BLASTX 7.6.2
Query= UN08188 /QuerySize=1744
(1743 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G28280.1 | Symbols: | VQ motif-containing pro... 404 8e-113
TAIR9_protein||AT1G28280.2 | Symbols: | VQ motif-containing pro... 396 4e-110
TAIR9_protein||AT2G33780.1 | Symbols: | VQ motif-containing pro... 173 5e-043
TAIR9_protein||AT1G51520.1 | Symbols: | nucleic acid binding / ... 165 9e-041
TAIR9_protein||AT1G51520.2 | Symbols: | nucleic acid binding / ... 165 9e-041
TAIR9_protein||AT3G21100.1 | Symbols: | RNA binding / nucleic a... 144 2e-034
TAIR9_protein||AT3G21100.2 | Symbols: | RNA binding / nucleic a... 144 2e-034
TAIR9_protein||AT5G12440.1 | Symbols: | nucleic acid binding / ... 140 3e-033
TAIR9_protein||AT3G51950.1 | Symbols: | zinc finger (CCCH-type)... 112 9e-025
TAIR9_protein||AT3G51950.2 | Symbols: | zinc finger (CCCH-type)... 112 9e-025
TAIR9_protein||AT3G63450.1 | Symbols: | RNA binding / nucleic a... 109 6e-024
TAIR9_protein||AT3G63450.2 | Symbols: | RNA binding / nucleic a... 109 6e-024
TAIR9_protein||AT2G05160.1 | Symbols: | zinc finger (CCCH-type)... 101 2e-021
TAIR9_protein||AT3G15300.1 | Symbols: | VQ motif-containing pro... 101 2e-021
TAIR9_protein||AT5G53830.1 | Symbols: | VQ motif-containing pro... 91 2e-018
TAIR9_protein||AT3G52980.1 | Symbols: | RNA recognition motif (... 62 8e-010
TAIR9_protein||AT5G08480.1 | Symbols: | VQ motif-containing pro... 59 9e-009
TAIR9_protein||AT5G08480.2 | Symbols: | VQ motif-containing pro... 57 3e-008
>TAIR9_protein||AT1G28280.1 | Symbols: | VQ motif-containing protein |
chr1:9886652-9887395 REVERSE
Length = 248
Score = 404 bits (1038), Expect = 8e-113
Identities = 214/253 (84%), Positives = 231/253 (91%), Gaps = 13/253 (5%)
Frame = -1
Query: 1686 MENSPRYRDASTNLIPSPRCHN-NSSCSMNSSTDSHNNKPPITPTRHVTTRSESGNPYPT 1510
MENSPRYR+A TNLIPSPRCHN N+SC M+SS++S NKPP TPTRHVTTRSESGNPYPT
Sbjct: 1 MENSPRYREA-TNLIPSPRCHNSNNSCGMSSSSES--NKPPTTPTRHVTTRSESGNPYPT 57
Query: 1509 TFVQADTSSFKQVVQMLTGSSDRPKQHNTSSLKPNPA-HQPDPRSSPSQFSIPAIKAV-N 1336
TFVQADTSSFKQVVQMLTGS++RPK + SSLKPNP HQPDPRS+PS FSIP IKAV N
Sbjct: 58 TFVQADTSSFKQVVQMLTGSAERPK--HGSSLKPNPTHHQPDPRSTPSSFSIPPIKAVPN 115
Query: 1335 KKQSSSSSSGFRLYERRNSMKNLKINPLDPVFNPV---FSPRKPEILSPSILDFPSLVLS 1165
KKQSSSS+SGFRLYERRNSMKNLKINPL+PVFNPV FSPRKPEILSPSILDFPSLVLS
