), Gaps = 15/280 (5%)
Frame = +2
Query: 5 DRDGERIKRHDDREDDRRSRDRDRHHRSRHRDRSGER-RDRVRGDDDYRRSSRDRDFDRR 181
DRD ER K D D + RDRDR R R+RDRS R R R R DDD+ RS RD+DRR
Sbjct: 72 DRDRERDKERDRDRDRDKERDRDR--RDRYRDRSDRRERTRDRDDDDFHRS---RDYDRR 126
Query: 182 RDSDRDRGG-DRRRRRSRSRGRSERRSRSP----SKTKRVSGFDMAPPAAGMLDAGAALT 346
RD DRDR +RR RSRS+GRSE+RSRS SK+KRVSGFDMAPPA+ ML AA
Sbjct: 127 RDFDRDRDDRHKRRSRSRSKGRSEQRSRSRSASLSKSKRVSGFDMAPPASAMLAGAAAAA 186
Query: 347 GQVPAPIPNLLPG--NGMFPLQPGQQFGGVPMMPIQAMTQQATRHARRVYVGGLSPSANE 520
GQ+P P +PG MFPL G QFG +P+MP+QAMTQQATRHARRVYVGGLSP+ANE
Sbjct: 187 GQIPGTTPT-IPGMFPNMFPLASG-QFGALPVMPVQAMTQQATRHARRVYVGGLSPTANE 244
Query: 521 QSVATFFSQAMAAIGGNSAGPGDAVVNVYINYEKKFAFVEMRSVQEASNAMTLDGIIFEG 700
QSVATFFSQ M+AIGGN+AGPGDAVVNVYIN+EKKFAFVEMRSV+EASNAM LDGIIFEG
Sbjct: 245 QSVATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 304
Query: 701 APVKVRRPSDYNPALAATLGPSQPIPNLNLAAVGLTPGGA 820
APVKVRRPSDYNP+LAATLGPSQP PNLNLAAVGLTPG A
Sbjct: 305 APVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSA 344
>gi|156070776|gb|ABU45190.1| unknown [Capsicum frutescens]
Length = 551
Score = 363 bits (930), Expect = 7e-098
Identities = 195/280 (69%), Positives = 225/280 (80%), Gaps = 15/280 (5%)
Frame = +2
Query: 2 RDRDGERIKRHD-DREDDR-RSRDRDRHHRSRHRDRSGER---RDRVRGDDDYRRSSRDR 166
R+RD +R K D DR+ DR + +DRDRHHR RHRDRS R R R R +DD R+ R
Sbjct: 59 RNRDRDRGKERDKDRDRDREKEKDRDRHHRDRHRDRSDRRERERTRDRDEDDLHRT---R 115
Query: 167 DFDRRRDSDRDRGGDRRRRRSRSRGRSERRSRSPSKTKRVSGFDMAPPAAGMLDAGAALT 346
D+DRRRD+D+DR DR+R + SRGRS RSRSPSK+KR+SGFDMAPP + +L +T
Sbjct: 116 DYDRRRDNDKDR-EDRQRHKPSSRGRS--RSRSPSKSKRISGFDMAPPTSALLPGATDVT 172
Query: 347 GQVPAPIPNLLPG--NGMFPLQPGQQFGGVPMMPIQAMTQQATRHARRVYVGGLSPSANE 520
GQVP P+ +PG + MFPL G QFG +P+MP+QAMTQQATRHARRVYVGGL P+ANE
Sbjct: 173 GQVPGANPS-IPGMFSNMFPLAAG-QFGALPIMPVQAMTQQATRHARRVYVGGLPPTANE 230
Query: 521 QSVATFFSQAMAAIGGNSAGPGDAVVNVYINYEKKFAFVEMRSVQEASNAMTLDGIIFEG 700
QSVATFFS M AIGGN+AGPGDAVVNVYIN+EKKFAFVEMRSV+EASNAM LDG+IFEG
Sbjct: 231 QSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEG 290
Query: 701 APVKVRRPSDYNPALAATLGPSQPIPNLNLAAVGLTPGGA 820
PVKVRRPSDYNP+LAATLGPSQP PNLNLAAVGLTPG +
Sbjct: 291 GPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSS 330
>gi|156070797|gb|ABU45209.1| unknown [Solanum bulbocastanum]
Length = 558
Score = 361 bits (926), Expect = 2e-097
