BLASTX 7.6.2
Query= UN08234 /QuerySize=1620
(1619 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297840349|ref|XP_002888056.1| hypothetical protein ARALYDRAFT... 484 2e-134
gi|297840317|ref|XP_002888040.1| hypothetical protein ARALYDRAFT... 470 4e-130
gi|15220662|ref|NP_176388.1| Mitochondrial transcription termina... 468 1e-129
gi|297840343|ref|XP_002888053.1| hypothetical protein ARALYDRAFT... 462 1e-127
gi|15220664|ref|NP_176389.1| Mitochondrial transcription termina... 461 2e-127
gi|15220713|ref|NP_176403.1| Mitochondrial transcription termina... 453 5e-125
gi|2160138|gb|AAB60760.1| F19K23.6 gene product [Arabidopsis tha... 444 2e-122
gi|297840345|ref|XP_002888054.1| hypothetical protein ARALYDRAFT... 439 1e-120
gi|297840323|ref|XP_002888043.1| hypothetical protein ARALYDRAFT... 434 3e-119
gi|297840341|ref|XP_002888052.1| hypothetical protein ARALYDRAFT... 430 4e-118
gi|15220666|ref|NP_176390.1| Mitochondrial transcription termina... 421 2e-115
gi|15220672|ref|NP_176392.1| Mitochondrial transcription termina... 389 1e-105
gi|15220717|ref|NP_176406.1| Mitochondrial transcription termina... 352 1e-094
gi|297837213|ref|XP_002886488.1| hypothetical protein ARALYDRAFT... 350 6e-094
gi|297840327|ref|XP_002888045.1| hypothetical protein ARALYDRAFT... 310 4e-082
gi|2160140|gb|AAB60762.1| F19K23.9 gene product [Arabidopsis tha... 303 9e-080
>gi|297840349|ref|XP_002888056.1| hypothetical protein ARALYDRAFT_893300
[Arabidopsis lyrata subsp. lyrata]
Length = 427
Score = 484 bits (1245), Expect = 2e-134
Identities = 271/399 (67%), Positives = 312/399 (78%), Gaps = 12/399 (3%)
Frame = -3
Query: 1485 SSPSHSFSSASAAASDVSSLQVCRKGNNFTVSYLVDSFGFTTKLAESIWRKVS-SEAKAN 1309
S+ S+ FSSA A+ +DV SL RKG FTVSYLVDS G + KLAESI RKVS K N
Sbjct: 28 STFSNPFSSA-ASDADV-SLGDGRKGKTFTVSYLVDSLGLSKKLAESISRKVSFCSGKGN 85
Query: 1308 PDSVLNLLRSHGFTDSQISTVITNYPKLLTLDAEKTLAPNLKFLQSREGASTSELAEIVS 1129
PDSVL+LLRSHGFTD+QIST+ITNYP+LLTLDAEK+L P L+FLQSR GAS+SEL +IVS
Sbjct: 86 PDSVLSLLRSHGFTDTQISTIITNYPRLLTLDAEKSLGPKLQFLQSR-GASSSELTQIVS 144
Query: 1128 NVPRILGMRWHKAVGRYYDFVKDIIEADKCSNYEM---SFPHGTCQENIIRNVLALRRLG 958
VP+ILG R HK + RYYDFVK IIEADK S YE S P G+ QEN IRN+L LR LG
Sbjct: 145 TVPKILGKRGHKTISRYYDFVKVIIEADKSSKYEKLCHSLPQGSKQENKIRNLLVLRELG 204
Query: 957 VPQRFLFSLLTSNFHVVSGKQRFQESLKKVVGMGFDPTTSKFVRALCVVYQMSHKTTEEK 778
VPQR LFSLL SN HV GK+ F+ SL+KVV +GFDPTTS FV ALC VY MS KT EEK
Sbjct: 205 VPQRLLFSLLISNQHVCCGKEIFEVSLRKVVDLGFDPTTSTFVEALCTVYGMSDKTIEEK 264
Query: 777 VNLYRKLGFSTVDVWEIFKKNPLFLALSEKNIMNSFETFIGLGFSRDEFVTMVKHCPQCI 598
V++Y++LGF+ DVW +FKK PL LA SEK + NS ETF+GLGFSRD+FV +VK PQCI
Sbjct: 265 VDVYKRLGFAVEDVWAMFKKWPLSLANSEKKVANSIETFLGLGFSRDDFVRIVKRFPQCI 324
Query: 597 GLSAESVKKKTEFLVKEMNWSLKALVSNPAVFGYNLEKRTVPRCYVIKALMSKGLLG--- 427
GLSAE VKKKTEF+VK+MNW LKALVSNP V G ++EKR VPRC VIKAL+ K LLG
Sbjct: 325 GLSAELVKKKTEFVVKKMNWPLKALVSNPQVLGLSMEKRIVPRCNVIKALILKDLLGDTR 384
Query: 426 SELPPLSPVLAVTDEAFLTKYVMKHDDDKKLVAELMSIY 310
S+LPPL VL +TDE FL YV KH DDK+LVAELM+I+
Sbjct: 385 SKLPPLRYVL-ITDEKFLEMYVRKH-DDKQLVAELMAIF 421
>gi|297840317|ref|XP_002888040.1| hypothetical protein ARALYDRAFT_893280
[Arabidopsis lyrata subsp. lyrata]
Length = 386
Score = 470 bits (1208), Expect = 4e-130
Identities = 253/373 (67%), Positives = 289/373 (77%), Gaps = 6/373 (1%)
Frame = -3
Query: 1416 RKGNNFTVSYLVDSFGFTTKLAESIWRKVSSEAKANPDSVLNLLRSHGFTDSQISTVITN 1237
+K FTVSYLVDS G K+AESI RKVS E K NPDSVL+LLRSHGFTD+QIS++IT+
Sbjct: 3 KKVRTFTVSYLVDSLGLAKKVAESISRKVSFENKGNPDSVLSLLRSHGFTDTQISSIITD 62
Query: 1236 YPKLLTLDAEKTLAPNLKFLQSREGASTSELAEIVSNVPRILGMRWHKAVGRYYDFVKDI 1057
YP LL D E ++ P LKFLQSR GAS+SEL EIVS VPRILG R HK + RYYD VK+I
Sbjct: 63 YPLLLIADGENSIGPKLKFLQSR-GASSSELTEIVSKVPRILGKRGHKTISRYYDTVKEI 121
Query: 1056 IEADKCSNYEM---SFPHGTCQE-NIIRNVLALRRLGVPQRFLFSLLTSNFHVVSGKQRF 889
+EADK S +E S P G+ QE NI RNVL LR LGVPQR LFSLL S+ V GK+RF
Sbjct: 122 VEADKSSKFEKLCHSLPQGSKQENNIRRNVLVLRELGVPQRLLFSLLISDNGHVCGKKRF 181
Query: 888 QESLKKVVGMGFDPTTSKFVRALCVVYQMSHKTTEEKVNLYRKLGFSTVDVWEIFKKNPL 709
