BLASTX 7.6.2
Query= UN08101 /QuerySize=1627
(1626 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O23212|U2A2A_ARATH Splicing factor U2af large subunit A OS=Ar... 379 5e-104
sp|Q9ZR39|U2A2A_NICPL Splicing factor U2af large subunit A OS=Ni... 357 2e-097
sp|Q9ZR40|U2A2B_NICPL Splicing factor U2af large subunit B OS=Ni... 351 1e-095
sp|Q8L716|U2A2B_ARATH Splicing factor U2af large subunit B OS=Ar... 334 1e-090
sp|Q2R0Q1|U2A2A_ORYSJ Splicing factor U2af large subunit A OS=Or... 329 4e-089
sp|Q2QKB4|U2A2B_WHEAT Splicing factor U2af large subunit B OS=Tr... 324 2e-087
sp|Q2QZL4|U2A2B_ORYSJ Splicing factor U2af large subunit B OS=Or... 316 3e-085
sp|Q2QKB3|U2A2A_WHEAT Splicing factor U2af large subunit A OS=Tr... 274 1e-072
sp|P26368|U2AF2_HUMAN Splicing factor U2AF 65 kDa subunit OS=Hom... 167 3e-040
sp|P26369|U2AF2_MOUSE Splicing factor U2AF 65 kDa subunit OS=Mus... 166 4e-040
sp|Q24562|U2AF2_DROME Splicing factor U2AF 50 kDa subunit OS=Dro... 165 9e-040
>sp|O23212|U2A2A_ARATH Splicing factor U2af large subunit A OS=Arabidopsis
thaliana GN=U2AF65A PE=2 SV=2
Length = 573
Score = 379 bits (971), Expect = 5e-104
Identities = 212/278 (76%), Positives = 232/278 (83%), Gaps = 18/278 (6%)
Frame = +2
Query: 26 KRHDDREDDRRSRDRDRHHR-SRHRDRS---GERRDR-VRGDDDYRRSSRDRDFDRRRDS 190
++ +R D+ R+RHHR SRHRD S GERR+R R DDDYRR SRDRD DRRRD
Sbjct: 80 EKSKERSRDKDRDHRERHHRSSRHRDHSRERGERRERGGRDDDDYRR-SRDRDHDRRRD- 137
Query: 191 DRDRGGDR-RRRRSRSRGRSER--RSRSPSKTK-RVSGFDMAPPAAGMLDAGAALTGQVP 358
DRGG R RR RSRS+ RSER RSRSPSK+K RVSGFDMAPPA+ ML AGAA+TGQVP
Sbjct: 138 --DRGGRRSRRSRSRSKDRSERRTRSRSPSKSKQRVSGFDMAPPASAMLAAGAAVTGQVP 195
Query: 359 APIPNLLPGNG----MFPLQPGQQFGGVPMMPIQAMTQQATRHARRVYVGGLSPSANEQS 526
P P LPG G MFPL GQ FGG+ MMPIQAMTQQATRHARRVYVGGLSP+ANEQS
Sbjct: 196 -PAPPTLPGAGMFPNMFPLPTGQSFGGLSMMPIQAMTQQATRHARRVYVGGLSPTANEQS 254
Query: 527 VATFFSQAMAAIGGNSAGPGDAVVNVYINYEKKFAFVEMRSVQEASNAMTLDGIIFEGAP 706
VATFFSQ MAA+GGN+AGPGDAVVNVYIN+EKKFAFVEMRSV+EASNAM+LDGIIFEGAP
Sbjct: 255 VATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAP 314
Query: 707 VKVRRPSDYNPALAATLGPSQPIPNLNLAAVGLTPGGA 820
VKVRRPSDYNP+LAATLGPSQP P+LNLAAVGLTPG +
Sbjct: 315 VKVRRPSDYNPSLAATLGPSQPSPHLNLAAVGLTPGAS 352
Score = 359 bits (919), Expect = 6e-098
Identities = 177/219 (80%), Positives = 192/219 (87%), Gaps = 2/219 (0%)
Frame = +3
Query: 825 LEGPDRLFVGGLPYYIPESQIRELLESLGALKGFDLVRDRETGNSKGYAFCAYQDPAATD 1004
LEGPDR+FVGGLPYY ESQ+RELLES G LKGFDLV+DRETGNSKGYAFC YQD + TD
Sbjct: 355 LEGPDRIFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTD 414
Query: 1005 IACAALNGITMGDKTLCVRRANQGTAQTKPEQENVLLHAQQQVAFQKIMLQQGAAAAATK 1184
IACAALNGI MGDKTL VRRANQGT KPEQENVLLHAQQQ+AFQ++MLQ G A AT
Sbjct: 415 IACAALNGIKMGDKTLTVRRANQGTMLQKPEQENVLLHAQQQIAFQRVMLQPG--AVATT 472
