BLASTX 7.6.2
Query= UN08126 /QuerySize=1530
(1529 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P51991|ROA3_HUMAN Heterogeneous nuclear ribonucleoprotein A3 ... 186 5e-046
sp|Q96EP5|DAZP1_HUMAN DAZ-associated protein 1 OS=Homo sapiens G... 178 1e-043
sp|Q9JII5|DAZP1_MOUSE DAZ-associated protein 1 OS=Mus musculus G... 178 1e-043
sp|Q98SJ2|DAZP1_XENLA DAZ-associated protein 1 OS=Xenopus laevis... 178 1e-043
sp|P48810|RB87F_DROME Heterogeneous nuclear ribonucleoprotein 87... 136 4e-031
sp|P21522|ROA1_SCHAM Heterogeneous nuclear ribonucleoprotein A1,... 135 1e-030
sp|Q8BG05|ROA3_MOUSE Heterogeneous nuclear ribonucleoprotein A3 ... 132 6e-030
sp|Q6URK4|ROA3_RAT Heterogeneous nuclear ribonucleoprotein A3 OS... 132 6e-030
sp|Q13151|ROA0_HUMAN Heterogeneous nuclear ribonucleoprotein A0 ... 126 4e-028
sp|P07909|ROA1_DROME Heterogeneous nuclear ribonucleoprotein A1 ... 113 5e-024
sp|Q96DH6|MSI2H_HUMAN RNA-binding protein Musashi homolog 2 OS=H... 111 2e-023
sp|Q9VVE5|MSIR6_DROME RNA-binding protein Musashi homolog Rbp6 O... 107 3e-022
sp|P48809|RB27C_DROME Heterogeneous nuclear ribonucleoprotein 27... 103 4e-021
sp|Q920Q6|MSI2H_MOUSE RNA-binding protein Musashi homolog 2 OS=M... 100 3e-020
sp|O43347|MSI1H_HUMAN RNA-binding protein Musashi homolog 1 OS=H... 98 2e-019
sp|Q61474|MSI1H_MOUSE RNA-binding protein Musashi homolog 1 OS=M... 97 2e-019
sp|Q8K3P4|MSI1H_RAT RNA-binding protein Musashi homolog 1 OS=Rat... 97 2e-019
sp|O94432|YHKF_SCHPO Uncharacterized RNA-binding protein C660.15... 97 2e-019
sp|Q99383|HRP1_YEAST Nuclear polyadenylated RNA-binding protein ... 94 2e-018
>sp|P51991|ROA3_HUMAN Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens
GN=HNRNPA3 PE=1 SV=2
Length = 378
Score = 186 bits (471), Expect = 5e-046
Identities = 137/394 (34%), Positives = 186/394 (47%), Gaps = 59/394 (14%)
Frame = -3
Query: 1416 GSLGTKSMESDQ-GKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGFGLV 1240
G G E +Q KLFIGG+S++T ++ LRE+F +G ++ VMR+ T R RGFG V
Sbjct: 22 GEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 81
Query: 1239 SFSDPAVIDRVLQSK-HHIDNRDVDVKRAMSREEQSPGGGGGSRGGSFSGASRSFDSGGA 1063
++S +D + ++ H +D R V+ KRA+SRE+ GA
Sbjct: 82 TYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSV--------------------KPGA 121
Query: 1062 NVRTKKIFVGGLPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVD 883
++ KKIFVGG+ R YFE YG + +M D+ + + RGF FV+FD D+VD
Sbjct: 122 HLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVD 181
Query: 882 LVLHKTFHDLSGKQVEVKRALPK----DANPGVAGGGGRGGFPGYGGGSGEGRLDSSRYM 715
++ + +H ++G EVK+AL K A GGG G F G GG G G +
Sbjct: 182 KIVVQKYHTINGHNCEVKKALSKQEMQSAGSQRGRGGGSGNFMGRGGNFGGG---GGNFG 238