+ESL KVV MGFDPTT+ FVRAL V+ S KT EEKVNLY++LGF DVWE+FKK P
Sbjct: 182 EESLNKVVEMGFDPTTASFVRALHVIQGFSDKTIEEKVNLYKRLGFDVGDVWEMFKKFPT 241
Query: 708 FLALSEKNIMNSFETFIGLGFSRDEFVTMVKHCPQCIGLSAESVKKKTEFLVKEMNWSLK 529
FL LSEK I NS ETF+ L F+RDE V MVK P CIG SAESVKKKTEFLVK+MNW LK
Sbjct: 242 FLGLSEKKIANSIETFVSLRFTRDEIVVMVKRFPPCIGCSAESVKKKTEFLVKKMNWPLK 301
Query: 528 ALVSNPAVFGYNLEKRTVPRCYVIKALMSKGLLGSELPPLSPVLAVTDEAFLTKYVMKHD 349
A+ S P V GY+LEKRTVPRC VIK L+SKGLLGSELPPLS VL++TD AFL KYV+KH
Sbjct: 302 AVASFPQVIGYSLEKRTVPRCNVIKVLISKGLLGSELPPLSCVLSITDPAFLNKYVVKH- 360
Query: 348 DDKKLVAELMSIY 310
DD +LV EL++I+
Sbjct: 361 DDTQLVRELIAIF 373
>gi|15220662|ref|NP_176388.1| Mitochondrial transcription termination factor
family protein [Arabidopsis thaliana]
Length = 418
Score = 468 bits (1204), Expect = 1e-129
Identities = 256/396 (64%), Positives = 301/396 (76%), Gaps = 8/396 (2%)
Frame = -3
Query: 1485 SSPSHSFSSASAAASDVSSLQVCRKGNNFTVSYLVDSFGFTTKLAESIWRKVSSEAKANP 1306
S S+ FSSASAA S +V RKGNNFTVSYLVDS G TTKLAESI RKVS E K NP
Sbjct: 28 SPTSNFFSSASAAC---LSPRVGRKGNNFTVSYLVDSLGLTTKLAESISRKVSFEDKNNP 84
Query: 1305 DSVLNLLRSHGFTDSQISTVITNYPKLLTLDAEKTLAPNLKFLQSREGASTSELAEIVSN 1126
DSVLNLL SHGFT SQIST+I +YP+LL DAEK+L P L+FLQSR GAS+SE+ EIVS+
Sbjct: 85 DSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSR-GASSSEITEIVSS 143
Query: 1125 VPRILGMRWHKAVGRYYDFVKDIIEADKCSNYEM--SFPHGTCQENIIRNVLALRRLGVP 952
VP ILG + HK + YYDF+KD + N ++ S P G EN IRNV LR LG+P
Sbjct: 144 VPEILGKKGHKTISVYYDFIKDTLLEKSSKNEKLCHSLPQGNL-ENKIRNVSVLRELGMP 202
Query: 951 QRFLFSLLTSNFHVVSGKQRFQESLKKVVGMGFDPTTSKFVRALCVVYQMSHKTTEEKVN 772
+ LFSLL S+ V GK++F+E+LKKVV MGFDPTTSKFV AL V+Y+M+ KT EEKV+
Sbjct: 203 HKLLFSLLISDSQPVCGKEKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVH 262
Query: 771 LYRKLGFSTVDVWEIFKKNPLFLALSEKNIMNSFETFIGLGFSRDEFVTMVKHCPQCIGL 592
LY+ LGF DVW FKK P+ L +SEK +++S ETF+GLGFSRDEF MVKH P CIGL
Sbjct: 263 LYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGL 322
Query: 591 SAESVKKKTEFLVKEMNWSLKALVSNPAVFGYNLEKRTVPRCYVIKALMSKGLLGSELPP 412
S E+VKKKTEFLVK+MNW LKA+VSNPAVFGY+LEKR VPR VIKALMSKGL+ +ELP
Sbjct: 323 STETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPS 382
Query: 411 LSPVLAVTDEAFLTKYVMKHDDDKKLVAELMSIYRA 304
+S VL T + FL +YV H DK+LV ELM+IYRA
Sbjct: 383 ISCVLMCTKQVFLNRYVANH-VDKQLVTELMAIYRA 417
>gi|297840343|ref|XP_002888053.1| hypothetical protein ARALYDRAFT_475137
[Arabidopsis lyrata subsp. lyrata]
Length = 419
Score = 462 bits (1187), Expect = 1e-127
Identities = 250/394 (63%), Positives = 302/394 (76%), Gaps = 9/394 (2%)
Frame = -3
Query: 1476 SHSFSSASAAASDVSSLQVCRKGNNFTVSYLVDSFGFTTKLAESIWRKVSSEAKANPDSV 1297
S+SFSSA+ A +S +V RKGNNFTVSYLVDS G KLAESI RKVS E KANPDSV
Sbjct: 31 SNSFSSATVAR---TSSRVGRKGNNFTVSYLVDSLGLARKLAESISRKVSFEDKANPDSV 87
Query: 1296 LNLLRSHGFTDSQISTVITNYPKLLTLDAEKTLAPNLKFLQSREGASTSELAEIVSNVPR 1117
LNL RSHGFTDSQIS+++T+YP+LL DAEK+L P L+FLQSRE AS+SEL EIVS VP+
Sbjct: 88 LNLFRSHGFTDSQISSIVTDYPQLLIADAEKSLGPKLQFLQSRE-ASSSELTEIVSQVPK 146
Query: 1116 ILGMRWHKAVGRYYDFVKDIIEADKCSNYEM---SFPHGTCQENIIRNVLALRRLGVPQR 946
ILG R HK + YYDF+KD + DK S E SFP G EN IRN+ LR LG+P +
Sbjct: 147 ILGKRGHKTISVYYDFIKDTLLHDKSSKKEKSCHSFPQGNL-ENKIRNISVLRELGMPHK 205
Query: 945 FLFSLLTSNFHVVSGKQRFQESLKKVVGMGFDPTTSKFVRALCVVYQMSHKTTEEKVNLY 766
LF LL S V GK++F+ESLKKVV MGFDPT++KF+ AL VV ++S KT EEKVN Y
Sbjct: 206 LLFPLLISCDVPVFGKEKFEESLKKVVDMGFDPTSAKFLEALRVVQRLSDKTIEEKVNAY 265
Query: 765 RKLGFSTVDVWEIFKKNPLFLALSEKNIMNSFETFIGLGFSRDEFVTMVKHCPQCIGLSA 586
+LGF +VW +FK+ P FL SEK I+++ ETF+GLGF+RDEF +VK PQ IGLS
Sbjct: 266 ERLGFDVGNVWAVFKRWPNFLTHSEKKILSTIETFLGLGFTRDEFSMLVKRFPQGIGLSP 325
Query: 585 ESVKKKTEFLVKEMNWSLKALVSNPAVFGYNLEKRTVPRCYVIKALMSKGLLGSELPPLS 406
E+VKKKTEFLVK+MNW +KALVSNPA+ GY++EKRTVPR VIKAL+SKGL+GSELP +S
Sbjct: 326 ETVKKKTEFLVKKMNWPIKALVSNPAILGYSMEKRTVPRGNVIKALISKGLIGSELPSIS 385
Query: 405 PVLAVTDEAFLTKYVMKHDDDKKLVAELMSIYRA 304
V T++ FL +YV KH +DK+LV ELM+IYRA
Sbjct: 386 HVFICTNQVFLNRYVKKH-EDKQLVTELMAIYRA 418
>gi|15220664|ref|NP_176389.1| Mitochondrial transcription termination factor