Sbjct: 116 KKQSSSSASGFRLYERRNSMKNLKINPLNPVFNPVNSAFSPRKPEILSPSILDFPSLVLS 175
Query: 1164 PVTPLIPDPFDRSGSSSQSPDD--AEEKAMKEKGFYLHPSPATTPMDSEPRLLPLFPVTS 991
PVTPLIPDPFDRSGSS+QSP++ AEEKAMKE+GFYLHPSPATTPMD EPRLLPLFPVTS
Sbjct: 176 PVTPLIPDPFDRSGSSNQSPNELAAEEKAMKERGFYLHPSPATTPMDPEPRLLPLFPVTS 235
Query: 990 PRVSGSSTDSSS* 952
PRVSGSS+ S+S*
Sbjct: 236 PRVSGSSSASTS* 248
>TAIR9_protein||AT1G28280.2 | Symbols: | VQ motif-containing protein |
chr1:9886297-9887395 REVERSE
Length = 244
Score = 396 bits (1015), Expect = 4e-110
Identities = 209/244 (85%), Positives = 224/244 (91%), Gaps = 13/244 (5%)
Frame = -1
Query: 1686 MENSPRYRDASTNLIPSPRCHN-NSSCSMNSSTDSHNNKPPITPTRHVTTRSESGNPYPT 1510
MENSPRYR+A TNLIPSPRCHN N+SC M+SS++S NKPP TPTRHVTTRSESGNPYPT
Sbjct: 1 MENSPRYREA-TNLIPSPRCHNSNNSCGMSSSSES--NKPPTTPTRHVTTRSESGNPYPT 57
Query: 1509 TFVQADTSSFKQVVQMLTGSSDRPKQHNTSSLKPNPA-HQPDPRSSPSQFSIPAIKAV-N 1336
TFVQADTSSFKQVVQMLTGS++RPK + SSLKPNP HQPDPRS+PS FSIP IKAV N
Sbjct: 58 TFVQADTSSFKQVVQMLTGSAERPK--HGSSLKPNPTHHQPDPRSTPSSFSIPPIKAVPN 115
Query: 1335 KKQSSSSSSGFRLYERRNSMKNLKINPLDPVFNPV---FSPRKPEILSPSILDFPSLVLS 1165
KKQSSSS+SGFRLYERRNSMKNLKINPL+PVFNPV FSPRKPEILSPSILDFPSLVLS
Sbjct: 116 KKQSSSSASGFRLYERRNSMKNLKINPLNPVFNPVNSAFSPRKPEILSPSILDFPSLVLS 175
Query: 1164 PVTPLIPDPFDRSGSSSQSPDD--AEEKAMKEKGFYLHPSPATTPMDSEPRLLPLFPVTS 991
PVTPLIPDPFDRSGSS+QSP++ AEEKAMKE+GFYLHPSPATTPMD EPRLLPLFPVTS
Sbjct: 176 PVTPLIPDPFDRSGSSNQSPNELAAEEKAMKERGFYLHPSPATTPMDPEPRLLPLFPVTS 235
Query: 990 PRVS 979
PRVS
Sbjct: 236 PRVS 239
>TAIR9_protein||AT2G33780.1 | Symbols: | VQ motif-containing protein |
chr2:14291117-14291731 REVERSE
Length = 205
Score = 173 bits (436), Expect = 5e-043
Identities = 107/192 (55%), Positives = 125/192 (65%), Gaps = 34/192 (17%)
Frame = -1
Query: 1542 TRSESGNPYPTTFVQADTSSFKQVVQMLTGSSDRPKQHNTSSLKPNPAHQPDPRSSPSQF 1363
TR + Y TTF++ D SSFKQVVQ+LTG + NP HQPDPR P
Sbjct: 26 TRYVKDDMYETTFIRTDPSSFKQVVQLLTG------------IPKNPTHQPDPRFPPFH- 72
Query: 1362 SIPAIKAV-NKKQSSSSSSGFRLYERRNSMKN-LKINPLDPVFNPVFSPRKPEILSPSIL 1189
SIP IKAV NKKQSSS FRL ERRNSMK+ L INP PEIL+P+IL
Sbjct: 73 SIPPIKAVTNKKQSSS----FRLSERRNSMKHYLNINPT--------HSGPPEILTPTIL 120
Query: 1188 DFPSLVLSPVTPLIPDPFDRSGSSSQSP-------DDAEEKAMKEKGFYLHPSPATTPMD 1030
+FP+L LSP TPL+ DPF R GS SQSP DD +E+++KEKGFYL PSP+TTP D