Identities = 194/281 (69%), Positives = 222/281 (79%), Gaps = 16/281 (5%)
Frame = +2
Query: 2 RDRDGERIKRHDDREDDR-RSRDRDRHHRSRHRDRSGER-RDRVRGDDDYRRSSRDRDFD 175
RDR ER K DR+ DR R +DRDRHHR RHRDRS R R R R +DD +R+ RD+D
Sbjct: 65 RDRVKERDK---DRDRDREREKDRDRHHRDRHRDRSDRRERTRDRDEDDLQRT---RDYD 118
Query: 176 RRRDSDRDRGGDRRRRRSRSRGRSER----RSRSPSKTKRVSGFDMAPPAAGMLDAGAAL 343
RRRD+D+DR DR+R + SRGRSE RSRSPSK+KR+SGFDMAPP + +L +
Sbjct: 119 RRRDNDKDR-EDRQRHKPSSRGRSEHRSRSRSRSPSKSKRISGFDMAPPTSALLSGATDV 177
Query: 344 TGQVPAPIPNLLPG--NGMFPLQPGQQFGGVPMMPIQAMTQQATRHARRVYVGGLSPSAN 517
GQVP +PG + MFPL G QFG +P+MP+QAMTQQATRHARRVYVGGL P+AN
Sbjct: 178 AGQVPGTTNPSIPGMFSNMFPLAAG-QFGALPIMPVQAMTQQATRHARRVYVGGLPPTAN 236
Query: 518 EQSVATFFSQAMAAIGGNSAGPGDAVVNVYINYEKKFAFVEMRSVQEASNAMTLDGIIFE 697
EQSVATFFS M AIGGN+AGPGDAVVNVYIN+EKKFAFVEMRSV+EASNAM LDG++FE
Sbjct: 237 EQSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVVFE 296
Query: 698 GAPVKVRRPSDYNPALAATLGPSQPIPNLNLAAVGLTPGGA 820
G PVKVRRPSDYNP+LAATLGPSQP PNLNLAAVGLTPG +
Sbjct: 297 GGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSS 337
>gi|156070760|gb|ABU45175.1| unknown [Solanum melongena]
Length = 553
Score = 359 bits (921), Expect = 8e-097
Identities = 191/278 (68%), Positives = 221/278 (79%), Gaps = 12/278 (4%)
Frame = +2
Query: 2 RDRDGERIKRHD-DREDDR-RSRDRDRHHRSRHRDRSGER-RDRVRGDDDYRRSSRDRDF 172
RDRD +R+K D DR+ +R R +DRDRHHR RHRDRS R R R R +DD R+ RD+
Sbjct: 60 RDRDRDRVKERDKDRDREREREKDRDRHHRDRHRDRSDRRERSRDRDEDDLPRT---RDY 116
Query: 173 DRRRDSDRDRGGDRRRRRSRSRGRSERRSRSPSKTKRVSGFDMAPPAAGMLDAGAALTGQ 352
DRRR++D+DR DR R + SR RS RSRSPSK+KR+SGFDMAPP + +L + GQ
Sbjct: 117 DRRRNNDKDR-EDRHRHKPSSRARS--RSRSPSKSKRISGFDMAPPTSALLSGATDVAGQ 173
Query: 353 VPAPIPNLLPG--NGMFPLQPGQQFGGVPMMPIQAMTQQATRHARRVYVGGLSPSANEQS 526
VP +PG + MFP+ G QFG +P+MP+QAMTQQATRHARRVYVGGL P+ANEQS
Sbjct: 174 VPGITNPSIPGMFSNMFPVAAG-QFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQS 232
Query: 527 VATFFSQAMAAIGGNSAGPGDAVVNVYINYEKKFAFVEMRSVQEASNAMTLDGIIFEGAP 706
VATFFS M AIGGN+AGPGDAVVNVYIN+EKKFAFVEMRSV+EASNAM LDG+IFEG P
Sbjct: 233 VATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEGGP 292
Query: 707 VKVRRPSDYNPALAATLGPSQPIPNLNLAAVGLTPGGA 820
VKVRRPSDYNP+LAATLGPSQP PNLNLAAVGLTPG +
Sbjct: 293 VKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSS 330
>gi|188998293|gb|ACD67872.1| U2 snRNP auxiliary factor large subunit [Solanum