family protein [Arabidopsis thaliana]
Length = 418
Score = 461 bits (1184), Expect = 2e-127
Identities = 258/416 (62%), Positives = 311/416 (74%), Gaps = 11/416 (2%)
Frame = -3
Query: 1539 RSVVNLLQIESAFPPIIFSSP-SHSFSSASAAASDVSSLQVCRKGNNFTVSYLVDSFGFT 1363
RS+V L + + +SP S+SFSSASAA S +V RKG +FTVSYLVDS G
Sbjct: 9 RSLVELQKWRHLRVLVQKASPLSNSFSSASAAR---LSPRVGRKGKSFTVSYLVDSLGLP 65
Query: 1362 TKLAESIWRKVSSEAKANPDSVLNLLRSHGFTDSQISTVITNYPKLLTLDAEKTLAPNLK 1183
KLAES+ RKVS E K NPDSVLNLLRSHGFTDSQIST++T+YP+LL DAEK+LAP L+
Sbjct: 66 KKLAESVSRKVSFEDKDNPDSVLNLLRSHGFTDSQISTIVTDYPQLLVADAEKSLAPKLQ 125
Query: 1182 FLQSREGASTSELAEIVSNVPRILGMRWHKAVGRYYDFVKDIIEADKCSNYEMS---FPH 1012
FLQSR GAS+SEL EIVS VP+ILG R HK + +YDF+K+ + DK S E S FP
Sbjct: 126 FLQSR-GASSSELTEIVSTVPKILGKRGHKTISVFYDFIKETL-LDKSSKSEKSCQPFPQ 183
Query: 1011 GTCQENIIRNVLALRRLGVPQRFLFSLLTSNFHVVSGKQRFQESLKKVVGMGFDPTTSKF 832
G EN IRN+ LR LG+P + LF LL S V GK++F+ESLKKVV MGFDP+TSKF
Sbjct: 184 GNL-ENKIRNLSVLRELGMPHKLLFPLLISCDVPVFGKEKFEESLKKVVEMGFDPSTSKF 242
Query: 831 VRALCVVYQMSHKTTEEKVNLYRKLGFSTVDVWEIFKKNPLFLALSEKNIMNSFETFIGL 652
V ALCVV ++S K E+KVN Y++LGF VW +FK+ P FL SEK I+N+ ETF+GL
Sbjct: 243 VEALCVVQRLSDKNIEDKVNAYKRLGFDVEYVWTVFKRWPNFLTHSEKKILNTIETFLGL 302
Query: 651 GFSRDEFVTMVKHCPQCIGLSAESVKKKTEFLVKEMNWSLKALVSNPAVFGYNLEKRTVP 472
GFSRDEF ++K PQ IGLSAE VKKKTEFLVK+MNW LKALVSNPAV GY+LEKRTVP
Sbjct: 303 GFSRDEFSVLIKRFPQGIGLSAEMVKKKTEFLVKKMNWPLKALVSNPAVLGYSLEKRTVP 362
Query: 471 RCYVIKALMSKGLLGSELPPLSPVLAVTDEAFLTKYVMKHDDDKKLVAELMSIYRA 304
R V++AL+SKGL+GSELP +S V TD+ FL +YV +H +DK+L ELM+IYRA
Sbjct: 363 RGNVVQALISKGLIGSELPSISRVFVCTDQVFLNRYVKRH-EDKQLETELMAIYRA 417
>gi|15220713|ref|NP_176403.1| Mitochondrial transcription termination factor
family protein [Arabidopsis thaliana]
Length = 437
Score = 453 bits (1164), Expect = 5e-125
Identities = 254/395 (64%), Positives = 298/395 (75%), Gaps = 7/395 (1%)
Frame = -3
Query: 1485 SSPSHSFSSASAAASDVSSLQVCRKGNNFTVSYLVDSFGFTTKLAESIWRKVSSEAKANP 1306
S+ S++FSS SA A+DVSS + RKG+NFTVSYLVDS G TK+AESI KVS + K NP
Sbjct: 31 SAFSNTFSS-SAIAADVSS-RDGRKGHNFTVSYLVDSLGLATKVAESISMKVSFDNKGNP 88
Query: 1305 DSVLNLLRSHGFTDSQISTVITNYPKLLTLDAEKTLAPNLKFLQSREGASTSELAEIVSN 1126
DSVL+LLRSHGFTDSQIS +I +P+LL LDAEK+LAP L+FLQS GAS+SEL E VS
Sbjct: 89 DSVLSLLRSHGFTDSQISNIIRTFPRLLILDAEKSLAPKLQFLQS-IGASSSELTETVSA 147
Query: 1125 VPRILGMRWHKAVGRYYDFVKDIIEADKCSNYEM---SFPHGTCQENIIRNVLALRRLGV 955
VP+ILG R K++ RYYDFVK IIEADK S E S P G+ QEN IRN+L LR +GV
Sbjct: 148 VPKILGKRKGKSLSRYYDFVKVIIEADKSSKLEKLCHSLPEGSKQENKIRNLLVLREMGV 207
Query: 954 PQRFLFSLLTSNFHVVSGKQRFQESLKKVVGMGFDPTTSKFVRALCVVYQMSHKTTEEKV 775
PQR LFSLL S+ V GK++F+ESLKK V +GFDPTT+ FV+AL V+Y +S K E K
Sbjct: 208 PQRLLFSLLISDAGDVCGKEKFKESLKKAVEIGFDPTTATFVKALNVLYGLSDKGIENKF 267
Query: 774 NLYRKLGFSTVDVWEIFKKNPLFLALSEKNIMNSFETFIGLGFSRDEFVTMVKHCPQCIG 595
N ++LG + DVW +FKK P L SEK I NS ETF+GLGFSRDEF+ MVK PQCIG
Sbjct: 268 NACKRLGLAVDDVWAMFKKWPNILTKSEKKIENSVETFLGLGFSRDEFLMMVKRFPQCIG 327
Query: 594 LSAESVKKKTEFLVKEMNWSLKALVSNPAVFGYNLEKRTVPRCYVIKALMSKGLLGSELP 415
S E +K KTEFLV EMNW LKA+ S P V GY+LEKRTVPRC VIK L+SKGLL SELP
Sbjct: 328 YSTELMKTKTEFLVTEMNWPLKAVASIPQVLGYSLEKRTVPRCNVIKVLISKGLLESELP 387
Query: 414 PLSPVLAVTDEAFLTKYVMKHDDDKKLVAELMSIY 310
P+S VL T E FL YV KH DDK+LVAELM+I+
Sbjct: 388 PISSVLTSTSEVFLYMYVRKH-DDKQLVAELMAIF 421
>gi|2160138|gb|AAB60760.1| F19K23.6 gene product [Arabidopsis thaliana]
Length = 827
Score = 444 bits (1141), Expect = 2e-122
Identities = 252/401 (62%), Positives = 294/401 (73%), Gaps = 14/401 (3%)
Frame = -3
Query: 1575 RKSLEFQKWRLLRSVVNLLQIESAFPPIIFSSPSHSFSSASAAASDVSSLQVCRKGNNFT 1396
RK ++ QKWR LR VNL Q SAF S++FSS SA A+DVSS + RKG+NFT
Sbjct: 9 RKLVQLQKWRHLRVSVNLFQNGSAF--------SNTFSS-SAIAADVSS-RDGRKGHNFT 58
Query: 1395 VSYLVDSFGFTTKLAESIWRKVSSEAKANPDSVLNLLRSHGFTDSQISTVITNYPKLLTL 1216
VSYLVDS G TK+AESI KVS + K NPDSVL+LLRSHGFTDSQIS +I +P+LL L
Sbjct: 59 VSYLVDSLGLATKVAESISMKVSFDNKGNPDSVLSLLRSHGFTDSQISNIIRTFPRLLIL 118
Query: 1215 DAEKTLAPNLKFLQSREGASTSELAEIVSNVPRILGMRWHKAVGRYYDFVKDIIEADKCS 1036