Sbjct: 121 NFPALDLSPDTPLMSDPFYRPGSFSQSPSDSKPSFDDDQERSIKEKGFYLRPSPSTTPRD 180
Query: 1029 SEPRLLPLFPVT 994
+EPRLL LFP+T
Sbjct: 181 TEPRLLSLFPMT 192
>TAIR9_protein||AT1G51520.1 | Symbols: | nucleic acid binding / nucleotide
binding | chr1:19106789-19108533 FORWARD
Length = 415
Score = 165 bits (417), Expect = 9e-041
Identities = 86/106 (81%), Positives = 91/106 (85%), Gaps = 5/106 (4%)
Frame = -1
Query: 504 SDEDVSTYFSDFGTVEDVRIPYQQQRMYGFATFANAETVRTILARGNPHFICDSRVLVKP 325
+DEDVSTYF DFG V+DVRIPYQQQRMYGF TFA AETVRTILARGNPHFICDSRVLVKP
Sbjct: 279 TDEDVSTYFRDFGLVDDVRIPYQQQRMYGFVTFAKAETVRTILARGNPHFICDSRVLVKP 338
Query: 324 YKEKGNILQNRRQQKQLQELMERGNYSTFSS-SGMD---LYECHLG 199
YKEKG ILQ +RQQ+QL EL+ERGNYS SS SG D LYEC LG
Sbjct: 339 YKEKGKILQ-KRQQQQLHELLERGNYSPSSSPSGKDSRELYECRLG 383
>TAIR9_protein||AT1G51520.2 | Symbols: | nucleic acid binding / nucleotide
binding | chr1:19106789-19109093 FORWARD
Length = 514
Score = 165 bits (417), Expect = 9e-041
Identities = 86/106 (81%), Positives = 91/106 (85%), Gaps = 5/106 (4%)
Frame = -1
Query: 504 SDEDVSTYFSDFGTVEDVRIPYQQQRMYGFATFANAETVRTILARGNPHFICDSRVLVKP 325
+DEDVSTYF DFG V+DVRIPYQQQRMYGF TFA AETVRTILARGNPHFICDSRVLVKP
Sbjct: 279 TDEDVSTYFRDFGLVDDVRIPYQQQRMYGFVTFAKAETVRTILARGNPHFICDSRVLVKP 338
Query: 324 YKEKGNILQNRRQQKQLQELMERGNYSTFSS-SGMD---LYECHLG 199
YKEKG ILQ +RQQ+QL EL+ERGNYS SS SG D LYEC LG
Sbjct: 339 YKEKGKILQ-KRQQQQLHELLERGNYSPSSSPSGKDSRELYECRLG 383
>TAIR9_protein||AT3G21100.1 | Symbols: | RNA binding / nucleic acid binding /
nucleotide binding | chr3:7400426-7401870 FORWARD
Length = 297
Score = 144 bits (363), Expect = 2e-034
Identities = 74/105 (70%), Positives = 88/105 (83%), Gaps = 5/105 (4%)
Frame = -1
Query: 504 SDEDVSTYFSDFGTVEDVRIPYQQQRMYGFATFANAETVRTILARGNPHFICDSRVLVKP 325
+DEDVS YF +FG V+DVRIPYQQ+RM+GF TF ++ETVR ILARGNPHFICDSRVLVKP
Sbjct: 25 TDEDVSNYFGNFGPVQDVRIPYQQKRMFGFVTFLHSETVRIILARGNPHFICDSRVLVKP 84
Query: 324 YKEKGNILQNRRQQKQLQELMERGNYSTFSS-SGM---DLYECHL 202
YKEKG IL+ R+QQ+ LQ+ MERGN+S SS SGM DL++ HL
Sbjct: 85 YKEKGRILEKRQQQQLLQQ-MERGNFSPGSSPSGMDSRDLFDSHL 128
>TAIR9_protein||AT3G21100.2 | Symbols: | RNA binding / nucleic acid binding /
nucleotide binding | chr3:7399162-7401870 FORWARD
Length = 603
Score = 144 bits (363), Expect = 2e-034
Identities = 74/105 (70%), Positives = 88/105 (83%), Gaps = 5/105 (4%)