melongena]
Length = 554
Score = 359 bits (921), Expect = 8e-097
Identities = 191/278 (68%), Positives = 221/278 (79%), Gaps = 12/278 (4%)
Frame = +2
Query: 2 RDRDGERIKRHD-DREDDR-RSRDRDRHHRSRHRDRSGER-RDRVRGDDDYRRSSRDRDF 172
RDRD +R+K D DR+ +R R +DRDRHHR RHRDRS R R R R +DD R+ RD+
Sbjct: 61 RDRDRDRVKERDKDRDREREREKDRDRHHRDRHRDRSDRRERSRDRDEDDLPRT---RDY 117
Query: 173 DRRRDSDRDRGGDRRRRRSRSRGRSERRSRSPSKTKRVSGFDMAPPAAGMLDAGAALTGQ 352
DRRR++D+DR DR R + SR RS RSRSPSK+KR+SGFDMAPP + +L + GQ
Sbjct: 118 DRRRNNDKDR-EDRHRHKPSSRARS--RSRSPSKSKRISGFDMAPPTSALLSGATDVAGQ 174
Query: 353 VPAPIPNLLPG--NGMFPLQPGQQFGGVPMMPIQAMTQQATRHARRVYVGGLSPSANEQS 526
VP +PG + MFP+ G QFG +P+MP+QAMTQQATRHARRVYVGGL P+ANEQS
Sbjct: 175 VPGITNPSIPGMFSNMFPVAAG-QFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQS 233
Query: 527 VATFFSQAMAAIGGNSAGPGDAVVNVYINYEKKFAFVEMRSVQEASNAMTLDGIIFEGAP 706
VATFFS M AIGGN+AGPGDAVVNVYIN+EKKFAFVEMRSV+EASNAM LDG+IFEG P
Sbjct: 234 VATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEGGP 293
Query: 707 VKVRRPSDYNPALAATLGPSQPIPNLNLAAVGLTPGGA 820
VKVRRPSDYNP+LAATLGPSQP PNLNLAAVGLTPG +
Sbjct: 294 VKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSS 331
>gi|334187224|ref|NP_001190937.1| Splicing factor U2af large subunit A
[Arabidopsis thaliana]
Length = 551
Score = 354 bits (906), Expect = 4e-095
Identities = 199/281 (70%), Positives = 222/281 (79%), Gaps = 18/281 (6%)
Frame = +2
Query: 2 RDRDGERIKRHDDREDDRRSRDRD-RHHRSRHRDRSGERRDRVRGDDDYRRSSRDRDFDR 178
RD+D ER D E RRSRDRD + R RD+ + R+R +R SR+R +R
Sbjct: 60 RDKDRER-----DSEVSRRSRDRDGEKSKERSRDKDRDHRERHHRSSRHRDHSRERG-ER 113
Query: 179 RRDSDRDRGGDRRRRRSRSRGRSER--RSRSPSKTK-RVSGFDMAPPAAGMLDAGAALTG 349
R +R G RR RSRS+ RSER RSRSPSK+K RVSGFDMAPPA+ ML AGAA+TG
Sbjct: 114 R---ERGGGRRSRRSRSRSKDRSERRTRSRSPSKSKQRVSGFDMAPPASAMLAAGAAVTG 170
Query: 350 QVPAPIPNLLPGNG----MFPLQPGQQFGGVPMMPIQAMTQQATRHARRVYVGGLSPSAN 517
QVP P P LPG G MFPL GQ FGG+ MMPIQAMTQQATRHARRVYVGGLSP+AN
Sbjct: 171 QVP-PAPPTLPGAGMFPNMFPLPTGQSFGGLSMMPIQAMTQQATRHARRVYVGGLSPTAN 229
Query: 518 EQSVATFFSQAMAAIGGNSAGPGDAVVNVYINYEKKFAFVEMRSVQEASNAMTLDGIIFE 697
EQSVATFFSQ MAA+GGN+AGPGDAVVNVYIN+EKKFAFVEMRSV+EASNAM+LDGIIFE
Sbjct: 230 EQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFE 289
Query: 698 GAPVKVRRPSDYNPALAATLGPSQPIPNLNLAAVGLTPGGA 820
GAPVKVRRPSDYNP+LAATLGPSQP P+LNLAAVGLTPG +
Sbjct: 290 GAPVKVRRPSDYNPSLAATLGPSQPSPHLNLAAVGLTPGAS 330