DAEK+LAP L+FLQS GAS+SEL E VS VP+ILG R K++ RYYDFVK IIEADK S
Sbjct: 119 DAEKSLAPKLQFLQS-IGASSSELTETVSAVPKILGKRKGKSLSRYYDFVKVIIEADKSS 177
Query: 1035 NYEM---SFPHGTCQENIIRNVLALRRLGVPQRFLFSLLTSNFHVVSGKQRFQESLKKVV 865
E S P G+ QEN IRN+L LR +GVPQR LFSLL S+ V GK++F+ESLKK V
Sbjct: 178 KLEKLCHSLPEGSKQENKIRNLLVLREMGVPQRLLFSLLISDAGDVCGKEKFKESLKKAV 237
Query: 864 GMGFDPTTSKFVRALCVVYQMSHKTTEEKVNLYRKLGFSTVDVWEIFKKNPLFLALSEKN 685
+GFDPTT+ FV+AL V+Y +S K E K N ++LG + DVW +FKK P L SEK
Sbjct: 238 EIGFDPTTATFVKALNVLYGLSDKGIENKFNACKRLGLAVDDVWAMFKKWPNILTKSEKK 297
Query: 684 IMNSFETFIGLGFSRDEFVTMVKHCPQCIGLSAESVKKKTEFLVKEMNWSLKALVSNPAV 505
I NS ETF+GLGFSRDEF+ MVK PQCIG S E +K KTEFLV EMNW LKA+ S P V
Sbjct: 298 IENSVETFLGLGFSRDEFLMMVKRFPQCIGYSTELMKTKTEFLVTEMNWPLKAVASIPQV 357
Query: 504 FGYNLEKRTVPRCYVIKALMSKGLLGSELPPLSPVLAVTDE 382
GY+LEKRTVPRC VIK L+SKGLL SELPP+S VL T E
Sbjct: 358 LGYSLEKRTVPRCNVIKVLISKGLLESELPPISSVLTSTSE 398
>gi|297840345|ref|XP_002888054.1| hypothetical protein ARALYDRAFT_893298
[Arabidopsis lyrata subsp. lyrata]
Length = 768
Score = 439 bits (1127), Expect = 1e-120
Identities = 245/376 (65%), Positives = 283/376 (75%), Gaps = 17/376 (4%)
Frame = -3
Query: 1470 SFSSASAAASDVSSLQVCRKGNNFTV--SYLVDSFGFTTKLAESIWRKVSSEAKANPDSV 1297
SFS A++ S + CRKG FT+ SYLVDS G T KLAESI SE KANP+SV
Sbjct: 21 SFSVQKASSFSTVSTKDCRKGEIFTISYSYLVDSLGLTRKLAESI-----SEGKANPESV 75
Query: 1296 LNLLRSHGFTDSQISTVITNYPKLLTLDAEKTLAPNLKFLQSREGASTSELAEIVSNVPR 1117
L+LL SHGFTDSQIS++IT YP+L LDA+K+LAP LKFLQSR GAS+SEL EIVS VP
Sbjct: 76 LSLLTSHGFTDSQISSIITIYPRLFLLDAKKSLAPKLKFLQSR-GASSSELTEIVSKVPE 134
Query: 1116 ILGMRWHKAVGRYYDFVKDIIEADKCSNYEM---SFPHGTCQENIIRNVLALRRLGVPQR 946
IL + K + RYYDFVK I+EADK SNY+ S P G EN IRN+ LR LGVPQR
Sbjct: 135 ILAKKGDKTLSRYYDFVKVIVEADKSSNYDKLCHSLPVGNL-ENKIRNISVLRELGVPQR 193
Query: 945 FLFSLLTSNFHVVSGKQRFQESLKKVVGMGFDPTTSKFVRALCVVYQMSHKTTEEKVNLY 766
LF LL S+ V+GK+RF ES+KK+V MGFDPTT+KFV+AL +V +S KT EEK NLY
Sbjct: 194 LLFPLLISSGGPVNGKERFGESIKKLVEMGFDPTTTKFVKALRIVQGLSAKTIEEKANLY 253
Query: 765 RKLGFSTVDVWEIFKKNPLFLALSEKNIMNSFETFIGLGFSRDEFVTMVKHCPQCIGLSA 586
+ LGF DVWEIF K P+FLALSEKNI+NS ETF+GLGFSRDEF MVK PQ IGLSA
Sbjct: 254 KSLGFD--DVWEIFNKYPIFLALSEKNILNSVETFLGLGFSRDEFANMVKSFPQGIGLSA 311
Query: 585 ESVKKKTEFLVKEMNWSLKALVSNPAVFGYNLEKRTVPRCYVIKALMSKGLL---GSELP 415
E+VKKKTEFLVK+MNW LKALV NPAV GYN+EKR VPRC VIKALMSKGLL GS+LP
Sbjct: 312 ETVKKKTEFLVKKMNWPLKALVLNPAVLGYNMEKRIVPRCNVIKALMSKGLLGDTGSKLP 371
Query: 414 PLSPVLAVTDEAFLTK 367
P+ VL T++ F +
Sbjct: 372 PIGSVLKSTNQVFFKR 387
Score = 384 bits (986), Expect = 2e-104
Identities = 215/351 (61%), Positives = 253/351 (72%), Gaps = 8/351 (2%)
Frame = -3
Query: 1485 SSPSHSFSSASAAASDVSSLQVCRKGNNFTVSYLVDSFGFTTKLAESIWRKVSSEAKANP 1306
SS + FS A+ AA S +V RKG +FT SYLVDS G KLAESI RKVS E K NP
Sbjct: 406 SSFFNLFSFATTAAH--LSPRVGRKGKDFTFSYLVDSLGLPKKLAESISRKVSFEDKGNP 463
Query: 1305 DSVLNLLRSHGFTDSQISTVITNYPKLLTLDAEKTLAPNLKFLQSREGASTSELAEIVSN 1126
DSVL+L R GFTDSQIS++I YP+LL LDAEK+L P L+FLQSRE AS+ EL +IVS
Sbjct: 464 DSVLSLFRCQGFTDSQISSMIEIYPRLLILDAEKSLGPKLQFLQSRE-ASSFELTQIVSK 522
Query: 1125 VPRILGMRWHKAVGRYYDFVKDIIEADKCSNYEM---SFPHGTCQENIIRNVLALRRLGV 955
VP ILG + K + YYDF+KD + DK YE SFP G EN IRNV LR LG+
Sbjct: 523 VPEILGKKGDKTISVYYDFIKDTLH-DKSFKYEKLCHSFPPGNL-ENKIRNVSVLRELGM 580
Query: 954 PQRFLFSLLTSNFHVVSGKQRFQESLKKVVGMGFDPTTSKFVRALCVVYQMSHKTTEEKV 775
P + LFSLL S+ V GK++F+ +LKKVV MGFDPTT KFV AL V+Y+M+ KT EE+
Sbjct: 581 PHKLLFSLLISDSQPVCGKEKFEGTLKKVVEMGFDPTTGKFVEALNVIYKMNEKTIEERF 640
Query: 774 NLYRKLGFSTVDVWEIFKKNPLFLALSEKNIMNSFETFIGLGFSRDEFVTMVKHCPQCIG 595
NLY+ LGF DVW FKK P+ L ++EK +++S ETF+GLGFSRDEF MVKH P CIG
Sbjct: 641 NLYKSLGFDAGDVWSSFKKWPISLRVTEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIG 700
Query: 594 LSAESVKKKTEFLVKEMNWSLKALVSNPAVFGYNLEKRTVPRCYVIKALMS 442
LS E VKKKTEFLVK+MNW LKALVSNPAV GY+LEKR VPR V L+S
Sbjct: 701 LSTEMVKKKTEFLVKKMNWPLKALVSNPAVLGYSLEKRIVPRVSVKNMLIS 751
>gi|297840323|ref|XP_002888043.1| hypothetical protein ARALYDRAFT_893283
[Arabidopsis lyrata subsp. lyrata]
