BLASTX 7.6.2
Query= UN08126 /QuerySize=1530
(1529 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G33410.1 | Symbols: | heterogeneous nuclear r... 629 2e-180
TAIR9_protein||AT4G14300.1 | Symbols: | heterogeneous nuclear r... 426 3e-119
TAIR9_protein||AT4G26650.1 | Symbols: | RNA recognition motif (... 240 2e-063
TAIR9_protein||AT4G26650.2 | Symbols: | RNA recognition motif (... 240 2e-063
TAIR9_protein||AT5G55550.1 | Symbols: | RNA recognition motif (... 231 1e-060
TAIR9_protein||AT5G55550.3 | Symbols: | RNA recognition motif (... 231 1e-060
TAIR9_protein||AT5G55550.2 | Symbols: | RNA recognition motif (... 231 1e-060
TAIR9_protein||AT1G58470.1 | Symbols: ATRBP1, RBP1 | ATRBP1 (ARA... 193 4e-049
TAIR9_protein||AT3G07810.1 | Symbols: | heterogeneous nuclear r... 139 6e-033
TAIR9_protein||AT3G07810.2 | Symbols: | heterogeneous nuclear r... 139 6e-033
TAIR9_protein||AT5G47620.1 | Symbols: | heterogeneous nuclear r... 121 2e-027
TAIR9_protein||AT5G47620.2 | Symbols: | heterogeneous nuclear r... 121 2e-027
TAIR9_protein||AT5G47620.3 | Symbols: | heterogeneous nuclear r... 121 2e-027
TAIR9_protein||AT1G17640.1 | Symbols: | RNA recognition motif (... 88 1e-017
>TAIR9_protein||AT2G33410.1 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr2:14156085-14157435
FORWARD
Length = 405
Score = 629 bits (1621), Expect = 2e-180
Identities = 328/412 (79%), Positives = 344/412 (83%), Gaps = 32/412 (7%)
Frame = -3
Query: 1395 MESDQGKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGFGLVSFSDPAVI 1216
MESDQGKLFIGGISWDTDENLLREYF+N+GEV QVTVMREKAT RPRGFG V+FSDPAVI
Sbjct: 1 MESDQGKLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVI 60
Query: 1215 DRVLQSKHHIDNRDVDVKRAMSREEQSPGGGGGSRGGSFSGASRSFDSGGANVRTKKIFV 1036
DRVLQ KHHIDNRDVDVKRAMSREEQSP G R G+F+ ASR+FDS GANVRTKKIFV
Sbjct: 61 DRVLQDKHHIDNRDVDVKRAMSREEQSPAG----RSGTFN-ASRNFDS-GANVRTKKIFV 114
Query: 1035 GGLPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHD 856
GGLPPALTSDEFRAYFE+YGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHD
Sbjct: 115 GGLPPALTSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHD 174
Query: 855 LSGKQVEVKRALPKDANPGVAGGGGR-----GGFPGYGGGSG---EGRLDSSRYMPPQNA 700
L+GKQVEVKRALPKDANPG+A GGGR GGFPGYGG G EGR+DS+RYM PQN
Sbjct: 175 LNGKQVEVKRALPKDANPGIASGGGRGSGGAGGFPGYGGSGGSGYEGRVDSNRYMQPQNT 234
Query: 699 GGSGYPP-----YGAGYGYGSNGVGYGGFGGYGNPSGTPYGNPGVPGAGFGSGPRSSWGG 535
GSGYPP YG GYGYGSNGVGYGGFGGYGNP+G PYGNP VPGAGFGSGPRSSWG
Sbjct: 235 -GSGYPPYGGSGYGTGYGYGSNGVGYGGFGGYGNPAGAPYGNPSVPGAGFGSGPRSSWGA 293
Query: 534 QAPSGYGNVGYGNAAPWGGS-GPGSAVMGQ-GVHLQLWRSSYGYGGMILLWDS-SGYGAV 364
QAPSGYGNVGYGNAAPWGGS GPGSAVMGQ G YGYGG + + S YGAV
