BLASTX 7.6.2
Query= UN08203 /QuerySize=1717
(1716 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8LG95|PP332_ARATH Pentatricopeptide repeat-containing protei... 247 2e-064
sp|Q2V3H0|PP322_ARATH Pentatricopeptide repeat-containing protei... 127 3e-028
sp|Q7ZUP0|AN32A_DANRE Acidic leucine-rich nuclear phosphoprotein... 56 6e-007
sp|Q7M732|RTL1_MOUSE Retrotransposon-like protein 1 OS=Mus muscu... 54 2e-006
>sp|Q8LG95|PP332_ARATH Pentatricopeptide repeat-containing protein At4g21190
OS=Arabidopsis thaliana GN=EMB1417 PE=2 SV=1
Length = 307
Score = 247 bits (630), Expect = 2e-064
Identities = 123/133 (92%), Positives = 126/133 (94%)
Frame = +1
Query: 4 RKRIGSISKSAKMIACIKELSNVKEEVYGALDSFIAWELEFPLVIVKKALAILEDEREWK 183
RKRIG+ISK+AKMIACIK LSNVKEEVYGALDSFIAWELEFPLVIVKKAL ILEDE+EWK
Sbjct: 49 RKRIGTISKAAKMIACIKGLSNVKEEVYGALDSFIAWELEFPLVIVKKALVILEDEKEWK 108
Query: 184 KIIQVTKWMLSKGQGRTMGTYLSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKFFNKM 363
KIIQVTKWMLSKGQGRTMGTY SLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKFFNKM
Sbjct: 109 KIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKFFNKM 168
Query: 364 ISIYYKRHAPQTL 402
ISIYYKR Q L
Sbjct: 169 ISIYYKRDMHQKL 181
Score = 206 bits (522), Expect = 6e-052
Identities = 108/142 (76%), Positives = 117/142 (82%), Gaps = 9/142 (6%)
Frame = +2
Query: 365 SLSITRDMHHKLFEVFADMEELGVKPNTTIVDMVGKVFLKLGMNDKYEKLMKKYPPPQWE 544
S+ RDMH KLFEVFADMEELGVKPN IV MVGKVF+KL M DKYEKLMKKYPPPQWE
Sbjct: 170 SIYYKRDMHQKLFEVFADMEELGVKPNVAIVSMVGKVFVKLEMKDKYEKLMKKYPPPQWE 229
Query: 545 FRYIKGRRVKVKAKQLNELSEGEGGLSSDEDKIESKFDMLSVEEANQDGDDFSEEEE--- 715
FRYIKGRRVKVKAKQLNELSEGEGGLSSDEDKI+++ +E +DG+D SEEEE
Sbjct: 230 FRYIKGRRVKVKAKQLNELSEGEGGLSSDEDKIDNE-----IESEEEDGEDLSEEEEDEK 284
Query: 716 EGLGGNQRQIGTSREPCLDHLD 781
E LGG+Q QI TSREP LDHLD
Sbjct: 285 ELLGGSQGQI-TSREPSLDHLD 305
>sp|Q2V3H0|PP322_ARATH Pentatricopeptide repeat-containing protein At4g18975,
chloroplastic OS=Arabidopsis thaliana GN=At4g18975 PE=2 SV=2
Length = 287
Score = 127 bits (318), Expect = 3e-028
Identities = 59/120 (49%), Positives = 78/120 (65%)
Frame = +1
Query: 16 GSISKSAKMIACIKELSNVKEEVYGALDSFIAWELEFPLVIVKKALAILEDEREWKKIIQ 195
GS K+ ++ + L N KE VYGAL+ ++AWE+EFP++ KAL IL +W ++IQ
Sbjct: 93 GSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFPIIAAAKALQILRKRSQWHRVIQ 152
Query: 196 VTKWMLSKGQGRTMGTYLSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKFFNKMISIY 375
+ KWMLSKGQG TMGTY LL A D R DEAE LWN + H PR+ F +MI++Y
Sbjct: 153 LAKWMLSKGQGATMGTYDILLLAFDMDERADEAESLWNMILHTHTRSIPRRLFARMIALY 212
>sp|Q7ZUP0|AN32A_DANRE Acidic leucine-rich nuclear phosphoprotein 32 family
member A OS=Danio rerio GN=anp32a PE=2 SV=1
Length = 254
Score = 56 bits (134), Expect = 6e-007
Identities = 27/64 (42%), Positives = 39/64 (60%)
Frame = -3
Query: 1243 KRTRDVDGEAAGEGMEDEEEEEDEIEEEDYESEYSEDEEDKKRGSKKKVNKKESSSEESG 1064
K D D EA EG++DE++EEDE EEEDY+ + + EED++ G + + E EE
Sbjct: 153 KEAPDSDAEAYVEGLDDEDDEEDEGEEEDYDEDAAPGEEDEEEGEEDDEEEGEEEEEEDI 212
Query: 1063 SDED 1052
S E+
Sbjct: 213 SGEE 216
>sp|Q7M732|RTL1_MOUSE Retrotransposon-like protein 1 OS=Mus musculus GN=Rtl1
PE=2 SV=1
Length = 1744
Score = 54 bits (129), Expect = 2e-006
Identities = 25/58 (43%), Positives = 38/58 (65%)
Frame = -3
Query: 1225 DGEAAGEGMEDEEEEEDEIEEEDYESEYSEDEEDKKRGSKKKVNKKESSSEESGSDED 1052
+GE EG E+EEEEEDE EEE+ E E E+EE+++ +++ ++E EE +ED
Sbjct: 1377 EGEEEEEGEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEEEDEEEED 1434
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,733,448,049
Number of Sequences: 518415
Number of Extensions: 32733448049
Number of Successful Extensions: 231167770
Number of sequences better than 0.0: 0
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