Query: 714 PPQNAGGSGYPPYGAGYGYGSNGVGYGGFGGYGNPSGTPYGNPGVPGAGFGSGPRSSWGG 535
N GG G G G GS G G GG+ G+G G+ G G G G R +GG
Sbjct: 239 RGGNFGGRGGYGGGGGGSRGSYGGGDGGYNGFG-------GDGGNYGGGPGYSSRGGYGG 291
Query: 534 QAPSGYGNVGYGNAAPWGGSGPGSAVMGQGVHLQLWRSSYGYGGMILLW------DSSGY 373
P GYGN G GG G G G +YG GG + S Y
Sbjct: 292 GGP-GYGNQG-------GGYGGGGGYDGYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNY 343
Query: 372 -----GAVGGRPNS--LGGGYAD--GSDGYGNHQ 298
G+ GGR + GGGY GS GYG+ +
Sbjct: 344 GPMKGGSFGGRSSGSPYGGGYGSGGGSGGYGSRR 377
>sp|Q96EP5|DAZP1_HUMAN DAZ-associated protein 1 OS=Homo sapiens GN=DAZAP1 PE=1
SV=1
Length = 407
Score = 178 bits (451), Expect = 1e-043
Identities = 118/316 (37%), Positives = 157/316 (49%), Gaps = 44/316 (13%)
Frame = -3
Query: 1380 GKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGFGLVSFSDPAVIDRVLQ 1201
GKLF+GG+ W T + LR YF+ YGEV +M++K T++ RGFG V F DP + VL
Sbjct: 10 GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69
Query: 1200 SK-HHIDNRDVDVK----RAMSREEQSPGGGGGSRGGSFSGASRSFDSGGANVRTKKIFV 1036
S+ H +D R++D K R M E P G + RS N ++ KIFV
Sbjct: 70 SRPHTLDGRNIDPKPCTPRGMQPERTRPKEG-------WQKGPRS-----DNSKSNKIFV 117
Query: 1035 GGLPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHD 856
GG+P E R YF+ +G V++ V++ D QRPRGFGF++F+ E SVD ++ FHD
Sbjct: 118 GGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHD 177
Query: 855 LSGKQVEVKRALPKDANPGVAGGGGRGGFPGYGGGSGEGRLDSSRYMPPQNAGGSGYPPY 676
+ GK+VEVKRA P+D+ + PG G S G SR +P G +G PP
Sbjct: 178 IMGKKVEVKRAEPRDS---------KSQAPGQPGASQWG----SRVVPNAANGWAGQPPP 224
Query: 675 GAGYGYGSNGV---GYGGFGGYGNP---SGTPYGNP-------GVPGAGFGSGPRSSWGG 535
GYG G+ GGYG P G P P P GF G
Sbjct: 225 TWQQGYGPQGMWVPAGQAIGGYGPPPAGRGAPPPPPPFTSYIVSTPPGGFPPPQGFPQGY 284
Query: 534 QAPSGYGNVGYGNAAP 487
AP + + GYG P
Sbjct: 285 GAPPQF-SFGYGPPPP 299
>sp|Q9JII5|DAZP1_MOUSE DAZ-associated protein 1 OS=Mus musculus GN=Dazap1 PE=2
SV=2
Length = 406
Score = 178 bits (451), Expect = 1e-043
Identities = 119/316 (37%), Positives = 157/316 (49%), Gaps = 44/316 (13%)
Frame = -3
Query: 1380 GKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGFGLVSFSDPAVIDRVLQ 1201
GKLF+GG+ W T + LR YF+ YGEV +M++K T++ RGFG V F DP + VL
Sbjct: 10 GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69
Query: 1200 SK-HHIDNRDVDVK----RAMSREEQSPGGGGGSRGGSFSGASRSFDSGGANVRTKKIFV 1036
S+ H +D R++D K R M E P G + G S +S+S KIFV
Sbjct: 70 SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW--QKGPRSDSSKS----------NKIFV 117
Query: 1035 GGLPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHD 856
GG+P E R YF+ +G V++ V++ D QRPRGFGF++F+ E SVD ++ FHD