Frame = -1
Query: 504 SDEDVSTYFSDFGTVEDVRIPYQQQRMYGFATFANAETVRTILARGNPHFICDSRVLVKP 325
+DEDVS YF +FG V+DVRIPYQQ+RM+GF TF ++ETVR ILARGNPHFICDSRVLVKP
Sbjct: 331 TDEDVSNYFGNFGPVQDVRIPYQQKRMFGFVTFLHSETVRIILARGNPHFICDSRVLVKP 390
Query: 324 YKEKGNILQNRRQQKQLQELMERGNYSTFSS-SGM---DLYECHL 202
YKEKG IL+ R+QQ+ LQ+ MERGN+S SS SGM DL++ HL
Sbjct: 391 YKEKGRILEKRQQQQLLQQ-MERGNFSPGSSPSGMDSRDLFDSHL 434
>TAIR9_protein||AT5G12440.1 | Symbols: | nucleic acid binding / nucleotide
binding / zinc ion binding | chr5:4035891-4038604 REVERSE
Length = 651
Score = 140 bits (352), Expect = 3e-033
Identities = 72/105 (68%), Positives = 88/105 (83%), Gaps = 5/105 (4%)
Frame = -1
Query: 501 DEDVSTYFSDFGTVEDVRIPYQQQRMYGFATFANAETVRTILARGNPHFICDSRVLVKPY 322
DEDV+TYFS FGTV+DVRIPYQQ+RM+GF +FA+ ETV+ +LARGNPHFICDSRVLVKPY
Sbjct: 371 DEDVATYFSLFGTVQDVRIPYQQKRMFGFVSFAHPETVKVVLARGNPHFICDSRVLVKPY 430
Query: 321 KEKGNILQNRRQQKQLQELMERGNYSTFSS-SGMDLYE---CHLG 199
KEKG +L +++QQ+ LQ+ +ERGNYS SS SG+D E HLG
Sbjct: 431 KEKGKVL-DKKQQQLLQQQIERGNYSPCSSPSGIDPREQSDFHLG 474
>TAIR9_protein||AT3G51950.1 | Symbols: | zinc finger (CCCH-type) family protein
/ RNA recognition motif (RRM)-containing protein |
chr3:19278244-19280407 REVERSE
Length = 541
Score = 112 bits (279), Expect = 9e-025
Identities = 54/84 (64%), Positives = 64/84 (76%), Gaps = 1/84 (1%)
Frame = -1
Query: 501 DEDVSTYFSDFGTVEDVRIPYQQQRMYGFATFANAETVRTILARGNPHFICDSRVLVKPY 322
+EDVS YFS FG V+DVRIPYQQ+RM+GF TF ETV++ILA+GNPHF+CDSRVLVKPY
Sbjct: 272 EEDVSNYFSTFGPVQDVRIPYQQKRMFGFVTFVYPETVKSILAKGNPHFVCDSRVLVKPY 331
Query: 321 KEKGNILQN-RRQQKQLQELMERG 253
KEKG + R Q +EL G
Sbjct: 332 KEKGKVPDKYRTNQTTERELSPTG 355
>TAIR9_protein||AT3G51950.2 | Symbols: | zinc finger (CCCH-type) family protein
/ RNA recognition motif (RRM)-containing protein |
chr3:19278244-19280407 REVERSE
Length = 541
Score = 112 bits (279), Expect = 9e-025
Identities = 54/84 (64%), Positives = 64/84 (76%), Gaps = 1/84 (1%)
Frame = -1
Query: 501 DEDVSTYFSDFGTVEDVRIPYQQQRMYGFATFANAETVRTILARGNPHFICDSRVLVKPY 322
+EDVS YFS FG V+DVRIPYQQ+RM+GF TF ETV++ILA+GNPHF+CDSRVLVKPY
Sbjct: 272 EEDVSNYFSTFGPVQDVRIPYQQKRMFGFVTFVYPETVKSILAKGNPHFVCDSRVLVKPY 331
Query: 321 KEKGNILQN-RRQQKQLQELMERG 253
KEKG + R Q +EL G
Sbjct: 332 KEKGKVPDKYRTNQTTERELSPTG 355
>TAIR9_protein||AT3G63450.1 | Symbols: | RNA binding / nucleic acid binding /