Sbjct: 294 QAPSGYGNVGYGNAAPWGGSGGPGSAVMGQAGASAGYGSQGYGYGGNDSSYGTPSAYGAV 353
Query: 363 GGRPNSL-----GGGYA---DGSDGYGNHQG-NGQAGYGGGYGSGNQALQQ* 235
GGR ++ GGGYA DGS GYGNHQG NGQAGYGGGYGSG QA QQ*
Sbjct: 354 GGRSGNMPNNHGGGGYADALDGSGGYGNHQGNNGQAGYGGGYGSGRQAQQQ* 405
>TAIR9_protein||AT4G14300.1 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr4:8231179-8232785
FORWARD
Length = 412
Score = 426 bits (1093), Expect = 3e-119
Identities = 235/412 (57%), Positives = 269/412 (65%), Gaps = 39/412 (9%)
Frame = -3
Query: 1395 MESDQGKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGFGLVSFSDPAVI 1216
M+SDQGKLF+GGISW+TDE+ LRE+FTNYGEVSQ VMR+K T RPRGFG V FSDP+V+
Sbjct: 1 MDSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVL 60
Query: 1215 DRVLQSKHHIDNRDVDVKRAMSREEQSPGGGGGSRGGSFSGASRSFDSGGANVRTKKIFV 1036
DRVLQ KH ID R+VDVKRAMSREEQ G G+ S S G A +TKKIFV
Sbjct: 61 DRVLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRS------SGGDAYNKTKKIFV 114
Query: 1035 GGLPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHD 856
GGLPP LT +EFR YFE YGPV+D IM DQ T RPRGFGFVSFDSED+VD VLHKTFHD
Sbjct: 115 GGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHD 174
Query: 855 LSGKQVEVKRALPKDANPG----VAGGGGRGGFPGYGG--GSGEGRLDSSRYMPPQNAGG 694
LSGKQVEVKRALPKDANPG GGGG GG+ GYGG S +GR+DS+R++ Q+ G
Sbjct: 175 LSGKQVEVKRALPKDANPGGGGRSMGGGGSGGYQGYGGNESSYDGRMDSNRFLQHQSVGN 234
Query: 693 S----GYPPYGAGYGYGSNGVGYGGFGGYGNPSG-------TPYGNPGVPGAGFGS---- 559
G YGAGYG GSNG GYG +GGY +G YG +PGAG+GS
Sbjct: 235 GLPSYGSSGYGAGYGNGSNGAGYGAYGGYTGSAGGYGAGATAGYGATNIPGAGYGSSTGV 294
Query: 558 GPRSSWGGQAPSGYGNVGYGNAAPWGGSG-PGSAVMGQGVHLQLWRSSYGYGGM----IL 394
PR+SW A SGYGN GYG+ A G G PG+A Q YGYGG
Sbjct: 295 APRNSWDTPASSGYGNPGYGSGAAHSGYGVPGAAPPTQSPS-GYSNQGYGYGGYSGSDSG 353
Query: 393 LWDSSGYGAVGGRPNSLG------GGYADGSDGYGNHQGNGQAGYGGGYGSG 256
+ + YG VGGRP+ G GGY G G G+ + + GYGGGY G
Sbjct: 354 YGNQAAYGVVGGRPSGGGSNNPGSGGYMGGGYGDGSWRSDPSQGYGGGYNDG 405
>TAIR9_protein||AT4G26650.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:13445552-13447592 FORWARD
Length = 456
Score = 240 bits (611), Expect = 2e-063
Identities = 151/383 (39%), Positives = 211/383 (55%), Gaps = 27/383 (7%)
Frame = -3
Query: 1389 SDQGKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGFGLVSFSDPAVIDR 1210
SD GKLFIGGISWDTDE L+EYF YG++ + +MR++ T R RGFG + F+DP+V +R
Sbjct: 12 SDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAER 71
Query: 1209 VLQSKHHIDNRDVDVKRAMSREEQSPGGGGGSRGGSFSGASRSFDSGGANVRTKKIFVGG 1030
V+ KH ID R V+ K+A+ R++Q S S S G RTKKIFVGG
Sbjct: 72 VIMDKHIIDGRTVEAKKAVPRDDQQVLKRHAS---PMHLISPSHGGNGGGARTKKIFVGG 128