Query: 1185 VVCLTQVVTEDELRNDEEYEDIVVDMRDEGGKLGALTKVVIPRPSSSGEPVQGVGKVFLE 1364
VVCLTQVVTEDELR+DEEY DI+ DMR EGGK GALT VVIPRPS +GEPV G+GKVFL+
Sbjct: 473 VVCLTQVVTEDELRDDEEYGDIMEDMRQEGGKFGALTNVVIPRPSPNGEPVAGLGKVFLK 532
Query: 1365 YAETESSNRARNGMNGRKFGGNEVVAVFYPEDKFEQGDY 1481
YA+T+ S RAR GMNGRKFGGNEVVAV+YPEDKFEQGDY
Sbjct: 533 YADTDGSTRARFGMNGRKFGGNEVVAVYYPEDKFEQGDY 571
>sp|Q9ZR39|U2A2A_NICPL Splicing factor U2af large subunit A OS=Nicotiana
plumbaginifolia GN=U2AF65A PE=2 SV=1
Length = 555
Score = 357 bits (914), Expect = 2e-097
Identities = 196/282 (69%), Positives = 217/282 (76%), Gaps = 19/282 (6%)
Frame = +2
Query: 5 DRDGERIK-RHDDREDDRRSRDRDRHHRSRHRDRSGER---RDRVRGDDDYRRSSRDRDF 172
DR ER K RH DR+ + +DRDRHHR RHRDRS R R R R +DD RS RD+
Sbjct: 62 DRVKERDKDRHRDRDGE---KDRDRHHRDRHRDRSDRRERERTRDRDEDDLHRS---RDY 115
Query: 173 DRRRDSDRDRGGDRRRRRSRSRGRSER----RSRSPSKTKRVSGFDMAPPAAGMLDAGAA 340
DRRRD+D+DR DRRR R SRGRSE RSRSPSK+KR+SGFDMAPP +L
Sbjct: 116 DRRRDNDKDR-EDRRRHRPSSRGRSEHRSKSRSRSPSKSKRISGFDMAPPTTALLPGATD 174
Query: 341 LTGQVPAPIPNLLPG--NGMFPLQPGQQFGGVPMMPIQAMTQQATRHARRVYVGGLSPSA 514
GQVP P +PG + MFPL QFG +PMMP+QAMTQQATRHARRVYVGGL P+A
Sbjct: 175 AAGQVPGTNP-AIPGLFSNMFPL-ASSQFGALPMMPVQAMTQQATRHARRVYVGGLPPTA 232
Query: 515 NEQSVATFFSQAMAAIGGNSAGPGDAVVNVYINYEKKFAFVEMRSVQEASNAMTLDGIIF 694
NEQSVATFFS M AIGGN+AGPGDAVVNVYIN+EKKFAFVEMRSV+EASNAM LDG+IF
Sbjct: 233 NEQSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIF 292
Query: 695 EGAPVKVRRPSDYNPALAATLGPSQPIPNLNLAAVGLTPGGA 820
EG PVKVRRPSDYNP+LAATLGPSQP PNLNLAAVG TPG +
Sbjct: 293 EGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGSTPGSS 334
Score = 327 bits (838), Expect = 1e-088
Identities = 159/219 (72%), Positives = 184/219 (84%), Gaps = 2/219 (0%)
Frame = +3
Query: 825 LEGPDRLFVGGLPYYIPESQIRELLESLGALKGFDLVRDRETGNSKGYAFCAYQDPAATD 1004
LEGPDR+FVGGLPYY ESQIRELLES G L+GFDLV+DRETGNSKGYAFC YQD + TD
Sbjct: 337 LEGPDRIFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTD 396
Query: 1005 IACAALNGITMGDKTLCVRRANQGTAQTKPEQENVLLHAQQQVAFQKIMLQQGAAAAATK 1184
IACAALNGI MGDKTL VRRANQGT Q PEQE+VLLHAQQQ+A Q+ MLQ G A ATK
Sbjct: 397 IACAALNGIKMGDKTLTVRRANQGTTQPNPEQESVLLHAQQQIALQRFMLQPG--ALATK 454
Query: 1185 VVCLTQVVTEDELRNDEEYEDIVVDMRDEGGKLGALTKVVIPRPSSSGEPVQGVGKVFLE 1364
V+CLT+VVT DEL +D++Y+DI+ DMR E K GAL VVIPRP+ +G P G+GKVFLE
Sbjct: 455 VLCLTEVVTVDELNDDDDYQDILEDMRTECEKFGALVNVVIPRPNPNGVPTPGLGKVFLE 514
Query: 1365 YAETESSNRARNGMNGRKFGGNEVVAVFYPEDKFEQGDY 1481
YA+ + S++AR G+NGRKFGGN+VVAVFYPE+KF +GDY
Sbjct: 515 YADVDGSSKARQGLNGRKFGGNQVVAVFYPENKFSEGDY 553
>sp|Q9ZR40|U2A2B_NICPL Splicing factor U2af large subunit B OS=Nicotiana
plumbaginifolia GN=U2AF65B PE=2 SV=1
Length = 573
Score = 351 bits (899), Expect = 1e-095
Identities = 197/284 (69%), Positives = 216/284 (76%), Gaps = 23/284 (8%)
Frame = +2