>gi|156070781|gb|ABU45194.1| unknown [Petunia integrifolia subsp. inflata]
Length = 557
Score = 349 bits (895), Expect = 8e-094
Identities = 194/280 (69%), Positives = 215/280 (76%), Gaps = 18/280 (6%)
Frame = +2
Query: 2 RDRDGERIKRHDDREDDRRSRDRDRHHRSRHRDRSGER-RDRVRGDDDYRRSSRDRDFDR 178
RDRD +R DRE R +DRDRHHR RHRDRS R R+R R D D SR RD+DR
Sbjct: 71 RDRDRDR-----DRE---REKDRDRHHRDRHRDRSDRRERERTR-DRDEDDLSRSRDYDR 121
Query: 179 RRDSDRDRGGDRRRR---RSRSRGRSERRSRSPSK-TKRVSGFDMAPPAAGMLDAGAALT 346
RRD+D+DR R R RSRS RS RSRSPSK + +SGFDMAPP + +L
Sbjct: 122 RRDTDKDREDRHRHRPSSRSRSEHRSRSRSRSPSKRSVPISGFDMAPPTSALLPGATDTA 181
Query: 347 GQVPAPIPNLLPG--NGMFPLQPGQQFGGVPMMPIQAMTQQATRHARRVYVGGLSPSANE 520
GQVP P+ +PG + MFPL G QFG +P+MPIQAMTQQATRHARRVYVGGL PSANE
Sbjct: 182 GQVPGASPS-IPGMFSNMFPLTSG-QFGALPVMPIQAMTQQATRHARRVYVGGLPPSANE 239
Query: 521 QSVATFFSQAMAAIGGNSAGPGDAVVNVYINYEKKFAFVEMRSVQEASNAMTLDGIIFEG 700
QSVATFFS M AIGGN+AGPGDAVVNVYIN+EKKFAFVEMRSV+EASNAM LDG+IFEG
Sbjct: 240 QSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEG 299
Query: 701 APVKVRRPSDYNPALAATLGPSQPIPNLNLAAVGLTPGGA 820
PVKVRRPSDYNP+LAATLGPSQP PNLNLAAVGLTPG +
Sbjct: 300 GPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSS 339
>gi|12323333|gb|AAG51641.1|AC018908_7 putative U2 snRNP auxiliary factor;
19096-22891 [Arabidopsis thaliana]
Length = 568
Score = 345 bits (883), Expect = 2e-092
Identities = 188/276 (68%), Positives = 212/276 (76%), Gaps = 12/276 (4%)
Frame = +2
Query: 2 RDRDGERIKRHDDREDDRRSRDRDRHHRSRHRDRSGERRD-RVRGDDDYRRSSRDRDFDR 178
RDRD E+ + D + + R RDRHHR RHRDRS ER + R DDD+ R SRDR DR
Sbjct: 77 RDRDREKSRDRDRDRERSKDRQRDRHHRDRHRDRSRERSEKRDDLDDDHHRRSRDR--DR 134
Query: 179 RRDSDRDRG-GDRRRRRSRSRGRSERRSRSPSKTKRVSGFDMAPPAAGMLDAGAALTGQV 355
RR DRDR RRR RSRSR RSERRS +KR SGFDMAPP A AA GQV
Sbjct: 135 RRSRDRDREVRHRRRSRSRSRSRSERRS-----SKRRSGFDMAPPDMLAATAVAAAAGQV 189
Query: 356 PA-PIPNLLPG--NGMFPLQPGQQFGGVPMMPIQAMTQQATRHARRVYVGGLSPSANEQS 526
P+ P +PG + MFP+ PGQQ G +P++P+QAMTQQATRHARRVYVGGL P+ANEQS
Sbjct: 190 PSVPTTATIPGMFSNMFPMVPGQQLGALPVLPVQAMTQQATRHARRVYVGGLPPTANEQS 249
Query: 527 VATFFSQAMAAIGGNSAGPGDAVVNVYINYEKKFAFVEMRSVQEASNAMTLDGIIFEGAP 706
V+TFFSQ M+AIGGN+AGPGDAVVNVYIN+EKKFAFVEMRSV+EASNAM LDGII EG P
Sbjct: 250 VSTFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIILEGVP 309
Query: 707 VKVRRPSDYNPALAATLGPSQPIPNLNLAAVGLTPG 814
