BLASTX 7.6.2
Query= UN08259 /QuerySize=710
(709 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O64644|SAP18_ARATH Histone deacetylase complex subunit SAP18 ... 264 6e-070
sp|Q3T022|SAP18_BOVIN Histone deacetylase complex subunit SAP18 ... 127 8e-029
sp|O00422|SAP18_HUMAN Histone deacetylase complex subunit SAP18 ... 127 8e-029
sp|Q5RDT5|SAP18_PONAB Histone deacetylase complex subunit SAP18 ... 127 8e-029
sp|O55128|SAP18_MOUSE Histone deacetylase complex subunit SAP18 ... 127 1e-028
sp|Q9VEX9|SAP18_DROME Histone deacetylase complex subunit SAP18 ... 114 6e-025
sp|Q09250|SAP18_CAEEL Probable histone deacetylase complex subun... 109 2e-023
>sp|O64644|SAP18_ARATH Histone deacetylase complex subunit SAP18 OS=Arabidopsis
thaliana GN=At2g45640 PE=1 SV=1
Length = 152
Score = 264 bits (673), Expect = 6e-070
Identities = 132/153 (86%), Positives = 141/153 (92%), Gaps = 3/153 (1%)
Frame = -3
Query: 650 AETARRQGGGGRPFPPPPPRGVN-QPPRPKAEPVDREKTCPLLLRVFTKSGGHHTKEDYA 474
AE ARRQ GGGRP PPPPRGVN QPPRPK EPVDREKTCPLLLRVFTKSGGHHT EDYA
Sbjct: 2 AEAARRQ-GGGRPL-PPPPRGVNQQPPRPKPEPVDREKTCPLLLRVFTKSGGHHTSEDYA 59
Query: 473 VRGKEPKDEVQIYTWKDANLRELTDLVKEVSVAARRRDARLSFAFVYPDKNGRFIVRQVG 294
VRGKEPKDEVQIYTWKDA+LRELTDLVKEVSVAARRR+ARLSFAFVYP+ G + VR+VG
Sbjct: 60 VRGKEPKDEVQIYTWKDASLRELTDLVKEVSVAARRRNARLSFAFVYPNNKGGYNVREVG 119
Query: 293 QTMSYPNRKQPDDSKTLADLHFEIGDYLDVAIY 195
+TM+YPNRKQPDDSKTL++L FEIGDYLDVAIY
Sbjct: 120 ETMAYPNRKQPDDSKTLSELPFEIGDYLDVAIY 152
>sp|Q3T022|SAP18_BOVIN Histone deacetylase complex subunit SAP18 OS=Bos taurus
GN=SAP18 PE=2 SV=1
Length = 153
Score = 127 bits (318), Expect = 8e-029
Identities = 66/122 (54%), Positives = 82/122 (67%), Gaps = 3/122 (2%)
Frame = -3
Query: 560 EPVDREKTCPLLLRVFTKSGGHHTKEDYAVRGKEPKDEVQIYTWKDANLRELTDLVKEVS 381
+P+DREKTCPLLLRVFT + G H + D RG P E+QIYTW DA L+ELT LVKEV
Sbjct: 18 KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77
Query: 380 VAARRRDARLSFAFVYPD-KNGRFIVRQVGQTMSYPNRKQPDDSKTLADLHFEIGDYLDV 204
AR++ +FA V+ D K + V+++G TMS RK DDS TL F+IGDYLD+
Sbjct: 78 PEARKKGTHFNFAIVFTDLKRPGYRVKEIGSTMS--GRKGTDDSMTLQSQKFQIGDYLDI 135
Query: 203 AI 198
AI
Sbjct: 136 AI 137
>sp|O00422|SAP18_HUMAN Histone deacetylase complex subunit SAP18 OS=Homo sapiens
GN=SAP18 PE=1 SV=1
Length = 153
Score = 127 bits (318), Expect = 8e-029
Identities = 66/122 (54%), Positives = 82/122 (67%), Gaps = 3/122 (2%)
Frame = -3
Query: 560 EPVDREKTCPLLLRVFTKSGGHHTKEDYAVRGKEPKDEVQIYTWKDANLRELTDLVKEVS 381
+P+DREKTCPLLLRVFT + G H + D RG P E+QIYTW DA L+ELT LVKEV
Sbjct: 18 KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77
Query: 380 VAARRRDARLSFAFVYPD-KNGRFIVRQVGQTMSYPNRKQPDDSKTLADLHFEIGDYLDV 204
AR++ +FA V+ D K + V+++G TMS RK DDS TL F+IGDYLD+
Sbjct: 78 PEARKKGTHFNFAIVFTDVKRPGYRVKEIGSTMS--GRKGTDDSMTLQSQKFQIGDYLDI 135
Query: 203 AI 198
AI
Sbjct: 136 AI 137
>sp|Q5RDT5|SAP18_PONAB Histone deacetylase complex subunit SAP18 OS=Pongo abelii