Length = 423
Score = 434 bits (1114), Expect = 3e-119
Identities = 244/398 (61%), Positives = 289/398 (72%), Gaps = 12/398 (3%)
Frame = -3
Query: 1485 SSPSHSFSSASAAASDVSSLQVCRKGNNFTVSYLVDSFGFTTKLAESIWRKVSSEAKANP 1306
SS S+SFSSAS A DV SL+ KGN F S LVDS G + S+ +VS K NP
Sbjct: 26 SSFSNSFSSASDA--DV-SLRDGLKGNKFKASCLVDSLGLASNRTTSVSSEVSFTDKVNP 82
Query: 1305 DS-VLNLLRSHGFTDSQISTVITNYPKLLTLDAEKTLAPNLKFLQSREGASTSELAEIVS 1129
DS +LNL RS+GFTDSQIS +I YP+LL D++K+L LKFLQSR GAS+SEL EIVS
Sbjct: 83 DSEILNLFRSYGFTDSQISNIIRTYPRLLIADSQKSLGFKLKFLQSR-GASSSELTEIVS 141
Query: 1128 NVPRILGMRWHKAVGRYYDFVKDIIEADKCSNYEMSFPHGTCQENIIRNVLALRRLGVPQ 949
++P+IL R HK + +YDFVK+II+ DK N SF QEN IRN+ LR LGVP+
Sbjct: 142 SLPKILRKRGHKTLSLFYDFVKEIIQVDKKRNLSQSF----LQENKIRNIFVLRELGVPR 197
Query: 948 RFLFSLLTSNFHVVSGKQRFQESLKKVVGMGFDPTTSKFVRALCVVYQMSHKTTEEKVNL 769
+ L SLL S V G +RF SLKKVV MGFDPTT F++AL +++QMS KT EEK+ +
Sbjct: 198 KRLLSLLISKSQPVCGTERFDASLKKVVEMGFDPTTLMFLQALHMLHQMSDKTIEEKIQV 257
Query: 768 YRKLGFSTVDVWEIFKKNPLFLALSEKNIMNSFETFIGLGFSRDEFVTMVKHCPQCIGLS 589
Y +GF+ DVW +FKK PL L SEK + NS ETF LGFSRD+FV MVK PQCIGLS
Sbjct: 258 YTSVGFTVDDVWAMFKKWPLSLTHSEKKVANSIETFFSLGFSRDDFVRMVKRFPQCIGLS 317
Query: 588 AESVKKKTEFLVKEMNWSLKALVSNPAVFGYNLEKRTVPRCYVIKALMSKGLL---GSEL 418
AE VKKKTEFLVK+MNW LKA+VSNP V GY+LEKRTVPRC VIKALM KGLL GSEL
Sbjct: 318 AELVKKKTEFLVKKMNWPLKAVVSNPTVLGYSLEKRTVPRCNVIKALMLKGLLGDGGSEL 377
Query: 417 PPLSPVLAVTDEAFLTKYVMKHDDDKKLVAELMSIYRA 304
PP+ VLA+TD+AFL +YVMKHDD K+LV ELM+I A
Sbjct: 378 PPMMSVLAITDKAFLNRYVMKHDDHKQLVPELMAILLA 415
>gi|297840341|ref|XP_002888052.1| hypothetical protein ARALYDRAFT_475136
[Arabidopsis lyrata subsp. lyrata]
Length = 414
Score = 430 bits (1105), Expect = 4e-118
Identities = 247/391 (63%), Positives = 292/391 (74%), Gaps = 15/391 (3%)
Frame = -3
Query: 1476 SHSFSSASAAASDVSSLQVCRKGNNFTVSYLVDSFGFTTKLAESIWRKVSSEAKANPDSV 1297
S+SFS SAAA+DV S + RKG NFTVSYLVDS GFTTKLAESI RKV KANPDSV
Sbjct: 31 SNSFS--SAAAADVRS-RDGRKGKNFTVSYLVDSLGFTTKLAESISRKVHFTDKANPDSV 87
Query: 1296 LNLLRSHGFTDSQISTVITNYPKLLTLDAEKTLAPNLKFLQSREGASTSELAEIVSNVPR 1117
L+LLRSHGF DSQIS +IT+YP+LL LDAEK+L L+ LQSR GAS+SEL EIVS VPR
Sbjct: 88 LSLLRSHGFIDSQISCIITDYPELLILDAEKSLGRKLQILQSR-GASSSELTEIVSTVPR 146
Query: 1116 ILGMRWHKAVGRYYDFVKDIIEADKCSNYEMSFPHGTCQENIIRNVLALRRLGVPQRFLF 937
ILG K++ YYD VK+II ADK S+YE+ P G+ Q N IRNV LR+LG+PQ L
Sbjct: 147 ILG---RKSITVYYDAVKEIIVADKSSSYEL--PRGS-QGNKIRNVSVLRQLGMPQWLLL 200
Query: 936 SLLTSNFHVVSGKQRFQESLKKVVGMGFDPTTSKFVRALCVVYQMSHKTTEEKVNLYRKL 757
LL S V GK+ F+ESLKKVV MGFDPTTSKFV AL ++YQMS KT EEKV +Y +
Sbjct: 201 PLLVSKSQPVCGKENFEESLKKVVEMGFDPTTSKFVVALRMLYQMSEKTIEEKVVVYTSV 260
Query: 756 GFSTVDVWEIFKKNPLFLALSEKNIMNSFETFIGLGFSRDEFVTMVKHCPQCIGLSAESV 577
GF+ DVWEIFKK P L +S+K I+ S ETF+ LGFSR EF+ MVK P CI S ESV
Sbjct: 261 GFTLDDVWEIFKKTPSVLKVSKKKILKSAETFLALGFSRAEFLMMVKRYPPCIEYSLESV 320
Query: 576 KKKTEFLVKEMNWSLKALVSNPAVFGYNLEKRTVPRCYVIKALMSKGLL--GSELPPLSP 403
K+K EFLVK+MNW L ALV +P VFGY++EKR +PRC V+K L+SKGLL SELP +S
Sbjct: 321 KRKNEFLVKKMNWPLNALVLHPQVFGYSMEKRIIPRCNVLKVLLSKGLLRKKSELPAVSS 380
Query: 402 VLAVTDEAFLTKYVMKHDDDKKLVAELMSIY 310
VL+ TDE FL +YVMKH++ L LM+I+
Sbjct: 381 VLSCTDEGFLNRYVMKHNE---LAPTLMAIF 408
>gi|15220666|ref|NP_176390.1| Mitochondrial transcription termination factor
family protein [Arabidopsis thaliana]
Length = 414
Score = 421 bits (1082), Expect = 2e-115
Identities = 241/391 (61%), Positives = 288/391 (73%), Gaps = 15/391 (3%)
Frame = -3
Query: 1476 SHSFSSASAAASDVSSLQVCRKGNNFTVSYLVDSFGFTTKLAESIWRKVSSEAKANPDSV 1297
S+SFSSA AA DV S++ RKG NFTVSYLVDS G + KLAESI RKVS E K NPDSV
Sbjct: 31 SNSFSSARAA--DV-SIRDGRKGKNFTVSYLVDSLGLSKKLAESISRKVSFEDKVNPDSV 87
Query: 1296 LNLLRSHGFTDSQISTVITNYPKLLTLDAEKTLAPNLKFLQSREGASTSELAEIVSNVPR 1117
L+L RS+GFTDSQIST+IT+YP LL DA+K L L+ LQSR GAS+SE+ EIVS VPR
Sbjct: 88 LSLFRSYGFTDSQISTIITDYPLLLVADAKKALGRKLQILQSR-GASSSEITEIVSTVPR 146
Query: 1116 ILGMRWHKAVGRYYDFVKDIIEADKCSNYEMSFPHGTCQENIIRNVLALRRLGVPQRFLF 937
ILG K++ YYD VKDII AD S+YE+ P G+ Q N IRNV ALR LG+P R L