Query: 2 RDRDGERIKRHDDREDDR-RSRDRDRHHRSRHRDRSGER---RDRVRGDDDYRRSSRDRD 169
RDRD R DR+ DR R +DRDRHH RHRDRS R R R R DDD R+ RD
Sbjct: 81 RDRD-----RGRDRDKDREREKDRDRHHGDRHRDRSDRREKERTRDRDDDDRHRT---RD 132
Query: 170 FDRRRDSDRDRGGDRRRRRSRSRGRSER----RSRSPSKTKRVSGFDMAPPAAGMLDAGA 337
+D++R+ +DR R R RSRSRGRSE RSRS SK+KR+SGFDMAPP + ML
Sbjct: 133 YDQQREHAKDR-ESRHRHRSRSRGRSEHRSRSRSRSRSKSKRISGFDMAPPTSAMLPGIT 191
Query: 338 ALTGQVPA---PIPNLLPGNGMFPLQPGQQFGGVPMMPIQAMTQQATRHARRVYVGGLSP 508
A GQVP PIP + P MFPL G QFG +P+MPIQAMTQQATRHARRVYVGGL
Sbjct: 192 AAAGQVPGTNPPIPGMFP--NMFPLASG-QFGALPVMPIQAMTQQATRHARRVYVGGLPA 248
Query: 509 SANEQSVATFFSQAMAAIGGNSAGPGDAVVNVYINYEKKFAFVEMRSVQEASNAMTLDGI 688
ANEQSVATFFS M+AIGGN+AGPGDAVVNVYINYEKKFAFVEMRSV+EASNAM LDGI
Sbjct: 249 HANEQSVATFFSHVMSAIGGNTAGPGDAVVNVYINYEKKFAFVEMRSVEEASNAMALDGI 308
Query: 689 IFEGAPVKVRRPSDYNPALAATLGPSQPIPNLNLAAVGLTPGGA 820
IFEGAP KVRRPSDYNP+LAATLGPSQP PNLNLAAVGL+PG A
Sbjct: 309 IFEGAPCKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLSPGSA 352
Score = 328 bits (839), Expect = 1e-088
Identities = 159/219 (72%), Positives = 186/219 (84%), Gaps = 2/219 (0%)
Frame = +3
Query: 825 LEGPDRLFVGGLPYYIPESQIRELLESLGALKGFDLVRDRETGNSKGYAFCAYQDPAATD 1004
LEGPDR+FVGGLPYY E+QIRELLES G L+GFDLV+DRETGNSKGYAFC YQD + TD
Sbjct: 355 LEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDVSVTD 414
Query: 1005 IACAALNGITMGDKTLCVRRANQGTAQTKPEQENVLLHAQQQVAFQKIMLQQGAAAAATK 1184
IACAALNGI MGDKTL VRRANQGT Q KPEQE+VLLHAQQQ+A Q++MLQ A ATK
Sbjct: 415 IACAALNGIKMGDKTLTVRRANQGTTQPKPEQESVLLHAQQQIALQRLMLQ--PATLATK 472
Query: 1185 VVCLTQVVTEDELRNDEEYEDIVVDMRDEGGKLGALTKVVIPRPSSSGEPVQGVGKVFLE 1364
V+ LT+V++ DEL +DE+Y+DI+ DMR E GK G+L VVIPRPS +GEP GVGKVFLE
Sbjct: 473 VLSLTEVISADELNDDEDYQDILEDMRTECGKFGSLVNVVIPRPSPNGEPTPGVGKVFLE 532
Query: 1365 YAETESSNRARNGMNGRKFGGNEVVAVFYPEDKFEQGDY 1481
YA+ +SS++AR +NGRKFGGN+VVAVFYPE+KF +GDY
Sbjct: 533 YADVDSSSKARQSLNGRKFGGNQVVAVFYPENKFYEGDY 571
>sp|Q8L716|U2A2B_ARATH Splicing factor U2af large subunit B OS=Arabidopsis
thaliana GN=U2AF65B PE=2 SV=2
Length = 589
Score = 334 bits (855), Expect = 1e-090
Identities = 188/275 (68%), Positives = 209/275 (76%), Gaps = 26/275 (9%)
Frame = +2
Query: 56 RSRDRDRHHRSRHRDRSGERRD-RVRGDDDYRRSSRDRDFDRRRDSDRDRG-GDRRRRRS 229
+ R RDRHHR RHRDRS ER + R DDD+ R SRDR DRRR DRDR RRR RS
Sbjct: 96 KDRQRDRHHRDRHRDRSRERSEKRDDLDDDHHRRSRDR--DRRRSRDRDREVRHRRRSRS 153
Query: 230 RSRGRSERRSRSP----------------SKTKRVSGFDMAPPAAGMLDAGA-ALTGQVP 358
RSR RSERRSRS SK+KR SGFDMAPP ML A A A GQVP
Sbjct: 154 RSRSRSERRSRSEHRHKSEHRSRSRSRSRSKSKRRSGFDMAPP--DMLAATAVAAAGQVP 211
Query: 359 A-PIPNLLPG--NGMFPLQPGQQFGGVPMMPIQAMTQQATRHARRVYVGGLSPSANEQSV 529
+ P +PG + MFP+ PGQQ G +P++P+QAMTQQATRHARRVYVGGL P+ANEQSV
Sbjct: 212 SVPTTATIPGMFSNMFPMVPGQQLGALPVLPVQAMTQQATRHARRVYVGGLPPTANEQSV 271
Query: 530 ATFFSQAMAAIGGNSAGPGDAVVNVYINYEKKFAFVEMRSVQEASNAMTLDGIIFEGAPV 709