Query: 1029 LPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLS 850
LP ++T EF+ YF+ +G ++D V+M D TQRPRGFGF++FDSE+SVD+VLHKTFH+L+
Sbjct: 129 LPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELN 188
Query: 849 GKQVEVKRALPKDANPGVAGGGGRGGFPGYGGGSG--EGRLDSSRY---MPP----QNAG 697
GK VEVKRA+PK+ + R GYG G R ++ Y PP N G
Sbjct: 189 GKMVEVKRAVPKELSSTTP---NRSPLIGYGNNYGVVPNRSSANSYFNSFPPGYNNNNLG 245
Query: 696 GSG-YPPYGAG-YGYGSNGVGYG-GFGGYGNPSGTPYGNPGVPG-AGFGSGPRSSWGGQA 529
+G + P G+G + S G+G N G G +PG F S + + +
Sbjct: 246 SAGRFSPIGSGRNAFSSFGLGLNQELNLNSNFDGNTLGYSRIPGNQYFNSASPNRY--NS 303
Query: 528 PSGY--GNVGY--GNAAPWGGSGPGSAVMGQGVHLQLWRSSYGYGGMILLWDSSGYGAVG 361
P GY G+ Y N WG S G + + + + +G ++ D++GYG
Sbjct: 304 PIGYNRGDSAYNPSNRDLWGNRSDSSG-PGWNLGVSVGNNRGNWGLSSVVSDNNGYGRSY 362
Query: 360 GRPNSLGG-GYADGSDGYGNHQG 295
G + L G +A ++G+ G
Sbjct: 363 GAGSGLSGLSFAGNTNGFDGSIG 385
>TAIR9_protein||AT4G26650.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:13445265-13447592 FORWARD
Length = 453
Score = 240 bits (611), Expect = 2e-063
Identities = 151/383 (39%), Positives = 211/383 (55%), Gaps = 27/383 (7%)
Frame = -3
Query: 1389 SDQGKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGFGLVSFSDPAVIDR 1210
SD GKLFIGGISWDTDE L+EYF YG++ + +MR++ T R RGFG + F+DP+V +R
Sbjct: 9 SDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAER 68
Query: 1209 VLQSKHHIDNRDVDVKRAMSREEQSPGGGGGSRGGSFSGASRSFDSGGANVRTKKIFVGG 1030
V+ KH ID R V+ K+A+ R++Q S S S G RTKKIFVGG
Sbjct: 69 VIMDKHIIDGRTVEAKKAVPRDDQQVLKRHAS---PMHLISPSHGGNGGGARTKKIFVGG 125
Query: 1029 LPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLS 850
LP ++T EF+ YF+ +G ++D V+M D TQRPRGFGF++FDSE+SVD+VLHKTFH+L+
Sbjct: 126 LPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELN 185
Query: 849 GKQVEVKRALPKDANPGVAGGGGRGGFPGYGGGSG--EGRLDSSRY---MPP----QNAG 697
GK VEVKRA+PK+ + R GYG G R ++ Y PP N G
Sbjct: 186 GKMVEVKRAVPKELSSTTP---NRSPLIGYGNNYGVVPNRSSANSYFNSFPPGYNNNNLG 242
Query: 696 GSG-YPPYGAG-YGYGSNGVGYG-GFGGYGNPSGTPYGNPGVPG-AGFGSGPRSSWGGQA 529
+G + P G+G + S G+G N G G +PG F S + + +
Sbjct: 243 SAGRFSPIGSGRNAFSSFGLGLNQELNLNSNFDGNTLGYSRIPGNQYFNSASPNRY--NS 300
Query: 528 PSGY--GNVGY--GNAAPWGGSGPGSAVMGQGVHLQLWRSSYGYGGMILLWDSSGYGAVG 361
P GY G+ Y N WG S G + + + + +G ++ D++GYG
Sbjct: 301 PIGYNRGDSAYNPSNRDLWGNRSDSSG-PGWNLGVSVGNNRGNWGLSSVVSDNNGYGRSY 359
Query: 360 GRPNSLGG-GYADGSDGYGNHQG 295
G + L G +A ++G+ G
Sbjct: 360 GAGSGLSGLSFAGNTNGFDGSIG 382
>TAIR9_protein||AT5G55550.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:22502077-22503658 REVERSE
Length = 449
Score = 231 bits (587), Expect = 1e-060
Identities = 125/262 (47%), Positives = 164/262 (62%), Gaps = 11/262 (4%)
