BLASTX 7.6.2
Query= UN08269 /QuerySize=1284
(1283 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G53700.1 | Symbols: | INVOLVED IN: biological... 70 2e-012
TAIR9_protein||AT5G03480.1 | Symbols: | nucleic acid binding / ... 59 8e-009
TAIR9_protein||AT5G03495.1 | Symbols: | nucleotide binding | ch... 56 4e-008
TAIR9_protein||AT1G48920.1 | Symbols: ATNUC-L1, PARL1 | ATNUC-L1... 56 5e-008
TAIR9_protein||AT5G05430.1 | Symbols: | FUNCTIONS IN: molecular... 49 6e-006
>TAIR9_protein||AT5G53700.1 | Symbols: | INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis
thaliana protein match is: nucleic acid binding / nucleotide binding
(TAIR:AT5G03480.1); Has 74 Blast hits to 54 proteins in 11 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 68; Viruses
- 0; Other Eukaryotes - 6 (source: NCBI BLink). |
chr5:21801221-21802546 FORWARD
Length = 252
Score = 70 bits (171), Expect = 2e-012
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 27/201 (13%)
Frame = -3
Query: 1119 RISVEGFRCCKYVEDEIRIELINLFKSCGRDSRVDFPRE---PLLDRRAFVTLRAHGDDA 949
+ISVEG+ + E +++ L F SCG+ +D PR+ +L F+ A ++
Sbjct: 22 KISVEGYDTSVH-EFPLKLALAKHFASCGKIVDIDVPRDFKKRILKSPLFIIFHAKEGES 80
Query: 948 HVAKEKALQLNGSNMRGWNALVKIAPEEEDEEYLALSAYREALGDDLLYDKRFMFGISVE 769
V +KAL+L+G+++ GWN +VK P ++ YR+ G D +R + V+
Sbjct: 81 PV--DKALELSGTDVGGWNVVVKSLPGQQ--------MYRDPGGVDRFKGERTLI---VK 127
Query: 768 GYDT--SLREDEVEKALTTHFSSCGEITHVYVDLQYKFTNIYFSKEEGEA-------SAM 616
YDT +L + +++ L HFSSCGE+T + V L + + SK + A+
Sbjct: 128 VYDTPSTLSKIDLQIGLCKHFSSCGEVTGISV-LVHGNLCCHESKARVDIMGKGCVDKAL 186
Query: 615 ALDGSQVDGFKITTSLVATTA 553
L G DG+KI V A
Sbjct: 187 ELSGRTADGWKIVVYFVVPPA 207
Score = 50 bits (117), Expect = 4e-006
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 9/76 (11%)
Frame = -3
Query: 780 ISVEGYDTSLREDEVEKALTTHFSSCGEITHVYVDLQYKF------TNIYFSKEEGEA-- 625
ISVEGYDTS+ E ++ AL HF+SCG+I + V +K I F +EGE+
Sbjct: 23 ISVEGYDTSVHEFPLKLALAKHFASCGKIVDIDVPRDFKKRILKSPLFIIFHAKEGESPV 82
Query: 624 -SAMALDGSQVDGFKI 580
A+ L G+ V G+ +
Sbjct: 83 DKALELSGTDVGGWNV 98
>TAIR9_protein||AT5G03480.1 | Symbols: | nucleic acid binding / nucleotide
binding | chr5:869208-870855 REVERSE
Length = 322
Score = 59 bits (140), Expect = 8e-009
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Frame = -3
Query: 780 ISVEGYDTSLREDEVEKALTTHFSSCGEITHVYVDLQYK------FTNIYFSKEEGEASA 619
I VEGYDTSL+E + ALT HF+SCGEIT +YV +K + ++ E E A
Sbjct: 26 ICVEGYDTSLKEYPLRLALTKHFASCGEITQIYVPRDFKKKILKSVSFMWIKGEGAEDKA 85
Query: 618 MALDGSQVDGFKI 580
+ L G+ V G+ +
Sbjct: 86 LQLSGTDVGGWTV 98
Score = 58 bits (139), Expect = 1e-008
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Frame = -3
Query: 780 ISVEGYDTSLREDEVEKALTTHFSSCGEITHVYVDLQYK---FTNIYFSKEEGEAS---A 619
ISVEGYDTSL++ +E L HF SCGEI HVYV Y+ ++ F + EGE + A
Sbjct: 115 ISVEGYDTSLQKYLLELILEKHFDSCGEIRHVYVPTDYERGVLKSVAFLRIEGEGAEDKA 174
Query: 618 MALDGSQVDGFKI 580
+ L G+ V G+ +
Sbjct: 175 LQLSGTDVVGWTV 187
>TAIR9_protein||AT5G03495.1 | Symbols: | nucleotide binding |