VKVRRP+DYNP+LAATLGPSQP PNLNL AVGL+ G
Sbjct: 310 VKVRRPTDYNPSLAATLGPSQPNPNLNLGAVGLSSG 345
>gi|224134362|ref|XP_002327819.1| predicted protein [Populus trichocarpa]
Length = 541
Score = 340 bits (871), Expect = 5e-091
Identities = 196/285 (68%), Positives = 216/285 (75%), Gaps = 36/285 (12%)
Frame = +2
Query: 38 DREDDR---RSRDRDR---HHRSRHRDRSGERRD--RVRGDDDYRRSSRDRDFDRRRDSD 193
DRE R R RDRD+ HR RHRD S ERRD R R DDDY RS RD+DRRRD D
Sbjct: 44 DREKSRGRDRERDRDKDSDRHRDRHRDCS-ERRDRGRDRDDDDYYRS---RDYDRRRDYD 99
Query: 194 RDRGGDRRRR--RSRSRGRSERRSRSPSKTKRVSGFDMAPPAAGMLD-----------AG 334
RD DR RR RSRS+GRSE RS +KR+SGFDMAPP++ +L A
Sbjct: 100 RD-SEDRHRRLSRSRSKGRSEHRS-----SKRMSGFDMAPPSSAILPNAAAAAAAAAAAS 153
Query: 335 AALTGQVPA---PIPNLLPGNGMFPLQPGQQFGGVPMMPIQAMTQQATRHARRVYVGGLS 505
AA +GQ+ PIP + P MFPL QQFG +P+MP+QAMTQQATRHARRVYVGGL
Sbjct: 154 AAASGQIAGTTPPIPGMFP--NMFPLGTSQQFGALPVMPVQAMTQQATRHARRVYVGGLP 211
Query: 506 PSANEQSVATFFSQAMAAIGGNSAGPGDAVVNVYINYEKKFAFVEMRSVQEASNAMTLDG 685
P+ANEQSVATFFSQ MAAIGGN+AGPGDAVVNVYIN+EKKFAFVEMRSV+EASNAM LDG
Sbjct: 212 PTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDG 271
Query: 686 IIFEGAPVKVRRPSDYNPALAATLGPSQPIPNLNLAAVGLTPGGA 820
IIFEGAPVKVRRPSDYNP+LAATLGPSQP PNLNL+AVGL PG A
Sbjct: 272 IIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLSAVGLAPGSA 316
>gi|30696485|ref|NP_176287.3| Splicing factor U2af large subunit B [Arabidopsis
thaliana]
Length = 589
Score = 334 bits (855), Expect = 4e-089
Identities = 188/275 (68%), Positives = 209/275 (76%), Gaps = 26/275 (9%)
Frame = +2
Query: 56 RSRDRDRHHRSRHRDRSGERRD-RVRGDDDYRRSSRDRDFDRRRDSDRDRG-GDRRRRRS 229
+ R RDRHHR RHRDRS ER + R DDD+ R SRDR DRRR DRDR RRR RS
Sbjct: 96 KDRQRDRHHRDRHRDRSRERSEKRDDLDDDHHRRSRDR--DRRRSRDRDREVRHRRRSRS 153
Query: 230 RSRGRSERRSRSP----------------SKTKRVSGFDMAPPAAGMLDAGA-ALTGQVP 358
RSR RSERRSRS SK+KR SGFDMAPP ML A A A GQVP
Sbjct: 154 RSRSRSERRSRSEHRHKSEHRSRSRSRSRSKSKRRSGFDMAPP--DMLAATAVAAAGQVP 211
Query: 359 A-PIPNLLPG--NGMFPLQPGQQFGGVPMMPIQAMTQQATRHARRVYVGGLSPSANEQSV 529
+ P +PG + MFP+ PGQQ G +P++P+QAMTQQATRHARRVYVGGL P+ANEQSV
Sbjct: 212 SVPTTATIPGMFSNMFPMVPGQQLGALPVLPVQAMTQQATRHARRVYVGGLPPTANEQSV 271
Query: 530 ATFFSQAMAAIGGNSAGPGDAVVNVYINYEKKFAFVEMRSVQEASNAMTLDGIIFEGAPV 709
+TFFSQ M+AIGGN+AGPGDAVVNVYIN+EKKFAFVEMRSV+EASNAM LDGII EG PV
Sbjct: 272 STFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIILEGVPV 331