Sbjct: 147 ILG---KKSITVYYDAVKDIIVADTSSSYEL--PQGS-QGNKIRNVSALRELGMPSRLLL 200
Query: 936 SLLTSNFHVVSGKQRFQESLKKVVGMGFDPTTSKFVRALCVVYQMSHKTTEEKVNLYRKL 757
LL S V GK+ F SLKKVV MGFDPTT+KFV AL ++YQMS KT EEKV ++R L
Sbjct: 201 PLLVSKSQPVCGKENFDASLKKVVEMGFDPTTTKFVLALRMLYQMSEKTIEEKVVVFRSL 260
Query: 756 GFSTVDVWEIFKKNPLFLALSEKNIMNSFETFIGLGFSRDEFVTMVKHCPQCIGLSAESV 577
GF+ DVWEIFKK P L +S+K I+ S ETF+ LG+SR EF+ MVK P CI S ESV
Sbjct: 261 GFTVDDVWEIFKKTPSVLKVSKKKILKSAETFLDLGYSRAEFLMMVKRYPPCIEYSVESV 320
Query: 576 KKKTEFLVKEMNWSLKALVSNPAVFGYNLEKRTVPRCYVIKALMSKGLL--GSELPPLSP 403
KKK EFLVK+M W ALV +P VFGY++EKR +PRC +++AL+SKGLL GSELP +S
Sbjct: 321 KKKNEFLVKKMKWPRNALVLHPQVFGYSMEKRIIPRCNILEALLSKGLLRKGSELPAVSS 380
Query: 402 VLAVTDEAFLTKYVMKHDDDKKLVAELMSIY 310
VL+ TDE FL +YVMKH++ LV LM+I+
Sbjct: 381 VLSCTDEGFLDRYVMKHNE---LVPTLMAIF 408
>gi|15220672|ref|NP_176392.1| Mitochondrial transcription termination factor
family protein [Arabidopsis thaliana]
Length = 415
Score = 389 bits (997), Expect = 1e-105
Identities = 210/336 (62%), Positives = 248/336 (73%), Gaps = 3/336 (0%)
Frame = -3
Query: 1317 KANPDSVLNLLRSHGFTDSQISTVITNYPKLLTLDAEKTLAPNLKFLQSREGASTSELAE 1138
K N DSVL+LLRS+GFTDSQIS++I + ++L + +L L+FLQSR GAS+SEL E
Sbjct: 67 KGNSDSVLDLLRSYGFTDSQISSIIRSDSRVLIDNDATSLGSKLQFLQSR-GASSSELTE 125
Query: 1137 IVSNVPRILGMRWHKAVGRYYDFVKDIIEADKCSNYEMSFPHGTCQENIIRNVLALRRLG 958
+VS VP+ILG R K++ RYYDF+K IIEADK S YE H Q N IRN+L LR LG
Sbjct: 126 VVSTVPKILGKREGKSLSRYYDFIKVIIEADKSSKYE-KISHSLAQGNKIRNILVLRELG 184
Query: 957 VPQRFLFSLLTSNFHVVSGKQRFQESLKKVVGMGFDPTTSKFVRALCVVYQMSHKTTEEK 778
VPQ+ L LL S V GK++F SLKKVV MGFDPTTS FV AL ++YQMS KT EEK
Sbjct: 185 VPQKRLLLLLISKSQPVCGKEKFDASLKKVVEMGFDPTTSTFVHALHMLYQMSDKTIEEK 244
Query: 777 VNLYRKLGFSTVDVWEIFKKNPLFLALSEKNIMNSFETFIGLGFSRDEFVTMVKHCPQCI 598
+ +YR +GFS DVW +FKK P L SEK + NS ETF+GLGFSRD F+ M K P CI
Sbjct: 245 IRVYRSVGFSVDDVWAMFKKWPRSLTHSEKKVANSIETFLGLGFSRDVFMMMFKRFPPCI 304
Query: 597 GLSAESVKKKTEFLVKEMNWSLKALVSNPAVFGYNLEKRTVPRCYVIKALMSKGLLGSEL 418
G S E+VKKKTEFLVKEMNW +KA+ S P V GY+LEKRTVPRC VIK LMSKGLL SEL
Sbjct: 305 GYSTEAVKKKTEFLVKEMNWPVKAVASIPQVLGYSLEKRTVPRCNVIKVLMSKGLLESEL 364
Query: 417 PPLSPVLAVTDEAFLTKYVMKHDDDKKLVAELMSIY 310
PP+S VL T E+FL YV KH DDK+LVAELM+I+
Sbjct: 365 PPMSSVLTSTSESFLNLYVSKH-DDKQLVAELMAIF 399
>gi|15220717|ref|NP_176406.1| Mitochondrial transcription termination factor
family protein [Arabidopsis thaliana]
Length = 463
Score = 352 bits (903), Expect = 1e-094
Identities = 205/387 (52%), Positives = 252/387 (65%), Gaps = 22/387 (5%)
Frame = -3
Query: 1581 HGRKSLEFQKWRLLRSVVNLLQIESAFPPIIFSSPSHSFSSASAAASDVSSLQVCRKGNN 1402
HG++ ++FQK R V LLQ +FS S+SFSS A A+DV S + RKGNN
Sbjct: 8 HGKRLVQFQKGRDFSVSVKLLQ-------NVFSVFSNSFSSV-ATAADV-SFRDSRKGNN 58
Query: 1401 FTVSYLVDSFGFTTKLAESIWRKVSSEAKANPDSVLNLLRSHGFTDSQISTVITNYPKLL 1222
FTVSYLVDS G +KLAESI KVS E K NPD+VLNLLRSH FTDSQIS++I++YP LL
Sbjct: 59 FTVSYLVDSLGLASKLAESISMKVSFENKGNPDTVLNLLRSHEFTDSQISSIISDYPTLL 118
Query: 1221 TLDAEKTLAPNLKFLQSREGASTSELAEIVSNVPRILGMRWHKAVGRYYDFVKDIIEADK 1042
DAE +L P L +QSR GAS+SEL EIVS VP+ILGM+ K++GRYYD VK+IIEADK
Sbjct: 119 VADAENSLGPKLLLMQSR-GASSSELTEIVSKVPKILGMKGDKSIGRYYDIVKEIIEADK 177
Query: 1041 CSNYEM---SFPHGTCQENIIRNVLALRRLGVPQRFLFSLLTSNFHVVSGKQRFQESLKK 871
S +E S P G+ QEN IRNVL LR LGVPQR LFSLL SN HV GK++F+ESL K
Sbjct: 178 SSKFEKLCHSLPEGSKQENKIRNVLVLRDLGVPQRLLFSLLFSNHHVCCGKEKFEESLNK 237
Query: 870 VVGMGFDPTTSKFVRALCVVYQMSHKTTEEKVNLYRKLGFSTVDVWEIFKKNPLFLALSE 691
VVGMGFDPTT KFV ALC+VY +S K EE N+Y++ G + DVWE+FKK P FL SE
Sbjct: 238 VVGMGFDPTTPKFVEALCIVYGLSDKRLEENFNVYKRFGLTVNDVWELFKKCPAFLGYSE 297
Query: 690 KNIMNSFETFIGLGFSRDEFVTMVKHCPQCIGLSAESVKKKTE------FLVKEMNWSLK 529
I+ +FE G DE +++ K P C+ S + + E F E +K
Sbjct: 298 NRIIQTFEALKRCGLCEDEVLSVFKKNPLCLRASEQQILNSMETFIGLGFSRDEFVMMVK 357
Query: 528 ALVSNPAVFGYNLEKRTVPRCYVIKAL 448
L P GY+ E +V+K +
Sbjct: 358 CL---PQCIGYSAEMVKKKTEFVVKKM 381
Score = 200 bits (508), Expect = 6e-049
Identities = 130/339 (38%), Positives = 193/339 (56%), Gaps = 21/339 (6%)
Frame = -3