Sbjct: 118 GGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHD 177
Query: 855 LSGKQVEVKRALPKDANPGVAGGGGRGGFPGYGGGSGEGRLDSSRYMPPQNAGGSGYPPY 676
+ GK+VEVKRA P+D+ + PG G S G SR P G +G PP
Sbjct: 178 IMGKKVEVKRAEPRDS---------KNQAPGQPGASQWG----SRVAPSAANGWAGQPPP 224
Query: 675 GAGYGYGSNGV---GYGGFGGYGNP---SGTPYGNP-------GVPGAGFGSGPRSSWGG 535
GYG G+ GGYG P G P P P GF G
Sbjct: 225 TWQQGYGPQGMWVPAGQAIGGYGPPPAGRGAPPPPPPFTSYIVSTPPGGFPPPQGFPQGY 284
Query: 534 QAPSGYGNVGYGNAAP 487
AP + + GYG P
Sbjct: 285 GAPPQF-SFGYGPPPP 299
>sp|Q98SJ2|DAZP1_XENLA DAZ-associated protein 1 OS=Xenopus laevis GN=dazap1 PE=1
SV=1
Length = 360
Score = 178 bits (450), Expect = 1e-043
Identities = 112/310 (36%), Positives = 152/310 (49%), Gaps = 30/310 (9%)
Frame = -3
Query: 1380 GKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGFGLVSFSDPAVIDRVLQ 1201
GKLF+GG+ W T + LR YF+ YGEV +M++K T++ RGFG V F DP + VL
Sbjct: 10 GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69
Query: 1200 SK-HHIDNRDVDVK----RAMSREEQSPGGGGGSRGGSFSGASRSFDSGGANVRTKKIFV 1036
S+ H +D R++D K R M E P G + + N R+ KIFV
Sbjct: 70 SRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQK-----------EPRTENSRSNKIFV 118
Query: 1035 GGLPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHD 856
GG+P E + YF +G V++ V++ D QRPRGFGF++F+ E SVD ++ FHD
Sbjct: 119 GGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHD 178
Query: 855 LSGKQVEVKRALPKDANPGVAGGGGRGGFPGYGGGSGEGRLDSSRYMPPQNAGGSGYPPY 676
+ GK+VEVKRA P+D+ G G +G + + + PPQ GY P
Sbjct: 179 IMGKKVEVKRAEPRDSKSQTPGPPGSN---QWGSRAMQSTANGWTGQPPQT--WQGYSPQ 233
Query: 675 GAGYGYGSNGVGYGGFGGYGNPSGTPYGNPGVPGAGFGSGPRSSWGGQAPSGYGNVGYGN 496
G G GYG G G P P P + G P P G+ GY
Sbjct: 234 GMWMPTGQTIGGYGQPAGRGGPPPPPSFAPFLVSTTPGPFP-------PPQGF-PPGYAT 285
Query: 495 AAPWG-GSGP 469
P+G G GP
Sbjct: 286 PPPFGYGYGP 295
>sp|P48810|RB87F_DROME Heterogeneous nuclear ribonucleoprotein 87F OS=Drosophila
melanogaster GN=Hrb87F PE=1 SV=2
Length = 385
Score = 136 bits (342), Expect = 4e-031
Identities = 96/290 (33%), Positives = 131/290 (45%), Gaps = 20/290 (6%)
Frame = -3
Query: 1086 RSFDSGGANVRTKKIFVGGLPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVS 907
+ DS A KK+FVGGL + R YF+ +G + I+ D+ T + RGF F+
Sbjct: 103 QEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIE 162
Query: 906 FDSEDSVDLVLHKTFHDLSGKQVEVKRALPKDANPGVAGGGGRGGFPGYGGGSGEG-RLD 730
FD D VD ++ + H + K ++VK+A+ K GGGGRGG P GG G+G R
Sbjct: 163 FDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDMDRQGGGGGRGG-PRAGGRGGQGDRGQ 221
Query: 729 SSRYMPPQNA--GGSGYPPYGAGYGYGSNGVGYGGFGGYGNPSGTPYGNPGVPGAGFGSG 556
QN GG + G G G+G++G +GG G G+ G G G
Sbjct: 222 GGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSGGWNQQGGSGGGPWNNQGG 281
