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SwissProt blast output of UN08203


BLASTX 7.6.2

Query= UN08203 /QuerySize=1717
        (1716 letters)

Database: UniProt/SwissProt;
          518,415 sequences; 182,829,261 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|Q8LG95|PP332_ARATH Pentatricopeptide repeat-containing protei...    247   2e-064
sp|Q2V3H0|PP322_ARATH Pentatricopeptide repeat-containing protei...    127   3e-028
sp|Q7ZUP0|AN32A_DANRE Acidic leucine-rich nuclear phosphoprotein...     56   6e-007
sp|Q7M732|RTL1_MOUSE Retrotransposon-like protein 1 OS=Mus muscu...     54   2e-006

>sp|Q8LG95|PP332_ARATH Pentatricopeptide repeat-containing protein At4g21190
        OS=Arabidopsis thaliana GN=EMB1417 PE=2 SV=1

          Length = 307

 Score =  247 bits (630), Expect = 2e-064
 Identities = 123/133 (92%), Positives = 126/133 (94%)
 Frame = +1

Query:   4 RKRIGSISKSAKMIACIKELSNVKEEVYGALDSFIAWELEFPLVIVKKALAILEDEREWK 183
           RKRIG+ISK+AKMIACIK LSNVKEEVYGALDSFIAWELEFPLVIVKKAL ILEDE+EWK
Sbjct:  49 RKRIGTISKAAKMIACIKGLSNVKEEVYGALDSFIAWELEFPLVIVKKALVILEDEKEWK 108

Query: 184 KIIQVTKWMLSKGQGRTMGTYLSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKFFNKM 363
           KIIQVTKWMLSKGQGRTMGTY SLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKFFNKM
Sbjct: 109 KIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKFFNKM 168

Query: 364 ISIYYKRHAPQTL 402
           ISIYYKR   Q L
Sbjct: 169 ISIYYKRDMHQKL 181


 Score =  206 bits (522), Expect = 6e-052
 Identities = 108/142 (76%), Positives = 117/142 (82%), Gaps = 9/142 (6%)
 Frame = +2

Query: 365 SLSITRDMHHKLFEVFADMEELGVKPNTTIVDMVGKVFLKLGMNDKYEKLMKKYPPPQWE 544
           S+   RDMH KLFEVFADMEELGVKPN  IV MVGKVF+KL M DKYEKLMKKYPPPQWE
Sbjct: 170 SIYYKRDMHQKLFEVFADMEELGVKPNVAIVSMVGKVFVKLEMKDKYEKLMKKYPPPQWE 229

Query: 545 FRYIKGRRVKVKAKQLNELSEGEGGLSSDEDKIESKFDMLSVEEANQDGDDFSEEEE--- 715
           FRYIKGRRVKVKAKQLNELSEGEGGLSSDEDKI+++     +E   +DG+D SEEEE   
Sbjct: 230 FRYIKGRRVKVKAKQLNELSEGEGGLSSDEDKIDNE-----IESEEEDGEDLSEEEEDEK 284

Query: 716 EGLGGNQRQIGTSREPCLDHLD 781
           E LGG+Q QI TSREP LDHLD
Sbjct: 285 ELLGGSQGQI-TSREPSLDHLD 305

>sp|Q2V3H0|PP322_ARATH Pentatricopeptide repeat-containing protein At4g18975,
        chloroplastic OS=Arabidopsis thaliana GN=At4g18975 PE=2 SV=2

          Length = 287

 Score =  127 bits (318), Expect = 3e-028
 Identities = 59/120 (49%), Positives = 78/120 (65%)
 Frame = +1

Query:  16 GSISKSAKMIACIKELSNVKEEVYGALDSFIAWELEFPLVIVKKALAILEDEREWKKIIQ 195
           GS  K+  ++  +  L N KE VYGAL+ ++AWE+EFP++   KAL IL    +W ++IQ
Sbjct:  93 GSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFPIIAAAKALQILRKRSQWHRVIQ 152

Query: 196 VTKWMLSKGQGRTMGTYLSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKFFNKMISIY 375
           + KWMLSKGQG TMGTY  LL A   D R DEAE LWN +   H    PR+ F +MI++Y
Sbjct: 153 LAKWMLSKGQGATMGTYDILLLAFDMDERADEAESLWNMILHTHTRSIPRRLFARMIALY 212

>sp|Q7ZUP0|AN32A_DANRE Acidic leucine-rich nuclear phosphoprotein 32 family
        member A OS=Danio rerio GN=anp32a PE=2 SV=1

          Length = 254

 Score =  56 bits (134), Expect = 6e-007
 Identities = 27/64 (42%), Positives = 39/64 (60%)
 Frame = -3

Query: 1243 KRTRDVDGEAAGEGMEDEEEEEDEIEEEDYESEYSEDEEDKKRGSKKKVNKKESSSEESG 1064
            K   D D EA  EG++DE++EEDE EEEDY+ + +  EED++ G +    + E   EE  
Sbjct:  153 KEAPDSDAEAYVEGLDDEDDEEDEGEEEDYDEDAAPGEEDEEEGEEDDEEEGEEEEEEDI 212

Query: 1063 SDED 1052
            S E+
Sbjct:  213 SGEE 216

>sp|Q7M732|RTL1_MOUSE Retrotransposon-like protein 1 OS=Mus musculus GN=Rtl1
        PE=2 SV=1

          Length = 1744

 Score =  54 bits (129), Expect = 2e-006
 Identities = 25/58 (43%), Positives = 38/58 (65%)
 Frame = -3

Query: 1225 DGEAAGEGMEDEEEEEDEIEEEDYESEYSEDEEDKKRGSKKKVNKKESSSEESGSDED 1052
            +GE   EG E+EEEEEDE EEE+ E E  E+EE+++   +++  ++E   EE   +ED
Sbjct: 1377 EGEEEEEGEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEEEDEEEED 1434

  Database: UniProt/SwissProt
    Posted date:  Sat Aug 07 14:36:18 2010
  Number of letters in database: 182,829,261
  Number of sequences in database:  518,415

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,733,448,049
Number of Sequences: 518415
Number of Extensions: 32733448049
Number of Successful Extensions: 231167770
Number of sequences better than 0.0: 0