Frame = -3
Query: 1395 MESDQGKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGFGLVSFSDPAVI 1216
MESD GKLFIGGISWDTDE LR+YF+NYG+V + +MR++AT R RGFG + F+DP V
Sbjct: 1 MESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVS 60
Query: 1215 DRVLQSKHHIDNRDVDVKRAMSREEQSPGGGGGSRGGSFSGASRSFDSGGANVRTKKIFV 1036
+RV+ KH ID R V+ K+A+ R++Q R S GG RTKKIFV
Sbjct: 61 ERVIMDKHIIDGRTVEAKKAVPRDDQQV----LKRHASPIHLMSPVHGGGG--RTKKIFV 114
Query: 1035 GGLPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHD 856
GGLP ++T +EF+ YF+ +G ++D V+M D TQRPRGFGF++FDS+D+VD VLHKTFH+
Sbjct: 115 GGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHE 174
Query: 855 LSGKQVEVKRALPKDANPGVAGGGGRGGFPGYGGGSGEGRLDS--SRYMPP---QNAGGS 691
L+GK VEVKRA+PK+ +P YGGGS +S + + P N+ G
Sbjct: 175 LNGKLVEVKRAVPKEISPVSNIRSPLASGVNYGGGSNRMPANSYFNNFAPGPGFYNSLGP 234
Query: 690 GYPPYGAGYGYGSNGVGYGGFG 625
+ G G N V G G
Sbjct: 235 VGRRFSPVIGSGRNAVSAFGLG 256
>TAIR9_protein||AT5G55550.3 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:22502135-22503658 REVERSE
Length = 461
Score = 231 bits (587), Expect = 1e-060
Identities = 125/262 (47%), Positives = 164/262 (62%), Gaps = 11/262 (4%)
Frame = -3
Query: 1395 MESDQGKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGFGLVSFSDPAVI 1216
MESD GKLFIGGISWDTDE LR+YF+NYG+V + +MR++AT R RGFG + F+DP V
Sbjct: 1 MESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVS 60
Query: 1215 DRVLQSKHHIDNRDVDVKRAMSREEQSPGGGGGSRGGSFSGASRSFDSGGANVRTKKIFV 1036
+RV+ KH ID R V+ K+A+ R++Q R S GG RTKKIFV
Sbjct: 61 ERVIMDKHIIDGRTVEAKKAVPRDDQQV----LKRHASPIHLMSPVHGGGG--RTKKIFV 114
Query: 1035 GGLPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHD 856
GGLP ++T +EF+ YF+ +G ++D V+M D TQRPRGFGF++FDS+D+VD VLHKTFH+
Sbjct: 115 GGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHE 174
Query: 855 LSGKQVEVKRALPKDANPGVAGGGGRGGFPGYGGGSGEGRLDS--SRYMPP---QNAGGS 691
L+GK VEVKRA+PK+ +P YGGGS +S + + P N+ G
Sbjct: 175 LNGKLVEVKRAVPKEISPVSNIRSPLASGVNYGGGSNRMPANSYFNNFAPGPGFYNSLGP 234
Query: 690 GYPPYGAGYGYGSNGVGYGGFG 625
+ G G N V G G
Sbjct: 235 VGRRFSPVIGSGRNAVSAFGLG 256
>TAIR9_protein||AT5G55550.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:22502135-22503658 REVERSE
Length = 461
Score = 231 bits (587), Expect = 1e-060
Identities = 125/262 (47%), Positives = 164/262 (62%), Gaps = 11/262 (4%)
Frame = -3
Query: 1395 MESDQGKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGFGLVSFSDPAVI 1216
MESD GKLFIGGISWDTDE LR+YF+NYG+V + +MR++AT R RGFG + F+DP V
Sbjct: 1 MESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVS 60
Query: 1215 DRVLQSKHHIDNRDVDVKRAMSREEQSPGGGGGSRGGSFSGASRSFDSGGANVRTKKIFV 1036