Query: 555 PRSSWGGQAPSGYGNVGYGNAAPWGGSGPGSAVMGQGVHLQLWRSSYGYGGMILLWDSSG 376
W G GYG G + WGG+G G G G ++ SYG G +S
Sbjct: 282 GNGGWNGGGGGGYG--GGNSNGSWGGNGGGGG--GGGGFGNEYQQSYGGGPQ----RNSN 333
Query: 375 YGAVGGRPNSL---GGGYADGSDG-----YGNHQGNGQAGYGGGYGSGNQ 250
+G P S GGG+ G+ G GN+ G G GG G GN+
Sbjct: 334 FGNNRPAPYSQGGGGGGFNKGNQGGGQGFAGNNYNTGGGGQGGNMGGGNR 383
>sp|P21522|ROA1_SCHAM Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
OS=Schistocerca americana GN=HNRNP PE=2 SV=1
Length = 342
Score = 135 bits (338), Expect = 1e-030
Identities = 93/249 (37%), Positives = 116/249 (46%), Gaps = 23/249 (9%)
Frame = -3
Query: 1065 ANVRTKKIFVGGLPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSV 886
A KK+FVGG+ + ++ R YF+ YG V A I++D+ T++ RGF FV FD D V
Sbjct: 103 AGATVKKLFVGGIKEEMEENDLRDYFKQYGTVVSAAIVVDKETRKKRGFAFVEFDDYDPV 162
Query: 885 DLVLHKTFHDLSGKQVEVKRALPKDANPGVAGGGGRGGF-PGYGGGSGEGRLDSSRYMPP 709
D + H + GK ++VK+ALPK PG GGGGRGG G GGG G GR D
Sbjct: 163 DKICLSRNHQIRGKHIDVKKALPKGDAPGGRGGGGRGGVGGGAGGGWGGGRGDWG----- 217
Query: 708 QNAGGSGYPPYGAG----YGYGSNGVGYGGFGGYGNPSGTPYGNPGVPGAGFGSGPRSSW 541
+AGG G +G G G G +GG GG G G +G G G G G R
Sbjct: 218 GSAGGGGGGGWGGADPWENGRGGGGDRWGG-GGGGMGGGDRWGG----GGGMGGGDRYGG 272
Query: 540 GGQAPSGYGNVGYGNAAPWGGSGPGSAVMGQGVHLQLWRSSYGYGGMILLWD-------S 382
GG G+ N GY N+ P G G S YG D
Sbjct: 273 GGGRSGGWSNDGY-NSGPQSDGFGGGYKQSYGGGAVRGSSGYGGSRSAPYSDRGSRGGGG 331
Query: 381 SGYGAVGGR 355
GYG+ GGR
Sbjct: 332 GGYGSGGGR 340
>sp|Q8BG05|ROA3_MOUSE Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus
GN=Hnrnpa3 PE=1 SV=1
Length = 379
Score = 132 bits (332), Expect = 6e-030
Identities = 99/276 (35%), Positives = 130/276 (47%), Gaps = 36/276 (13%)
Frame = -3
Query: 1068 GANVRTKKIFVGGLPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDS 889
GA++ KKIFVGG+ R YFE YG + +M D+ + + RGF FV+FD D+
Sbjct: 120 GAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDT 179
Query: 888 VDLVLHKTFHDLSGKQVEVKRALPK----DANPGVAGGGGRGGFPGYGGGSGEGRLDSSR 721
VD ++ + +H ++G EVK+AL K A GGG G F G GG G G
Sbjct: 180 VDKIVVQKYHTINGHNCEVKKALSKQEMQSAGSQRGRGGGSGNFMGRGGNFGGG---GGN 236
Query: 720 YMPPQNAGGSGYPPYGAGYGYGSNGVGYGGFGGYGNPSGTPYGNPGVPGAGFGSGPRSSW 541
+ N GG G G G GS G G GG+ G+G G+ G G G G R +
Sbjct: 237 FGRGGNFGGRGGYGGGGGGSRGSYGGGDGGYNGFG-------GDGGNYGGGPGYSSRGGY 289
Query: 540 GGQAPSGYGNVGYGNAAPWGGSGPGSAVMGQGVHLQLWRSSYGYGGMILLW------DSS 379
GG P GYGN G G +GG G G +G + +YG GG + S
Sbjct: 290 GGGGP-GYGNQGGG----YGGGGGGYDGYNEGGN--FGGGNYGGGGNYNDFGNYSGQQQS 342
Query: 378 GY-----GAVGGRPNS--LGGGYAD--GSDGYGNHQ 298
Y G+ GGR + GGGY GS GYG+ +
Sbjct: 343 NYGPMKGGSFGGRSSGSPYGGGYGSGGGSGGYGSRR 378