+TFFSQ M+AIGGN+AGPGDAVVNVYIN+EKKFAFVEMRSV+EASNAM LDGII EG PV
Sbjct: 272 STFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIILEGVPV 331
Query: 710 KVRRPSDYNPALAATLGPSQPIPNLNLAAVGLTPG 814
KVRRP+DYNP+LAATLGPSQP PNLNL AVGL+ G
Sbjct: 332 KVRRPTDYNPSLAATLGPSQPNPNLNLGAVGLSSG 366
Score = 325 bits (831), Expect = 9e-088
Identities = 157/219 (71%), Positives = 181/219 (82%), Gaps = 2/219 (0%)
Frame = +3
Query: 825 LEGPDRLFVGGLPYYIPESQIRELLESLGALKGFDLVRDRETGNSKGYAFCAYQDPAATD 1004
LEGPDR+FVGGLPYY E QIRELLES G L+GF+LV+DRETGNSKGYAFC YQDP+ TD
Sbjct: 371 LEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSVTD 430
Query: 1005 IACAALNGITMGDKTLCVRRANQGTAQTKPEQENVLLHAQQQVAFQKIMLQQGAAAAATK 1184
IACAALNGI MGDKTL VRRA QG Q KPEQE VLL+AQQQ+A Q++M Q G TK
Sbjct: 431 IACAALNGIKMGDKTLTVRRAIQGAIQPKPEQEEVLLYAQQQIALQRLMFQPG--GTPTK 488
Query: 1185 VVCLTQVVTEDELRNDEEYEDIVVDMRDEGGKLGALTKVVIPRPSSSGEPVQGVGKVFLE 1364
+VCLTQVVT D+LR+DEEY +I+ DMR EGGK G L VVIPRP+ +P GVGKVFLE
Sbjct: 489 IVCLTQVVTADDLRDDEEYAEIMEDMRQEGGKFGNLVNVVIPRPNPDHDPTPGVGKVFLE 548
Query: 1365 YAETESSNRARNGMNGRKFGGNEVVAVFYPEDKFEQGDY 1481
YA+ + S++AR+GMNGRKFGGN+VVAV+YPEDK+ QGDY
Sbjct: 549 YADVDGSSKARSGMNGRKFGGNQVVAVYYPEDKYAQGDY 587
>sp|Q2R0Q1|U2A2A_ORYSJ Splicing factor U2af large subunit A OS=Oryza sativa
subsp. japonica GN=U2AF65A PE=2 SV=2
Length = 574
Score = 329 bits (843), Expect = 4e-089
Identities = 159/219 (72%), Positives = 181/219 (82%)
Frame = +3
Query: 825 LEGPDRLFVGGLPYYIPESQIRELLESLGALKGFDLVRDRETGNSKGYAFCAYQDPAATD 1004
LEGPDR+FVGGLPYY E+Q+RELLES G L+GFDLV+DRETGNSKGYAFC YQD TD
Sbjct: 354 LEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 413
Query: 1005 IACAALNGITMGDKTLCVRRANQGTAQTKPEQENVLLHAQQQVAFQKIMLQQGAAAAATK 1184
IACAALNGI MGDKTL VRRANQG +Q +PEQE++LLH QQQ QK+M Q G A TK
Sbjct: 414 IACAALNGIKMGDKTLTVRRANQGASQPRPEQESMLLHVQQQAQMQKLMFQVGGGALPTK 473
Query: 1185 VVCLTQVVTEDELRNDEEYEDIVVDMRDEGGKLGALTKVVIPRPSSSGEPVQGVGKVFLE 1364
VVCLTQVV+ DELR+DEEYEDIV DMR+EG + G L KVVIPRP SG PV GVG+VFLE
Sbjct: 474 VVCLTQVVSPDELRDDEEYEDIVQDMREEGCRYGNLVKVVIPRPDPSGAPVAGVGRVFLE 533
Query: 1365 YAETESSNRARNGMNGRKFGGNEVVAVFYPEDKFEQGDY 1481
+A+ ESS +A+NGM+GRKF N+VVAVFYPEDKF +G Y
Sbjct: 534 FADVESSTKAKNGMHGRKFANNQVVAVFYPEDKFAEGQY 572
Score = 300 bits (766), Expect = 3e-080
Identities = 174/283 (61%), Positives = 197/283 (69%), Gaps = 22/283 (7%)
Frame = +2
Query: 2 RDRDGERIKRHDDREDDRRSRDRDRHHRSRHRDRSGERRDRVRGDDDYRRSSRDRDFDRR 181
RDRD +R +R DR D + RDRDRH R R E DR R DD RR R D +RR
Sbjct: 81 RDRDRDRDRRDRDRGD--KDRDRDRHREHRDRSERREHHDRERSDDRDRR--RGHDSERR 136
Query: 182 RDSDRDRGGDRRRRRSRSRGRS---ERRSRSPSK---TKRVSGFDMAPPAAGMLDAGAAL 343
RD DRD RR RSRSR S +RRSRS S+ +KRVSGFD P AA A A
Sbjct: 137 RDRDRD---GHRRHRSRSRSPSKGRDRRSRSRSRSRSSKRVSGFDQGPQAAIPALAAGAA 193