nucleotide binding | chr3:23427191-23428864 REVERSE
Length = 405
Score = 109 bits (272), Expect = 6e-024
Identities = 49/83 (59%), Positives = 62/83 (74%)
Frame = -1
Query: 501 DEDVSTYFSDFGTVEDVRIPYQQQRMYGFATFANAETVRTILARGNPHFICDSRVLVKPY 322
+EDVS YFS FG V+DVRIPYQQ+RM+GF TF ETV++ILA+GNPHF+C SRVLVKPY
Sbjct: 169 EEDVSDYFSTFGPVQDVRIPYQQKRMFGFVTFMYPETVKSILAKGNPHFVCHSRVLVKPY 228
Query: 321 KEKGNILQNRRQQKQLQELMERG 253
KEKG + + + + + G
Sbjct: 229 KEKGKVPDKTKPSRDIMDFQLGG 251
>TAIR9_protein||AT3G63450.2 | Symbols: | RNA binding / nucleic acid binding /
nucleotide binding | chr3:23427191-23428864 REVERSE
Length = 405
Score = 109 bits (272), Expect = 6e-024
Identities = 49/83 (59%), Positives = 62/83 (74%)
Frame = -1
Query: 501 DEDVSTYFSDFGTVEDVRIPYQQQRMYGFATFANAETVRTILARGNPHFICDSRVLVKPY 322
+EDVS YFS FG V+DVRIPYQQ+RM+GF TF ETV++ILA+GNPHF+C SRVLVKPY
Sbjct: 169 EEDVSDYFSTFGPVQDVRIPYQQKRMFGFVTFMYPETVKSILAKGNPHFVCHSRVLVKPY 228
Query: 321 KEKGNILQNRRQQKQLQELMERG 253
KEKG + + + + + G
Sbjct: 229 KEKGKVPDKTKPSRDIMDFQLGG 251
>TAIR9_protein||AT2G05160.1 | Symbols: | zinc finger (CCCH-type) family protein
/ RNA recognition motif (RRM)-containing protein | chr2:1859011-1860931
REVERSE
Length = 537
Score = 101 bits (251), Expect = 2e-021
Identities = 45/64 (70%), Positives = 57/64 (89%)
Frame = -1
Query: 504 SDEDVSTYFSDFGTVEDVRIPYQQQRMYGFATFANAETVRTILARGNPHFICDSRVLVKP 325
++ DVS YF+ +G VEDVRIP QQ+RMYGF TFA++ETV+ ILA+GNPHFIC++RVLVKP
Sbjct: 330 TEHDVSIYFTSYGHVEDVRIPCQQKRMYGFVTFASSETVKHILAKGNPHFICNARVLVKP 389
Query: 324 YKEK 313
Y+EK
Sbjct: 390 YREK 393
>TAIR9_protein||AT3G15300.1 | Symbols: | VQ motif-containing protein |
chr3:5147551-5148210 REVERSE
Length = 220
Score = 101 bits (250), Expect = 2e-021
Identities = 56/95 (58%), Positives = 65/95 (68%), Gaps = 13/95 (13%)
Frame = -1
Query: 1239 NPVFSPRKPEILSPSILDFPSLVL-SPVTPLIP-------DPFDRSGSSSQSPDDAEEKA 1084
+P FSPR EILSPS LDFP L L SPVTPL DPFD+ SP EE+
Sbjct: 127 SPRFSPRNQEILSPSCLDFPKLALNSPVTPLKQGTNGNEGDPFDK-----MSPLSEEERG 181
Query: 1083 MKEKGFYLHPSPATTPMDSEPRLLPLFPVTSPRVS 979
+ +KG+YLH SP +TP DSEP+LLPLFPVTSPR+S
Sbjct: 182 IADKGYYLHRSPISTPRDSEPQLLPLFPVTSPRLS 216
>TAIR9_protein||AT5G53830.1 | Symbols: | VQ motif-containing protein |
chr5:21857057-21857788 FORWARD
Length = 244