Query: 1296 LNLLRSHGFTDSQISTVITNYPKLLTLDAEKTLAPNLKFLQS-REGASTSELAEIVSNVP 1120
L L++S G + S+++ +++ PK+L + +K++ ++ E +S+ ++ ++P
Sbjct: 130 LLLMQSRGASSSELTEIVSKVPKILGMKGDKSIGRYYDIVKEIIEADKSSKFEKLCHSLP 189
Query: 1119 RILGMRWHKAVGRYYDFVKDIIEADKCSNYEMSFPHGTC-----QENIIRNVLALRRLGV 955
G + + R ++D+ + + H C E + V+ +
Sbjct: 190 E--GSKQENKI-RNVLVLRDLGVPQRLLFSLLFSNHHVCCGKEKFEESLNKVVGMGFDPT 246
Query: 954 PQRFLFSLLTSNFHVVSG--KQRFQESLK--KVVGMGFDPTTSKFVRALCVVYQMSHKTT 787
+F+ +L +V G +R +E+ K G+ + F + + S
Sbjct: 247 TPKFVEALC-----IVYGLSDKRLEENFNVYKRFGLTVNDVWELFKKCPAFL-GYSENRI 300
Query: 786 EEKVNLYRKLGFSTVDVWEIFKKNPLFLALSEKNIMNSFETFIGLGFSRDEFVTMVKHCP 607
+ ++ G +V +FKKNPL L SE+ I+NS ETFIGLGFSRDEFV MVK P
Sbjct: 301 IQTFEALKRCGLCEDEVLSVFKKNPLCLRASEQQILNSMETFIGLGFSRDEFVMMVKCLP 360
Query: 606 QCIGLSAESVKKKTEFLVKEMNWSLKALVSNPAVFGYNLEKRTVPRCYVIKALMSKGLLG 427
QCIG SAE VKKKTEF+VK+MNW LK + P V GY++EKRTVPRC VIKALMSKGLLG
Sbjct: 361 QCIGYSAEMVKKKTEFVVKKMNWPLKVITLFPQVLGYSMEKRTVPRCNVIKALMSKGLLG 420
Query: 426 SELPPLSPVLAVTDEAFLTKYVMKHDDDKKLVAELMSIY 310
SELPP++ VLA TD+ FL +YV++HD+ KLV ELMSI+
Sbjct: 421 SELPPMASVLACTDQTFLKRYVVEHDE--KLVLELMSIF 457
>gi|297837213|ref|XP_002886488.1| hypothetical protein ARALYDRAFT_893270
[Arabidopsis lyrata subsp. lyrata]
Length = 463
Score = 350 bits (896), Expect = 6e-094
Identities = 200/385 (51%), Positives = 252/385 (65%), Gaps = 18/385 (4%)
Frame = -3
Query: 1581 HGRKSLEFQKWRLLRSVVNLLQIESAFPPIIFSSPSHSFSSASAAASDVSSLQVCRKGNN 1402
HG++ ++FQK V L Q +FS+ S+SFSS A++ DV S++ RKGNN
Sbjct: 8 HGKRLVQFQKGHNFSVSVKLFQ-------NVFSAFSNSFSSV-ASSHDV-SIRDGRKGNN 58
Query: 1401 FTVSYLVDSFGFTTKLAESIWRKVSSEAKANPDSVLNLLRSHGFTDSQISTVITNYPKLL 1222
FTVSYL+DS G T KLAESI KV E KANPDSVL+LLRSHGFTDSQIS +IT+YP LL
Sbjct: 59 FTVSYLIDSLGLTKKLAESISIKVRFENKANPDSVLSLLRSHGFTDSQISNIITDYPLLL 118
Query: 1221 TLDAEKTLAPNLKFLQSREGASTSELAEIVSNVPRILGMRWHKAVGRYYDFVKDIIEADK 1042
DAE +L P LK LQSR GAS+SEL EIVS VP+IL M+ K++ RYYD VK+I+EADK
Sbjct: 119 IADAENSLGPKLKLLQSR-GASSSELTEIVSKVPKILAMKGDKSISRYYDIVKEIVEADK 177
Query: 1041 CSNYEM---SFPHGTCQENIIRNVLALRRLGVPQRFLFSLLTSNFHVVSGKQRFQESLKK 871
S +E S P G+ QEN IRNVL LR LGVPQR LFSLL SN HV GK++F+ESL+K
Sbjct: 178 SSKFEKLCHSLPEGSKQENKIRNVLVLRELGVPQRLLFSLLISNHHVCCGKEKFEESLEK 237
Query: 870 VVGMGFDPTTSKFVRALCVVYQMSHKTTEEKVNLYRKLGFSTVDVWEIFKKNPLFLALSE 691
VVGMGFDPTT KFV ALC+VY +S K EE N+Y++ G + D+WE+FKK P FL SE
Sbjct: 238 VVGMGFDPTTPKFVEALCIVYGLSDKRLEENFNVYKRFGLTVNDIWELFKKCPAFLGYSE 297
Query: 690 KNIMNSFETFIGLGFSRDEFVTMVKHCPQCIGLSAESVKKKTEFLVKEMNWSLKALVSN- 514
I+ +FE G DE +++ K P C+ S + + E + + +S V
Sbjct: 298 NRIIQTFEALKRCGLCEDEVMSVFKKNPLCLRASEQQILNSMETFI-GLGFSRDEFVMMV 356
Query: 513 ---PAVFGYNLEKRTVPRCYVIKAL 448
P GY+ E +V+K +
Sbjct: 357 KRFPQCIGYSAEMVKKKTEFVVKKM 381
Score = 198 bits (501), Expect = 4e-048
Identities = 126/337 (37%), Positives = 186/337 (55%), Gaps = 17/337 (5%)
Frame = -3
Query: 1296 LNLLRSHGFTDSQISTVITNYPKLLTLDAEKTLAPNLKFLQS-REGASTSELAEIVSNVP 1120
L LL+S G + S+++ +++ PK+L + +K+++ ++ E +S+ ++ ++P
Sbjct: 130 LKLLQSRGASSSELTEIVSKVPKILAMKGDKSISRYYDIVKEIVEADKSSKFEKLCHSLP 189
Query: 1119 RILGMRWHKAVGRYYDFVKDIIEADKCSNYEMSFPHGTCQ----ENIIRNVLALRRLGVP 952
G + + + + + +S H C E + V+ +
Sbjct: 190 E--GSKQENKIRNVLVLRELGVPQRLLFSLLISNHHVCCGKEKFEESLEKVVGMGFDPTT 247
Query: 951 QRFLFSLLTSNFHVVSG--KQRFQESLKKVVGMGFDPTTSKFVRALCVVY-QMSHKTTEE 781
+F+ +L +V G +R +E+ G + C + S +
Sbjct: 248 PKFVEALC-----IVYGLSDKRLEENFNVYKRFGLTVNDIWELFKKCPAFLGYSENRIIQ 302
Query: 780 KVNLYRKLGFSTVDVWEIFKKNPLFLALSEKNIMNSFETFIGLGFSRDEFVTMVKHCPQC 601
++ G +V +FKKNPL L SE+ I+NS ETFIGLGFSRDEFV MVK PQC
Sbjct: 303 TFEALKRCGLCEDEVMSVFKKNPLCLRASEQQILNSMETFIGLGFSRDEFVMMVKRFPQC 362
Query: 600 IGLSAESVKKKTEFLVKEMNWSLKALVSNPAVFGYNLEKRTVPRCYVIKALMSKGLLGSE 421
IG SAE VKKKTEF+VK+MNW LK + P V GY++EKR VPRC VIKALMSKG LGSE
Sbjct: 363 IGYSAEMVKKKTEFVVKKMNWPLKVITLFPQVLGYSMEKRIVPRCNVIKALMSKGSLGSE 422
Query: 420 LPPLSPVLAVTDEAFLTKYVMKHDDDKKLVAELMSIY 310
LPP+ VLA TD+ FL +YV++HD+ KLV ELM+I+
Sbjct: 423 LPPMPSVLACTDQTFLNRYVVEHDE--KLVLELMAIF 457
>gi|297840327|ref|XP_002888045.1| hypothetical protein ARALYDRAFT_338172
