BLASTX 7.6.2
Query= UN08269 /QuerySize=1284
(1283 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297851804|ref|XP_002893783.1| predicted protein [Arabidopsis ... 75 2e-011
gi|297847164|ref|XP_002891463.1| hypothetical protein ARALYDRAFT... 62 2e-007
gi|297810423|ref|XP_002873095.1| predicted protein [Arabidopsis ... 60 9e-007
gi|297828670|ref|XP_002882217.1| predicted protein [Arabidopsis ... 59 1e-006
gi|297788311|ref|XP_002862284.1| predicted protein [Arabidopsis ... 59 2e-006
gi|15242768|ref|NP_195968.1| RNA-binding (RRM/RBD/RNP motifs) fa... 59 2e-006
gi|297806867|ref|XP_002871317.1| predicted protein [Arabidopsis ... 57 8e-006
>gi|297851804|ref|XP_002893783.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 276
Score = 75 bits (183), Expect = 2e-011
Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Frame = -3
Query: 1140 NYTNPWVRISVEGFRCCKYVEDEIRIELINLFKSCGRDSRVDFPRE---PLLDRRAFVTL 970
+Y + RI VEG+ + E ++++ L F SCG + + PR+ +L AF+ +
Sbjct: 53 SYCTSFSRICVEGYDTSLH-EYDLKLALRKHFSSCGEITHIYVPRDFERNILKSFAFIHI 111
Query: 969 RAHGDDAHVAKEKALQLNGSNMRGWNALVKIAPEEEDEEYLALSAYREALGDDLLYDKRF 790
G A+EKAL L+GS+ GWN K +P D +Y+ L ++
Sbjct: 112 AGEG-----AEEKALALSGSDAGGWNVFAKSSP--YDGQYVDPGRATAESPRFSLPQRKM 164
Query: 789 MFGISVEGYDTSLREDEVEKALTTHFSSCGEITHVYV 679
+ V GYDTSL E +++ L+ HFSSCGEIT+V +
Sbjct: 165 I----VTGYDTSLPEIDIQIRLSNHFSSCGEITNVMI 197
Score = 66 bits (159), Expect = 1e-008
Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Frame = -3
Query: 780 ISVEGYDTSLREDEVEKALTTHFSSCGEITHVYVDLQYK------FTNIYFSKEEGEASA 619
I VEGYDTSL E +++ AL HFSSCGEITH+YV ++ F I+ + E E A
Sbjct: 61 ICVEGYDTSLHEYDLKLALRKHFSSCGEITHIYVPRDFERNILKSFAFIHIAGEGAEEKA 120
Query: 618 MALDGSQVDGFKI 580
+AL GS G+ +
Sbjct: 121 LALSGSDAGGWNV 133
>gi|297847164|ref|XP_002891463.1| hypothetical protein ARALYDRAFT_474037
[Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 62 bits (148), Expect = 2e-007
Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 13/127 (10%)
Frame = -3
Query: 936 EKALQLNGSNMRGWNALVKIAPEE----EDEEYLALSAYREALGDDLLYDKRFMFGISVE 769
+KAL+ +G + G + IA E E Y S ++ GD D++ +F V+
Sbjct: 349 QKALEFHGRPLLGREIRLDIAQERGERGERPAYTPQSGNYKSGGDG--GDEKKVF---VK 403
Query: 768 GYDTSLREDEVEKALTTHFSSCGEITHVYVDLQYKFTN----IYFSKEEGEASAMALDGS 601
G+D+SL ED++ ALT HFSSCGEI V V + N Y + EG+ A+ L+GS
Sbjct: 404 GFDSSLSEDDIRNALTEHFSSCGEIKSVSVPMDRDTGNSKGIAYVAFSEGKEKALELNGS 463
Query: 600 QVDGFKI 580
+ G+ +
Sbjct: 464 DMGGWSL 470
>gi|297810423|ref|XP_002873095.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 227
Score = 60 bits (143), Expect = 9e-007
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Frame = -3
Query: 780 ISVEGYDTSLREDEVEKALTTHFSSCGEITHVYVDLQYK------FTNIYFSKEEGEASA 619
ISVEGYDT LRE ++ AL HF+SCG+IT +YV YK T ++ ++ E A