>sp|Q6URK4|ROA3_RAT Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus
norvegicus GN=Hnrnpa3 PE=1 SV=1
Length = 379
Score = 132 bits (332), Expect = 6e-030
Identities = 99/276 (35%), Positives = 130/276 (47%), Gaps = 36/276 (13%)
Frame = -3
Query: 1068 GANVRTKKIFVGGLPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDS 889
GA++ KKIFVGG+ R YFE YG + +M D+ + + RGF FV+FD D+
Sbjct: 120 GAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDT 179
Query: 888 VDLVLHKTFHDLSGKQVEVKRALPK----DANPGVAGGGGRGGFPGYGGGSGEGRLDSSR 721
VD ++ + +H ++G EVK+AL K A GGG G F G GG G G
Sbjct: 180 VDKIVVQKYHTINGHNCEVKKALSKQEMQSAGSQRGRGGGSGNFMGRGGNFGGG---GGN 236
Query: 720 YMPPQNAGGSGYPPYGAGYGYGSNGVGYGGFGGYGNPSGTPYGNPGVPGAGFGSGPRSSW 541
+ N GG G G G GS G G GG+ G+G G+ G G G G R +
Sbjct: 237 FGRGGNFGGRGGYGGGGGGSRGSYGGGDGGYNGFG-------GDGGNYGGGPGYSSRGGY 289
Query: 540 GGQAPSGYGNVGYGNAAPWGGSGPGSAVMGQGVHLQLWRSSYGYGGMILLW------DSS 379
GG P GYGN G G +GG G G +G + +YG GG + S
Sbjct: 290 GGGGP-GYGNQGGG----YGGGGGGYDGYNEGGN--FGGGNYGGGGNYNDFGNYSGQQQS 342
Query: 378 GY-----GAVGGRPNS--LGGGYAD--GSDGYGNHQ 298
Y G+ GGR + GGGY GS GYG+ +
Sbjct: 343 NYGPMKGGSFGGRSSGSPYGGGYGSGGGSGGYGSRR 378
>sp|Q13151|ROA0_HUMAN Heterogeneous nuclear ribonucleoprotein A0 OS=Homo sapiens
GN=HNRNPA0 PE=1 SV=1
Length = 305
Score = 126 bits (316), Expect = 4e-028
Identities = 83/213 (38%), Positives = 107/213 (50%), Gaps = 12/213 (5%)
Frame = -3
Query: 1068 GANVRTKKIFVGGLPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDS 889
GA+ + KK+FVGGL + + +F +G V A I+ D+ + + RGFGFV F + D+
Sbjct: 92 GAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDA 151
Query: 888 VDLVLHKTFHDLSGKQVEVKRALPKDANPGVAGGGGRGGFPGYGGGSGEGRLDSSRYMPP 709
D FH + G +VEVK+A+PK+ +GGGG G GG G GR
Sbjct: 152 ADKAAVVKFHPIQGHRVEVKKAVPKE--DIYSGGGGGGSRSSRGGRGGRGRGGGRDQNGL 209
Query: 708 QNAGGSGYPPYGAGYGYGSNG--VGYGGFGGYGNPSGTPYGNPGVPGAGFGSGPRSSWGG 535
GG GY YG GYG G G YGG GG + G+ YGN G G G S +SS+G
Sbjct: 210 SKGGGGGYNSYG-GYGGGGGGGYNAYGGGGGGSSYGGSDYGN-GFGGFGSYSQHQSSYG- 266
Query: 534 QAPSGYGNVGYGNAAPWGG---SGPGSAVMGQG 445
P G G G + WGG SGP G G
Sbjct: 267 --PMKSGGGGGGGGSSWGGRSNSGPYRGGYGGG 297
>sp|P07909|ROA1_DROME Heterogeneous nuclear ribonucleoprotein A1 OS=Drosophila
melanogaster GN=Hrb98DE PE=1 SV=1
Length = 365
Score = 113 bits (281), Expect = 5e-024
Identities = 83/214 (38%), Positives = 104/214 (48%), Gaps = 13/214 (6%)
Frame = -3
Query: 1086 RSFDSGGANVRTKKIFVGGLPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVS 907
+ DS A KK+FVG L R YF+ +G + D I+ID+ T + RGF FV
Sbjct: 110 QDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVE 169
Query: 906 FDSEDSVDLVLHKTFHDLSGKQVEVKRALPKDANPGVAGGGGRGGFPGYGGGSGEGRLDS 727