Query: 344 TGQVPAPIPNLLPGNGMFPLQPGQQFGGVPMMPI----QAMTQQATRHARRVYVGGLSPS 511
GQVP P + +GM P P P+ QAMTQQATRHARRVYVGGL P+
Sbjct: 194 PGQVPVVAPAI---SGMLPNM--FNLTQTPFTPLVIQPQAMTQQATRHARRVYVGGLPPT 248
Query: 512 ANEQSVATFFSQAMAAIGGNSAGPGDAVVNVYINYEKKFAFVEMRSVQEASNAMTLDGII 691
ANE +VA +F+Q MAA+GGN+AGPGDAV+NVYIN++KKFAFVEMRSV+EASNAM LDGI+
Sbjct: 249 ANEHTVAVYFNQVMAAVGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGIM 308
Query: 692 FEGAPVKVRRPSDYNPALAATLGPSQPIPNLNLAAVGLTPGGA 820
FEGAPVKVRRP+DYNP+LAA LGPSQP PNLNLAAVGLTPG A
Sbjct: 309 FEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLAAVGLTPGSA 351
>sp|Q2QKB4|U2A2B_WHEAT Splicing factor U2af large subunit B OS=Triticum aestivum
GN=U2AF65B PE=2 SV=1
Length = 543
Score = 324 bits (828), Expect = 2e-087
Identities = 161/219 (73%), Positives = 180/219 (82%), Gaps = 2/219 (0%)
Frame = +3
Query: 825 LEGPDRLFVGGLPYYIPESQIRELLESLGALKGFDLVRDRETGNSKGYAFCAYQDPAATD 1004
LEGPDR+FVGGLPYY E+Q+RELLES G L+GFDLV+DRETGNSKGYAFC YQD TD
Sbjct: 323 LEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 382
Query: 1005 IACAALNGITMGDKTLCVRRANQGTAQTKPEQENVLLHAQQQVAFQKIMLQQGAAAAATK 1184
IACAALNGI MGDKTL VRRANQG+AQ +PEQEN+LL AQQQV QK++ Q G A TK
Sbjct: 383 IACAALNGIKMGDKTLTVRRANQGSAQPRPEQENILLQAQQQVQLQKLVYQVG--ALPTK 440
Query: 1185 VVCLTQVVTEDELRNDEEYEDIVVDMRDEGGKLGALTKVVIPRPSSSGEPVQGVGKVFLE 1364
VVCLTQVVT DEL++DEEYEDI+ DMR E GK G L KVVIPRP SGEPV GVGKVFLE
Sbjct: 441 VVCLTQVVTADELKDDEEYEDIMEDMRLEAGKYGNLVKVVIPRPHPSGEPVSGVGKVFLE 500
Query: 1365 YAETESSNRARNGMNGRKFGGNEVVAVFYPEDKFEQGDY 1481
YA+ + S +A+ M+GRKFGGN VVAVFYPE+KF DY
Sbjct: 501 YADVDGSTKAKTAMHGRKFGGNPVVAVFYPENKFADEDY 539
Score = 304 bits (778), Expect = 1e-081
Identities = 180/283 (63%), Positives = 205/283 (72%), Gaps = 26/283 (9%)
Frame = +2
Query: 2 RDRDGERIKRHDDREDDRRSRDRDRHHRSRHRDRSGERRDRVRGDDDYRRSSRDRDFDRR 181
R RD +R + D +D R +DRDRH R HRD+ E RDR DD+ R R RD +RR
Sbjct: 54 RGRDRDRGRDRDLDKDRDRDKDRDRHQR-HHRDKR-EHRDR---PDDHDR-HRSRDSERR 107
Query: 182 RDSDRDRGGDRRRR---RSRSRGRSERRSRSPSKTKRVSGFDMAPPAAGMLDAGAALTGQ 352
RD +RD G RR R RSRSRGR + RSRS SK+KRVSGFD+ P A +L Q
Sbjct: 108 RDRERD--GHRRHRSRSRSRSRGRDDHRSRSHSKSKRVSGFDLGPTAQSVLP-------Q 158
Query: 353 VPA-PIPNLLPGN---GMFPLQ---PGQQFGGVPMMPIQAMTQQATRHARRVYVGGLSPS 511
P P P+ LPG+ GMFP Q + M P QAMTQQATRHARRVYVGGL PS
Sbjct: 159 FPTIPTPSQLPGSSIPGMFPNMLPFADGQINPLVMQP-QAMTQQATRHARRVYVGGLPPS 217
Query: 512 ANEQSVATFFSQAMAAIGGNSAGPGDAVVNVYINYEKKFAFVEMRSVQEASNAMTLDGII 691
ANEQSVA +F+Q MAAIGGN+AGPGDAV+NVYIN++KKFAFVEMRSV+EASNAM LDGI+
Sbjct: 218 ANEQSVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGIL 277
Query: 692 FEGAPVKVRRPSDYNPALAATLGPSQPIPNLNLAAVGLTPGGA 820
FEGAPVKVRRP+DYNP+LAA LGPSQP NLNLAAVGLTPG A
Sbjct: 278 FEGAPVKVRRPTDYNPSLAAALGPSQPSSNLNLAAVGLTPGSA 320
>sp|Q2QZL4|U2A2B_ORYSJ Splicing factor U2af large subunit B OS=Oryza sativa