+RV+ KH ID R V+ K+A+ R++Q R S GG RTKKIFV
Sbjct: 61 ERVIMDKHIIDGRTVEAKKAVPRDDQQV----LKRHASPIHLMSPVHGGGG--RTKKIFV 114
Query: 1035 GGLPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHD 856
GGLP ++T +EF+ YF+ +G ++D V+M D TQRPRGFGF++FDS+D+VD VLHKTFH+
Sbjct: 115 GGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHE 174
Query: 855 LSGKQVEVKRALPKDANPGVAGGGGRGGFPGYGGGSGEGRLDS--SRYMPP---QNAGGS 691
L+GK VEVKRA+PK+ +P YGGGS +S + + P N+ G
Sbjct: 175 LNGKLVEVKRAVPKEISPVSNIRSPLASGVNYGGGSNRMPANSYFNNFAPGPGFYNSLGP 234
Query: 690 GYPPYGAGYGYGSNGVGYGGFG 625
+ G G N V G G
Sbjct: 235 VGRRFSPVIGSGRNAVSAFGLG 256
>TAIR9_protein||AT1G58470.1 | Symbols: ATRBP1, RBP1 | ATRBP1 (ARABIDOPSIS
THALIANA RNA-BINDING PROTEIN 1); RNA binding / single-stranded RNA
binding | chr1:21727374-21728539 FORWARD
Length = 361
Score = 193 bits (488), Expect = 4e-049
Identities = 116/307 (37%), Positives = 165/307 (53%), Gaps = 22/307 (7%)
Frame = -3
Query: 1395 MESDQGKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGFGLVSFSDPAVI 1216
M+ D+ KLF+GGI+ +T E L++YF+ YG V + V +EK T +PRGFG V F++ +
Sbjct: 1 MDYDRYKLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDV 60
Query: 1215 DRVLQSKHHIDNRDVDVKRAMSREE--QSPGGGG--GSRGGSFSGASRSFDSGGANVRTK 1048
+ L+ H I + VDV++A+ + E Q P + +G R S G RTK
Sbjct: 61 VKALRDTHFILGKPVDVRKAIRKHELYQQPFSMQFLERKVQQMNGGLREMSSNGVTSRTK 120
Query: 1047 KIFVGGLPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHK 868
KIFVGGL T +EF++YFE +G +D V+M D T RPRGFGFV++DSEDSV++V+
Sbjct: 121 KIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRPRGFGFVTYDSEDSVEVVMQS 180
Query: 867 TFHDLSGKQVEVKRALPKDANPGVAGGGGRGGF--PGYGGGSGEGRLDSSRYMPPQNAGG 694
FH+LS K+VEVKRA+PK+ G+ G P Y ++ Y+P QN G
Sbjct: 181 NFHELSDKRVEVKRAIPKE---GIQSNNGNAVNIPPSYSS------FQATPYVPEQNGYG 231
Query: 693 S--GYPPYGAGYGYGSNGVGYG-GFGGYGNPSGTPYGNPGVPGAGFGSGPRSSWGGQAPS 523
+PP GY + V Y G+ + + NP + GF P P
Sbjct: 232 MVLQFPPPVFGYHHNVQAVQYPYGYQFTAQVANVSWNNPIMQPTGFYCAPPH----PTPP 287
Query: 522 GYGNVGY 502
N+GY
Sbjct: 288 PTNNLGY 294
>TAIR9_protein||AT3G07810.1 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr3:2492875-2495052
FORWARD
Length = 495
Score = 139 bits (349), Expect = 6e-033
Identities = 89/234 (38%), Positives = 126/234 (53%), Gaps = 6/234 (2%)
Frame = -3
Query: 1098 SGASRSFDSGGANVRTKKIFVGGLPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGF 919
S +S S G RT+KIFVGGLP ++T +F+ YFE +G +D V+M D TQRPRGF
Sbjct: 92 SNSSSIQGSPGGPGRTRKIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGF 151
Query: 918 GFVSFDSEDSVDLVLHKTFHDLSGKQVEVKRALPKDANPGVAGGGGRGGFPGYGGGSGEG 739
GF+++DSE++V+ VL KTFH+L+GK VEVKRA+PK+ +PG + G+ YG