FD D VD V+ + H L+GK V+VK+ALPK N GGGGRGG PG G G +
Sbjct: 170 FDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQ-NDQQGGGGGRGG-PGGRAGGNRGNMGG 227
Query: 726 SRYMPPQNAGG---SGYPPYGAGYG----YGSNGVGYGGFGGYGNPSG-TPYGNPGVPGA 571
Y QN GG +G +G G +G+N G GG GG G G +GN
Sbjct: 228 GNY-GNQNGGGNWNNGGNNWGNNRGGNDNWGNNSFGGGGGGGGGYGGGNNSWGNNNPWDN 286
Query: 570 GFGSGPRSSWGGQAPSGYGNVGYGNAAPWGGSGP 469
G G G G +G GN G +GG GP
Sbjct: 287 GNGGGNFGGGGNNWNNG-GNDFGGYQQNYGG-GP 318
>sp|Q96DH6|MSI2H_HUMAN RNA-binding protein Musashi homolog 2 OS=Homo sapiens
GN=MSI2 PE=1 SV=1
Length = 328
Score = 111 bits (275), Expect = 2e-023
Identities = 79/214 (36%), Positives = 104/214 (48%), Gaps = 17/214 (7%)
Frame = -3
Query: 1056 RTKKIFVGGLPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLV 877
RTKKIFVGGL ++ + YFE +G V DA++M D+TT R RGFGFV+F++ED V+ V
Sbjct: 108 RTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKV 167
Query: 876 LHKTFHDLSGKQVEVKRALPKDA--NPGVAGGGGRGGFPGYGGGSGEGRLDSSRYMPPQN 703
FH+++ K VE K+A PK+ PG G + G G L ++
Sbjct: 168 CEIHFHEINNKMVECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATY- 226
Query: 702 AGGSGYPPYGAGYGYGSNGVGYGGFG-------GYGNPSGTPYGNP-GVPGAGFGSGPRS 547
G GYP + YGY G +G SG+ P G PGA GP +
Sbjct: 227 --GRGYPGFAPSYGYQFPGFPAAAYGPVAAAAVAAARGSGSNPARPGGFPGAN-SPGPVA 283
Query: 546 SWGGQA--PSGYGNVGYGNAAPWGGSGPGSAVMG 451
G A SG GN A+P GSG G + G
Sbjct: 284 DLYGPASQDSGVGNY-ISAASPQPGSGFGHGIAG 316
Score = 93 bits (230), Expect = 4e-018
Identities = 45/98 (45%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
Frame = -3
Query: 1416 GSLGT----KSMESDQGKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGF 1249
GS GT + D GK+FIGG+SW T + LR+YF+ +GE+ + VMR+ T R RGF
Sbjct: 5 GSQGTSGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGF 64
Query: 1248 GLVSFSDPAVIDRVLQSKHH-IDNRDVDVKRAMSREEQ 1138
G V+F+DPA +D+VL HH +D++ +D K A R Q
Sbjct: 65 GFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQ 102
>sp|Q9VVE5|MSIR6_DROME RNA-binding protein Musashi homolog Rbp6 OS=Drosophila
melanogaster GN=Rbp6 PE=1 SV=3
Length = 369
Score = 107 bits (266), Expect = 3e-022
Identities = 61/148 (41%), Positives = 79/148 (53%), Gaps = 17/148 (11%)
Frame = -3
Query: 1056 RTKKIFVGGLPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLV 877
RTKKIFVGGL T ++ ++YFE +GP+ DA++M D+ T R RGFGFV+F SED VD V
Sbjct: 116 RTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKV 175
Query: 876 LHKTFHDLSGKQVEVKRALPKD----ANPGVAGGGGRGGFPGYGGGSGEGRLDSSRYMPP 709
FH+++ K VE K+A PK+ AN GR + G G P
Sbjct: 176 CEIHFHEINNKMVECKKAQPKEVMLPANLAKTRAAGRSAYDNIMWGLG---------TLP 226
Query: 708 QNAGGSGYPPYGAGYGYGSNGVGYGGFG 625