subsp. japonica GN=U2AF65B PE=2 SV=2
Length = 548
Score = 316 bits (809), Expect = 3e-085
Identities = 190/286 (66%), Positives = 214/286 (74%), Gaps = 27/286 (9%)
Frame = +2
Query: 2 RDRDGERIKRHD-DREDDR---RSRDRDRHHRSRHRDRSGERRDRVRGDDDYRRSSRDRD 169
RDRD ++ K D D+E DR R +DRDRHHR HR+R E RDR DD+ R R RD
Sbjct: 56 RDRDRDKDKEKDRDKERDRDRDRDKDRDRHHR-HHRERR-EHRDR---SDDHDR-HRSRD 109
Query: 170 FDRRRDSDRD-RGGDRRRRRSRSRGRSER-RSRSPSKTKRVSGFDMAPPAAGMLDAGAAL 343
+RRRD +RD R R R RSRSRGR R RSRS SK+KRVSGFDMAPPA A+
Sbjct: 110 SERRRDHERDGRRRHRSRSRSRSRGRDRRSRSRSRSKSKRVSGFDMAPPA-------QAV 162
Query: 344 TGQVPA-PIPNLLPGN---GMFP--LQPG-QQFGGVPMMPIQAMTQQATRHARRVYVGGL 502
Q PA P P+ PG GMFP L G QF + + P QAMTQQATRHARRVYVGGL
Sbjct: 163 VPQFPAIPTPSQFPGTAIPGMFPNMLPMGVGQFNPLVIQP-QAMTQQATRHARRVYVGGL 221
Query: 503 SPSANEQSVATFFSQAMAAIGGNSAGPGDAVVNVYINYEKKFAFVEMRSVQEASNAMTLD 682
P+ANEQSVA +F+Q MAAIGGN+AGPGDAV+NVYIN++KKFAFVEMRSV+EASNAM LD
Sbjct: 222 PPTANEQSVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALD 281
Query: 683 GIIFEGAPVKVRRPSDYNPALAATLGPSQPIPNLNLAAVGLTPGGA 820
GI+FEGAPVKVRRP+DYNP+LAA LGPSQP PNLNLAAVGLTPG A
Sbjct: 282 GILFEGAPVKVRRPTDYNPSLAAALGPSQPSPNLNLAAVGLTPGSA 327
Score = 315 bits (805), Expect = 9e-085
Identities = 156/219 (71%), Positives = 178/219 (81%), Gaps = 2/219 (0%)
Frame = +3
Query: 825 LEGPDRLFVGGLPYYIPESQIRELLESLGALKGFDLVRDRETGNSKGYAFCAYQDPAATD 1004
LEGPDR+FVGGLPYY E+Q+RELLES G L+GFDLV+DRETGNSKGYAFC YQD TD
Sbjct: 330 LEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTD 389
Query: 1005 IACAALNGITMGDKTLCVRRANQGTAQTKPEQENVLLHAQQQVAFQKIMLQQGAAAAATK 1184
IACAALNGI MGDKTL VRRANQG AQ +PEQE++LL AQQQV QK++ Q G A TK
Sbjct: 390 IACAALNGIKMGDKTLTVRRANQGAAQPRPEQESILLQAQQQVQLQKLVYQVG--ALPTK 447
Query: 1185 VVCLTQVVTEDELRNDEEYEDIVVDMRDEGGKLGALTKVVIPRPSSSGEPVQGVGKVFLE 1364
VVCLTQVV+ DEL++DEEYEDI+ DMR E GK G L KVVIPRP SG PV GVGKVFLE
Sbjct: 448 VVCLTQVVSADELKDDEEYEDIMEDMRLEAGKYGNLIKVVIPRPDPSGLPVAGVGKVFLE 507
Query: 1365 YAETESSNRARNGMNGRKFGGNEVVAVFYPEDKFEQGDY 1481
YA+ + + +A+ M+GRKFGGN VVAVFYPE+KF +Y
Sbjct: 508 YADVDGATKAKTAMHGRKFGGNPVVAVFYPENKFSSAEY 546
>sp|Q2QKB3|U2A2A_WHEAT Splicing factor U2af large subunit A OS=Triticum aestivum
GN=U2AF65A PE=2 SV=1
Length = 591
Score = 274 bits (700), Expect = 1e-072
Identities = 165/273 (60%), Positives = 189/273 (69%), Gaps = 22/273 (8%)
Frame = +2
Query: 8 RDGERIKRHDDREDDRRSRDRDRHHRSRHRDRSGERRDRVRGDD-DYRRSSRDRDFDRRR 184
R+G R + R+ SRDR+RHHR HR+RS R R R DD DYRRS DRD +RR
Sbjct: 129 REGSRDRERHHRDHREGSRDRERHHRD-HRERSERREHRDRSDDRDYRRSC-DRDAERR- 185
Query: 185 DSDRDRGGDRRRRRSRSRGRSERRSRSPSKTKRVSGFDMAPPAAGML---DAGAALTGQV 355
DRDR G RR RSRS RSE S++KR+SGFD P A + DA + ++
Sbjct: 186 --DRDRDG-HRRHRSRSPLRSE------SQSKRMSGFDQRPSEAIPILAPDATPSQLPEL 236
Query: 356 PAPIPNLLPGNGMFPLQPGQQFGGVPMMPIQAMTQQATRHARRVYVGGLSPSANEQSVAT 535