Query: 710 KVRRPSDYNPALAATLGPSQPIPNLNLAAVGLTPG 814
KVRRP+DYNP+LAATLGPSQP PNLNL AVGL+ G
Sbjct: 332 KVRRPTDYNPSLAATLGPSQPNPNLNLGAVGLSSG 366
>gi|255568277|ref|XP_002525113.1| splicing factor u2af large subunit, putative
[Ricinus communis]
Length = 549
Score = 332 bits (849), Expect = 2e-088
Identities = 184/274 (67%), Positives = 207/274 (75%), Gaps = 12/274 (4%)
Frame = +2
Query: 26 KRHDDREDDRRSRDRDRHH-RSRHRDRSGER-RDRVRGDDDYRRSSRDRDFDR-RRDSDR 196
+R D++ DR RDRDRH RS R+R +R D DY R R RD+DR R + +
Sbjct: 99 ERDRDKDRDRHHRDRDRHRDRSERRERGRDRDDDDYHRSRDYDRDRR-RDYDRDREERHK 157
Query: 197 DRGGDRRRRRSRSRGRSERRSRSPSKTKRVSGFDMAPPAAGMLDAGAAL---TGQVP--A 361
R R RS R +S RSRS SK+KR+SGFDMAPP + ML AA+ GQ+P A
Sbjct: 158 RRSPSPSRGRSERRSKSRSRSRSRSKSKRISGFDMAPPPSAMLTGAAAVAAAAGQIPGTA 217
Query: 362 P-IPNLLPGNGMFPLQPGQQFGGVPMMPIQAMTQQATRHARRVYVGGLSPSANEQSVATF 538
P IP + P MFPL GQQFG +P+MP+QAMTQQATRHARRVYVGGL P+ANEQSVATF
Sbjct: 218 PAIPGMFP--NMFPLGTGQQFGTLPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATF 275
Query: 539 FSQAMAAIGGNSAGPGDAVVNVYINYEKKFAFVEMRSVQEASNAMTLDGIIFEGAPVKVR 718
FS MAAIGGN+AGPGDAVVNVYIN+EKKFAFVEMRSV+EASNAM LDGIIFEGAPVKVR
Sbjct: 276 FSHVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVR 335
Query: 719 RPSDYNPALAATLGPSQPIPNLNLAAVGLTPGGA 820
RPSDYNP+LAATLGPSQP PNLNL AVGLTPG A
Sbjct: 336 RPSDYNPSLAATLGPSQPNPNLNLGAVGLTPGSA 369
>gi|22655131|gb|AAM98156.1| putative U2 snRNP auxiliary factor [Arabidopsis
thaliana]
Length = 589
Score = 331 bits (848), Expect = 2e-088
Identities = 187/275 (68%), Positives = 208/275 (75%), Gaps = 26/275 (9%)
Frame = +2
Query: 56 RSRDRDRHHRSRHRDRSGERRD-RVRGDDDYRRSSRDRDFDRRRDSDRDRG-GDRRRRRS 229
+ R RDRHHR RHRDRS ER + R DDD+ R SRDR DRRR DRDR RRR RS
Sbjct: 96 KDRQRDRHHRDRHRDRSRERSEKRDDLDDDHHRRSRDR--DRRRSRDRDREVRHRRRSRS 153
Query: 230 RSRGRSERRSRSP----------------SKTKRVSGFDMAPPAAGMLDAGA-ALTGQVP 358
RSR RSERRSRS SK+KR SGFDMAPP ML A A A GQVP
Sbjct: 154 RSRSRSERRSRSEHRHKSEHRSRSRSRSRSKSKRRSGFDMAPP--DMLAATAVAAAGQVP 211
Query: 359 A-PIPNLLPG--NGMFPLQPGQQFGGVPMMPIQAMTQQATRHARRVYVGGLSPSANEQSV 529
+ P +PG + MFP+ PGQQ G +P++P+QAMTQQATRHA RVYVGGL P+ANEQSV
Sbjct: 212 SVPTTATIPGMFSNMFPMVPGQQLGALPVLPVQAMTQQATRHAPRVYVGGLPPTANEQSV 271
Query: 530 ATFFSQAMAAIGGNSAGPGDAVVNVYINYEKKFAFVEMRSVQEASNAMTLDGIIFEGAPV 709
+TFFSQ M+AIGGN+AGPGDAVVNVYIN+EKKFAFVEMRSV+EASNAM LDGII EG PV
Sbjct: 272 STFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIILEGVPV 331