+ + Y Y AG GY GY FG
Sbjct: 227 EGFPAAAYAAYAAGRGYS----GYPSFG 250
>sp|P48809|RB27C_DROME Heterogeneous nuclear ribonucleoprotein 27C OS=Drosophila
melanogaster GN=Hrb27C PE=1 SV=2
Length = 421
Score = 103 bits (256), Expect = 4e-021
Identities = 69/198 (34%), Positives = 97/198 (48%), Gaps = 14/198 (7%)
Frame = -3
Query: 1047 KIFVGGLPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHK 868
K+F+GGLP +T + R +F YG V++ VIM DQ ++ RGFGF+SF+ E SV+ V ++
Sbjct: 97 KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 156
Query: 867 TFHDLSGKQVEVKRALPKDANPGVAGGGGRGGFPGYGGGSGEGRLDSSRYMP---PQNA- 700
+ +L+GKQVE+K+A P+D + GG GG G+ + S + P P N
Sbjct: 157 RYINLNGKQVEIKKAEPRDGS-----GGQNSNNSTVGGAYGKLGNECSHWGPHHAPINMM 211
Query: 699 ----GGSGYPPYGAGYGYGSNGVGYGGFGGYGNPSGTPYGNPGVPGAGFGSGPRSSWGGQ 532
G G PP G + GY G+G YGN G PG+ G G G
Sbjct: 212 QGQNGQMGGPPLNMPIGAPNMMPGYQGWGTSPQQQQYGYGNSG-PGSYQGWGAPPGPQGP 270
Query: 531 APSGYGNVGYGNAAPWGG 478
P G +GG
Sbjct: 271 PPQWSNYAGPQQTQGYGG 288
>sp|Q920Q6|MSI2H_MOUSE RNA-binding protein Musashi homolog 2 OS=Mus musculus
GN=Msi2 PE=1 SV=1
Length = 346
Score = 100 bits (248), Expect = 3e-020
Identities = 57/146 (39%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Frame = -3
Query: 1056 RTKKIFVGGLPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLV 877
RTKKIFVGGL ++ + YFE +G V DA++M D+TT R RGFGFV+F++ED V+ V
Sbjct: 108 RTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKV 167
Query: 876 LHKTFHDLSGKQVEVKRALPKDA--NPGVAGGGGRGGFPGYGGGSGEGRLDSSRYMPPQN 703
FH+++ K VE K+A PK+ PG G + G G L ++
Sbjct: 168 CEIHFHEINNKMVECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATY- 226
Query: 702 AGGSGYPPYGAGYGYGSNGVGYGGFG 625
G GYP + YGY G +G
Sbjct: 227 --GRGYPGFAPSYGYQFPGFPAAAYG 250
>sp|O43347|MSI1H_HUMAN RNA-binding protein Musashi homolog 1 OS=Homo sapiens
GN=MSI1 PE=1 SV=1
Length = 362
Score = 98 bits (242), Expect = 2e-019
Identities = 57/136 (41%), Positives = 74/136 (54%), Gaps = 4/136 (2%)
Frame = -3
Query: 1056 RTKKIFVGGLPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLV 877
RTKKIFVGGL T ++ + YFE +G V DA++M D+TT R RGFGFV+F+SED V+ V
Sbjct: 107 RTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKV 166
Query: 876 LHKTFHDLSGKQVEVKRALPKDANPGVAGGGGRGGFPGYGGGS---GEGRLDSSRYMPPQ 706
FH+++ K VE K+A PK+ GR YG + G G L +
Sbjct: 167 CEIHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATT 226
Query: 705 NAGGSGYPPYGAGYGY 658
A S Y GY Y
Sbjct: 227 YASRS-YTGLAPGYTY 241
>sp|Q61474|MSI1H_MOUSE RNA-binding protein Musashi homolog 1 OS=Mus musculus
GN=Msi1 PE=1 SV=1
Length = 362
Score = 97 bits (241), Expect = 2e-019
Identities = 57/136 (41%), Positives = 74/136 (54%), Gaps = 4/136 (2%)