PA P + P M P G P+ AMTQQATRHARRVYVGGL P ANEQ+VA
Sbjct: 237 PAANPGMFP--NMLPNLVNVPALGQPL----AMTQQATRHARRVYVGGLPPIANEQTVAV 290
Query: 536 FFSQAMAAIGGNSAGPGDAVVNVYINYEKKFAFVEMRSVQEASNAMTLDGIIFEGAPVKV 715
FF+Q MAAIGGN+ G AVVNVYIN++KKFAFVEMRSV+EASNAM LDGI+FEGAPVKV
Sbjct: 291 FFNQVMAAIGGNTFALGHAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKV 350
Query: 716 RRPSDYNPALAATLGPSQPIPNLNLAAVGLTPG 814
RRP+DYNP+ AA LGPSQP PNLNLAAVGLTPG
Sbjct: 351 RRPTDYNPSQAAALGPSQPNPNLNLAAVGLTPG 383
Score = 204 bits (517), Expect = 2e-051
Identities = 99/152 (65%), Positives = 123/152 (80%), Gaps = 2/152 (1%)
Frame = +3
Query: 825 LEGPDRLFVGGLPYYIPESQIRELLESLGALKGFDLVRDRETGNSKGYAFCAYQDPAATD 1004
LEGPDR+FVGGLPYY E+Q+RELLE+ G L+GFD+V+D+ETGNSKGYAFC Y+D TD
Sbjct: 388 LEGPDRIFVGGLPYYFTEAQVRELLETFGPLRGFDIVKDKETGNSKGYAFCLYKDGTVTD 447
Query: 1005 IACAALNGITMGDKTLCVRRANQGTAQTKPEQENVLLHAQQQVAFQKIMLQQGAAAAATK 1184
IACAALNGI +GD+TL VRRANQG A+ +PEQEN+LL AQQ+ ++++ + G TK
Sbjct: 448 IACAALNGIQLGDRTLTVRRANQG-AEPRPEQENILLQAQQEAQMKRLVYEVG-RTLTTK 505
Query: 1185 VVCLTQVVTEDELRNDEEYEDIVVDMRDEGGK 1280
VVCLTQVV+ D+LR+DEEY DI+ DM EG K
Sbjct: 506 VVCLTQVVSADDLRDDEEYNDILEDMTLEGHK 537
>sp|P26368|U2AF2_HUMAN Splicing factor U2AF 65 kDa subunit OS=Homo sapiens
GN=U2AF2 PE=1 SV=4
Length = 475
Score = 167 bits (421), Expect = 3e-040
Identities = 97/230 (42%), Positives = 130/230 (56%), Gaps = 10/230 (4%)
Frame = +3
Query: 813 GVLSLEGPD---RLFVGGLPYYIPESQIRELLESLGALKGFDLVRDRETGNSKGYAFCAY 983
GV+S PD +LF+GGLP Y+ + Q++ELL S G LK F+LV+D TG SKGYAFC Y
Sbjct: 248 GVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEY 307
Query: 984 QDPAATDIACAALNGITMGDKTLCVRRANQG----TAQTKPEQENVLLHAQQQVAFQKIM 1151
D TD A A LNG+ +GDK L V+RA+ G T + P N Q
Sbjct: 308 VDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLVSPPSTINQTPVTLQVPGLMSSQ 367
Query: 1152 LQQGAAAAATKVVCLTQVVTEDELRNDEEYEDIVVDMRDEGGKLGALTKVVIPRPSSSGE 1331
+Q G T+V+CL +V +EL +DEEYE+IV D+RDE K G + + IPRP G
Sbjct: 368 VQMG--GHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRP-VDGV 424
Query: 1332 PVQGVGKVFLEYAETESSNRARNGMNGRKFGGNEVVAVFYPEDKFEQGDY 1481
V G GK+F+E+ +A G+ GRKF VV + D + + D+
Sbjct: 425 EVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 474
Score = 131 bits (327), Expect = 2e-029
Identities = 93/258 (36%), Positives = 132/258 (51%), Gaps = 33/258 (12%)
Frame = +2
Query: 47 DDRRSRDRDRHHRSRHRDRSGERRDRVRGDDDYRRSSRDRDFDRRRDSDRDRGGDRRRRR 226
++++ RD++ HR R RS RDR R R SRDR +R + RDR RRR +
Sbjct: 13 ENKQERDKENRHRKRSHSRS-RSRDRKR-----RSRSRDRRNRDQRSASRDR---RRRSK 63
Query: 227 SRSRGRSERRS---RSP--SKTKRVSGF-DMAPPA----AGMLDAGAALTGQVPAP--IP 370
+RG E RSP K K+V + D+ PP M GQ+PA +P
Sbjct: 64 PLTRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIPATALLP 123
Query: 371 NLLPGNGMFPLQPGQQFGGVPMMPIQAMTQQATRHARRVYVGGLSPSANEQSVATFFSQA 550