Score = 91 bits (225), Expect = 2e-018
Identities = 52/91 (57%), Positives = 61/91 (67%), Gaps = 4/91 (4%)
Frame = -1
Query: 1248 PVFNPVFSPRKPEI-LSPSILDFPSLVL-SPVTPL--IPDPFDRSGSSSQSPDDAEEKAM 1081
P F+P S I LSPS+LDFP L L SPVTPL DPF++S S E+KA+
Sbjct: 149 PRFSPRNSSSSENILLSPSMLDFPKLGLNSPVTPLRSNDDPFNKSSPLSLGNSSEEDKAI 208
Query: 1080 KEKGFYLHPSPATTPMDSEPRLLPLFPVTSP 988
+KGFYLHPSP +TP DS+P LLPLFPV SP
Sbjct: 209 ADKGFYLHPSPVSTPRDSQPLLLPLFPVASP 239
Score = 67 bits (161), Expect = 4e-011
Identities = 40/81 (49%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Frame = -1
Query: 1575 KPPITPTRHVTTRSESGNPYPTTFVQADTSSFKQVVQMLTGSSDRPKQHNTSSLKPNPAH 1396
+P I H NPYPTTFVQADTS+FKQVVQMLTGSS +T++ K + A
Sbjct: 28 QPQIISPHHHDQHQHLSNPYPTTFVQADTSTFKQVVQMLTGSST-----DTTTGKHHEAP 82
Query: 1395 QP-DPRSSPSQFSIPAIKAVN 1336
P + + S FSIP IK N
Sbjct: 83 SPVNNNNKGSSFSIPPIKKTN 103
>TAIR9_protein||AT3G52980.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:19645660-19646962 FORWARD
Length = 382
Score = 62 bits (150), Expect = 8e-010
Identities = 29/45 (64%), Positives = 35/45 (77%)
Frame = -1
Query: 504 SDEDVSTYFSDFGTVEDVRIPYQQQRMYGFATFANAETVRTILAR 370
++ DVS YFS+ G VEDVRIP QQ+RMYGF TF ETV+ ILA+
Sbjct: 318 TEHDVSNYFSEVGPVEDVRIPCQQKRMYGFVTFVYMETVKRILAK 362
>TAIR9_protein||AT5G08480.1 | Symbols: | VQ motif-containing protein |
chr5:2744486-2745007 FORWARD
Length = 143
Score = 59 bits (141), Expect = 9e-009
Identities = 30/60 (50%), Positives = 38/60 (63%)
Frame = -1
Query: 1155 PLIPDPFDRSGSSSQSPDDAEEKAMKEKGFYLHPSPATTPMDSEPRLLPLFPVTSPRVSG 976
PL P + S + + EEKA+KE+ FYLHPSP + P +EP LL LFP+TSP SG
Sbjct: 81 PLSFKPTEGEPDSCTTNIEEEEKAIKERRFYLHPSPRSKPGYTEPELLTLFPLTSPNSSG 140
>TAIR9_protein||AT5G08480.2 | Symbols: | VQ motif-containing protein |
chr5:2744486-2745007 FORWARD
Length = 174
Score = 57 bits (136), Expect = 3e-008
Identities = 26/42 (61%), Positives = 32/42 (76%)
Frame = -1
Query: 1101 DAEEKAMKEKGFYLHPSPATTPMDSEPRLLPLFPVTSPRVSG 976
+ EEKA+KE+ FYLHPSP + P +EP LL LFP+TSP SG
Sbjct: 130 EEEEKAIKERRFYLHPSPRSKPGYTEPELLTLFPLTSPNSSG 171
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,715,832,898
Number of Sequences: 33410
Number of Extensions: 4715832898
Number of Successful Extensions: 173990963
Number of sequences better than 0.0: 0
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