chr5:873804-875025 REVERSE
Length = 227
Score = 56 bits (134), Expect = 4e-008
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Frame = -3
Query: 780 ISVEGYDTSLREDEVEKALTTHFSSCGEITHVYVDLQYK---FTNIYF---SKEEGEASA 619
ISVEGYDT LRE V+ L HF+SCG+ITH+YV ++ ++ F E GE A
Sbjct: 31 ISVEGYDTRLREYTVKLVLEKHFASCGKITHIYVPRDFERGILKSVAFMCIKGEGGEEKA 90
Query: 618 MALDGSQVDGF 586
+ L G+ G+
Sbjct: 91 LLLSGTDAGGW 101
Score = 50 bits (119), Expect = 2e-006
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 9/88 (10%)
Frame = -3
Query: 1128 PWVRISVEGFRCCKYVEDEIRIELINLFKSCGRDSRVDFPRE---PLLDRRAFVTLRAHG 958
PW +ISVEG+ + E +++ L F SCG+ + + PR+ +L AF+ ++ G
Sbjct: 27 PWTKISVEGYD-TRLREYTVKLVLEKHFASCGKITHIYVPRDFERGILKSVAFMCIKGEG 85
Query: 957 DDAHVAKEKALQLNGSNMRGWNALVKIA 874
+EKAL L+G++ GW A+VK A
Sbjct: 86 -----GEEKALLLSGTDAGGWTAIVKPA 108
Score = 50 bits (118), Expect = 3e-006
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = -3
Query: 780 ISVEGYDTSLREDEVEKALTTHFSSCGEITHVYVDLQYKFTNIYFSKEEGEASAMALDGS 601
+ V GYDT + + +++ AL HFSSCGE+T V V L +IY E E A+ L+G
Sbjct: 130 VRVTGYDTCVPKIDIQMALCEHFSSCGEVTQVVV-LPSGSGSIYLQGERCEDKALQLNGC 188
Query: 600 QVDGFKITTSLV 565
++ G + V
Sbjct: 189 KMGGMNLVVESV 200
>TAIR9_protein||AT1G48920.1 | Symbols: ATNUC-L1, PARL1 | ATNUC-L1; nucleic acid
binding / nucleotide binding | chr1:18098186-18101422 FORWARD
Length = 558
Score = 56 bits (133), Expect = 5e-008
Identities = 52/171 (30%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Frame = -3
Query: 1068 RIELINLFKSCGRDSRVDFPREPLLDRRAFVTLRAHGDDAHVAKE---KALQLNGSNMRG 898
R ++ N FK G V F R + R G + E KAL+ +G + G
Sbjct: 310 RADVENFFKEAGEVVDVRFS-----TNRDDGSFRGFGHVEFASSEEAQKALEFHGRPLLG 364
Query: 897 WNALVKIAPEE----EDEEYLALSAYREALGDDLLYDKRFMFGISVEGYDTSLREDEVEK 730
+ IA E E + S + GD D++ +F V+G+D SL ED+++
Sbjct: 365 REIRLDIAQERGERGERPAFTPQSGNFRSGGDG--GDEKKIF---VKGFDASLSEDDIKN 419
Query: 729 ALTTHFSSCGEITHVYVDLQYKFTN----IYFSKEEGEASAMALDGSQVDG 589
L HFSSCGEI +V V + N Y EG+ A+ L+GS + G
Sbjct: 420 TLREHFSSCGEIKNVSVPIDRDTGNSKGIAYLEFSEGKEKALELNGSDMGG 470
>TAIR9_protein||AT5G05430.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: stem, leaf; EXPRESSED DURING:
LP.04 four leaves visible; BEST Arabidopsis thaliana protein match is:
RNA recognition motif (RRM)-containing protein (TAIR:AT3G09160.1); Has
23 Blast hits to 21 proteins in 1 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr5:1605275-1606703 REVERSE
Length = 159
Score = 49 bits (115), Expect = 6e-006
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = -3
Query: 780 ISVEGYDTSLREDEVEKALTTHFSSCGEITHVYVDLQYKFTNIYFSK 640
I V GYDT L D++ AL HFSSCGEI +Y+ L++ TN ++
Sbjct: 25 IKVTGYDTGLPLDDLYTALAEHFSSCGEIWEIYIPLKFDETNTILNR 71
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,760,199,660
Number of Sequences: 33410
Number of Extensions: 4760199660
Number of Successful Extensions: 173999632
Number of sequences better than 0.0: 0
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