+ P +G+ V P+ + Q TR ARR+YVG + E+++ FF+ A
Sbjct: 124 TMTP-DGL----------AVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFN-A 171
Query: 551 MAAIGGNSAGPGDAVVNVYINYEKKFAFVEMRSVQEASNAMTLDGIIFEGAPVKVRRPSD 730
+GG + PG+ V+ V IN +K FAF+E RSV E + AM DGIIF+G +K+RRP D
Sbjct: 172 QMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHD 231
Query: 731 YNPALAATLGPSQPIPNL 784
Y P + PS +P +
Sbjct: 232 YQPLPGMSENPSVYVPGV 249
>sp|P26369|U2AF2_MOUSE Splicing factor U2AF 65 kDa subunit OS=Mus musculus
GN=U2af2 PE=1 SV=3
Length = 475
Score = 166 bits (420), Expect = 4e-040
Identities = 97/230 (42%), Positives = 130/230 (56%), Gaps = 10/230 (4%)
Frame = +3
Query: 813 GVLSLEGPD---RLFVGGLPYYIPESQIRELLESLGALKGFDLVRDRETGNSKGYAFCAY 983
GV+S PD +LF+GGLP Y+ + Q++ELL S G LK F+LV+D TG SKGYAFC Y
Sbjct: 248 GVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEY 307
Query: 984 QDPAATDIACAALNGITMGDKTLCVRRANQG----TAQTKPEQENVLLHAQQQVAFQKIM 1151
D TD A A LNG+ +GDK L V+RA+ G T + P N Q
Sbjct: 308 VDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLVSLPSTINQTPVTLQVPGLMSSQ 367
Query: 1152 LQQGAAAAATKVVCLTQVVTEDELRNDEEYEDIVVDMRDEGGKLGALTKVVIPRPSSSGE 1331
+Q G T+V+CL +V +EL +DEEYE+IV D+RDE K G + + IPRP G
Sbjct: 368 VQMG--GHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRP-VDGV 424
Query: 1332 PVQGVGKVFLEYAETESSNRARNGMNGRKFGGNEVVAVFYPEDKFEQGDY 1481
V G GK+F+E+ +A G+ GRKF VV + D + + D+
Sbjct: 425 EVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 474
>sp|Q24562|U2AF2_DROME Splicing factor U2AF 50 kDa subunit OS=Drosophila
melanogaster GN=U2af50 PE=1 SV=1
Length = 416
Score = 165 bits (417), Expect = 9e-040
Identities = 93/221 (42%), Positives = 132/221 (59%), Gaps = 8/221 (3%)
Frame = +3
Query: 813 GVLSL---EGPDRLFVGGLPYYIPESQIRELLESLGALKGFDLVRDRETGNSKGYAFCAY 983
GV+S + P ++F+GGLP Y+ + Q++ELL S G L+ F+LV+D TG SKGYAFC Y
Sbjct: 196 GVISTVVPDSPHKIFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLSKGYAFCEY 255
Query: 984 QDPAATDIACAALNGITMGDKTLCVRRANQGTAQTKPEQENVLLHAQQQVAFQKIMLQQG 1163
D + TD + A LNG+ +GDK L V+RA+ G A+ N QV ++ G
Sbjct: 256 VDLSITDQSIAGLNGMQLGDKKLIVQRASVG-AKNAQNAANTTQSVMLQVPGLSNVVTSG 314
Query: 1164 AAAAATKVVCLTQVVTEDELRNDEEYEDIVVDMRDEGGKLGALTKVVIPRPSSSGEPVQG 1343
T+V+CL +VT DELR++EEYEDI+ D+++E K G + V IPRP G V G
Sbjct: 315 ---PPTEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKYGVVRSVEIPRP-IEGVEVPG 370
Query: 1344 VGKVFLEYAETESSNRARNGMNGRKFGGNEVVAVFYPEDKF 1466
GKVF+E+ +A+ + GRKF VV ++ DK+
Sbjct: 371 CGKVFVEFNSVLDCQKAQQALTGRKFSDRVVVTSYFDPDKY 411
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,733,448,049
Number of Sequences: 518415
Number of Extensions: 32733448049
Number of Successful Extensions: 231167770
Number of sequences better than 0.0: 0
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