[Arabidopsis lyrata subsp. lyrata]
Length = 351
Score = 310 bits (794), Expect = 4e-082
Identities = 167/270 (61%), Positives = 199/270 (73%), Gaps = 2/270 (0%)
Frame = -3
Query: 1320 AKANPDSVLNLLRSHGFTDSQISTVITNYPKLLTLDAEKTLAPNLKFLQSREGASTSELA 1141
+K N DSVL+LLRS+GFTDSQIS++I + P++L ++ +L L+FLQSR GAS+SEL
Sbjct: 70 SKVNADSVLDLLRSYGFTDSQISSIIRSDPQVLIANSATSLGSKLEFLQSR-GASSSELT 128
Query: 1140 EIVSNVPRILGMRWHKAVGRYYDFVKDIIEADKCSNYEMSFPHGTCQENIIRNVLALRRL 961
EIVS VP+ILG R K++ RYYDF+K IIEADK S Y + H Q N IRNVL LR L
Sbjct: 129 EIVSTVPKILGKRAGKSISRYYDFIKVIIEADKSSKY-VKLSHSLPQGNKIRNVLVLRDL 187
Query: 960 GVPQRFLFSLLTSNFHVVSGKQRFQESLKKVVGMGFDPTTSKFVRALCVVYQMSHKTTEE 781
GVP++ L SLL S F V GK+ F SLKKVV MGFDPTTS FV AL ++YQMS KT EE
Sbjct: 188 GVPRKRLLSLLISKFQPVCGKENFDASLKKVVEMGFDPTTSTFVHALHMLYQMSDKTIEE 247
Query: 780 KVNLYRKLGFSTVDVWEIFKKNPLFLALSEKNIMNSFETFIGLGFSRDEFVTMVKHCPQC 601
KV +YR +GF+ DVW +FKK P L SEK + NS ETF+GLGFSRDEF+ M K PQC
Sbjct: 248 KVEVYRSIGFTVDDVWAMFKKWPRSLRHSEKKVANSVETFLGLGFSRDEFLMMFKRFPQC 307
Query: 600 IGLSAESVKKKTEFLVKEMNWSLKALVSNP 511
IG S E VKKKTEFLVKEMNW +KA+ S P
Sbjct: 308 IGYSTELVKKKTEFLVKEMNWPVKAVASVP 337
>gi|2160140|gb|AAB60762.1| F19K23.9 gene product [Arabidopsis thaliana]
Length = 448
Score = 303 bits (774), Expect = 9e-080
Identities = 168/314 (53%), Positives = 207/314 (65%), Gaps = 13/314 (4%)
Frame = -3
Query: 1362 TKLAESIWRKVSSEAKANPDSVLNLLRSHGFTDSQISTVITNYPKLLTLDAEKTLAPNLK 1183
+KLAESI KVS E K NPD+VLNLLRSH FTDSQIS++I++YP LL DAE +L P L
Sbjct: 57 SKLAESISMKVSFENKGNPDTVLNLLRSHEFTDSQISSIISDYPTLLVADAENSLGPKLL 116
Query: 1182 FLQSREGASTSELAEIVSNVPRILGMRWHKAVGRYYDFVKDIIEADKCSNYEM---SFPH 1012
+QSR GAS+SEL EIVS VP+ILGM+ K++GRYYD VK+IIEADK S +E S P
Sbjct: 117 LMQSR-GASSSELTEIVSKVPKILGMKGDKSIGRYYDIVKEIIEADKSSKFEKLCHSLPE 175
Query: 1011 GTCQENIIRNVLALRRLGVPQRFLFSLLTSNFHVVSGKQRFQESLKKVVGMGFDPTTSKF 832
G+ QEN IRNVL LR LGVPQR LFSLL SN HV GK++F+ESL KVVGMGFDPTT KF
Sbjct: 176 GSKQENKIRNVLVLRDLGVPQRLLFSLLFSNHHVCCGKEKFEESLNKVVGMGFDPTTPKF 235
Query: 831 VRALCVVYQMSHKTTEEKVNLYRKLGFSTVDVWEIFKKNPLFLALSEKNIMNSFETFIGL 652
V ALC+VY +S K EE N+Y++ G + DVWE+FKK P FL SE I+ +FE
Sbjct: 236 VEALCIVYGLSDKRLEENFNVYKRFGLTVNDVWELFKKCPAFLGYSENRIIQTFEALKRC 295
Query: 651 GFSRDEFVTMVKHCPQCIGLSAESVKKKTE------FLVKEMNWSLKALVSNPAVFGYNL 490
G DE +++ K P C+ S + + E F E +K L P GY+
Sbjct: 296 GLCEDEVLSVFKKNPLCLRASEQQILNSMETFIGLGFSRDEFVMMVKCL---PQCIGYSA 352
Query: 489 EKRTVPRCYVIKAL 448
E +V+K +
Sbjct: 353 EMVKKKTEFVVKKM 366
Score = 200 bits (508), Expect = 6e-049
Identities = 130/339 (38%), Positives = 193/339 (56%), Gaps = 21/339 (6%)
Frame = -3
Query: 1296 LNLLRSHGFTDSQISTVITNYPKLLTLDAEKTLAPNLKFLQS-REGASTSELAEIVSNVP 1120
L L++S G + S+++ +++ PK+L + +K++ ++ E +S+ ++ ++P
Sbjct: 115 LLLMQSRGASSSELTEIVSKVPKILGMKGDKSIGRYYDIVKEIIEADKSSKFEKLCHSLP 174
Query: 1119 RILGMRWHKAVGRYYDFVKDIIEADKCSNYEMSFPHGTC-----QENIIRNVLALRRLGV 955
G + + R ++D+ + + H C E + V+ +
Sbjct: 175 E--GSKQENKI-RNVLVLRDLGVPQRLLFSLLFSNHHVCCGKEKFEESLNKVVGMGFDPT 231
Query: 954 PQRFLFSLLTSNFHVVSG--KQRFQESLK--KVVGMGFDPTTSKFVRALCVVYQMSHKTT 787
+F+ +L +V G +R +E+ K G+ + F + + S
Sbjct: 232 TPKFVEALC-----IVYGLSDKRLEENFNVYKRFGLTVNDVWELFKKCPAFL-GYSENRI 285
Query: 786 EEKVNLYRKLGFSTVDVWEIFKKNPLFLALSEKNIMNSFETFIGLGFSRDEFVTMVKHCP 607
+ ++ G +V +FKKNPL L SE+ I+NS ETFIGLGFSRDEFV MVK P
Sbjct: 286 IQTFEALKRCGLCEDEVLSVFKKNPLCLRASEQQILNSMETFIGLGFSRDEFVMMVKCLP 345
Query: 606 QCIGLSAESVKKKTEFLVKEMNWSLKALVSNPAVFGYNLEKRTVPRCYVIKALMSKGLLG 427
QCIG SAE VKKKTEF+VK+MNW LK + P V GY++EKRTVPRC VIKALMSKGLLG
Sbjct: 346 QCIGYSAEMVKKKTEFVVKKMNWPLKVITLFPQVLGYSMEKRTVPRCNVIKALMSKGLLG 405
Query: 426 SELPPLSPVLAVTDEAFLTKYVMKHDDDKKLVAELMSIY 310
SELPP++ VLA TD+ FL +YV++HD+ KLV ELMSI+
Sbjct: 406 SELPPMASVLACTDQTFLKRYVVEHDE--KLVLELMSIF 442
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 950,258,999,424
Number of Sequences: 15229318
Number of Extensions: 950258999424
Number of Successful Extensions: 281757619
Number of sequences better than 0.0: 0
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