BLASTX 7.6.2
Query= UN08294 /QuerySize=937
(936 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G20225.1 | Symbols: | FUNCTIONS IN: molecular... 376 1e-104
TAIR9_protein||AT1G76020.1 | Symbols: | INVOLVED IN: biological... 302 2e-082
>TAIR9_protein||AT1G20225.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole;
CONTAINS InterPro DOMAIN/s: Thioredoxin-like fold (InterPro:IPR012336);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G76020.1); Has 156 Blast hits to 152 proteins in 51 species:
Archae - 0; Bacteria - 81; Metazoa - 14; Fungi - 6; Plants - 28;
Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). |
chr1:7007966-7009318 REVERSE
Length = 234
Score = 376 bits (965), Expect = 1e-104
Identities = 180/219 (82%), Positives = 197/219 (89%)
Frame = +1
Query: 76 TSVHAQLVPPPRRDGFVYPPGRIIEPDMILIEAYFDPVCPDCGDAWEPLKLAVDHYGSRV 255
T V AQL+PP RRDGF+YPPGR I+ D ILIEAY DPVCPDC DAWEPLKLA+DHYGSRV
Sbjct: 16 TVVQAQLIPPARRDGFLYPPGRKIDRDTILIEAYIDPVCPDCRDAWEPLKLAIDHYGSRV 75
Query: 256 ALVLHLIPLPFHDNAFVVSRALHIVNTLDYNATFGLLEGIFKHQALFYNSQTQFMPRPAV 435
ALVLHLIPLPFHDNAFV SRALHIV+TL+ NATF LLEGIFKHQ LFYNSQTQ M RPAV
Sbjct: 76 ALVLHLIPLPFHDNAFVASRALHIVDTLNANATFNLLEGIFKHQTLFYNSQTQLMSRPAV 135
Query: 436 VDKLVKLGTVTLGSSFHYPLKSGFRNSQSDLATRVSFKYSVSRGVSATPTFYVNGFELPD 615
V++L+KLGTVTLG+S+H PLKSGF NS+SDLATRVSFKYSVSRGVSATPTFYVNGFELP
Sbjct: 136 VEELIKLGTVTLGNSYHSPLKSGFSNSKSDLATRVSFKYSVSRGVSATPTFYVNGFELPG 195
Query: 616 AGSPIDFEGWKNTIDPLVNPREAKIKDTFLSFLTQPSY* 732
AGSP D+EGW++TIDPLV P+E I+DTFLSFLTQPSY*
Sbjct: 196 AGSPKDYEGWRDTIDPLVKPQEVDIRDTFLSFLTQPSY* 234
>TAIR9_protein||AT1G76020.1 | Symbols: | INVOLVED IN: biological_process
unknown; LOCATED IN: cell wall, vacuole; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold
(InterPro:IPR012336); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G20225.1); Has 118 Blast hits to 116 proteins
in 37 species: Archae - 0; Bacteria - 51; Metazoa - 12; Fungi - 4;
Plants - 28; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). |
chr1:28532243-28533542 REVERSE
Length = 226
Score = 302 bits (773), Expect = 2e-082
Identities = 147/216 (68%), Positives = 171/216 (79%), Gaps = 2/216 (0%)
Frame = +1
Query: 64 FTHRTSVHAQLVPPPRRDGFVYPPGRIIEPDMILIEAYFDPVCPDCGDAWEPLKLAVDHY 243
F T V AQLVPP R+DGFVYPPG +PD ILIEAYFDPVCPD D+W PLK A+ HY
Sbjct: 11 FVVETRVQAQLVPPVRQDGFVYPPGHRFDPDTILIEAYFDPVCPDSRDSWPPLKQALHHY 70
Query: 244 GSRVALVLHLIPLPFHDNAFVVSRALHIVNTLDYNATFGLLEGIFKHQALFYNSQTQFMP 423
GSRVAL+LHL+PLP+HDNA+V SRALHIVNT+ NATF LLEG FKHQ+LFYN+QTQ +
Sbjct: 71 GSRVALLLHLLPLPYHDNAYVTSRALHIVNTVHANATFSLLEGFFKHQSLFYNAQTQLLS 130
Query: 424 RPAVVDKLVKLGTVTLGSSFHYPLKSGFRNSQSDLATRVSFKYSVSRGVSATPTFYVNGF 603
RPAVV+K+V+LGTV+LG+S+ LKSGF + +SD ATRVSFKYS SRGV TPTFYVNGF
Sbjct: 131 RPAVVEKIVELGTVSLGNSYQSVLKSGFSDKKSDRATRVSFKYSASRGVYGTPTFYVNGF 190
Query: 604 ELPDAGSPIDFEGWKNTIDPLVNPREAKIKDTFLSF 711
L DA SP +F GWK IDPLV E ++D F+ F
Sbjct: 191 VLSDAASPSNFGGWKKIIDPLVQAHE--MEDNFIPF 224
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,760,199,660
Number of Sequences: 33410
Number of Extensions: 4760199660
Number of Successful Extensions: 173999632
Number of sequences better than 0.0: 0
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