Sbjct: 152 GFITYDSEEAVEKVLLKTFHELNGKMVEVKRAVPKELSPGPSRSPLGAGY-SYGVNRVNN 210
Query: 738 RLDS-SRYMPPQNAGGSGYPPYGAGYGYGSNGVGYGGF-GGYGNPSGTPYGNP-GVPGAG 568
L+ ++ P GG G G G+ G+ + GYG G P G G
Sbjct: 211 LLNGYAQGFNPAAVGGYGLRMDGRFSPVGAGRSGFANYSSGYGMNVNFDQGLPTGFTGGT 270
Query: 567 FGSGPRSSWGGQAPSGYGNVG-YGNAAPW-GGSGPGSAVMGQGVHLQLWRSSYG 412
+G G +P GN +G A + GG+G G++ V LW ++ G
Sbjct: 271 NYNGNVDYGRGMSPYYIGNTNRFGPAVGYEGGNGGGNSSFFSSVTRNLWGNNGG 324
Score = 107 bits (265), Expect = 3e-023
Identities = 46/87 (52%), Positives = 68/87 (78%)
Frame = -3
Query: 1395 MESDQGKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGFGLVSFSDPAVI 1216
M+SD GKLFIGGISWDT+E L+EYF+++GEV + +++++ T R RGFG V F+DPAV
Sbjct: 1 MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60
Query: 1215 DRVLQSKHHIDNRDVDVKRAMSREEQS 1135
+ V+ KH+ID R V+ K+A+ R++Q+
Sbjct: 61 EIVITEKHNIDGRLVEAKKAVPRDDQN 87
>TAIR9_protein||AT3G07810.2 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr3:2492875-2495102
FORWARD
Length = 496
Score = 139 bits (349), Expect = 6e-033
Identities = 89/234 (38%), Positives = 126/234 (53%), Gaps = 6/234 (2%)
Frame = -3
Query: 1098 SGASRSFDSGGANVRTKKIFVGGLPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRGF 919
S +S S G RT+KIFVGGLP ++T +F+ YFE +G +D V+M D TQRPRGF
Sbjct: 92 SNSSSIQGSPGGPGRTRKIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGF 151
Query: 918 GFVSFDSEDSVDLVLHKTFHDLSGKQVEVKRALPKDANPGVAGGGGRGGFPGYGGGSGEG 739
GF+++DSE++V+ VL KTFH+L+GK VEVKRA+PK+ +PG + G+ YG
Sbjct: 152 GFITYDSEEAVEKVLLKTFHELNGKMVEVKRAVPKELSPGPSRSPLGAGY-SYGVNRVNN 210
Query: 738 RLDS-SRYMPPQNAGGSGYPPYGAGYGYGSNGVGYGGF-GGYGNPSGTPYGNP-GVPGAG 568
L+ ++ P GG G G G+ G+ + GYG G P G G
Sbjct: 211 LLNGYAQGFNPAAVGGYGLRMDGRFSPVGAGRSGFANYSSGYGMNVNFDQGLPTGFTGGT 270
Query: 567 FGSGPRSSWGGQAPSGYGNVG-YGNAAPW-GGSGPGSAVMGQGVHLQLWRSSYG 412
+G G +P GN +G A + GG+G G++ V LW ++ G
Sbjct: 271 NYNGNVDYGRGMSPYYIGNTNRFGPAVGYEGGNGGGNSSFFSSVTRNLWGNNGG 324
Score = 107 bits (265), Expect = 3e-023
Identities = 46/87 (52%), Positives = 68/87 (78%)
Frame = -3
Query: 1395 MESDQGKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGFGLVSFSDPAVI 1216
M+SD GKLFIGGISWDT+E L+EYF+++GEV + +++++ T R RGFG V F+DPAV
Sbjct: 1 MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60
Query: 1215 DRVLQSKHHIDNRDVDVKRAMSREEQS 1135
+ V+ KH+ID R V+ K+A+ R++Q+
Sbjct: 61 EIVITEKHNIDGRLVEAKKAVPRDDQN 87
>TAIR9_protein||AT5G47620.1 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr5:19302548-19304278
REVERSE
Length = 432
Score = 121 bits (302), Expect = 2e-027
Identities = 96/312 (30%), Positives = 143/312 (45%), Gaps = 29/312 (9%)
Frame = -3
Query: 1101 FSGASRSFDSGGANVRTKKIFVGGLPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRG 922