Frame = -3
Query: 1056 RTKKIFVGGLPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLV 877
RTKKIFVGGL T ++ + YFE +G V DA++M D+TT R RGFGFV+F+SED V+ V
Sbjct: 107 RTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKV 166
Query: 876 LHKTFHDLSGKQVEVKRALPKDANPGVAGGGGRGGFPGYGGGS---GEGRLDSSRYMPPQ 706
FH+++ K VE K+A PK+ GR YG + G G L +
Sbjct: 167 CEIHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATT 226
Query: 705 NAGGSGYPPYGAGYGY 658
A S Y GY Y
Sbjct: 227 YASRS-YTGLAPGYTY 241
>sp|Q8K3P4|MSI1H_RAT RNA-binding protein Musashi homolog 1 OS=Rattus norvegicus
GN=Msi1 PE=2 SV=1
Length = 362
Score = 97 bits (241), Expect = 2e-019
Identities = 57/136 (41%), Positives = 74/136 (54%), Gaps = 4/136 (2%)
Frame = -3
Query: 1056 RTKKIFVGGLPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLV 877
RTKKIFVGGL T ++ + YFE +G V DA++M D+TT R RGFGFV+F+SED V+ V
Sbjct: 107 RTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKV 166
Query: 876 LHKTFHDLSGKQVEVKRALPKDANPGVAGGGGRGGFPGYGGGS---GEGRLDSSRYMPPQ 706
FH+++ K VE K+A PK+ GR YG + G G L +
Sbjct: 167 CEIHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATT 226
Query: 705 NAGGSGYPPYGAGYGY 658
A S Y GY Y
Sbjct: 227 YASRS-YTGLAPGYTY 241
>sp|O94432|YHKF_SCHPO Uncharacterized RNA-binding protein C660.15
OS=Schizosaccharomyces pombe GN=SPBC660.15 PE=2 SV=1
Length = 474
Score = 97 bits (241), Expect = 2e-019
Identities = 40/89 (44%), Positives = 61/89 (68%)
Frame = -3
Query: 1404 TKSMESDQGKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGFGLVSFSDP 1225
T + GK+FIGG++W+T ++ LR+YF +GEV TVMR+ T R RGFG ++F +P
Sbjct: 155 TSPFNREDGKMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNP 214
Query: 1224 AVIDRVLQSKHHIDNRDVDVKRAMSREEQ 1138
++ V+ +HH+D + +D KRA+ REEQ
Sbjct: 215 KCVNEVMSKEHHLDGKIIDPKRAIPREEQ 243
>sp|Q99383|HRP1_YEAST Nuclear polyadenylated RNA-binding protein 4
OS=Saccharomyces cerevisiae GN=HRP1 PE=1 SV=1
Length = 534
Score = 94 bits (232), Expect = 2e-018
Identities = 40/90 (44%), Positives = 63/90 (70%)
Frame = -3
Query: 1395 MESDQGKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGFGLVSFSDPAVI 1216
+ + K+FIGG++WDT E+ LREYF YG V+ + +M++ AT R RGFG +SF P+ +
Sbjct: 154 LSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSV 213
Query: 1215 DRVLQSKHHIDNRDVDVKRAMSREEQSPGG 1126
D V++++H +D + +D KRA+ R+EQ G
Sbjct: 214 DEVVKTQHILDGKVIDPKRAIPRDEQDKTG 243
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,733,448,049
Number of Sequences: 518415
Number of Extensions: 32733448049
Number of Successful Extensions: 231167770
Number of sequences better than 0.0: 0
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