GN=SAP18 PE=2 SV=1
Length = 153
Score = 127 bits (318), Expect = 8e-029
Identities = 66/122 (54%), Positives = 82/122 (67%), Gaps = 3/122 (2%)
Frame = -3
Query: 560 EPVDREKTCPLLLRVFTKSGGHHTKEDYAVRGKEPKDEVQIYTWKDANLRELTDLVKEVS 381
+P+DREKTCPLLLRVFT + G H + D RG P E+QIYTW DA L+ELT LVKEV
Sbjct: 18 KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77
Query: 380 VAARRRDARLSFAFVYPD-KNGRFIVRQVGQTMSYPNRKQPDDSKTLADLHFEIGDYLDV 204
AR++ +FA V+ D K + V+++G TMS RK DDS TL F+IGDYLD+
Sbjct: 78 PEARKKGTHFNFAIVFTDVKRPGYRVKEIGSTMS--GRKGTDDSMTLQSQKFQIGDYLDI 135
Query: 203 AI 198
AI
Sbjct: 136 AI 137
>sp|O55128|SAP18_MOUSE Histone deacetylase complex subunit SAP18 OS=Mus musculus
GN=Sap18 PE=2 SV=1
Length = 153
Score = 127 bits (317), Expect = 1e-028
Identities = 66/122 (54%), Positives = 82/122 (67%), Gaps = 3/122 (2%)
Frame = -3
Query: 560 EPVDREKTCPLLLRVFTKSGGHHTKEDYAVRGKEPKDEVQIYTWKDANLRELTDLVKEVS 381
+P+DREKTCPLLLRVFT + G H + D RG P E+QIYTW DA L+ELT LVKEV
Sbjct: 18 KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77
Query: 380 VAARRRDARLSFAFVYPD-KNGRFIVRQVGQTMSYPNRKQPDDSKTLADLHFEIGDYLDV 204
AR++ +FA V+ D K + V+++G TMS RK DDS TL F+IGDYLD+
Sbjct: 78 PEARKKGTHFNFAIVFMDLKRPGYRVKEIGSTMS--GRKGTDDSMTLQSQKFQIGDYLDI 135
Query: 203 AI 198
AI
Sbjct: 136 AI 137
>sp|Q9VEX9|SAP18_DROME Histone deacetylase complex subunit SAP18 OS=Drosophila
melanogaster GN=Bin1 PE=1 SV=1
Length = 150
Score = 114 bits (285), Expect = 6e-025
Identities = 57/126 (45%), Positives = 86/126 (68%), Gaps = 4/126 (3%)
Frame = -3
Query: 572 RPKAEPVDREKTCPLLLRVFTKSGGHHTKEDYAVRGKEPKDEVQIYTWKDANLRELTDLV 393
+ + + +DREKTCP+LLRVF +G HH+ +Y + G P +E+QIYTW+DA L ELT LV
Sbjct: 12 KTQVKQIDREKTCPMLLRVFCSTGRHHSVSEY-MFGNVPTNELQIYTWQDATLHELTSLV 70
Query: 392 KEVSVAARRRDARLSFAFVYPD-KNGRFIVRQVGQTMSYPNRKQPDDSKTLADLHFEIGD 216
++V+ R++ FA VYP+ ++ F +R++G T + +K DD+KTLA F IGD
Sbjct: 71 RDVNPDTRKKGTYFDFAVVYPNFRSNHFQMREIGVTCT--GQKGIDDNKTLAQAKFSIGD 128
Query: 215 YLDVAI 198
+LD++I
Sbjct: 129 FLDISI 134
>sp|Q09250|SAP18_CAEEL Probable histone deacetylase complex subunit SAP18
OS=Caenorhabditis elegans GN=C16C10.4 PE=2 SV=1
Length = 166
Score = 109 bits (271), Expect = 2e-023
Identities = 57/124 (45%), Positives = 79/124 (63%), Gaps = 5/124 (4%)
Frame = -3
Query: 560 EPVDREKTCPLLLRVFTKSGGHHTKEDYAVR--GKEPKDEVQIYTWKDANLRELTDLVKE 387
+P+DREK CP+LLRVF + H+ +Y R G P E+Q++TW D +LRELT L+KE
Sbjct: 16 KPLDREKVCPMLLRVFVANNRHNPMSEYNSRNGGSVPPSELQMHTWMDCSLRELTSLIKE 75
Query: 386 VSVAARRRDARLSFAFVYPDKNG-RFIVRQVGQTMSYPNRKQPDDSKTLADLHFEIGDYL 210
V+ ARR+ FA V D+ R+I+R VG T + + DD+KTL FE+GD++
Sbjct: 76 VNPDARRKGTTFDFAIVQADRGSPRYILRDVGNTTN--GERGIDDNKTLQQCKFEVGDFV 133
Query: 209 DVAI 198
DVAI
Sbjct: 134 DVAI 137
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,263,552,948
Number of Sequences: 518415
Number of Extensions: 33263552948
Number of Successful Extensions: 238913225
Number of sequences better than 0.0: 0
|