F+ ++ S +KKIFVGGL ++T EF+ YF +G ++D V+M D TQRPRG
Sbjct: 89 FNKSNSSLQGSPGPSNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRG 148
Query: 921 FGFVSFDSEDSVDLVLHKTFHDLSGKQVEVKRALPKDANPGVAGGGGRGGFPGYGGGSGE 742
FGF+S+DSE++VD VL KTFH+L+GK VEVK A+PKD + + +G
Sbjct: 149 FGFISYDSEEAVDKVLQKTFHELNGKMVEVKLAVPKDM--ALNTMRNQMNVNSFGTSRIS 206
Query: 741 GRLDS-SRYMPPQNAGGSGYPP---YGAGYGYGSNGVGYGGFGGYGNPSGTPYGNPGVPG 574
L+ ++ P G G P Y G GGF +G+ G
Sbjct: 207 SLLNEYTQGFSPSPISGYGVKPEVRYSPAVG------NRGGFSPFGHGYGIELNFEPNQT 260
Query: 573 AGFGSGPRSSWGGQAPSGY-GNVG-YGNAAPWGGSGPGS-AVMGQGVHLQLWRSSYGYGG 403
+GSG +G GY ++G +G+ GG+ G+ +V+ LW G GG
Sbjct: 261 QNYGSGSSGGFGRPFSPGYAASLGRFGSQMESGGASVGNGSVLNAAPKNHLW----GNGG 316
Query: 402 MILLWDS----------SGYGAVGGRPNSLGGGYADGSDGYGNHQGNGQAGYGGGYGSGN 253
+ + +S SG ++G ++ G S +G G G G + G
Sbjct: 317 LGYMSNSPISRSSFSGNSGMSSLGSIGDNWGTVARARSSYHGERGGVGLEAMRGVHVGGY 376
Query: 252 QALQQ*LEEERL 217
+ LE + L
Sbjct: 377 SSGSSILEADSL 388
Score = 96 bits (236), Expect = 7e-020
Identities = 43/85 (50%), Positives = 63/85 (74%)
Frame = -3
Query: 1395 MESDQGKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGFGLVSFSDPAVI 1216
ME + KLFIGGISW+T E+ LR+YF ++GEV + +M+++AT R RGFG V F+DP V
Sbjct: 1 MEMESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVA 60
Query: 1215 DRVLQSKHHIDNRDVDVKRAMSREE 1141
+RV+ KH ID + V+ K+A+ R++
Sbjct: 61 ERVVLLKHIIDGKIVEAKKAVPRDD 85
>TAIR9_protein||AT5G47620.2 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr5:19302548-19304278
REVERSE
Length = 432
Score = 121 bits (302), Expect = 2e-027
Identities = 96/312 (30%), Positives = 143/312 (45%), Gaps = 29/312 (9%)
Frame = -3
Query: 1101 FSGASRSFDSGGANVRTKKIFVGGLPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRG 922
F+ ++ S +KKIFVGGL ++T EF+ YF +G ++D V+M D TQRPRG
Sbjct: 89 FNKSNSSLQGSPGPSNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRG 148
Query: 921 FGFVSFDSEDSVDLVLHKTFHDLSGKQVEVKRALPKDANPGVAGGGGRGGFPGYGGGSGE 742
FGF+S+DSE++VD VL KTFH+L+GK VEVK A+PKD + + +G
Sbjct: 149 FGFISYDSEEAVDKVLQKTFHELNGKMVEVKLAVPKDM--ALNTMRNQMNVNSFGTSRIS 206
Query: 741 GRLDS-SRYMPPQNAGGSGYPP---YGAGYGYGSNGVGYGGFGGYGNPSGTPYGNPGVPG 574
L+ ++ P G G P Y G GGF +G+ G
Sbjct: 207 SLLNEYTQGFSPSPISGYGVKPEVRYSPAVG------NRGGFSPFGHGYGIELNFEPNQT 260
Query: 573 AGFGSGPRSSWGGQAPSGY-GNVG-YGNAAPWGGSGPGS-AVMGQGVHLQLWRSSYGYGG 403
+GSG +G GY ++G +G+ GG+ G+ +V+ LW G GG
Sbjct: 261 QNYGSGSSGGFGRPFSPGYAASLGRFGSQMESGGASVGNGSVLNAAPKNHLW----GNGG 316
Query: 402 MILLWDS----------SGYGAVGGRPNSLGGGYADGSDGYGNHQGNGQAGYGGGYGSGN 253
+ + +S SG ++G ++ G S +G G G G + G