Query: 710 KVRRPSDYNPALAATLGPSQPIPNLNLAAVGLTPG 814
KVRRP+DYNP+LAATLGPSQP PNLNL AVGL+ G
Sbjct: 332 KVRRPTDYNPSLAATLGPSQPNPNLNLGAVGLSSG 366
>gi|115486373|ref|NP_001068330.1| Os11g0636900 [Oryza sativa Japonica Group]
Length = 574
Score = 329 bits (843), Expect = 9e-088
Identities = 159/219 (72%), Positives = 181/219 (82%)
Frame = +3
Query: 825 LEGPDRLFVGGLPYYIPESQIRELLESLGALKGFDLVRDRETGNSKGYAFCAYQDPAATD 1004
LEGPDR+FVGGLPYY E+Q+RELLES G L+GFDLV+DRETGNSKGYAFC YQD TD
Sbjct: 354 LEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 413
Query: 1005 IACAALNGITMGDKTLCVRRANQGTAQTKPEQENVLLHAQQQVAFQKIMLQQGAAAAATK 1184
IACAALNGI MGDKTL VRRANQG +Q +PEQE++LLH QQQ QK+M Q G A TK
Sbjct: 414 IACAALNGIKMGDKTLTVRRANQGASQPRPEQESMLLHVQQQAQMQKLMFQVGGGALPTK 473
Query: 1185 VVCLTQVVTEDELRNDEEYEDIVVDMRDEGGKLGALTKVVIPRPSSSGEPVQGVGKVFLE 1364
VVCLTQVV+ DELR+DEEYEDIV DMR+EG + G L KVVIPRP SG PV GVG+VFLE
Sbjct: 474 VVCLTQVVSPDELRDDEEYEDIVQDMREEGCRYGNLVKVVIPRPDPSGAPVAGVGRVFLE 533
Query: 1365 YAETESSNRARNGMNGRKFGGNEVVAVFYPEDKFEQGDY 1481
+A+ ESS +A+NGM+GRKF N+VVAVFYPEDKF +G Y
Sbjct: 534 FADVESSTKAKNGMHGRKFANNQVVAVFYPEDKFAEGQY 572
>gi|218186084|gb|EEC68511.1| hypothetical protein OsI_36782 [Oryza sativa Indica
Group]
Length = 574
Score = 329 bits (841), Expect = 1e-087
Identities = 158/219 (72%), Positives = 181/219 (82%)
Frame = +3
Query: 825 LEGPDRLFVGGLPYYIPESQIRELLESLGALKGFDLVRDRETGNSKGYAFCAYQDPAATD 1004
LEGPDR+FVGGLPYY E+Q+RELLES G L+GFDLV+DRETGNSKGYAFC YQD TD
Sbjct: 354 LEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 413
Query: 1005 IACAALNGITMGDKTLCVRRANQGTAQTKPEQENVLLHAQQQVAFQKIMLQQGAAAAATK 1184
IACAALNGI MGDKTL VRRANQG +Q +PEQE++LLH QQQ QK+M Q G A TK
Sbjct: 414 IACAALNGIKMGDKTLTVRRANQGASQPRPEQESMLLHVQQQAQMQKLMFQVGGGALPTK 473
Query: 1185 VVCLTQVVTEDELRNDEEYEDIVVDMRDEGGKLGALTKVVIPRPSSSGEPVQGVGKVFLE 1364
VVCLTQV++ DELR+DEEYEDIV DMR+EG + G L KVVIPRP SG PV GVG+VFLE
Sbjct: 474 VVCLTQVISPDELRDDEEYEDIVQDMREEGCRYGNLVKVVIPRPDPSGAPVAGVGRVFLE 533
Query: 1365 YAETESSNRARNGMNGRKFGGNEVVAVFYPEDKFEQGDY 1481
+A+ ESS +A+NGM+GRKF N+VVAVFYPEDKF +G Y
Sbjct: 534 FADIESSTKAKNGMHGRKFANNQVVAVFYPEDKFAEGQY 572
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 935,681,177,451
Number of Sequences: 15229318
Number of Extensions: 935681177451
Number of Successful Extensions: 273114764
Number of sequences better than 0.0: 0
|