Sbjct: 29 ISVEGYDTRLREYTLKLALEKHFASCGKITTIYVPRDYKRGILKSVTFMWIKGDDAEEKA 88
Query: 618 MALDGSQVDGFKITTSLVATTASSYTPLPP 529
+ L G+ V G+ T+LV S + P
Sbjct: 89 LQLSGTDVGGW---TALVKPAPSQKDIMDP 115
>gi|297828670|ref|XP_002882217.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 195
Score = 59 bits (142), Expect = 1e-006
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Frame = -3
Query: 780 ISVEGYDTSLREDEVEKALTTHFSSCGEITHVYVDLQYK------FTNIYFSKEEGEASA 619
I VEGYDTS+ E ++E ALT HFSSCGEI+H+Y+ ++ F + F+ E A
Sbjct: 19 IRVEGYDTSIYEYDLELALTKHFSSCGEISHIYIPRNFEKGILKSFAFVDFATEGAVEKA 78
Query: 618 MALDGSQVDG 589
+ L S V+G
Sbjct: 79 LNLSRSAVEG 88
>gi|297788311|ref|XP_002862284.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 59 bits (141), Expect = 2e-006
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 15/100 (15%)
Frame = -3
Query: 789 MFGISVEGYDTSLREDEVEKALTTHFSSCGEITHVYVDLQ-----YKFTNIYFSKEEGEA 625
+F I V GYDTSL + +V+ L+ HFSSCGE+T+V + Y+F +I +G
Sbjct: 144 LFRIGVTGYDTSLPKIDVQIGLSKHFSSCGEVTNVSIPTDDSGGLYRFASITILGGKGAV 203
Query: 624 -SAMALDGSQVDGFKITTSLVATTASSYTPLPPDETYFGS 508
A+ L G V G+KIT +V LPP + GS
Sbjct: 204 DKALKLSGRNVGGWKITVDMV---------LPPPDMERGS 234
>gi|15242768|ref|NP_195968.1| RNA-binding (RRM/RBD/RNP motifs) family protein
[Arabidopsis thaliana]
Length = 321
Score = 59 bits (140), Expect = 2e-006
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Frame = -3
Query: 780 ISVEGYDTSLREDEVEKALTTHFSSCGEITHVYVDLQYK------FTNIYFSKEEGEASA 619
I VEGYDTSL+E + ALT HF+SCGEIT +YV +K + ++ E E A
Sbjct: 26 ICVEGYDTSLKEYPLRLALTKHFASCGEITQIYVPRDFKKKILKSVSFMWIKGEGAEDKA 85
Query: 618 MALDGSQVDGFKI 580
+ L G+ V G+ +
Sbjct: 86 LQLSGTDVGGWTV 98
Score = 58 bits (139), Expect = 3e-006
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Frame = -3
Query: 780 ISVEGYDTSLREDEVEKALTTHFSSCGEITHVYVDLQYK---FTNIYFSKEEGEAS---A 619
ISVEGYDTSL++ +E L HF SCGEI HVYV Y+ ++ F + EGE + A
Sbjct: 115 ISVEGYDTSLQKYLLELILEKHFDSCGEIRHVYVPTDYERGVLKSVAFLRIEGEGAEDKA 174
Query: 618 MALDGSQVDGFKI 580
+ L G+ V G+ +
Sbjct: 175 LQLSGTDVVGWTV 187
>gi|297806867|ref|XP_002871317.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 313
Score = 57 bits (135), Expect = 8e-006
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = -3
Query: 786 FGISVEGYDTSLREDEVEKALTTHFSSCGEITHVYVDLQYKFTNIYFSKEEGEASAMALD 607
FGISV GYDT L ED+++ AL+ HF SCGE+T + + F IY E A L
Sbjct: 225 FGISVTGYDTLLPEDDLKTALSKHFRSCGEVTDISIRRSSAF--IYIMGEGAGDKATELS 282
Query: 606 GSQV-DGFKITTSLVATTASSYTPLPP 529
GS + G+K+ + + + PP
Sbjct: 283 GSDMGGGWKVVAKVDSVPGEYHDEDPP 309
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 950,258,999,424
Number of Sequences: 15229318
Number of Extensions: 950258999424
Number of Successful Extensions: 281757619
Number of sequences better than 0.0: 0
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