Sbjct: 317 LGYMSNSPISRSSFSGNSGMSSLGSIGDNWGTVARARSSYHGERGGVGLEAMRGVHVGGY 376
Query: 252 QALQQ*LEEERL 217
+ LE + L
Sbjct: 377 SSGSSILEADSL 388
Score = 96 bits (236), Expect = 7e-020
Identities = 43/85 (50%), Positives = 63/85 (74%)
Frame = -3
Query: 1395 MESDQGKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGFGLVSFSDPAVI 1216
ME + KLFIGGISW+T E+ LR+YF ++GEV + +M+++AT R RGFG V F+DP V
Sbjct: 1 MEMESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVA 60
Query: 1215 DRVLQSKHHIDNRDVDVKRAMSREE 1141
+RV+ KH ID + V+ K+A+ R++
Sbjct: 61 ERVVLLKHIIDGKIVEAKKAVPRDD 85
>TAIR9_protein||AT5G47620.3 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr5:19302548-19304106
REVERSE
Length = 372
Score = 121 bits (302), Expect = 2e-027
Identities = 96/312 (30%), Positives = 143/312 (45%), Gaps = 29/312 (9%)
Frame = -3
Query: 1101 FSGASRSFDSGGANVRTKKIFVGGLPPALTSDEFRAYFESYGPVSDAVIMIDQTTQRPRG 922
F+ ++ S +KKIFVGGL ++T EF+ YF +G ++D V+M D TQRPRG
Sbjct: 29 FNKSNSSLQGSPGPSNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRG 88
Query: 921 FGFVSFDSEDSVDLVLHKTFHDLSGKQVEVKRALPKDANPGVAGGGGRGGFPGYGGGSGE 742
FGF+S+DSE++VD VL KTFH+L+GK VEVK A+PKD + + +G
Sbjct: 89 FGFISYDSEEAVDKVLQKTFHELNGKMVEVKLAVPKDM--ALNTMRNQMNVNSFGTSRIS 146
Query: 741 GRLDS-SRYMPPQNAGGSGYPP---YGAGYGYGSNGVGYGGFGGYGNPSGTPYGNPGVPG 574
L+ ++ P G G P Y G GGF +G+ G
Sbjct: 147 SLLNEYTQGFSPSPISGYGVKPEVRYSPAVG------NRGGFSPFGHGYGIELNFEPNQT 200
Query: 573 AGFGSGPRSSWGGQAPSGY-GNVG-YGNAAPWGGSGPGS-AVMGQGVHLQLWRSSYGYGG 403
+GSG +G GY ++G +G+ GG+ G+ +V+ LW G GG
Sbjct: 201 QNYGSGSSGGFGRPFSPGYAASLGRFGSQMESGGASVGNGSVLNAAPKNHLW----GNGG 256
Query: 402 MILLWDS----------SGYGAVGGRPNSLGGGYADGSDGYGNHQGNGQAGYGGGYGSGN 253
+ + +S SG ++G ++ G S +G G G G + G
Sbjct: 257 LGYMSNSPISRSSFSGNSGMSSLGSIGDNWGTVARARSSYHGERGGVGLEAMRGVHVGGY 316
Query: 252 QALQQ*LEEERL 217
+ LE + L
Sbjct: 317 SSGSSILEADSL 328
>TAIR9_protein||AT1G17640.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:6067394-6069098 REVERSE
Length = 370
Score = 88 bits (217), Expect = 1e-017
Identities = 39/89 (43%), Positives = 57/89 (64%)
Frame = -3
Query: 1404 TKSMESDQGKLFIGGISWDTDENLLREYFTNYGEVSQVTVMREKATSRPRGFGLVSFSDP 1225
+ S S GKLF+GG+SW+T YF +GEV +M ++ T PRGFG V+F+D
Sbjct: 58 SSSSMSSPGKLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADS 117
Query: 1224 AVIDRVLQSKHHIDNRDVDVKRAMSREEQ 1138
AV ++VL+ H ID+R VD+KR + R ++
Sbjct: 118 AVAEKVLEEDHVIDDRKVDLKRTLPRGDK 146
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,715,832,898
Number of Sequences: 33410
Number of Extensions: 4715832898
Number of Successful Extensions: 173990963
Number of sequences better than 0.0: 0
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